RODEO2

Parameters

Run Time07:13AM on January 25, 2023
Version2.3.3
Gene Window+/-8 CDS
Peptide Range30-300 aa
Fetch Distance25bp
Peptide Type general
Annotation Legend
Appearance Accession/Name

Input Queries (click to navigate)

Results for WP_016088833.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016088841.1 32926 33712 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
8.20E-07
1.60E-05
WP_098885270.1 33731 34967 + 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
4.60E-23
1.30E-05
6.90E-04
WP_016088839.1 35433 35004 - 142NO PFAM MATCH---
WP_206777689.1 35669 36968 + 432PF07992
PF00070
PF02852
PF13738
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_dim
Pyr_redox_3
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyridine nucleotide-disulphide oxidoreductase
HI0933-like protein
1.50E-57
4.00E-20
2.70E-16
3.00E-15
3.00E-08
WP_016133925.1 37070 37559 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
4.90E-09
6.30E-06
6.90E-05
WP_016133926.1 37797 38208 + 136PF13048DUF3908Protein of unknown function (DUF3908)1.90E-51
WP_088083440.1 38831 38240 - 196PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-18
1.50E-17
1.00E-16
4.90E-12
1.70E-11
WP_116363185.1 40465 38923 - 513PF00881NitroreductaseNitroreductase family6.90E-11
WP_016088833.1 42431 40481 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.30E-84
WP_016088832.1 44347 42427 - 639NO PFAM MATCH---
WP_016088831.1 45735 44472 - 420PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
4.00E-81
3.50E-20
5.10E-13
1.70E-04
WP_016088830.1 48734 45866 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.10E-63
5.10E-55
1.60E-36
WP_000428506.1 49556 49766 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_016088829.1 49768 50146 + 125NO PFAM MATCH---
WP_016088828.1 50174 50357 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_016088827.1 50491 50851 + 119NO PFAM MATCH---
WP_001195374.1 50869 51139 + 89NO PFAM MATCH---

Results for WP_016108036.1 [Bacillus toyonensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000397497.1 55143 54309 - 277NO PFAM MATCH---
WP_016108031.1 55344 56130 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.40E-05
3.70E-05
WP_016108032.1 56149 57385 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
5.30E-22
2.70E-06
WP_000332411.1 57854 57431 - 140NO PFAM MATCH---
WP_016108033.1 58053 59388 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
9.00E-63
2.50E-19
8.00E-17
1.90E-15
4.00E-10
WP_016108034.1 59488 59977 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.80E-10
2.00E-07
1.10E-04
WP_000996796.1 60227 60638 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.40E-52
WP_016108035.1 62209 60667 - 513PF00881NitroreductaseNitroreductase family6.10E-13
WP_016108036.1 64174 62224 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-84
WP_016108037.1 66090 64170 - 639NO PFAM MATCH---
WP_000569924.1 67475 66215 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.20E-80
3.40E-20
5.00E-13
1.60E-04
WP_000197133.1 70473 67605 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
7.70E-63
5.00E-55
1.30E-36
WP_000428507.1 71440 71656 + 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.30E-05
7.40E-05
WP_016108038.1 71652 72030 + 125NO PFAM MATCH---
WP_001178305.1 72058 72241 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001034135.1 72376 72739 + 120NO PFAM MATCH---
WP_001193096.1 72756 73026 + 89NO PFAM MATCH---

Results for WP_000191878.1 [Bacillus cereus group sp. BY112LC] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000650065.1 243607 244393 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.40E-05
3.70E-05
WP_001099924.1 244412 245648 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
5.30E-22
2.70E-06
WP_000336278.1 246117 245694 - 140NO PFAM MATCH---
WP_001110250.1 246316 247651 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
4.30E-62
2.50E-19
7.60E-17
2.10E-15
5.60E-10
WP_002135035.1 247727 248217 + 163INFERRED GENE---
WP_000996796.1 248467 248878 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.40E-52
WP_000025730.1 249500 248909 - 196PF13649
PF08241
PF13847
PF01209
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Ubie_methyltran
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
2.20E-18
5.60E-18
3.00E-16
1.80E-12
1.80E-12
WP_270793179.1 251133 249591 - 513PF00881NitroreductaseNitroreductase family4.80E-13
WP_000191878.1 253098 251148 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-85
WP_270793180.1 255014 253094 - 639NO PFAM MATCH---
WP_000569924.1 256399 255139 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.20E-80
3.40E-20
5.00E-13
1.60E-04
WP_270793181.1 259397 256529 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
8.10E-63
5.10E-55
1.30E-36
WP_000428507.1 260364 260580 + 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.30E-05
7.40E-05
WP_001000064.1 260576 260954 + 125NO PFAM MATCH---
WP_001178305.1 260982 261165 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_149889696.1 261300 261663 + 120NO PFAM MATCH---
WP_001193096.1 261680 261950 + 89NO PFAM MATCH---

Results for WP_048560165.1 [Bacillus wiedmannii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048560172.1 36892 37639 + 248PF13419
PF00702
PF12710
PF13242
HAD_2
Hydrolase
HAD
Hydrolase_like
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
2.00E-26
7.10E-16
6.50E-07
6.60E-07
WP_048560186.1 37793 39158 + 454PF00202Aminotran_3Aminotransferase class-III4.10E-135
WP_048560171.1 39273 40641 + 455PF00158
PF14532
PF07728
PF13426
PF08448
Sigma54_activat
Sigma54_activ_2
AAA_5
PAS_9
PAS_4
Sigma-54 interaction domain
Sigma-54 interaction domain
AAA domain (dynein-related subfamily)
PAS domain
PAS fold
6.30E-67
1.10E-20
6.90E-11
3.70E-10
8.00E-09
WP_048560170.1 40633 42085 + 483PF00171AldedhAldehyde dehydrogenase family3.20E-173
WP_000263262.1 42132 42456 + 107PF00893Multi_Drug_ResSmall Multidrug Resistance protein4.00E-24
WP_048560169.1 42920 43148 + 75NO PFAM MATCH---
WP_048560168.1 43208 43559 + 116NO PFAM MATCH---
WP_048560166.1 44090 44900 + 269PF00881NitroreductaseNitroreductase family4.50E-06
WP_048560165.1 44896 45928 + 343PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-09
WP_048560164.1 45951 47025 + 357PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-10
WP_048560163.1 47128 47866 + 245PF01061ABC2_membraneABC-2 type transporter1.60E-04
WP_048560162.1 47888 48584 + 231PF00005
PF13304
PF13476
PF02463
PF13555
ABC_tran
AAA_21
AAA_23
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
1.20E-15
8.00E-15
1.40E-08
1.10E-07
1.00E-05
WP_048560161.1 48771 48996 + 74NO PFAM MATCH---
WP_048560159.1 50935 49705 - 409PF02073Peptidase_M29Thermophilic metalloprotease (M29)5.00E-175
WP_048560158.1 52134 51051 - 360PF01522
PF08481
Polysacc_deac_1
GBS_Bsp-like
Polysaccharide deacetylase
GBS Bsp-like repeat
2.20E-17
2.50E-04
WP_262744109.1 53397 52293 - 367PF01522Polysacc_deac_1Polysaccharide deacetylase3.60E-16
WP_001200508.1 54872 53675 - 398PF07662
PF01773
Nucleos_tra2_C
Nucleos_tra2_N
Na+ dependent nucleoside transporter C-terminus
Na+ dependent nucleoside transporter N-terminus
2.50E-56
1.50E-17

Results for WP_048560164.1 [Bacillus wiedmannii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016133496.1 17349 15972 - 458PF05958
PF13847
PF01938
PF02475
PF13649
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Met_10
Methyltransf_25
tRNA (Uracil-5-)-methyltransferase
Methyltransferase domain
TRAM domain
Met-10+ like-protein
Methyltransferase domain
1.10E-21
4.20E-12
2.40E-11
4.30E-09
8.90E-07
WP_001200508.1 17774 18971 + 398PF07662
PF01773
Nucleos_tra2_C
Nucleos_tra2_N
Na+ dependent nucleoside transporter C-terminus
Na+ dependent nucleoside transporter N-terminus
2.50E-56
1.50E-17
WP_048560157.1 19249 20353 + 367PF01522Polysacc_deac_1Polysaccharide deacetylase3.60E-16
WP_048560158.1 20512 21595 + 360PF01522
PF08481
Polysacc_deac_1
GBS_Bsp-like
Polysaccharide deacetylase
GBS Bsp-like repeat
2.20E-17
2.50E-04
WP_048560159.1 21711 22941 + 409PF02073Peptidase_M29Thermophilic metalloprotease (M29)5.00E-175
WP_048560161.1 23875 23650 - 74NO PFAM MATCH---
WP_048560162.1 24758 24062 - 231PF00005
PF13304
PF13476
PF02463
PF13555
ABC_tran
AAA_21
AAA_23
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
1.20E-15
8.00E-15
1.40E-08
1.10E-07
1.00E-05
WP_048560163.1 25518 24780 - 245PF01061ABC2_membraneABC-2 type transporter1.60E-04
WP_048560164.1 26695 25621 - 357PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-10
WP_048560165.1 27750 26718 - 343PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-09
WP_256490758.1 28556 27746 - 269PF00881NitroreductaseNitroreductase family4.50E-06
WP_048560168.1 29438 29087 - 116NO PFAM MATCH---
WP_048560169.1 29726 29498 - 75NO PFAM MATCH---

Results for WP_000192969.1 [Bacillus thuringiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000424511.1 3270318 3269484 - 277PF11667DUF3267Putative zincin peptidase5.70E-04
WP_000649871.1 3270515 3271301 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
9.30E-05
2.10E-04
WP_017672808.1 3271384 3271545 + 53INFERRED GENE---
WP_000332390.1 3272081 3271649 - 143NO PFAM MATCH---
WP_001110216.1 3272278 3273613 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.50E-63
5.80E-20
8.50E-17
3.30E-15
4.00E-10
WP_000470984.1 3273714 3274206 + 163PF00583
PF13508
PF13673
PF17013
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransf_15
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Putative acetyl-transferase
6.20E-10
1.20E-06
8.10E-05
8.90E-04
WP_000996788.1 3274350 3274761 + 136PF13048DUF3908Protein of unknown function (DUF3908)2.30E-54
WP_001175517.1 3276334 3274792 - 513PF00881NitroreductaseNitroreductase family6.50E-13
WP_000192969.1 3278300 3276350 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-83
WP_000067629.1 3280216 3278296 - 639NO PFAM MATCH---
WP_000569912.1 3281597 3280340 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
4.20E-13
1.70E-04
WP_000197127.1 3284598 3281730 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.10E-55
5.20E-37
WP_000428510.1 3285424 3285634 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_001109889.1 3285636 3286014 + 125NO PFAM MATCH---
WP_001178301.1 3286042 3286225 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001036567.1 3286359 3286716 + 118NO PFAM MATCH---
WP_001195372.1 3286734 3287004 + 89NO PFAM MATCH---

Results for WP_070141331.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_070141324.1 26312 27098 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.70E-05
5.10E-05
WP_098786378.1 27117 28356 + 412PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
4.90E-22
2.70E-04
WP_070141326.1 28822 28399 - 140NO PFAM MATCH---
WP_070141327.1 29021 30356 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
4.40E-61
8.90E-21
4.90E-17
4.80E-15
6.70E-11
WP_070141328.1 30458 30947 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
4.60E-09
1.90E-05
2.80E-04
WP_070141329.1 31248 31659 + 136PF13048DUF3908Protein of unknown function (DUF3908)2.60E-49
WP_002158829.1 31690 32282 + 197INFERRED GENE---
WP_098786379.1 33937 32374 - 520PF00881NitroreductaseNitroreductase family1.00E-12
WP_070141331.1 35909 33959 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-83
WP_070141332.1 37825 35905 - 639NO PFAM MATCH---
WP_070141333.1 39207 37950 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.20E-80
6.10E-20
4.90E-13
1.10E-04
WP_070141334.1 42204 39336 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
4.00E-64
4.50E-55
5.30E-36
WP_070141336.1 43029 43221 + 63PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.20E-17
3.20E-10
8.40E-07
3.00E-05
5.80E-05
WP_070141337.1 43361 43739 + 125NO PFAM MATCH---
WP_002086895.1 43767 43950 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_070141338.1 44082 44445 + 120NO PFAM MATCH---
WP_070141339.1 44485 45031 + 181NO PFAM MATCH---

Results for WP_000193000.1 [Bacillus paramobilis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001195386.1 12689 12419 - 89NO PFAM MATCH---
WP_120449699.1 13067 12707 - 119NO PFAM MATCH---
WP_001178300.1 13375 13192 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_048545076.1 13781 13403 - 125NO PFAM MATCH---
WP_086389278.1 13993 13783 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.50E-17
4.00E-10
1.10E-06
3.10E-05
6.90E-05
WP_000197139.1 14816 17684 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-64
5.00E-55
1.00E-36
WP_000569925.1 17818 19078 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.10E-81
3.40E-20
5.10E-13
1.60E-04
WP_001061545.1 19202 21122 + 639NO PFAM MATCH---
WP_000193000.1 21118 23068 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.50E-84
WP_120449698.1 23084 24626 + 513PF00881NitroreductaseNitroreductase family6.60E-13
WP_098258232.1 24717 25308 + 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
5.40E-17
4.30E-16
1.30E-15
8.20E-11
1.90E-10
WP_000996801.1 25750 25339 - 136PF13048DUF3908Protein of unknown function (DUF3908)4.30E-53
WP_098873031.1 26486 25997 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
2.60E-11
5.50E-07
4.70E-05
WP_098873032.1 27921 26586 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.30E-63
5.70E-20
4.60E-17
2.00E-15
4.50E-11
WP_000332418.1 28120 28549 + 142NO PFAM MATCH---
WP_000650078.1 29463 28677 - 261PF13240
PF12773
PF20214
PF13248
zinc_ribbon_2
DZR
DUF6574
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
Family of unknown function (DUF6574)
zinc-ribbon domain
5.70E-06
1.30E-05
2.50E-05
7.50E-04
WP_000424520.1 29659 30493 + 277PF11667DUF3267Putative zincin peptidase5.10E-04

Results for WP_000615611.1 back to top

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Couldn't process WP_000615611.1 Genbank filestream. May be corrupt.

Results for WP_026591451.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_098302407.1 18900 19584 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.00E-72
WP_090693138.1 20432 19598 - 277PF11667DUF3267Putative zincin peptidase5.00E-04
WP_098302408.1 20708 21968 + 419PF13308
PF13240
PF13248
PF12773
YARHG
zinc_ribbon_2
zf-ribbon_3
DZR
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
Double zinc ribbon
6.80E-22
7.80E-06
2.50E-04
7.20E-04
WP_098302409.1 22579 22144 - 144NO PFAM MATCH---
WP_098302410.1 22941 24276 + 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
1.70E-64
2.90E-20
1.40E-19
7.70E-15
2.10E-10
WP_026591454.1 24459 24870 + 136PF13048DUF3908Protein of unknown function (DUF3908)7.60E-43
WP_026591453.1 25497 24903 - 197PF13847
PF08241
PF13649
PF01209
PF13489
Methyltransf_31
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
2.20E-17
4.90E-17
7.70E-17
1.70E-11
4.60E-11
WP_098302411.1 27179 25613 - 521PF00881NitroreductaseNitroreductase family3.00E-11
WP_026591451.1 29242 27292 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-85
WP_098302412.1 31161 29241 - 639PF00899ThiFThiF family3.50E-04
WP_026591449.1 32570 31310 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.00E-81
1.50E-20
2.20E-12
5.00E-07
WP_098302413.1 35592 32724 - 955PF00676
PF02779
PF16870
PF16078
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2-oxoglutarate dehydrogenase N-terminus
2.20E-64
1.10E-54
9.50E-38
2.50E-04
WP_255259971.1 36487 36610 + 40NO PFAM MATCH---
WP_026591447.1 36716 36920 + 67PF01381
PF12844
PF13560
PF08279
PF04545
HTH_3
HTH_19
HTH_31
HTH_11
Sigma70_r4
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
HTH domain
Sigma-70, region 4
4.10E-17
2.80E-10
7.00E-07
6.90E-05
1.50E-04
WP_026591446.1 36943 37321 + 125NO PFAM MATCH---
WP_026591445.1 37350 37533 + 60PF13121DUF3976Domain of unknown function (DUF3976)2.90E-24
WP_000501815.1 38073 38628 + 185INFERRED GENE---

Results for WP_060489409.1 [Bacillus wiedmannii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012259899.1 1188132 1188691 + 186INFERRED GENE---
WP_189337222.1 1188810 1188627 - 60NO PFAM MATCH---
WP_001178300.1 1189207 1189024 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_075308515.1 1189613 1189235 - 125NO PFAM MATCH---
WP_000428506.1 1189825 1189615 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_060489413.1 1190649 1193517 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.00E-63
3.90E-55
1.90E-36
WP_000569906.1 1193649 1194909 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.10E-81
3.40E-20
5.10E-13
1.70E-04
WP_098815429.1 1195034 1196954 + 639NO PFAM MATCH---
WP_060489409.1 1196950 1198900 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-85
WP_098815430.1 1198916 1200458 + 513PF00881NitroreductaseNitroreductase family1.80E-12
WP_060489405.1 1200899 1200488 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.00E-52
WP_106101352.1 1201687 1201198 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.50E-11
8.70E-07
9.40E-05
WP_079245213.1 1203122 1201787 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
4.10E-64
1.10E-20
4.00E-17
2.10E-15
1.60E-10
WP_088062526.1 1203321 1203750 + 142NO PFAM MATCH---
WP_106101351.1 1205023 1203787 - 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
3.80E-23
1.10E-07
4.30E-04
WP_097857481.1 1205828 1205042 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
4.20E-06
5.60E-06
6.50E-04
WP_046958289.1 1206025 1206859 + 277NO PFAM MATCH---

Results for WP_000191879.1 back to top

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Couldn't process WP_000191879.1 Genbank filestream. May be corrupt.

Results for WP_000191875.1 [Bacillus toyonensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_200203773.1 1201317 1202103 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.40E-05
3.70E-05
WP_200203774.1 1202122 1203358 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
2.20E-21
2.70E-06
WP_000336278.1 1203827 1203404 - 140NO PFAM MATCH---
WP_087949160.1 1204026 1205361 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.60E-62
3.10E-19
6.20E-17
2.20E-15
6.90E-10
WP_002135035.1 1205438 1205925 + 162INFERRED GENE---
WP_000996794.1 1206175 1206586 + 136PF13048DUF3908Protein of unknown function (DUF3908)3.80E-49
WP_000025730.1 1207208 1206617 - 196PF13649
PF08241
PF13847
PF01209
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Ubie_methyltran
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
2.20E-18
5.60E-18
3.00E-16
1.80E-12
1.80E-12
WP_098709999.1 1208841 1207299 - 513PF00881NitroreductaseNitroreductase family6.90E-13
WP_000191875.1 1210806 1208856 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-85
WP_052943558.1 1212722 1210802 - 639NO PFAM MATCH---
WP_200203776.1 1214107 1212847 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.20E-80
3.40E-20
5.00E-13
1.60E-04
WP_087949155.1 1217105 1214237 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
7.00E-63
5.00E-55
1.30E-36
WP_000428507.1 1218072 1218288 + 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.30E-05
7.40E-05
WP_001000065.1 1218284 1218662 + 125NO PFAM MATCH---
WP_001178305.1 1218690 1218873 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001034135.1 1219008 1219371 + 120NO PFAM MATCH---
WP_001193096.1 1219388 1219658 + 89NO PFAM MATCH---

Results for WP_016082417.1 [Bacillus thuringiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016082424.1 1211801 1212587 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.00E-05
1.10E-04
WP_098773477.1 1212606 1213842 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
4.60E-22
2.20E-05
WP_016082422.1 1214311 1213888 - 140NO PFAM MATCH---
WP_016082421.1 1214510 1215845 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.60E-64
1.50E-20
6.20E-17
3.60E-15
4.50E-10
WP_048564899.1 1215944 1216433 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.40E-10
1.60E-05
4.60E-04
WP_000996808.1 1216654 1217065 + 136PF13048DUF3908Protein of unknown function (DUF3908)1.80E-51
WP_016082419.1 1217685 1217094 - 196PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.40E-18
1.20E-17
1.60E-16
7.60E-13
2.20E-12
WP_016082418.1 1219319 1217777 - 513PF00881NitroreductaseNitroreductase family2.80E-12
WP_016082417.1 1221284 1219334 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-83
WP_263042745.1 1223200 1221280 - 639NO PFAM MATCH---
WP_000569893.1 1224584 1223324 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.80E-81
3.40E-20
5.00E-13
1.70E-04
WP_016082415.1 1227584 1224716 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.80E-63
3.40E-55
1.60E-36
WP_000428506.1 1228407 1228617 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_001109912.1 1228619 1228997 + 125NO PFAM MATCH---
WP_001178297.1 1229025 1229208 + 60PF13121DUF3976Domain of unknown function (DUF3976)4.60E-29
WP_001036573.1 1229338 1229701 + 121INFERRED GENE---
WP_016082412.1 1229717 1229987 + 89NO PFAM MATCH---

Results for WP_004235817.1 back to top

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Couldn't process WP_004235817.1 Genbank filestream. May be corrupt.

Results for WP_036015165.1 [Budvicia aquatica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006819309.1 4820479 4820765 + 95INFERRED GENE---
WP_029093527.1 4822508 4820825 - 560PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.70E-95
1.20E-11
2.70E-06
WP_029093528.1 4823328 4822650 - 225PF02224
PF13189
PF13207
PF13238
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_18
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
3.60E-79
7.40E-08
2.40E-06
1.60E-05
1.70E-04
WP_029093529.1 4824857 4823570 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-149
WP_029093530.1 4825635 4824939 - 231PF01177Asp_Glu_raceAsp/Glu/Hydantoin racemase6.20E-42
WP_029093531.1 4826775 4825689 - 361PF00266Aminotran_5Aminotransferase class-V1.50E-60
WP_051323204.1 4827727 4827040 - 228PF09601DUF2459Protein of unknown function (DUF2459)2.70E-46
WP_000394115.1 4827834 4828885 + 350INFERRED GENE---
WP_036015165.1 4829096 4830848 + 583PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.90E-78
5.00E-62
WP_029093534.1 4831221 4832073 + 283PF01226Form_Nir_transFormate/nitrite transporter8.80E-70
WP_029093535.1 4832135 4834418 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-206
2.40E-43
WP_029093536.1 4834679 4835420 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-30
2.40E-19
1.90E-06
WP_174768730.1 4835575 4835791 + 71NO PFAM MATCH---
WP_134531468.1 4835970 4836195 + 74PF08695Coa1Cytochrome oxidase complex assembly protein 12.20E-10
E4W33_RS22400 4836414 4836615 + 67INFERRED GENE---
WP_029093538.1 4837773 4836627 - 381PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
2.80E-27
1.20E-05
1.40E-04
2.80E-04
WP_029093539.1 4838590 4838035 - 184PF12837
PF00037
PF13187
PF12838
PF13484
Fer4_6
Fer4
Fer4_9
Fer4_7
Fer4_16
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S double cluster binding domain
9.60E-16
1.20E-14
3.50E-14
1.80E-13
1.40E-11

Results for WP_015635456.1 [Pseudomonas protegens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_258718483.1 3177885 3177003 - 293PF00144Beta-lactamaseBeta-lactamase7.90E-36
WP_041117962.1 3178039 3178570 + 176NO PFAM MATCH---
WP_258718484.1 3180522 3178809 - 570PF01425AmidaseAmidase1.20E-55
WP_015635452.1 3181357 3180736 - 206PF10544T5orf172T5orf172 domain4.00E-06
WP_053158230.1 3181852 3181411 - 146NO PFAM MATCH---
WP_053158234.1 3182838 3181872 - 321PF05076SUFUSuppressor of fused protein (SUFU)6.70E-06
WP_015635455.1 3182907 3183267 + 119NO PFAM MATCH---
WP_011061074.1 3183341 3183779 + 145NO PFAM MATCH---
WP_015635456.1 3186108 3183888 - 739PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.30E-74
6.00E-73
5.90E-08
WP_011061076.1 3187767 3186258 - 502PF04820
PF01494
PF13450
PF01266
PF00890
Trp_halogenase
FAD_binding_3
NAD_binding_8
DAO
FAD_binding_2
Tryptophan halogenase
FAD binding domain
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
FAD binding domain
9.80E-12
2.50E-06
1.70E-05
5.90E-05
1.30E-04
WP_011061077.1 3188795 3187763 - 343PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.20E-30
4.90E-12
WP_011061078.1 3189280 3189547 + 88PF00550PP-bindingPhosphopantetheine attachment site3.70E-06
WP_210482147.1 3189560 3190910 + 449PF04820
PF01494
PF07992
PF01266
PF05834
Trp_halogenase
FAD_binding_3
Pyr_redox_2
DAO
Lycopene_cycl
Tryptophan halogenase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
Lycopene cyclase protein
7.70E-31
2.10E-16
1.80E-08
4.10E-08
7.00E-07
WP_258718485.1 3190941 3198318 + 2458PF00109
PF02801
PF00698
PF16197
PF00550
ketoacyl-synt
Ketoacyl-synt_C
Acyl_transf_1
KAsynt_C_assoc
PP-binding
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
Acyl transferase domain
Ketoacyl-synthetase C-terminal extension
Phosphopantetheine attachment site
5.20E-162
6.60E-80
9.50E-69
8.00E-31
4.20E-25
WP_258718486.1 3198366 3203691 + 1774PF00109
PF08659
PF00698
PF02801
PF16197
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
KAsynt_C_assoc
Beta-ketoacyl synthase, N-terminal domain
KR domain
Acyl transferase domain
Beta-ketoacyl synthase, C-terminal domain
Ketoacyl-synthetase C-terminal extension
3.40E-85
8.80E-57
2.90E-51
2.90E-38
3.80E-18
WP_015635459.1 3203741 3205376 + 544NO PFAM MATCH---
WP_174394778.1 3205377 3206520 + 380PF00441
PF02770
PF02771
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-39
1.80E-20
4.60E-19
1.40E-14

Results for WP_032280640.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032280638.1 28516 29380 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)8.40E-122
WP_000165876.1 30042 29415 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_032280639.1 30356 31505 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
9.30E-26
2.60E-09
8.00E-06
WP_000918506.1 31714 33145 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
6.50E-28
1.10E-12
NP_415420.1 33145 33256 + 37INFERRED GENE---
WP_000111043.1 34095 33354 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292812.1 36569 34286 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000642546.1 37481 36623 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_032280640.1 39647 37886 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-83
6.30E-67
WP_000642852.1 39776 40469 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 40667 41756 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_032280641.1 41826 43110 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.30E-150
WP_001295345.1 43278 44043 + 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000125016.1 44215 44899 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 45009 46683 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 46842 47127 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
NP_309023.2 47333 49584 + 750INFERRED GENE---

Results for WP_027593622.1 [Pseudomonas sp. PAGU 2196] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_238213138.1 16613 17894 + 426PF03573OprDouter membrane porin, OprD family2.00E-127
WP_238213153.1 18050 19013 + 320PF07859
PF20434
PF10340
Abhydrolase_3
BD-FAE
Say1_Mug180
alpha/beta hydrolase fold
BD-FAE
Steryl acetyl hydrolase
2.90E-58
2.50E-11
6.80E-05
WP_238213155.1 19151 19970 + 272PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.70E-26
WP_238214379.1 20543 19973 - 189PF12804
PF09837
NTP_transf_3
DUF2064
MobA-like NTP transferase domain
Uncharacterized protein conserved in bacteria (DUF2064)
1.00E-33
6.00E-04
WP_238213158.1 21568 20539 - 342PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
8.50E-36
1.60E-23
WP_238213160.1 22949 21602 - 448PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
3.30E-23
9.70E-22
WP_238213162.1 25225 22966 - 752PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
3.80E-32
2.10E-30
WP_027593623.1 25683 25224 - 152PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.10E-22
4.30E-08
5.90E-05
WP_027593622.1 25936 28123 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-73
2.60E-71
3.90E-08
WP_238213164.1 28383 29196 + 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
6.50E-21
2.60E-20
8.00E-15
2.90E-13
2.50E-07
WP_085274366.1 29513 29213 - 99PF13827DUF4189Domain of unknown function (DUF4189)1.90E-04
WP_238214381.1 29759 30134 + 124PF09990DUF2231Predicted membrane protein (DUF2231)1.60E-07
WP_238213166.1 30130 31423 + 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.20E-12
4.80E-05
WP_238213168.1 31491 32070 + 192NO PFAM MATCH---
WP_238213170.1 32193 32709 + 171PF04657DMT_YdcZPutative inner membrane exporter, YdcZ6.70E-39
WP_238213172.1 33618 32709 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.10E-26
2.20E-17
WP_238213174.1 33812 34787 + 324PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
2.10E-21
5.10E-19
1.90E-07

Results for WP_072358767.1 [Methanohalophilus portucalensis FDF-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_072358781.1 454061 454886 + 274PF01656
PF10609
PF00037
PF14697
PF13484
CbiA
ParA
Fer4
Fer4_21
Fer4_16
CobQ/CobB/MinD/ParA nucleotide binding domain
NUBPL iron-transfer P-loop NTPase
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S double cluster binding domain
7.90E-18
2.90E-17
3.90E-11
8.50E-09
9.10E-08
WP_072358780.1 454882 455746 + 287PF01656
PF10609
PF00037
PF12838
PF13614
CbiA
ParA
Fer4
Fer4_7
AAA_31
CobQ/CobB/MinD/ParA nucleotide binding domain
NUBPL iron-transfer P-loop NTPase
4Fe-4S binding domain
4Fe-4S dicluster domain
AAA domain
2.20E-16
1.20E-14
4.30E-12
2.90E-08
3.50E-08
WP_072358778.1 455742 456315 + 190PF08901DUF1847Protein of unknown function (DUF1847)5.90E-52
WP_072358777.1 456317 456974 + 218PF00753
PF12706
PF16661
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily domain
6.60E-15
1.60E-08
4.10E-05
WP_072358775.1 457030 457315 + 94PF02915
PF09537
Rubrerythrin
DUF2383
Rubrerythrin
Domain of unknown function (DUF2383)
1.20E-07
9.20E-06
WP_072358773.1 457352 458648 + 431PF13194
PF02308
DUF4010
MgtC
Domain of unknown function (DUF4010)
MgtC family
1.50E-50
8.40E-20
WP_072358771.1 458694 459114 + 139PF02742
PF01325
PF12802
PF01047
PF13412
Fe_dep_repr_C
Fe_dep_repress
MarR_2
MarR
HTH_24
Iron dependent repressor, metal binding and dimerisation domain
Iron dependent repressor, N-terminal DNA binding domain
MarR family
MarR family
Winged helix-turn-helix DNA-binding
1.50E-14
1.20E-12
9.60E-07
5.20E-06
1.30E-05
WP_084006254.1 459765 459117 - 215PF07812TfuATfuA-like protein2.60E-45
WP_072358767.1 461042 459761 - 426PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-87
WP_157769627.1 461325 461478 + 50NO PFAM MATCH---
WP_072358765.1 461519 462698 + 392PF00266
PF01041
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Cys/Met metabolism PLP-dependent enzyme
3.40E-125
2.20E-05
2.30E-05
WP_072358763.1 464845 462700 - 714PF00586
PF02769
PF18072
AIRS
AIRS_C
FGAR-AT_linker
AIR synthase related protein, N-terminal domain
AIR synthase related protein, C-terminal domain
Formylglycinamide ribonucleotide amidotransferase linker domain
1.40E-47
5.10E-43
7.30E-08
WP_072358761.1 465266 464906 - 119PF02643DUF192Uncharacterized ACR, COG14306.80E-26
WP_013036737.1 465343 465652 + 102PF01253SUI1Translation initiation factor SUI17.30E-20
WP_072358759.1 465829 466189 + 119PF01381
PF16509
PF13412
PF13560
HTH_3
KORA
HTH_24
HTH_31
Helix-turn-helix
TrfB plasmid transcriptional repressor
Winged helix-turn-helix DNA-binding
Helix-turn-helix domain
2.50E-05
4.10E-04
4.30E-04
8.40E-04
WP_072358756.1 466185 467403 + 405PF04894
PF04895
Nre_N
Nre_C
Archaeal Nre, N-terminal
Archaeal Nre, C-terminal
2.20E-102
9.60E-41
WP_072358754.1 468292 467560 - 243PF01259SAICAR_syntSAICAR synthetase4.50E-61

Results for WP_069316389.1 [Xenorhabdus hominickii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_099139726.1 440885 444326 + 1146PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
8.20E-75
1.50E-44
4.00E-29
1.10E-26
2.30E-05
WP_069316396.1 444399 445011 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.30E-57
3.60E-05
WP_069316395.1 445018 446362 + 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
1.60E-64
1.50E-23
4.50E-16
1.30E-15
2.40E-07
WP_069316394.1 446452 447742 + 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
3.60E-37
2.30E-29
WP_069316393.1 448746 447942 - 267NO PFAM MATCH---
WP_069316392.1 450220 449479 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.10E-30
6.20E-18
1.40E-05
WP_069316391.1 452783 450500 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-207
2.90E-43
WP_069316390.1 453695 452837 - 285PF01226Form_Nir_transFormate/nitrite transporter4.80E-76
WP_069316389.1 455787 454026 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.70E-81
6.40E-68
WP_069316388.1 455935 456979 + 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
7.80E-58
5.30E-26
WP_244590775.1 457914 457784 - 42PF03400DDE_Tnp_IS1IS1 transposase1.20E-14
WP_069316387.1 458310 459399 + 362PF00266Aminotran_5Aminotransferase class-V4.60E-66
WP_069316386.1 459575 460862 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.00E-149
WP_069316385.1 461066 461753 + 228PF02224
PF13189
PF13207
PF13671
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_33
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.10E-79
3.10E-06
1.50E-04
2.00E-04
4.90E-04
WP_069316384.1 461945 463619 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.30E-97
1.20E-10
1.10E-05
WP_038237207.1 463694 463985 + 96PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.30E-29
3.50E-08
WP_069316383.1 464229 466593 + 787PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.10E-49
6.70E-19
2.70E-08

Results for WP_034098122.1 [Pseudomonas sp. S5F11] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017847897.1 536007 536217 + 70INFERRED GENE---
WP_220698074.1 536404 536557 + 50NO PFAM MATCH---
WP_220698075.1 539114 537173 - 646PF00015
PF02743
PF00672
PF17201
MCPsignal
dCache_1
HAMP
Cache_3-Cache_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
Cache 3/Cache 2 fusion domain
1.60E-39
5.00E-27
5.60E-10
1.70E-04
WP_220698076.1 543271 539263 - 1335PF00384
PF01568
PF00667
PF00258
PF04879
Molybdopterin
Molydop_binding
FAD_binding_1
Flavodoxin_1
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
FAD binding domain
Flavodoxin
Molybdopterin oxidoreductase Fe4S4 domain
2.40E-71
2.60E-32
1.00E-30
1.40E-27
5.50E-19
WP_220698077.1 543778 546340 + 853PF07992
PF01077
PF00070
PF03460
PF04324
Pyr_redox_2
NIR_SIR
Pyr_redox
NIR_SIR_ferr
Fer2_BFD
Pyridine nucleotide-disulphide oxidoreductase
Nitrite and sulphite reductase 4Fe-4S domain
Pyridine nucleotide-disulphide oxidoreductase
Nitrite/Sulfite reductase ferredoxin-like half domain
BFD-like [2Fe-2S] binding domain
6.50E-47
4.20E-19
6.60E-14
1.30E-11
2.80E-11
WP_034113864.1 546339 546705 + 121PF13806Rieske_2Rieske-like [2Fe-2S] domain2.50E-35
WP_220698078.1 547522 548926 + 467NO PFAM MATCH---
WP_169902640.1 550534 548968 - 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
7.00E-48
3.50E-13
1.00E-10
4.50E-10
1.80E-04
WP_034098122.1 550697 552896 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.30E-74
1.50E-70
3.40E-08
WP_259445041.1 555202 553819 - 460NO PFAM MATCH---
WP_169902637.1 555752 555269 - 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase2.40E-47
WP_034113855.1 556460 555938 - 173PF00583
PF13673
PF13508
PF08445
PF13302
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
FR47
Acetyltransf_3
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
Acetyltransferase (GNAT) domain
5.10E-16
1.70E-08
5.40E-08
1.40E-04
3.30E-04
WP_034098118.1 556674 557538 + 287PF01145Band_7SPFH domain / Band 7 family3.70E-29
WP_220698080.1 557632 558130 + 165PF11066DUF2867Protein of unknown function (DUF2867)1.10E-34
WP_220698081.1 560331 558171 - 719PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.80E-53
1.30E-15
WP_169902635.1 563146 560584 - 853PF03797
PF18883
Autotransporter
AC_1
Autotransporter beta-domain
Autochaperone Domain Type 1
1.30E-40
1.20E-26
WP_034098109.1 564152 563390 - 253PF02585PIG-LGlcNAc-PI de-N-acetylase8.80E-18

Results for WP_076963514.1 [Pseudomonas gessardii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076963514.1 78 2268 + 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.70E-74
6.70E-72
1.60E-07
WP_169900019.1 2280 2925 + 214PF00753
PF14597
Lactamase_B
Lactamase_B_5
Metallo-beta-lactamase superfamily
Metallo-beta-lactamase superfamily
1.10E-27
6.10E-04
WP_076963512.1 3091 3853 + 253PF00691
PF13488
OmpA
Gly-zipper_Omp
OmpA family
Glycine zipper
6.40E-22
1.80E-05
WP_099167623.1 4504 3922 - 193PF04972BONBON domain4.60E-28
WP_003171862.1 5094 4500 - 197PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
1.20E-33
9.40E-07
WP_076963510.1 5570 5198 - 123PF02021UPF0102Uncharacterised protein family UPF01021.60E-26
WP_076963509.1 7381 5569 - 603PF04348
PF13458
LppC
Peripla_BP_6
LppC putative lipoprotein
Periplasmic binding protein
2.60E-171
4.40E-08
WP_076963508.1 7600 8473 + 290PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases4.00E-28

Results for WP_005273349.1 [Yersinia bercovieri ATCC 43970] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032897505.1 60591 59991 - 199PF03264
PF14522
PF14537
PF02085
PF09699
Cytochrom_NNT
Cytochrome_C7
Cytochrom_c3_2
Cytochrom_CIII
Paired_CXXCH_1
NapC/NirT cytochrome c family, N-terminal region
Cytochrome c7 and related cytochrome c
Cytochrome c3
Class III cytochrome C family
Doubled CXXCH motif (Paired_CXXCH_1)
8.30E-80
6.40E-08
6.00E-07
2.30E-06
2.60E-05
WP_032897502.1 61100 60632 - 155PF03892NapBNitrate reductase cytochrome c-type subunit (NapB)1.10E-45
WP_032897499.1 63718 61222 - 831PF00384
PF01568
PF04879
PF10518
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
TAT (twin-arginine translocation) pathway signal sequence
1.20E-89
2.70E-24
3.60E-18
1.90E-06
WP_032897496.1 63981 63714 - 88PF03927NapDNapD protein3.90E-24
WP_005273362.1 64474 63970 - 167PF12838
PF13187
PF00037
PF13484
PF12800
Fer4_7
Fer4_9
Fer4
Fer4_16
Fer4_4
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S double cluster binding domain
4Fe-4S binding domain
7.80E-15
1.50E-12
4.80E-12
1.20E-08
2.20E-08
WP_005273360.1 65208 65838 + 209PF00072
PF00196
PF04545
PF08281
Response_reg
GerE
Sigma70_r4
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
5.20E-29
7.10E-23
5.70E-05
7.40E-05
WP_005273358.1 66164 65885 - 92PF09904HTH_43Winged helix-turn helix2.80E-37
WP_005273355.1 66380 69500 + 1039PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
6.00E-14
7.00E-10
WP_005273349.1 69955 71170 + 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-24
WP_032897492.1 72725 71654 - 356PF00005
PF13304
PF13555
PF13191
ABC_tran
AAA_21
AAA_29
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
AAA ATPase domain
3.20E-34
6.80E-06
1.70E-04
4.60E-04
WP_005273344.1 74487 72717 - 589PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.80E-22
WP_032897489.1 75661 74572 - 362PF13416
PF13531
PF01547
PF13343
SBP_bac_8
SBP_bac_11
SBP_bac_1
SBP_bac_6
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
8.90E-23
1.40E-14
1.70E-12
3.40E-12
WP_005273340.1 75987 76461 + 157PF13432
PF12688
PF13181
PF13424
PF00515
TPR_16
TPR_5
TPR_8
TPR_12
TPR_1
Tetratricopeptide repeat
Tetratrico peptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.10E-14
4.90E-13
2.10E-11
5.30E-11
6.10E-11
WP_005273337.1 76621 77020 + 132PF03960ArsCArsC family2.20E-16
WP_005273336.1 77021 78149 + 375PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
5.80E-44
3.30E-24
WP_032897487.1 78145 78838 + 230PF02557VanYD-alanyl-D-alanine carboxypeptidase7.30E-39
WP_005273331.1 78840 79035 + 64PF13980UPF0370Uncharacterised protein family (UPF0370)1.80E-36

Results for WP_049645788.1 [Yersinia mollaretii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_167312018.1 382999 386701 + 1233PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
1.10E-72
6.70E-43
3.70E-28
1.90E-26
5.00E-05
WP_004873738.1 386806 387418 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
3.10E-59
7.70E-05
WP_208759681.1 387434 388769 + 444PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
8.10E-64
1.30E-22
1.80E-15
8.10E-13
7.80E-07
WP_049645784.1 388915 390208 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
4.80E-35
5.80E-29
WP_032813145.1 390444 391593 + 382PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
5.10E-28
5.50E-09
4.20E-06
4.10E-05
WP_005171041.1 392411 391670 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.50E-31
1.70E-18
4.50E-06
WP_004873744.1 394772 392489 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.50E-205
1.30E-43
WP_208760504.1 395640 394824 - 271PF01226Form_Nir_transFormate/nitrite transporter1.30E-73
WP_049645788.1 397955 396188 - 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.00E-80
9.40E-63
WP_049646172.1 398104 399142 + 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
5.80E-62
2.00E-25
WP_049645789.1 399301 400387 + 361PF00266Aminotran_5Aminotransferase class-V1.00E-67
WP_049677983.1 400521 401808 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.90E-149
WP_004873750.1 402104 402797 + 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.10E-81
4.30E-07
1.50E-04
5.30E-04
WP_004391091.1 402965 404639 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_005184672.1 404699 404984 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.60E-28
4.70E-07
WP_011171805.1 405380 407663 + 761INFERRED GENE---
WP_049645792.1 407698 409447 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
9.90E-60
1.10E-34
3.60E-10
5.80E-05
6.70E-05

Results for WP_023315751.1 [Enterobacter hormaechei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003858227.1 115821 114072 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
5.70E-61
1.90E-36
9.60E-10
1.20E-05
2.00E-04
WP_032657935.1 118122 115857 - 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
4.60E-52
1.60E-18
1.10E-04
WP_003858233.1 118622 118334 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
5.20E-29
2.40E-07
5.00E-04
WP_003858235.1 120466 118792 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.70E-99
1.20E-11
1.00E-06
WP_003858236.1 121261 120577 - 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.10E-84
2.40E-07
2.70E-04
9.20E-04
WP_003858238.1 122730 121446 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-151
WP_032657932.1 123887 122798 - 362PF00266Aminotran_5Aminotransferase class-V2.50E-70
WP_003858241.1 124742 124049 - 230PF04239DUF421Protein of unknown function (DUF421)3.90E-15
WP_023315751.1 124869 126630 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.30E-85
3.20E-68
WP_017384832.1 127035 127893 + 285PF01226Form_Nir_transFormate/nitrite transporter9.20E-74
WP_003858247.1 127944 130227 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-207
4.80E-44
WP_003858250.1 130430 131171 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.80E-32
4.50E-18
2.00E-06
WP_022650721.1 131729 131207 - 173PF06823DUF1236Protein of unknown function (DUF1236)8.20E-04
WP_003858254.1 133001 131852 - 382PF07690
PF06779
PF00083
PF13347
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_2
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS/sugar transport protein
MFS_1 like family
3.00E-28
5.90E-12
3.40E-06
7.50E-05
1.30E-04
WP_032657930.1 134139 133275 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.80E-113
WP_000213046.1 134140 134341 + 67INFERRED GENE---
WP_271086481.1 134684 134381 - 101PF13247
PF12837
PF00037
PF13187
PF12797
Fer4_11
Fer4_6
Fer4
Fer4_9
Fer4_2
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
5.10E-15
1.50E-08
2.40E-08
4.60E-07
5.30E-07

Results for WP_023303388.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_065878960.1 [Pseudomonas sp. A-RE-26] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017528469.1 143467 145705 + 745PF02922
PF02806
PF00128
CBM_48
Alpha-amylase_C
Alpha-amylase
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha amylase, C-terminal all-beta domain
Alpha amylase, catalytic domain
1.60E-25
4.90E-23
8.90E-12
WP_017528468.1 145756 146923 + 388PF00990GGDEFDiguanylate cyclase, GGDEF domain3.70E-46
WP_135196797.1 149118 146931 - 728PF00072
PF02518
PF01590
PF13185
PF00512
Response_reg
HATPase_c
GAF
GAF_2
HisKA
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GAF domain
GAF domain
His Kinase A (phospho-acceptor) domain
1.80E-16
4.80E-15
7.30E-15
8.50E-14
8.40E-08
WP_135196796.1 150136 149284 - 283PF00188CAPCysteine-rich secretory protein family8.70E-20
WP_217855068.1 151432 150217 - 404PF07690
PF06609
PF12832
PF03137
MFS_1
TRI12
MFS_1_like
OATP
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
MFS_1 like family
Organic Anion Transporter Polypeptide (OATP) family
1.50E-55
2.90E-04
3.20E-04
6.90E-04
WP_017528465.1 151545 152427 + 293PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.90E-23
2.20E-15
WP_017528464.1 152482 153160 + 225PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
8.40E-06
8.80E-05
9.00E-04
WP_017528463.1 154766 153200 - 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
5.40E-49
4.10E-13
5.90E-09
1.10E-08
7.10E-05
WP_065878960.1 154928 157130 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-72
8.00E-71
3.70E-08
WP_017528461.1 158052 157197 - 284PF00701DHDPSDihydrodipicolinate synthetase family2.90E-53
WP_017528459.1 158832 158334 - 165PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase9.80E-48
WP_263290836.1 159080 159947 + 288PF06445
PF12833
PF14526
PF00165
GyrI-like
HTH_18
Cass2
HTH_AraC
GyrI-like small molecule binding domain
Helix-turn-helix domain
Integron-associated effector binding protein
Bacterial regulatory helix-turn-helix proteins, AraC family
3.70E-31
8.50E-20
1.10E-13
1.20E-12
WP_241665010.1 160035 160347 + 103NO PFAM MATCH---
WP_065878964.1 161747 160409 - 445PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
2.90E-33
4.00E-29
WP_032883464.1 162806 161834 - 323PF00892
PF10639
EamA
TMEM234
EamA-like transporter family
Putative transmembrane family 234
6.30E-16
7.50E-04
WP_068936573.1 164125 163393 - 243NO PFAM MATCH---
WP_017528451.1 164979 164250 - 242NO PFAM MATCH---

Results for WP_006094000.1 [Bacillus pseudomycoides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006094010.1 73254 72600 - 217NO PFAM MATCH---
WP_098707104.1 74710 73570 - 379PF19127
PF01473
PF06725
Choline_bind_3
Choline_bind_1
3D
Choline-binding repeat
Putative cell wall binding repeat
3D domain
9.90E-36
6.40E-30
1.00E-18
WP_006094007.1 75116 74930 - 61PF13121DUF3976Domain of unknown function (DUF3976)6.20E-17
WP_098018287.1 75540 75162 - 125NO PFAM MATCH---
WP_018764075.1 75766 75559 - 68PF01381
PF12844
PF13560
PF13413
PF08279
HTH_3
HTH_19
HTH_31
HTH_25
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Helix-turn-helix domain
HTH domain
2.20E-18
3.50E-10
4.20E-08
8.30E-05
9.60E-05
WP_006094003.1 76647 79533 + 961PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.10E-67
1.30E-55
1.90E-37
WP_006094002.1 79689 80934 + 414PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.30E-81
1.10E-20
2.40E-12
4.40E-07
WP_018781104.1 81291 83211 + 639NO PFAM MATCH---
WP_006094000.1 83210 85160 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-89
WP_018781105.1 85182 86748 + 521PF00881NitroreductaseNitroreductase family1.50E-11
WP_003203224.1 87427 87016 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.30E-43
WP_006093998.1 88948 87613 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.10E-63
2.70E-20
2.20E-19
1.80E-15
6.70E-11
WP_018781107.1 89400 89832 + 143NO PFAM MATCH---
WP_098018285.1 91418 90158 - 419PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
4.70E-21
8.50E-06
WP_098018284.1 92238 91437 - 266PF12773
PF13248
PF13240
DZR
zf-ribbon_3
zinc_ribbon_2
Double zinc ribbon
zinc-ribbon domain
zinc-ribbon domain
2.90E-04
4.50E-04
5.60E-04
WP_098018282.1 92420 93254 + 277NO PFAM MATCH---
WP_018781110.1 93952 93268 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)9.00E-74

Results for WP_000192992.1 [Bacillus sp. S0628] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003258593.1 106465 106219 - 81NO PFAM MATCH---
WP_001036577.1 106867 106504 - 120NO PFAM MATCH---
WP_001178294.1 107182 106999 - 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_001109897.1 107588 107210 - 125NO PFAM MATCH---
WP_000428510.1 107800 107590 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_086389849.1 108623 111491 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.00E-36
WP_000569919.1 111624 112884 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.80E-81
3.40E-20
5.00E-13
1.60E-04
WP_001061548.1 113009 114929 + 639NO PFAM MATCH---
WP_000192992.1 114925 116875 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-83
WP_001175535.1 116890 118432 + 513PF00881NitroreductaseNitroreductase family1.10E-13
WP_000996793.1 118873 118462 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.10E-51
WP_000495856.1 119508 119019 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
4.30E-10
1.40E-06
8.40E-05
WP_097982088.1 120943 119608 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.60E-64
1.20E-20
4.20E-17
2.10E-15
9.70E-11
WP_000332402.1 121140 121572 + 143NO PFAM MATCH---
WP_001099914.1 122851 121615 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
1.80E-22
6.70E-06
WP_000650096.1 123656 122870 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.60E-06
7.80E-04
WP_000424512.1 123852 124686 + 277PF11667DUF3267Putative zincin peptidase8.50E-04

Results for WP_074382772.1 [Acinetobacter sp. YH12200] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_159138106.1 45725 47456 + 576PF00069
PF07714
PF13672
PF00481
PF07228
Pkinase
PK_Tyr_Ser-Thr
PP2C_2
PP2C
SpoIIE
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Protein phosphatase 2C
Protein phosphatase 2C
Stage II sporulation protein E (SpoIIE)
6.50E-32
1.40E-19
1.40E-16
2.50E-07
2.50E-07
WP_159138190.1 48144 50307 + 720PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
9.90E-28
1.80E-11
WP_100357603.1 50999 50390 - 202PF01914MarCMarC family integral membrane protein7.70E-16
WP_159138107.1 53066 51029 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.30E-176
WP_159138108.1 53326 53914 + 195PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
9.60E-28
1.40E-12
WP_180072720.1 53928 55404 + 491PF00171AldedhAldehyde dehydrogenase family3.50E-173
WP_180072722.1 55419 57087 + 555PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
1.10E-96
1.30E-40
WP_180000139.1 57234 58005 + 256NO PFAM MATCH---
WP_074382772.1 58370 60569 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
6.00E-76
1.50E-73
7.40E-09
WP_074382773.1 62582 60869 - 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.00E-50
2.60E-07
1.10E-06
2.60E-06
2.80E-06
WP_005170895.1 63639 62802 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
1.00E-16
2.00E-12
4.80E-05
WP_074383164.1 64119 65274 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
2.80E-47
4.40E-32
4.20E-29
3.80E-25
WP_180072724.1 65306 66506 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
1.50E-33
1.10E-27
2.40E-20
3.40E-04
WP_005170902.1 66757 68038 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
1.60E-59
5.60E-29
5.50E-06
5.80E-05
WP_005170906.1 68079 68751 + 223PF01144CoA_transCoenzyme A transferase1.70E-65
WP_159138111.1 68750 69404 + 217PF01144CoA_transCoenzyme A transferase1.80E-31
WP_180050720.1 69699 69585 - 37PF13586DDE_Tnp_1_2Transposase DDE domain1.50E-07

Results for WP_003256021.1 back to top

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Couldn't process WP_003256021.1 Genbank filestream. May be corrupt.

Results for WP_004577526.1 [Pseudomonas sp. HD6515] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003249588.1 5652875 5651738 - 378PF13458
PF01094
PF13433
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Periplasmic binding protein
Receptor family ligand binding region
Periplasmic binding protein domain
1.40E-67
9.00E-26
1.20E-18
WP_004576971.1 5653387 5654593 + 401PF04095
PF17767
NAPRTase
NAPRTase_N
Nicotinate phosphoribosyltransferase (NAPRTase) family
Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
3.00E-69
6.70E-32
WP_003249583.1 5654596 5655424 + 275PF02540NAD_synthaseNAD synthase2.50E-63
WP_003249580.1 5655976 5655526 - 149PF00127
PF13473
Copper-bind
Cupredoxin_1
Copper binding proteins, plastocyanin/azurin family
Cupredoxin-like domain
1.70E-25
7.60E-04
WP_003249578.1 5656326 5656914 + 195PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.70E-42
1.00E-17
WP_004577239.1 5657278 5658607 + 442PF01548
PF02371
DEDD_Tnp_IS110
Transposase_20
Transposase
Transposase IS116/IS110/IS902 family
1.20E-20
2.20E-12
WP_003249577.1 5661033 5658732 - 766PF08497
PF11842
PF04055
Radical_SAM_N
DUF3362
Radical_SAM
Radical SAM N-terminal
Domain of unknown function (DUF3362)
Radical SAM superfamily
1.30E-144
2.90E-51
2.20E-22
WP_019438726.1 5661533 5661317 - 71PF11275DUF3077Protein of unknown function (DUF3077)3.50E-14
WP_004577526.1 5662163 5663318 + 384PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-22
WP_004577527.1 5663319 5664975 + 551PF00005
PF00664
PF02463
PF13304
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
1.50E-19
8.00E-07
2.30E-05
6.20E-05
1.70E-04
WP_003249571.1 5666397 5664999 - 465PF03796
PF00772
PF13481
PF06745
PF13671
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
DnaB-like helicase C terminal domain
DnaB-like helicase N terminal domain
AAA domain
KaiC
AAA domain
4.10E-113
3.60E-36
1.90E-12
9.80E-08
1.10E-04
WP_003249568.1 5666957 5666510 - 148PF03948
PF01281
Ribosomal_L9_C
Ribosomal_L9_N
Ribosomal protein L9, C-terminal domain
Ribosomal protein L9, N-terminal domain
1.30E-27
5.60E-19
WP_003249565.1 5667841 5666977 - 287NO PFAM MATCH---
WP_003249563.1 5668105 5667874 - 76PF01084Ribosomal_S18Ribosomal protein S184.90E-24
WP_003249557.1 5668559 5668133 - 141PF01250Ribosomal_S6Ribosomal protein S62.20E-25
WP_003249554.1 5669596 5668849 - 248PF00588
PF08032
SpoU_methylase
SpoU_sub_bind
SpoU rRNA Methylase family
RNA 2'-O ribose methyltransferase substrate binding
6.00E-40
3.80E-21
WP_003249552.1 5672166 5669592 - 857PF00773
PF17876
PF08206
PF00575
PF08461
RNB
CSD2
OB_RNB
S1
HTH_12
RNB domain
Cold shock domain
Ribonuclease B OB domain
S1 RNA binding domain
Ribonuclease R winged-helix domain
9.20E-106
7.00E-24
3.10E-21
9.10E-14
1.20E-08

Results for WP_000191874.1 [Bacillus toyonensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001195088.1 89814 89544 - 89NO PFAM MATCH---
WP_001034134.1 90194 89831 - 120NO PFAM MATCH---
WP_001178305.1 90512 90329 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001000065.1 90918 90540 - 125NO PFAM MATCH---
WP_000428507.1 91130 90914 - 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.30E-05
7.40E-05
WP_000197133.1 92096 94964 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
7.70E-63
5.00E-55
1.30E-36
WP_000569924.1 95094 96354 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.20E-80
3.40E-20
5.00E-13
1.60E-04
WP_001061536.1 96479 98399 + 639NO PFAM MATCH---
WP_000191874.1 98395 100345 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-85
WP_001175564.1 100360 101902 + 513PF00881NitroreductaseNitroreductase family1.20E-12
WP_000996796.1 102342 101931 - 136PF13048DUF3908Protein of unknown function (DUF3908)6.40E-52
WP_000259506.1 103081 102592 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.20E-10
1.90E-07
1.20E-04
WP_001110249.1 104516 103181 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.60E-62
5.60E-19
1.00E-16
2.30E-15
6.80E-10
WP_000336278.1 104715 105138 + 140NO PFAM MATCH---
WP_001099931.1 106420 105184 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
5.30E-22
9.20E-05
WP_000650066.1 107225 106439 - 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.40E-05
3.70E-05
WP_000397497.1 107426 108260 + 277NO PFAM MATCH---

Results for WP_071647772.1 back to top

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Couldn't process WP_071647772.1 Genbank filestream. May be corrupt.

Results for WP_021015598.1 [Serratia sp. ATCC 39006] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021015606.1 3434693 3435431 + 245PF00977
PF01207
PF00290
PF02581
PF03060
His_biosynth
Dus
Trp_syntA
TMP-TENI
NMO
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
Nitronate monooxygenase
3.70E-76
3.20E-08
8.20E-06
2.70E-05
5.20E-05
WP_021015605.1 3435412 3436189 + 258PF00977
PF01207
PF03060
PF05690
His_biosynth
Dus
NMO
ThiG
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Thiazole biosynthesis protein ThiG
7.90E-75
2.20E-06
2.90E-04
3.50E-04
WP_021015604.1 3436182 3436797 + 204PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
2.20E-30
1.30E-15
WP_021015603.1 3437239 3436954 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.20E-28
1.30E-06
WP_037381511.1 3439009 3437326 - 560PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.70E-96
6.70E-12
7.90E-07
WP_021015601.1 3439806 3439128 - 225PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.90E-81
2.10E-07
7.30E-05
8.40E-05
6.90E-04
WP_021015600.1 3441278 3439988 - 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.10E-152
WP_021015599.1 3442604 3441518 - 361PF00266Aminotran_5Aminotransferase class-V1.70E-60
WP_021015598.1 3442857 3444621 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.60E-83
1.90E-66
WP_021015597.1 3445170 3446028 + 285PF01226Form_Nir_transFormate/nitrite transporter3.40E-74
WP_021015596.1 3446086 3448369 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-206
4.00E-43
WP_037381508.1 3448759 3449494 + 244PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.60E-30
2.30E-19
5.90E-06
WP_021015594.1 3450792 3449487 - 434PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin8.60E-16
WP_021015593.1 3451061 3451991 + 309PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.10E-15
2.20E-14
WP_021015592.1 3453139 3451987 - 383PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.60E-32
8.90E-07
2.80E-06
2.80E-05
WP_021015591.1 3453557 3454208 + 216PF13743
PF01323
Thioredoxin_5
DSBA
Thioredoxin
DSBA-like thioredoxin domain
1.90E-05
1.70E-04
WP_021015590.1 3454881 3454266 - 204PF02613Nitrate_red_delNitrate reductase delta subunit4.70E-21

Results for WP_071194699.1 [Enterobacteriaceae bacterium ENNIH3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_071196088.1 2905721 2908166 + 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
6.10E-110
7.20E-29
1.80E-18
WP_079498341.1 2908176 2908794 + 205PF13247
PF12797
PF00037
PF12838
PF13187
Fer4_11
Fer4_2
Fer4
Fer4_7
Fer4_9
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.10E-28
1.50E-13
1.40E-12
7.20E-12
8.70E-12
WP_071194694.1 2908795 2909662 + 288PF04976DmsCDMSO reductase anchor subunit (DmsC)2.90E-108
WP_039078539.1 2909939 2911088 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
9.40E-31
6.60E-08
5.40E-07
WP_039078757.1 2911222 2911711 + 162PF06823DUF1236Protein of unknown function (DUF1236)1.60E-04
WP_039078540.1 2912484 2911743 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
3.70E-18
6.10E-06
WP_039078541.1 2915094 2912811 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.00E-207
5.20E-44
WP_039078542.1 2916007 2915149 - 285PF01226Form_Nir_transFormate/nitrite transporter1.00E-74
WP_071194699.1 2918175 2916414 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.80E-85
2.90E-65
WP_039078543.1 2918312 2919005 + 230PF04239DUF421Protein of unknown function (DUF421)1.20E-15
WP_071194692.1 2919167 2920256 + 362PF00266Aminotran_5Aminotransferase class-V2.50E-68
WP_071194691.1 2920327 2921611 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.70E-148
WP_039078546.1 2921769 2922528 + 252PF01435Peptidase_M48Peptidase family M482.60E-26
WP_039078547.1 2922700 2923384 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
6.70E-85
3.30E-07
4.50E-04
8.70E-04
9.30E-04
WP_039078548.1 2923495 2925169 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
5.40E-99
5.40E-12
3.10E-07
WP_039078549.1 2925386 2925674 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.20E-29
5.80E-08
9.60E-05
WP_071194689.1 2925885 2928150 + 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
6.50E-53
2.50E-16
2.10E-04

Results for WP_047414124.1 back to top

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Couldn't process WP_047414124.1 Genbank filestream. May be corrupt.

Results for WP_059287908.1 back to top

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Couldn't process WP_059287908.1 Genbank filestream. May be corrupt.

Results for WP_000194828.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_076649424.1 [Vibrio splendidus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_198596758.1 707 0 - 235PF01391CollagenCollagen triple helix repeat (20 copies)1.80E-15
WP_017090867.1 997 724 - 90NO PFAM MATCH---
WP_102498349.1 2383 1399 - 327PF00498FHAFHA domain2.10E-11
WP_086774669.1 2769 2424 - 114NO PFAM MATCH---
WP_102536775.1 4106 2768 - 445PF07812TfuATfuA-like protein3.80E-47
WP_076649424.1 5329 4102 - 408PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.90E-70
WP_102566199.1 6334 5416 - 305NO PFAM MATCH---
WP_104214687.1 10420 6349 - 1356PF00069
PF07714
PF13191
PF13424
PF13181
Pkinase
PK_Tyr_Ser-Thr
AAA_16
TPR_12
TPR_8
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Tetratricopeptide repeat
Tetratricopeptide repeat
1.60E-50
3.50E-29
5.40E-11
2.90E-10
2.70E-05
WP_102498344.1 12489 10749 - 579PF01565FAD_binding_4FAD binding domain1.20E-22
WP_017088060.1 12719 12485 - 77NO PFAM MATCH---
WP_157940438.1 12969 13713 + 247PF07484CollarPhage Tail Collar Domain3.00E-15
WP_011495916.1 14162 15363 + 400INFERRED GENE---
WP_157936342.1 15509 15728 + 72PF13007LZ_Tnp_IS66Transposase C of IS166 homeodomain4.30E-05
BCU77_RS03800 15743 16754 + 337INFERRED GENE---
WP_102449783.1 16769 16916 + 48PF13817DDE_Tnp_IS66_CIS66 C-terminal element4.70E-16

Results for WP_069604603.1 [Bacillus sp. AS_5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001171895.1 463426 463267 - 52NO PFAM MATCH---
WP_001036583.1 463899 463536 - 120NO PFAM MATCH---
WP_001178291.1 464214 464031 - 60PF13121DUF3976Domain of unknown function (DUF3976)8.70E-27
WP_001109902.1 464620 464242 - 125NO PFAM MATCH---
WP_000428506.1 464832 464622 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_000197161.1 465655 468523 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.20E-55
1.20E-36
WP_000569922.1 468656 469916 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_001061566.1 470040 471960 + 639NO PFAM MATCH---
WP_069604603.1 471956 473906 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-84
WP_001175550.1 473921 475463 + 513PF00881NitroreductaseNitroreductase family1.90E-12
WP_000996781.1 475904 475493 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.20E-52
WP_001110231.1 477399 476064 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.40E-64
2.30E-20
6.40E-17
1.70E-15
3.40E-10
WP_266001119.1 477598 478027 + 142NO PFAM MATCH---
WP_266001121.1 479301 478065 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
3.10E-22
8.70E-04
WP_266001123.1 480106 479320 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
8.10E-06
7.80E-04
WP_000424524.1 480302 481136 + 277NO PFAM MATCH---
WP_266001126.1 481834 481150 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.50E-74

Results for WP_033751294.1 [Pantoea sp. FDAARGOS_194] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_096072877.1 1932264 1935804 + 1179PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
1.00E-73
8.10E-42
3.70E-28
1.50E-27
1.30E-05
WP_033751302.1 1935981 1936593 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
5.80E-58
5.10E-05
WP_033751927.1 1936600 1937944 + 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
3.20E-63
2.70E-23
1.50E-16
6.80E-15
3.50E-07
WP_096072878.1 1938034 1939327 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
5.80E-37
1.30E-33
WP_033751924.1 1939632 1940784 + 383PF07690
PF06779
PF00083
PF13347
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_2
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS/sugar transport protein
MFS_1 like family
3.00E-27
4.00E-09
1.90E-04
3.30E-04
5.10E-04
WP_033751298.1 1941589 1940848 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.80E-32
7.80E-18
1.30E-05
WP_033751297.1 1944031 1941748 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.10E-207
1.40E-43
WP_096072879.1 1944960 1944099 - 286PF01226Form_Nir_transFormate/nitrite transporter1.40E-73
WP_033751294.1 1947085 1945324 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.90E-83
4.10E-67
WP_096072880.1 1947395 1948481 + 361PF00266Aminotran_5Aminotransferase class-V7.80E-65
WP_096072881.1 1948567 1949854 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.60E-148
WP_033751286.1 1950054 1950735 + 226PF02224
PF13189
PF13207
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.00E-82
2.20E-07
4.30E-05
4.30E-05
WP_048784670.1 1950859 1952533 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.80E-99
3.80E-13
1.30E-07
WP_033751281.1 1952620 1952905 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
2.90E-29
1.40E-07
9.50E-04
WP_096072882.1 1953110 1955363 + 750PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
7.00E-48
1.40E-15
2.50E-07
6.50E-04
WP_096072883.1 1955397 1957146 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
9.90E-60
1.60E-35
1.90E-10
4.30E-07
6.50E-05
WP_096072884.1 1957142 1958144 + 333PF02606
PF13439
LpxK
Glyco_transf_4
Tetraacyldisaccharide-1-P 4'-kinase
Glycosyltransferase Family 4
4.00E-119
2.00E-04

Results for WP_048800829.1 [Streptococcus constellatus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003036392.1 66274 66772 + 165PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
1.40E-07
6.00E-06
WP_002874851.1 66845 67350 + 168INFERRED GENE---
WP_086558257.1 67432 68565 + 377INFERRED GENE---
WP_003028451.1 68658 69258 + 200INFERRED GENE---
WP_019314402.1 69261 69843 + 194INFERRED GENE---
WP_080980148.1 70247 70409 + 53NO PFAM MATCH---
WP_049476986.1 70623 71571 + 315PF00881NitroreductaseNitroreductase family4.90E-15
WP_048800830.1 71570 72638 + 355NO PFAM MATCH---
WP_048800829.1 72642 74001 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.00E-41
WP_080980152.1 74041 74644 + 200PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.00E-10
WP_049476985.1 74640 75339 + 232PF19393DUF5968Family of unknown function (DUF5968)1.90E-19
WP_048800826.1 75359 76283 + 307PF00005
PF13304
PF03193
PF13476
PF02463
ABC_tran
AAA_21
RsgA_GTPase
AAA_23
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
AAA domain
RecF/RecN/SMC N terminal domain
1.40E-32
1.20E-13
3.10E-04
3.30E-04
9.80E-04
WP_049476984.1 76291 77419 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.60E-21
1.10E-16
1.70E-12
WP_048800824.1 77415 78534 + 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
3.30E-41
3.10E-21
WP_003036319.1 78692 79580 + 295PF01145
PF16200
Band_7
Band_7_C
SPFH domain / Band 7 family
C-terminal region of band_7
9.70E-29
4.20E-04
WP_003025899.1 79688 79904 + 71NO PFAM MATCH---
WP_049476983.1 81004 80263 - 246PF00005
PF13304
PF02463
PF09818
PF13555
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
P-loop containing region of AAA domain
2.40E-34
4.20E-11
3.40E-10
5.00E-05
5.60E-04

Results for WP_023187136.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_115398459.1 2904249 2901984 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.00E-52
1.80E-15
5.20E-07
WP_000167332.1 2904763 2904478 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140319.1 2906592 2904918 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000125003.1 2907389 2906705 - 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-85
1.80E-07
2.50E-04
7.50E-04
WP_115398460.1 2908323 2907561 - 253PF01435Peptidase_M48Peptidase family M482.60E-26
WP_115398461.1 2909749 2908465 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.80E-150
WP_071650944.1 2910910 2909821 - 362PF00266Aminotran_5Aminotransferase class-V5.60E-70
WP_000642871.1 2911788 2911095 - 230PF04239DUF421Protein of unknown function (DUF421)1.10E-15
WP_023187136.1 2911924 2913685 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-81
7.30E-65
WP_000642542.1 2914089 2914947 + 285PF01226Form_Nir_transFormate/nitrite transporter5.50E-75
WP_001292827.1 2915003 2917286 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.30E-208
4.80E-44
WP_079896460.1 2918321 2917361 - 319PF11047SopDSalmonella outer protein D1.20E-156
WP_000067925.1 2918896 2919694 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.10E-31
3.80E-18
4.90E-06
WP_139387115.1 2920287 2919879 - 135NO PFAM MATCH---
WP_001663770.1 2920661 2920385 - 91NO PFAM MATCH---
WP_000559544.1 2920880 2921882 + 333PF01548
PF02371
DEDD_Tnp_IS110
Transposase_20
Transposase
Transposase IS116/IS110/IS902 family
4.00E-25
1.30E-22
WP_001395480.1 2921897 2922509 + 204INFERRED GENE---

Results for WP_032302795.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_241232063.1 22748 20483 - 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
3.60E-51
1.50E-19
3.40E-05
4.80E-04
WP_000167336.1 23238 22953 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 25071 23397 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 25865 25181 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_001353317.1 26802 26037 - 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000445247.1 28254 26970 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.00E-151
WP_000057129.1 29413 28324 - 362PF00266Aminotran_5Aminotransferase class-V4.70E-76
WP_000642852.1 30304 29611 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_032302795.1 30433 32194 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.70E-82
9.60E-67
WP_000642546.1 32599 33457 + 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001292814.1 33511 35794 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.90E-208
1.60E-43
WP_000111043.1 35985 36726 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_032302794.1 37398 36807 - 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
1.90E-38
3.90E-12
WP_001242673.1 37497 38406 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.00E-32
1.20E-19
WP_257853710.1 39837 38406 - 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
7.70E-28
9.20E-14
WP_000109295.1 41195 40046 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.90E-27
4.00E-10
1.00E-06
WP_000165876.1 41509 42136 + 208PF00857IsochorismataseIsochorismatase family6.30E-22

Results for WP_047549242.1 [Staphylococcus schweitzeri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_047549251.1 14608 13687 - 306PF12706
PF13691
PF00753
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Beta-lactamase superfamily domain
tRNase Z endonuclease
Metallo-beta-lactamase superfamily
5.80E-14
2.80E-08
2.90E-08
WP_047529386.1 14921 16406 + 494PF02781
PF00479
G6PD_C
G6PD_N
Glucose-6-phosphate dehydrogenase, C-terminal domain
Glucose-6-phosphate dehydrogenase, NAD binding domain
6.30E-117
9.70E-63
WP_169929118.1 16635 17502 + 288PF14526
PF12833
PF00165
Cass2
HTH_18
HTH_AraC
Integron-associated effector binding protein
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.00E-23
1.40E-11
3.10E-05
WP_047529384.1 19227 17577 - 549PF00128
PF16657
PF14701
Alpha-amylase
Malt_amylase_C
hDGE_amylase
Alpha amylase, catalytic domain
Maltogenic Amylase, C-terminal domain
Glycogen debranching enzyme, glucanotransferase domain
2.20E-118
2.40E-08
6.50E-04
WP_047549248.1 20262 19242 - 339PF00356
PF13377
PF00532
PF01381
PF13407
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
Peripla_BP_4
Bacterial regulatory proteins, lacI family
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Helix-turn-helix
Periplasmic binding protein domain
3.00E-21
1.30E-19
3.50E-16
3.00E-07
7.90E-04
YP_500118.1 20302 20504 + 67INFERRED GENE---
WP_047425653.1 20814 20442 - 123PF00903
PF12681
Glyoxalase
Glyoxalase_2
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
6.30E-09
1.80E-05
WP_224757350.1 21522 20946 - 191PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.30E-05
WP_047549242.1 22861 21535 - 441PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-35
WP_047549240.1 23777 22847 - 309NO PFAM MATCH---
WP_047549238.1 24663 23784 - 292PF00881NitroreductaseNitroreductase family4.90E-15
WP_047549236.1 24953 24659 - 97PF19388DUF5963Family of unknown function (DUF5963)1.90E-16
WP_047549233.1 25699 24964 - 244PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.10E-10
1.90E-07
WP_047549230.1 26559 25695 - 287PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.80E-18
6.20E-07
7.70E-06
5.70E-04
WP_011382299.1 26771 26618 - 50NO PFAM MATCH---
WP_047549223.1 28632 27225 - 468PF00393
PF03446
6PGD
NAD_binding_2
6-phosphogluconate dehydrogenase, C-terminal domain
NAD binding domain of 6-phosphogluconate dehydrogenase
3.40E-134
1.40E-51
WP_047549220.1 29833 28699 - 377PF01546
PF05343
PF07687
PF04389
Peptidase_M20
Peptidase_M42
M20_dimer
Peptidase_M28
Peptidase family M20/M25/M40
M42 glutamyl aminopeptidase
Peptidase dimerisation domain
Peptidase family M28
2.00E-22
3.30E-15
7.80E-13
6.60E-10

Results for WP_012053854.1 [Pseudomonas sp. FW305-E2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003249552.1 83259 85833 + 857PF00773
PF17876
PF08206
PF00575
PF08461
RNB
CSD2
OB_RNB
S1
HTH_12
RNB domain
Cold shock domain
Ribonuclease B OB domain
S1 RNA binding domain
Ribonuclease R winged-helix domain
9.20E-106
7.00E-24
3.10E-21
9.10E-14
1.20E-08
WP_012053857.1 85829 86576 + 248PF00588
PF08032
SpoU_methylase
SpoU_sub_bind
SpoU rRNA Methylase family
RNA 2'-O ribose methyltransferase substrate binding
6.00E-40
3.80E-21
WP_003249557.1 86865 87291 + 141PF01250Ribosomal_S6Ribosomal protein S62.20E-25
WP_003249563.1 87319 87550 + 76PF01084Ribosomal_S18Ribosomal protein S184.90E-24
WP_012053856.1 87583 88447 + 287NO PFAM MATCH---
WP_003249568.1 88467 88914 + 148PF03948
PF01281
Ribosomal_L9_C
Ribosomal_L9_N
Ribosomal protein L9, C-terminal domain
Ribosomal protein L9, N-terminal domain
1.30E-27
5.60E-19
WP_003249571.1 89027 90425 + 465PF03796
PF00772
PF13481
PF06745
PF13671
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
DnaB-like helicase C terminal domain
DnaB-like helicase N terminal domain
AAA domain
KaiC
AAA domain
4.10E-113
3.60E-36
1.90E-12
9.80E-08
1.10E-04
WP_012053855.1 92105 90449 - 551PF00005
PF00664
PF02463
PF13304
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
1.50E-19
2.00E-06
2.30E-05
6.20E-05
1.60E-04
WP_012053854.1 93261 92106 - 384PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-22
WP_012053853.1 93912 94104 + 63PF11275DUF3077Protein of unknown function (DUF3077)9.80E-13
WP_088513281.1 94388 96689 + 766PF08497
PF11842
PF04055
Radical_SAM_N
DUF3362
Radical_SAM
Radical SAM N-terminal
Domain of unknown function (DUF3362)
Radical SAM superfamily
1.50E-144
1.90E-51
2.40E-22
WP_012053851.1 97397 96809 - 195PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.70E-42
1.00E-17
WP_003249580.1 97747 98197 + 149PF00127
PF13473
Copper-bind
Cupredoxin_1
Copper binding proteins, plastocyanin/azurin family
Cupredoxin-like domain
1.70E-25
7.60E-04
WP_012053849.1 99127 98299 - 275PF02540NAD_synthaseNAD synthase2.50E-63
WP_012053848.1 100336 99130 - 401PF04095
PF17767
NAPRTase
NAPRTase_N
Nicotinate phosphoribosyltransferase (NAPRTase) family
Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
3.00E-69
6.10E-32
WP_003249588.1 100848 101985 + 378PF13458
PF01094
PF13433
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Periplasmic binding protein
Receptor family ligand binding region
Periplasmic binding protein domain
1.40E-67
9.00E-26
1.20E-18
WP_003249590.1 102139 103054 + 304PF02653BPD_transp_2Branched-chain amino acid transport system / permease component6.40E-50

Results for WP_030228988.1 [Streptomyces lavendulae subsp. lavendulae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244225277.1 396721 393634 - 1028PF07676
PF01979
PF07969
PF00930
PD40
Amidohydro_1
Amidohydro_3
DPPIV_N
WD40-like Beta Propeller Repeat
Amidohydrolase family
Amidohydrolase family
Dipeptidyl peptidase IV (DPP IV) N-terminal region
1.40E-35
2.10E-14
4.40E-12
1.00E-05
WP_234333532.1 398442 397002 - 479PF07732
PF07731
PF00394
Cu-oxidase_3
Cu-oxidase_2
Cu-oxidase
Multicopper oxidase
Multicopper oxidase
Multicopper oxidase
4.80E-29
3.10E-25
4.50E-10
WP_051840696.1 398828 400712 + 627NO PFAM MATCH---
WP_078950256.1 401910 400659 - 416PF03702AnmKAnhydro-N-acetylmuramic acid kinase8.00E-118
WP_234333546.1 403154 401906 - 415PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
1.20E-32
1.60E-32
1.40E-06
WP_234333531.1 404689 403243 - 481PF17964
PF03734
Big_10
YkuD
Bacterial Ig domain
L,D-transpeptidase catalytic domain
4.90E-38
3.60E-14
WP_030228994.1 404953 405574 + 206PF01300Sua5_yciO_yrdCTelomere recombination4.90E-44
WP_030228992.1 406028 407858 + 609PF03704
PF00486
PF13191
PF00931
BTAD
Trans_reg_C
AAA_16
NB-ARC
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
AAA ATPase domain
NB-ARC domain
2.30E-35
2.70E-10
6.50E-07
1.10E-06
WP_030228988.1 408161 410357 + 731PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-13
WP_158740616.1 410346 412275 + 642PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-82
WP_030228984.1 412323 413892 + 522PF00881NitroreductaseNitroreductase family3.00E-19
WP_078950255.1 413933 416810 + 958PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.30E-45
WP_051840688.1 416797 417877 + 359PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term6.50E-92
WP_030228977.1 417891 418980 + 362PF02163Peptidase_M50Peptidase family M502.60E-05
WP_030228975.1 419034 420021 + 328PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
4.90E-29
4.90E-17
1.80E-06
6.60E-05
WP_030228974.1 420017 420773 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
7.40E-27
3.00E-17
WP_030228973.1 420769 422719 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-80

Results for WP_022633352.1 back to top

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Couldn't process WP_022633352.1 Genbank filestream. May be corrupt.

Results for WP_022632484.1 back to top

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Couldn't process WP_022632484.1 Genbank filestream. May be corrupt.

Results for WP_004522829.1 back to top

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Couldn't process WP_004522829.1 Genbank filestream. May be corrupt.

Results for WP_061326433.1 [Clostridium botulinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_061326440.1 562953 565209 + 751PF00122
PF00702
PF00403
E1-E2_ATPase
Hydrolase
HMA
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
3.70E-50
4.70E-33
2.20E-12
WP_061326439.1 565972 565792 - 59NO PFAM MATCH---
WP_061326438.1 566541 567918 + 458PF02562
PF13638
PF13604
PF13245
PF13086
PhoH
PIN_4
AAA_30
AAA_19
AAA_11
PhoH-like protein
PIN domain
AAA domain
AAA domain
AAA domain
1.30E-48
3.40E-34
8.60E-09
1.20E-07
5.40E-06
WP_061326437.1 568316 569321 + 334PF09992NAGPAPhosphodiester glycosidase7.80E-48
WP_061326436.1 569330 570344 + 337NO PFAM MATCH---
WP_003359769.1 570664 570838 + 57NO PFAM MATCH---
WP_242979870.1 571017 571959 + 313PF00881NitroreductaseNitroreductase family3.10E-21
WP_061326434.1 571961 573044 + 360NO PFAM MATCH---
WP_061326433.1 573059 574418 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-48
WP_061326432.1 574392 575031 + 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.40E-11
WP_061326431.1 575038 575767 + 242PF19393DUF5968Family of unknown function (DUF5968)3.80E-60
WP_061326430.1 575928 576861 + 310PF00005
PF13304
PF13555
ABC_tran
AAA_21
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
1.30E-34
2.00E-10
8.40E-04
WP_061326429.1 576872 577997 + 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.40E-35
1.60E-22
1.10E-15
2.00E-04
WP_061326428.1 577998 579141 + 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.20E-36
7.20E-26
1.60E-13
WP_030033431.1 579516 580167 + 216PF02163Peptidase_M50Peptidase family M503.80E-12
WP_061326427.1 580418 581510 + 363PF07730HisKA_3Histidine kinase1.50E-15
WP_236900248.1 581681 582314 + 210PF00072
PF00196
PF08281
PF13412
Response_reg
GerE
Sigma70_r4_2
HTH_24
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
1.20E-24
1.10E-16
8.80E-05
7.80E-04

Results for WP_023639837.1 [Dickeya zeae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012884959.1 2116614 2115969 - 214PF01323DSBADSBA-like thioredoxin domain4.80E-05
WP_102801674.1 2117777 2116901 - 291PF00753
PF19583
Lactamase_B
ODP
Metallo-beta-lactamase superfamily
ODP family beta lactamase
1.20E-09
7.30E-05
WP_102801675.1 2117879 2118788 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-41
1.40E-14
WP_023639841.1 2118929 2120078 + 382PF07690
PF06779
MFS_1
MFS_4
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
8.90E-24
1.20E-10
WP_102801676.1 2121030 2120100 - 309PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
8.20E-19
3.80E-15
WP_023639838.1 2122303 2121562 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.70E-31
2.30E-18
2.80E-06
WP_102801677.1 2124888 2122605 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.50E-206
3.30E-43
WP_038914064.1 2125802 2124944 - 285PF01226Form_Nir_transFormate/nitrite transporter3.10E-74
WP_023639837.1 2128201 2126437 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.30E-82
2.00E-69
WP_102801678.1 2128465 2129551 + 361PF00266Aminotran_5Aminotransferase class-V5.20E-61
WP_102801679.1 2129660 2130950 + 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.60E-151
WP_019846573.1 2131171 2131858 + 228PF02224
PF13189
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
6.60E-82
9.60E-07
5.60E-04
WP_023639834.1 2131962 2133636 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
9.40E-98
5.40E-12
2.00E-06
WP_019846575.1 2133725 2134010 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
4.20E-29
6.10E-07
WP_102801680.1 2134837 2134186 - 216NO PFAM MATCH---
WP_102801681.1 2135665 2135050 - 204PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
5.40E-30
9.80E-15
WP_019846577.1 2136435 2135658 - 258PF00977
PF01207
PF03060
PF05690
His_biosynth
Dus
NMO
ThiG
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Thiazole biosynthesis protein ThiG
3.20E-75
7.20E-08
7.20E-06
1.40E-04

Results for WP_004785685.1 [Acinetobacter sp. ACNIH1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004785671.1 1291756 1293907 + 716PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.20E-27
3.80E-11
WP_004785673.1 1294580 1293971 - 202PF01914MarCMarC family integral membrane protein5.00E-14
WP_004785675.1 1296645 1294608 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.40E-174
WP_004785677.1 1296915 1297494 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
2.50E-28
1.30E-11
WP_004785680.1 1297515 1298991 + 491PF00171AldedhAldehyde dehydrogenase family5.80E-174
WP_004785682.1 1299001 1300657 + 551PF00732
PF05199
GMC_oxred_N
GMC_oxred_C
GMC oxidoreductase
GMC oxidoreductase
1.80E-97
1.70E-41
WP_104426122.1 1300784 1301567 + 260NO PFAM MATCH---
WP_004282326.1 1302435 1301553 - 293PF13612
PF01609
DDE_Tnp_1_3
DDE_Tnp_1
Transposase DDE domain
Transposase DDE domain
1.90E-25
3.40E-14
WP_004785685.1 1302891 1305090 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
9.50E-75
1.20E-73
6.90E-09
WP_004785687.1 1306089 1305252 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
6.20E-12
1.40E-04
WP_034171043.1 1306656 1307811 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
4.20E-48
5.30E-32
3.30E-29
3.20E-25
WP_004785690.1 1307843 1309043 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
1.40E-35
1.20E-27
2.90E-20
1.70E-04
WP_004785691.1 1309253 1310534 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
2.90E-60
1.80E-26
8.00E-05
1.10E-04
WP_004785693.1 1310584 1311253 + 222PF01144CoA_transCoenzyme A transferase1.20E-64
WP_004785695.1 1311252 1311927 + 224PF01144CoA_transCoenzyme A transferase4.40E-32
WP_104426124.1 1312110 1312933 + 273PF13359
PF01609
PF13613
DDE_Tnp_4
DDE_Tnp_1
HTH_Tnp_4
DDE superfamily endonuclease
Transposase DDE domain
Helix-turn-helix of DDE superfamily endonuclease
1.20E-23
4.10E-21
2.10E-11
WP_004785696.1 1314467 1313267 - 399PF07690MFS_1Major Facilitator Superfamily1.40E-28

Results for WP_023630029.1 [Pseudomonas soli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_160291389.1 223493 224258 + 254PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
6.00E-65
9.40E-50
7.80E-10
WP_038707571.1 225644 224441 - 400PF06965Na_H_antiport_1Na+/H+ antiporter 17.50E-136
WP_003201262.1 226078 227793 + 571INFERRED GENE---
WP_094011385.1 228269 227885 - 127PF13781DoxX_3DoxX-like family4.50E-15
WP_094011386.1 228718 228265 - 150PF04134DCC1-likeDCC1-like thiol-disulfide oxidoreductase4.20E-31
WP_023631435.1 228871 229075 + 67PF06945DUF1289Protein of unknown function (DUF1289)1.30E-15
WP_094011387.1 229742 229061 - 226PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)3.30E-21
WP_023630028.1 229883 230228 + 114NO PFAM MATCH---
WP_023630029.1 230355 232554 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.80E-74
1.10E-71
3.40E-08
WP_023630030.1 232792 232936 + 47NO PFAM MATCH---
WP_023630031.1 232985 233123 + 45NO PFAM MATCH---
WP_094011388.1 233718 233205 - 170PF00857IsochorismataseIsochorismatase family1.20E-14
WP_094011389.1 234883 233809 - 357PF03060
PF00478
PF01070
PF04481
PF01180
NMO
IMPDH
FMN_dh
DUF561
DHO_dh
Nitronate monooxygenase
IMP dehydrogenase / GMP reductase domain
FMN-dependent dehydrogenase
Protein of unknown function (DUF561)
Dihydroorotate dehydrogenase
1.40E-74
2.90E-10
2.50E-06
4.70E-05
7.60E-04
WP_094011390.1 235089 234918 - 56NO PFAM MATCH---
WP_023631136.1 235399 235096 - 100PF08980DUF1883Domain of unknown function (DUF1883)7.50E-35
WP_094011392.1 235560 235920 + 119NO PFAM MATCH---
WP_094011393.1 236065 236716 + 216PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
2.30E-19
3.50E-15

Results for WP_026242341.1 back to top

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Couldn't process WP_026242341.1 Genbank filestream. May be corrupt.

Results for WP_024569203.1 [Cupriavidus metallidurans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_223277464.1 1534082 1534886 + 267PF00892EamAEamA-like transporter family4.70E-19
WP_017511557.1 1535488 1534882 - 201PF00583
PF13302
PF13508
Acetyltransf_1
Acetyltransf_3
Acetyltransf_7
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
7.30E-07
9.40E-07
1.20E-04
WP_017511556.1 1535576 1536047 + 156PF01638HxlRHxlR-like helix-turn-helix2.10E-15
WP_017511555.1 1536360 1537686 + 441PF07690
PF13347
PF12832
MFS_1
MFS_2
MFS_1_like
Major Facilitator Superfamily
MFS/sugar transport protein
MFS_1 like family
2.00E-29
7.20E-06
6.40E-04
WP_017511554.1 1537723 1540285 + 853PF07992
PF01077
PF00070
PF04324
PF18267
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
Rubredoxin_C
Pyridine nucleotide-disulphide oxidoreductase
Nitrite and sulphite reductase 4Fe-4S domain
Pyridine nucleotide-disulphide oxidoreductase
BFD-like [2Fe-2S] binding domain
Rubredoxin NAD+ reductase C-terminal domain
2.50E-51
1.20E-17
3.10E-16
8.10E-15
4.70E-12
WP_017511553.1 1540310 1540724 + 137PF13806Rieske_2Rieske-like [2Fe-2S] domain7.60E-40
WP_017511552.1 1540778 1542020 + 413PF07992
PF00070
PF18267
PF13738
PF13454
Pyr_redox_2
Pyr_redox
Rubredoxin_C
Pyr_redox_3
NAD_binding_9
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Rubredoxin NAD+ reductase C-terminal domain
Pyridine nucleotide-disulphide oxidoreductase
FAD-NAD(P)-binding
1.00E-57
9.80E-20
2.20E-18
7.10E-08
4.20E-06
WP_024569204.1 1542039 1544787 + 915PF00384
PF01568
PF04879
PF04324
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_BFD
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
BFD-like [2Fe-2S] binding domain
3.60E-82
5.70E-28
1.40E-17
2.50E-13
WP_024569203.1 1547194 1544989 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.10E-72
6.30E-71
4.70E-07
WP_011519248.1 1547737 1548364 + 208PF08348
PF13309
PAS_6
HTH_22
YheO-like PAS domain
HTH domain
1.00E-34
1.70E-16
WP_215242632.1 1548353 1549334 + 326PF02423OCD_Mu_crystallOrnithine cyclodeaminase/mu-crystallin family8.80E-63
WP_011519250.1 1549357 1550326 + 322PF00291PALPPyridoxal-phosphate dependent enzyme1.90E-77
WP_223277465.1 1551780 1550388 - 463PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
2.30E-47
3.20E-06
WP_011519252.1 1553071 1552012 - 352PF01370
PF16363
PF01073
PF13460
PF04321
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_10
RmlD_sub_bind
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
3-beta hydroxysteroid dehydrogenase/isomerase family
NAD(P)H-binding
RmlD substrate binding domain
1.20E-48
5.50E-28
3.20E-06
6.10E-06
1.70E-05
WP_017515375.1 1554867 1553139 - 575PF18583
PF13231
Arnt_C
PMT_2
Aminoarabinose transferase C-terminal domain
Dolichyl-phosphate-mannose-protein mannosyltransferase
1.20E-36
5.30E-15
WP_011519254.1 1555105 1555813 + 235PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
1.10E-22
4.00E-19
WP_024570201.1 1555809 1557183 + 457PF02518
PF00512
PF08521
HATPase_c
HisKA
2CSK_N
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Two-component sensor kinase N-terminal
1.10E-13
1.30E-11
2.80E-08

Results for WP_018246199.1 back to top

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Couldn't process WP_018246199.1 Genbank filestream. May be corrupt.

Results for WP_018243193.1 back to top

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Couldn't process WP_018243193.1 Genbank filestream. May be corrupt.

Results for WP_023380317.1 [Pseudomonas sp. SK2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023380309.1 2411416 2412307 + 296PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.80E-33
2.30E-18
WP_202676101.1 2412416 2413121 + 234PF13561
PF00106
adh_short_C2
adh_short
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
3.30E-44
2.80E-32
WP_041925654.1 2413345 2414164 + 272PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 35.30E-22
WP_027907795.1 2414790 2414208 - 193PF12804NTP_transf_3MobA-like NTP transferase domain9.40E-36
WP_023380313.1 2415800 2414786 - 337PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.30E-35
1.20E-23
WP_023380314.1 2417160 2415813 - 448PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
7.90E-26
1.10E-22
WP_186599192.1 2419427 2417177 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
6.60E-35
1.60E-30
WP_023380316.1 2419882 2419426 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
4.60E-23
1.30E-07
3.90E-05
WP_023380317.1 2420143 2422333 + 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.60E-74
1.10E-72
1.60E-08
WP_023380318.1 2424172 2422336 - 611PF00990
PF08448
PF00989
PF01590
PF08447
GGDEF
PAS_4
PAS
GAF
PAS_3
Diguanylate cyclase, GGDEF domain
PAS fold
PAS fold
GAF domain
PAS fold
7.80E-42
6.00E-31
1.50E-16
3.90E-13
5.10E-10
WP_023380319.1 2424436 2425246 + 269PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
2.80E-21
1.00E-20
1.50E-14
1.50E-12
6.10E-08
WP_023380320.1 2425573 2425273 - 99PF13827DUF4189Domain of unknown function (DUF4189)7.30E-05
WP_104881849.1 2427932 2425811 - 706PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
4.50E-56
1.10E-23
WP_023380322.1 2428155 2428734 + 192NO PFAM MATCH---
WP_202676102.1 2428846 2430061 + 404PF04143Sulf_transpSulphur transport1.50E-78
WP_023380324.1 2430093 2430564 + 156PF02566OsmCOsmC-like protein5.30E-16
WP_027907799.1 2431086 2430756 - 109NO PFAM MATCH---

Results for WP_014590666.1 [Pseudomonas putida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014590659.1 18675 16929 - 581PF02028BCCTBCCT, betaine/carnitine/choline family transporter3.40E-177
WP_004577480.1 18989 19307 + 105NO PFAM MATCH---
WP_014590660.1 19315 19516 + 66PF06945DUF1289Protein of unknown function (DUF1289)1.50E-15
WP_014590661.1 19565 20207 + 213PF01810LysELysE type translocator2.60E-31
WP_014590662.1 20414 21203 + 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
4.10E-28
2.70E-05
WP_014590663.1 22615 21271 - 447PF00034
PF13442
PF09698
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
8.00E-25
4.30E-21
5.00E-04
WP_014590664.1 24886 22633 - 750PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
7.30E-34
2.00E-30
WP_014590665.1 25341 24885 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.10E-22
4.60E-08
5.70E-06
WP_014590666.1 25611 27798 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.20E-73
1.80E-72
7.60E-08
WP_070383800.1 28886 28007 - 292PF20455DUF6708Family of unknown function (DUF6708)3.90E-09
WP_010953532.1 28890 30054 + 388INFERRED GENE---

Results for WP_004709882.1 [Acinetobacter nosocomialis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004709874.1 2140202 2141036 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
4.90E-48
3.20E-41
9.90E-13
WP_004709875.1 2141059 2142583 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.40E-17
8.70E-14
1.70E-12
1.90E-10
2.60E-07
WP_004709876.1 2142694 2143570 + 291PF04072LCMLeucine carboxyl methyltransferase1.10E-38
WP_004709877.1 2144595 2143581 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.70E-39
8.00E-15
6.00E-06
WP_004709878.1 2144731 2146219 + 495PF00743
PF13738
PF13450
PF07992
PF13434
FMO-like
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
6.50E-20
4.60E-17
2.70E-11
4.40E-10
9.40E-09
WP_004709879.1 2146263 2147118 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3.10E-50
3.60E-36
7.40E-11
WP_004709880.1 2147190 2148084 + 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
2.00E-55
2.20E-11
2.90E-08
5.50E-05
3.90E-04
WP_004709881.1 2148112 2149783 + 556PF05199
PF00732
PF01266
PF13450
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
1.20E-17
1.50E-09
2.30E-05
2.60E-05
WP_004709882.1 2152046 2149847 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.10E-74
5.50E-73
1.80E-08
WP_004709883.1 2153578 2152297 - 426PF03573OprDouter membrane porin, OprD family4.00E-104
WP_004709884.1 2154956 2153609 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
1.60E-47
6.80E-26
2.30E-09
WP_004709887.1 2155447 2156524 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
4.50E-54
8.50E-19
1.50E-05
WP_004709889.1 2156536 2157481 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
2.60E-12
4.50E-06
WP_080631563.1 2158217 2157524 - 230PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
1.70E-11
3.90E-11
WP_000252463.1 2158782 2158323 - 152PF01047
PF12802
PF13412
PF01978
MarR
MarR_2
HTH_24
TrmB
MarR family
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
7.20E-10
6.20E-09
3.90E-05
4.80E-04
WP_000411707.1 2160085 2158852 - 410PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
3.40E-51
3.10E-24
1.40E-10
WP_169538806.1 2160334 2161174 + 279PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.90E-55
2.00E-25

Results for WP_004973821.1 [Acinetobacter towneri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_096902340.1 9366 8910 - 151PF01220DHquinase_IIDehydroquinase class II2.50E-60
WP_104851943.1 11740 10333 - 468PF00512
PF02518
PF08521
HisKA
HATPase_c
2CSK_N
His Kinase A (phospho-acceptor) domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Two-component sensor kinase N-terminal
5.00E-10
2.20E-09
3.50E-09
WP_104851944.1 12405 11736 - 222PF00072
PF00486
PF06490
Response_reg
Trans_reg_C
FleQ
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
Flagellar regulatory protein FleQ
1.70E-24
2.00E-22
2.50E-05
WP_253116781.1 12575 14639 + 687PF11412
PF02683
PF13899
PF00085
PF13098
DsbC
DsbD
Thioredoxin_7
Thioredoxin
Thioredoxin_2
Disulphide bond corrector protein DsbC
Cytochrome C biogenesis protein transmembrane region
Thioredoxin-like
Thioredoxin
Thioredoxin-like domain
3.60E-25
9.10E-16
6.20E-09
1.80E-08
1.00E-06
WP_104851946.1 14635 15466 + 276PF00578
PF08534
PF00085
PF13098
PF13905
AhpC-TSA
Redoxin
Thioredoxin
Thioredoxin_2
Thioredoxin_8
AhpC/TSA family
Redoxin
Thioredoxin
Thioredoxin-like domain
Thioredoxin-like
8.90E-14
4.60E-12
6.70E-08
2.10E-07
2.20E-07
WP_004973828.1 15526 16285 + 252PF13098
PF13462
Thioredoxin_2
Thioredoxin_4
Thioredoxin-like domain
Thioredoxin
2.30E-14
8.50E-09
WP_178319301.1 17024 16394 - 209PF13649
PF03848
PF08241
PF08242
Methyltransf_25
TehB
Methyltransf_11
Methyltransf_12
Methyltransferase domain
Tellurite resistance protein TehB
Methyltransferase domain
Methyltransferase domain
2.00E-10
1.30E-05
2.10E-05
7.90E-04
WP_004973824.1 17402 17054 - 115PF02627CMDCarboxymuconolactone decarboxylase family1.40E-20
WP_004973821.1 17695 19903 + 735PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.10E-75
2.90E-73
1.50E-08
WP_004973819.1 20398 20083 - 104PF01381
PF13560
PF15731
PF20432
PF12844
HTH_3
HTH_31
MqsA_antitoxin
Xre-like-HTH
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Antitoxin component of bacterial toxin-antitoxin system, MqsA
Antitoxin Xre-like helix-turn-helix domain
Helix-turn-helix domain
9.40E-08
5.20E-06
4.50E-05
1.80E-04
3.60E-04
WP_253116783.1 22109 20813 - 431PF00817
PF11799
PF13438
PF11798
PF11731
IMS
IMS_C
DUF4113
IMS_HHH
Cdd1
impB/mucB/samB family
impB/mucB/samB family C-terminal domain
Domain of unknown function (DUF4113)
IMS family HHH motif
Pathogenicity locus
1.00E-27
1.30E-12
9.30E-08
1.20E-05
5.70E-04
WP_253116785.1 22764 22149 - 204PF00717Peptidase_S24Peptidase S24-like1.40E-16
WP_168419301.1 22961 23543 + 193NO PFAM MATCH---
WP_253116787.1 23635 24823 + 395PF01636
PF06293
PF07914
PF01633
PF02958
APH
Kdo
DUF1679
Choline_kinase
EcKL
Phosphotransferase enzyme family
Lipopolysaccharide kinase (Kdo/WaaP) family
Uncharacterized oxidoreductase dhs-27
Choline/ethanolamine kinase
Ecdysteroid kinase-like family
8.50E-22
6.70E-05
1.10E-04
3.20E-04
9.20E-04
WP_253116789.1 26474 25469 - 334PF13379
PF09084
NMT1_2
NMT1
NMT1-like family
NMT1/THI5 like
7.80E-54
9.80E-07
WP_070154220.1 27063 26484 - 192PF03861
PF00072
ANTAR
Response_reg
ANTAR domain
Response regulator receiver domain
7.50E-14
6.00E-05

Results for WP_062758065.1 [Streptomyces sp. WAC00288] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_062758071.1 6414643 6413233 - 469PF04434SWIMSWIM zinc finger4.70E-04
WP_234363849.1 6416370 6414738 - 543PF09423
PF16655
PhoD
PhoD_N
PhoD-like phosphatase
PhoD-like phosphatase, N-terminal domain
1.50E-80
4.30E-15
WP_079131411.1 6418150 6416548 - 533PF00155
PF00392
PF14502
Aminotran_1_2
GntR
HTH_41
Aminotransferase class I and II
Bacterial regulatory proteins, gntR family
Helix-turn-helix domain
1.10E-17
7.60E-16
5.70E-04
WP_062758069.1 6418333 6418504 + 56PF01783Ribosomal_L32pRibosomal L32p protein family3.40E-11
WP_062759258.1 6418509 6419676 + 388PF02492
PF07683
PF03308
PF03193
cobW
CobW_C
MeaB
RsgA_GTPase
CobW/HypB/UreG, nucleotide-binding domain
Cobalamin synthesis protein cobW C-terminal domain
Methylmalonyl Co-A mutase-associated GTPase MeaB
RsgA GTPase
1.30E-58
2.20E-22
6.90E-04
8.20E-04
WP_079131410.1 6421655 6419831 - 607PF00005
PF00664
PF02463
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.70E-25
1.10E-11
2.50E-06
8.40E-06
WP_062758067.1 6423391 6421651 - 579PF00005
PF00664
PF02463
PF13191
PF13555
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_29
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
P-loop containing region of AAA domain
2.00E-31
3.50E-13
3.80E-06
3.50E-05
2.20E-04
WP_234363850.1 6424269 6423387 - 293PF00881NitroreductaseNitroreductase family3.50E-07
WP_062758065.1 6426173 6424793 - 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-39
WP_062758062.1 6427651 6426169 - 493PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
3.80E-36
4.40E-19
WP_018470988.1 6427806 6428628 + 274INFERRED GENE---
WP_243900507.1 6428833 6428719 - 37NO PFAM MATCH---
WP_229991533.1 6429717 6428889 - 275PF00005
PF13304
PF13191
PF02463
ABC_tran
AAA_21
AAA_16
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
RecF/RecN/SMC N terminal domain
2.30E-30
1.00E-07
7.90E-05
8.70E-05
WP_062758060.1 6430745 6429737 - 335PF01032FecCDFecCD transport family1.30E-68
WP_229991534.1 6431899 6430741 - 385PF01032FecCDFecCD transport family2.30E-66
WP_062758057.1 6433005 6432021 - 327PF01497Peripla_BP_2Periplasmic binding protein3.40E-17
WP_062758055.1 6433092 6434286 + 397NO PFAM MATCH---

Results for WP_062760655.1 [Streptomyces sp. WAC00288] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009332786.1 57285 57699 + 138INFERRED GENE---
WP_159057864.1 58236 57789 - 148NO PFAM MATCH---
WP_104860753.1 59001 58641 - 119PF19817DUF6300Family of unknown function (DUF6300)3.10E-32
WP_062760650.1 62585 58997 - 1195PF07733
PF17657
PF02811
PF14579
PF01336
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Bacterial DNA polymerase III alpha NTPase domain
Bacterial DNA polymerase III alpha subunit finger domain
PHP domain
Helix-hairpin-helix motif
OB-fold nucleic acid binding domain
5.00E-86
2.70E-57
2.70E-42
4.00E-26
2.40E-07
WP_062760651.1 64998 63036 - 653PF16861
PF02543
Carbam_trans_C
Carbam_trans_N
Carbamoyltransferase C-terminus
Carbamoyltransferase N-terminus
8.60E-58
8.30E-08
WP_062760652.1 65792 65033 - 252PF13649
PF08241
PF13489
PF13847
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.00E-14
9.40E-14
1.00E-09
9.20E-07
1.30E-05
WP_159057865.1 67075 65890 - 394PF08007
PF13621
JmjC_2
Cupin_8
JmjC domain
Cupin-like domain
7.30E-18
3.50E-05
WP_079131595.1 67920 69285 + 454PF07812TfuATfuA-like protein7.00E-43
WP_062760655.1 69286 70477 + 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-58
WP_062760656.1 70506 71796 + 429PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
3.40E-28
3.40E-15
WP_159057866.1 72004 73207 + 400NO PFAM MATCH---
WP_062760657.1 73988 73241 - 248PF07505DUF5131Protein of unknown function (DUF5131)2.70E-92
WP_062760658.1 74784 74394 - 129NO PFAM MATCH---
WP_234363964.1 75521 74891 - 209PF05258DciADna[CI] antecedent, DciA5.50E-06
WP_234363960.1 75931 75640 - 96NO PFAM MATCH---
WP_062760640.1 76187 76523 + 111NO PFAM MATCH---
WP_063915301.1 77235 77745 + 169NO PFAM MATCH---

Results for WP_000193004.1 [Bacillus cereus group sp. TH243-1LC] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000650060.1 36196 36982 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
6.60E-06
2.60E-05
6.40E-04
WP_061403188.1 37001 38237 + 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
2.40E-23
7.10E-06
1.50E-04
WP_000336279.1 38705 38276 - 142NO PFAM MATCH---
WP_071679304.1 38904 40239 + 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
2.10E-64
2.30E-20
6.00E-17
5.00E-15
3.40E-10
WP_071679305.1 40338 40827 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.20E-11
3.10E-07
1.20E-05
WP_000996805.1 40973 41384 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.10E-51
WP_071679306.1 42005 41414 - 196PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.30E-17
1.80E-16
1.90E-15
7.10E-11
1.20E-10
WP_071679307.1 43638 42096 - 513PF00881NitroreductaseNitroreductase family5.20E-12
WP_000193004.1 45603 43653 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-83
WP_270682645.1 47519 45599 - 639NO PFAM MATCH---
WP_000569898.1 48904 47644 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_000197145.1 51907 49039 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.60E-63
5.10E-55
1.00E-36
WP_000428506.1 52732 52942 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_001109924.1 52944 53322 + 125NO PFAM MATCH---
WP_001178301.1 53350 53533 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001036565.1 53667 54027 + 119NO PFAM MATCH---
WP_001195379.1 54045 54315 + 89NO PFAM MATCH---

Results for WP_027511799.1 [Rhizobium sullae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_027511791.1 3395092 3396307 + 404PF01494
PF01266
PF04820
PF07992
PF05834
FAD_binding_3
DAO
Trp_halogenase
Pyr_redox_2
Lycopene_cycl
FAD binding domain
FAD dependent oxidoreductase
Tryptophan halogenase
Pyridine nucleotide-disulphide oxidoreductase
Lycopene cyclase protein
3.30E-28
6.50E-08
1.60E-07
2.50E-06
6.20E-05
WP_027511792.1 3396492 3396303 - 62PF03966Trm112pTrm112p-like protein3.50E-10
WP_027511793.1 3397186 3396502 - 227PF02190LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain5.40E-22
WP_027511794.1 3398262 3397290 - 323PF14561
PF00085
PF14559
PF13098
PF13905
TPR_20
Thioredoxin
TPR_19
Thioredoxin_2
Thioredoxin_8
Tetratricopeptide repeat
Thioredoxin
Tetratricopeptide repeat
Thioredoxin-like domain
Thioredoxin-like
2.40E-27
1.50E-25
1.10E-15
8.70E-07
1.20E-05
WP_027511795.1 3398824 3398314 - 169PF04073tRNA_editAminoacyl-tRNA editing domain2.80E-24
WP_051336704.1 3399885 3399420 - 154PF01475FURFerric uptake regulator family6.40E-08
WP_027511797.1 3400610 3400814 + 67NO PFAM MATCH---
WP_027511798.1 3400893 3401718 + 274NO PFAM MATCH---
WP_027511799.1 3401722 3403012 + 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-53
WP_027511800.1 3403021 3403810 + 262PF00881NitroreductaseNitroreductase family3.80E-11
WP_027511801.1 3403813 3405025 + 403PF01135
PF13649
PF13847
PF08241
PF13489
PCMT
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_23
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.40E-27
1.90E-11
7.10E-11
9.20E-08
1.70E-06
WP_027511802.1 3405048 3405612 + 187PF02566OsmCOsmC-like protein1.00E-12
WP_027511803.1 3405631 3406144 + 170NO PFAM MATCH---
WP_012755361.1 3406224 3406876 + 217INFERRED GENE---
WP_027511804.1 3407284 3406966 - 105NO PFAM MATCH---
WP_027513959.1 3408566 3407528 - 345PF02371
PF01548
Transposase_20
DEDD_Tnp_IS110
Transposase IS116/IS110/IS902 family
Transposase
4.10E-20
1.20E-15
WP_027513948.1 3409020 3409734 + 237PF04255DUF433Protein of unknown function (DUF433)1.00E-04

Results for WP_027511388.1 [Rhizobium sullae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_027511396.1 203706 204375 + 222PF04290DctQTripartite ATP-independent periplasmic transporters, DctQ component1.20E-25
WP_027511395.1 204371 206114 + 580PF06808DctMTripartite ATP-independent periplasmic transporter, DctM component4.80E-72
WP_027511394.1 206535 206175 - 119PF03779SPWSPW repeat2.40E-26
WP_027511393.1 206790 207075 + 94PF00708AcylphosphataseAcylphosphatase2.10E-22
WP_051336677.1 207416 207218 - 65NO PFAM MATCH---
WP_027511391.1 207914 208352 + 145PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
2.30E-10
6.90E-08
8.70E-08
WP_027511390.1 208361 210206 + 614PF07719
PF13428
PF14559
PF13431
PF12895
TPR_2
TPR_14
TPR_19
TPR_17
ANAPC3
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Anaphase-promoting complex, cyclosome, subunit 3
7.70E-08
6.00E-06
2.30E-05
6.40E-05
8.50E-04
WP_027511389.1 210230 210455 + 74NO PFAM MATCH---
WP_027511388.1 210503 211661 + 385PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-68
WP_027511387.1 211657 212356 + 232PF07812TfuATfuA-like protein1.30E-42
WP_027511386.1 212461 212719 + 85NO PFAM MATCH---
WP_027511384.1 214323 213876 - 148PF00583
PF13673
PF13508
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.30E-13
2.00E-09
3.20E-09
WP_244914700.1 215517 214650 - 288PF00294PfkBpfkB family carbohydrate kinase2.10E-36
WP_027511382.1 216453 215631 - 273PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.70E-21
WP_027511381.1 217388 216452 - 311PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.90E-21
WP_027511380.1 218719 217387 - 443PF01547
PF13416
PF10518
SBP_bac_1
SBP_bac_8
TAT_signal
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
TAT (twin-arginine translocation) pathway signal sequence
1.60E-38
3.20E-27
2.20E-04
WP_037142638.1 219433 218773 - 219PF07729
PF00392
PF13412
FCD
GntR
HTH_24
FCD domain
Bacterial regulatory proteins, gntR family
Winged helix-turn-helix DNA-binding
3.90E-18
7.10E-07
8.30E-04

Results for WP_000192974.1 back to top

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Couldn't process WP_000192974.1 Genbank filestream. May be corrupt.

Results for WP_066198254.1 [Cytobacillus horneckiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000608415.1 4715 4805 + 30INFERRED GENE---
WP_066198277.1 6276 5172 - 367PF00589
PF02899
PF13102
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage integrase family
Phage integrase, N-terminal SAM-like domain
Phage integrase SAM-like domain
1.00E-28
4.30E-07
6.10E-04
WP_241504156.1 8317 6727 - 529PF01663PhosphodiestType I phosphodiesterase / nucleotide pyrophosphatase7.30E-20
WP_066198267.1 8882 8378 - 167PF01569
PF14378
PAP2
PAP2_3
PAP2 superfamily
PAP2 superfamily
1.40E-17
2.10E-07
WP_066198264.1 9403 10666 + 420PF07690MFS_1Major Facilitator Superfamily3.30E-31
WP_066198261.1 10893 11373 + 159NO PFAM MATCH---
WP_083957389.1 11665 11917 + 83NO PFAM MATCH---
WP_066198257.1 12064 14026 + 653PF00899ThiFThiF family7.90E-07
WP_066198254.1 14022 15963 + 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.00E-86
WP_066198251.1 15990 17568 + 525PF00881NitroreductaseNitroreductase family6.50E-13
WP_066198249.1 17783 18896 + 370PF13354Beta-lactamase2Beta-lactamase enzyme family1.40E-18
WP_015594404.1 19111 19228 + 39INFERRED GENE---
WP_066198247.1 19430 20528 + 365PF09983DUF2220Uncharacterized protein conserved in bacteria C-term(DUF2220)2.50E-09
WP_241504157.1 20518 22030 + 503NO PFAM MATCH---
WP_241504158.1 22026 22776 + 249PF19539DUF6063Family of unknown function (DUF6063)7.40E-18
WP_066198237.1 22753 27217 + 1487NO PFAM MATCH---
WP_066198234.1 29106 27936 - 389PF05504Spore_GerACSpore germination B3/ GerAC like, C-terminal1.10E-22

Results for WP_046162068.1 [Stutzerimonas stutzeri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_052724728.1 612157 614218 + 686PF13245
PF13538
PF04851
PF00580
AAA_19
UvrD_C_2
ResIII
UvrD-helicase
AAA domain
UvrD-like helicase C-terminal domain
Type III restriction enzyme, res subunit
UvrD/REP helicase N-terminal domain
1.20E-07
1.10E-06
5.00E-06
9.30E-06
WP_200598856.1 614220 614871 + 216NO PFAM MATCH---
WP_076611480.1 615262 615447 + 61INFERRED GENE---
WP_045429099.1 616614 615711 - 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.30E-41
9.40E-19
WP_046162071.1 616759 617965 + 401PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
9.10E-46
5.50E-15
1.50E-08
WP_046162070.1 618599 618239 - 119PF00816Histone_HNSH-NS histone family1.50E-04
WP_052724726.1 620906 618950 - 651PF00015
PF00672
PF12729
MCPsignal
HAMP
4HB_MCP_1
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
Four helix bundle sensory module for signal transduction
2.60E-43
3.90E-13
2.10E-05
WP_011544394.1 621115 621518 + 134INFERRED GENE---
WP_046162068.1 621727 623932 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.30E-73
2.60E-71
4.70E-08
WP_046162067.1 625254 624012 - 413PF04230PS_pyruv_transPolysaccharide pyruvyl transferase5.30E-24
WP_046162066.1 626522 625250 - 423PF14667
PF01943
PF01554
PF13440
Polysacc_synt_C
Polysacc_synt
MatE
Polysacc_synt_3
Polysaccharide biosynthesis C-terminal domain
Polysaccharide biosynthesis protein
MatE
Polysaccharide biosynthesis protein
1.50E-12
3.80E-11
2.80E-08
2.50E-07
WP_046162065.1 626838 627714 + 291PF03631Virul_fac_BrkBVirulence factor BrkB2.60E-68
WP_046162064.1 627892 629008 + 371PF13692
PF13439
PF00534
PF13579
PF13524
Glyco_trans_1_4
Glyco_transf_4
Glycos_transf_1
Glyco_trans_4_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyl transferases group 1
2.60E-21
6.20E-20
1.30E-19
2.20E-13
3.20E-07
WP_046162063.1 629000 629765 + 254PF10096DUF2334Uncharacterized protein conserved in bacteria (DUF2334)1.20E-26
WP_046162062.1 629761 630754 + 330PF03706LPG_synthase_TMLysylphosphatidylglycerol synthase TM region7.10E-42
WP_046162061.1 630843 631035 + 63PF05532CsbDCsbD-like7.70E-17
WP_019342347.1 631412 631088 - 107PF11953
PF00037
PF13237
PF12838
PF13484
DUF3470
Fer4
Fer4_10
Fer4_7
Fer4_16
Domain of unknown function (DUF3470)
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S double cluster binding domain
3.10E-23
1.60E-08
5.20E-07
2.50E-06
2.50E-06

Results for WP_028698109.1 [Pseudomonas monteilii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_198554900.1 0 110 + 35PF13817DDE_Tnp_IS66_CIS66 C-terminal element6.00E-10
WP_028698109.1 1001 2156 + 384PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-22
WP_021783888.1 2157 3813 + 551PF00005
PF00664
PF02463
PF13304
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
1.80E-19
1.20E-06
2.20E-05
6.10E-05
1.10E-04
WP_021783887.1 5235 3837 - 465PF03796
PF00772
PF13481
PF06745
PF13671
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
DnaB-like helicase C terminal domain
DnaB-like helicase N terminal domain
AAA domain
KaiC
AAA domain
4.10E-113
3.00E-36
1.90E-12
9.70E-08
1.20E-04
WP_003249568.1 5795 5348 - 148PF03948
PF01281
Ribosomal_L9_C
Ribosomal_L9_N
Ribosomal protein L9, C-terminal domain
Ribosomal protein L9, N-terminal domain
1.30E-27
5.60E-19
WP_021783886.1 6679 5815 - 287NO PFAM MATCH---
WP_003249563.1 6943 6712 - 76PF01084Ribosomal_S18Ribosomal protein S184.90E-24
WP_021783885.1 7397 6971 - 141PF01250Ribosomal_S6Ribosomal protein S62.20E-25
WP_101196348.1 8449 7702 - 248PF00588
PF08032
SpoU_methylase
SpoU_sub_bind
SpoU rRNA Methylase family
RNA 2'-O ribose methyltransferase substrate binding
6.00E-40
3.80E-21
WP_021783884.1 11019 8445 - 857PF00773
PF17876
PF08206
PF00575
PF08461
RNB
CSD2
OB_RNB
S1
HTH_12
RNB domain
Cold shock domain
Ribonuclease B OB domain
S1 RNA binding domain
Ribonuclease R winged-helix domain
9.30E-106
7.00E-24
3.10E-21
9.20E-14
1.30E-08

Results for WP_021782011.1 [Pseudomonas monteilii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012052026.1 0 956 + 318INFERRED GENE---
WP_031321994.1 958 1852 + 297PF20455DUF6708Family of unknown function (DUF6708)4.50E-07
WP_080671075.1 2116 2995 + 292PF20455DUF6708Family of unknown function (DUF6708)9.60E-08
WP_021782011.1 5391 3204 - 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.50E-73
2.00E-72
8.00E-08
WP_021782012.1 5661 6117 + 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.30E-22
3.90E-08
1.40E-05
WP_021782013.1 6116 8369 + 750PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
3.70E-33
1.80E-30
7.60E-04
WP_021782014.1 8385 9729 + 447PF00034
PF13442
PF09698
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
3.20E-24
2.60E-22
5.10E-04
WP_021782015.1 10586 9797 - 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
1.00E-27
8.40E-05
WP_021782016.1 11435 10793 - 213PF01810LysELysE type translocator1.00E-30
WP_021782017.1 11685 11484 - 66PF06945DUF1289Protein of unknown function (DUF1289)3.30E-15
WP_021782018.1 12011 11693 - 105NO PFAM MATCH---
WP_021782019.1 12325 14071 + 581PF02028BCCTBCCT, betaine/carnitine/choline family transporter2.50E-177

Results for WP_000615606.1 back to top

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Couldn't process WP_000615606.1 Genbank filestream. May be corrupt.

Results for WP_015270708.1 [Pseudomonas asiatica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003259233.1 95741 96059 + 105NO PFAM MATCH---
WP_003259230.1 96067 96268 + 66PF06945DUF1289Protein of unknown function (DUF1289)4.00E-15
WP_015270713.1 96318 96960 + 213PF01810LysELysE type translocator3.10E-30
WP_015270712.1 97126 97915 + 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
5.10E-27
7.10E-05
WP_015270711.1 99064 98044 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.80E-35
2.60E-23
WP_015270710.1 100434 99090 - 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
2.70E-25
4.40E-23
WP_015270709.1 102701 100451 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
2.50E-33
2.00E-30
WP_003259224.1 103156 102700 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.30E-22
3.80E-08
4.70E-05
WP_015270708.1 103545 105732 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-73
1.90E-72
4.70E-08
WP_015270707.1 106013 106826 + 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
2.40E-21
3.00E-21
2.10E-15
3.10E-13
5.10E-09
WP_003260568.1 107143 106843 - 99PF13827DUF4189Domain of unknown function (DUF4189)6.90E-05
WP_015270706.1 109493 107363 - 709PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.90E-56
1.90E-23
WP_013973000.1 109721 110303 + 193NO PFAM MATCH---
WP_015270705.1 111072 110307 - 254PF13646
PF08713
HEAT_2
DNA_alkylation
HEAT repeats
DNA alkylation repair enzyme
1.10E-04
1.50E-04
WP_015270704.1 111276 111795 + 172PF04657DMT_YdcZPutative inner membrane exporter, YdcZ2.10E-38
WP_015270703.1 112704 111795 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
8.80E-26
2.20E-15
WP_023660807.1 113295 112965 - 109NO PFAM MATCH---

Results for WP_072925811.1 [Chimaeribacter arupi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_101857450.1 68047 68911 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.40E-86
WP_101857451.1 68974 69574 + 199PF02613Nitrate_red_delNitrate reductase delta subunit3.60E-23
CYR23_RS22345 69573 69816 + 81INFERRED GENE---
WP_241522884.1 69894 70134 + 79PF12838
PF00037
PF13187
PF14697
Fer4_7
Fer4
Fer4_9
Fer4_21
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.90E-06
1.10E-04
4.40E-04
4.40E-04
WP_072925823.1 70245 71391 + 381PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
5.80E-25
4.60E-08
7.10E-07
5.10E-05
WP_072925820.1 72183 71442 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.70E-30
1.80E-18
4.00E-06
WP_072925817.1 74700 72417 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.00E-208
6.90E-44
WP_072925814.1 75617 74759 - 285PF01226Form_Nir_transFormate/nitrite transporter1.70E-74
WP_072925811.1 77839 76081 - 585PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.50E-82
6.30E-67
WP_072925809.1 78076 78769 + 230PF04239DUF421Protein of unknown function (DUF421)1.90E-14
WP_072925806.1 78983 80069 + 361PF00266Aminotran_5Aminotransferase class-V7.00E-67
WP_101857492.1 80186 81473 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-150
WP_072925803.1 81681 82371 + 229PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
4.10E-82
2.90E-08
4.80E-05
9.40E-05
6.10E-04
WP_072925799.1 82493 84167 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.60E-98
1.60E-11
2.80E-07
WP_072925795.1 84227 84512 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.00E-28
7.10E-07
WP_241522882.1 84803 87023 + 739PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
3.40E-47
1.20E-17
1.10E-12
5.70E-04
WP_072925788.1 87059 88808 + 582PF00664
PF00005
PF02463
PF00270
PF03193
ABC_membrane
ABC_tran
SMC_N
DEAD
RsgA_GTPase
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
RsgA GTPase
7.40E-60
2.80E-35
1.50E-09
1.10E-05
3.30E-05

Results for WP_028599329.1 [Paenibacillus sp. B01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_164820112.1 354621 354759 + 45NO PFAM MATCH---
WP_255309619.1 354797 354923 + 41NO PFAM MATCH---
WP_164820113.1 354962 355100 + 45NO PFAM MATCH---
WP_153782599.1 355297 356506 + 402PF02163
PF11667
PF13398
Peptidase_M50
DUF3267
Peptidase_M50B
Peptidase family M50
Putative zincin peptidase
Peptidase M50B-like
1.50E-07
1.10E-04
2.10E-04
WP_028599326.1 356539 357436 + 298PF00005
PF13732
PF13304
ABC_tran
DUF4162
AAA_21
ABC transporter
Domain of unknown function (DUF4162)
AAA domain, putative AbiEii toxin, Type IV TA system
1.00E-26
6.30E-15
3.40E-06
WP_153782600.1 357432 358674 + 413PF12698
PF12679
ABC2_membrane_3
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 family transporter protein
7.20E-46
3.90E-05
WP_153782601.1 358686 359535 + 282PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
5.80E-66
2.40E-52
3.60E-10
WP_153782602.1 359869 360694 + 274PF13649
PF13847
PF08241
PF08242
PF13489
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
7.60E-17
4.90E-15
1.80E-14
3.80E-14
1.40E-12
WP_028599328.1 360690 361281 + 196NO PFAM MATCH---
WP_028599329.1 361277 362657 + 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.00E-69
WP_153782603.1 362727 363498 + 256NO PFAM MATCH---
WP_153782604.1 363494 364031 + 178PF00392GntRBacterial regulatory proteins, gntR family6.00E-17
WP_084137366.1 364279 365200 + 306PF00348polyprenyl_syntPolyprenyl synthetase1.30E-19
WP_153782606.1 365521 365701 + 59PF05952ComXBacillus competence pheromone ComX4.50E-14
WP_153782607.1 365720 368087 + 788PF02518
PF07730
HATPase_c
HisKA_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase
7.40E-09
1.30E-08
WP_028599332.1 368058 368724 + 221PF00072
PF00196
PF08281
PF13518
Response_reg
GerE
Sigma70_r4_2
HTH_28
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Helix-turn-helix domain
1.40E-25
3.50E-16
2.20E-04
2.50E-04
WP_028599333.1 368898 369102 + 67PF00313CSD'Cold-shock' DNA-binding domain5.60E-31
WP_028599334.1 369188 369419 + 76PF14169YdjOCold-inducible protein YdjO1.20E-27

Results for WP_028901030.1 [Prevotella timonensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008125604.1 32462 32750 + 95PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.80E-24
1.20E-04
WP_195252557.1 32746 34120 + 457PF00216Bac_DNA_bindingBacterial DNA-binding protein2.90E-18
WP_008125607.1 36064 34489 - 524PF10150
PF00575
RNase_E_G
S1
Ribonuclease E/G family
S1 RNA binding domain
1.00E-91
9.40E-04
WP_008125609.1 36662 36377 - 94PF00216
PF18291
PF14908
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81 eukaryotic HU domain 1
4.40E-27
3.40E-07
1.00E-04
WP_025072928.1 37371 38601 + 409PF00589
PF13102
PF17293
Phage_integrase
Phage_int_SAM_5
Arm-DNA-bind_5
Phage integrase family
Phage integrase SAM-like domain
Arm DNA-binding domain
1.60E-17
3.50E-10
5.00E-10
WP_169337618.1 38634 39951 + 438PF00589
PF13102
PF17293
Phage_integrase
Phage_int_SAM_5
Arm-DNA-bind_5
Phage integrase family
Phage integrase SAM-like domain
Arm DNA-binding domain
1.70E-19
7.10E-15
3.70E-07
WP_025072926.1 39947 40373 + 141NO PFAM MATCH---
WP_025072925.1 41036 41996 + 319NO PFAM MATCH---
WP_028901030.1 41997 43305 + 435PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-58
WP_025072924.1 43349 44210 + 286PF00881
PF14512
Nitroreductase
TM1586_NiRdase
Nitroreductase family
Putative TM nitroreductase
4.30E-16
1.40E-04
WP_025072923.1 44202 45069 + 288PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
3.20E-16
6.60E-08
WP_028901029.1 45073 45784 + 236PF01061ABC2_membraneABC-2 type transporter4.10E-11
WP_145992961.1 45862 46531 + 222PF13174
PF07719
TPR_6
TPR_2
Tetratricopeptide repeat
Tetratricopeptide repeat
1.30E-04
9.00E-04
WP_025072920.1 46538 48632 + 697PF13715
PF13620
CarbopepD_reg_2
CarboxypepD_reg
CarboxypepD_reg-like domain
Carboxypeptidase regulatory-like domain
6.00E-11
8.30E-04
WP_006046419.1 49377 49563 + 62INFERRED GENE---

Results for WP_048669669.1 [Vibrio crassostreae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048664392.1 230 752 + 173PF13527
PF13508
PF00583
PF02474
PF13673
Acetyltransf_9
Acetyltransf_7
Acetyltransf_1
NodA
Acetyltransf_10
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Nodulation protein A (NodA)
Acetyltransferase (GNAT) domain
2.30E-08
6.10E-07
4.20E-06
4.70E-05
7.40E-05
WP_230683457.1 1368 1974 + 201PF01810LysELysE type translocator2.40E-27
WP_230683456.1 3586 2107 - 492PF00005
PF00664
PF13304
PF13555
ABC_tran
ABC_membrane
AAA_21
AAA_29
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
5.80E-17
1.10E-12
8.00E-07
9.80E-04
WP_048669669.1 4749 3585 - 387PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-17
WP_048662792.1 7206 6066 - 379PF14281PDDEXK_4PD-(D/E)XK nuclease superfamily8.40E-31
WP_048662791.1 7641 10980 + 1113PF05057
PF12697
PF07819
DUF676
Abhydrolase_6
PGAP1
Putative serine esterase (DUF676)
Alpha/beta hydrolase family
PGAP1-like protein
1.70E-05
2.20E-05
7.70E-04

Results for WP_074871316.1 [Pseudomonas sp. FW305-47B] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074871329.1 39715 41113 + 465PF07690
PF00083
PF12832
MFS_1
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
MFS_1 like family
1.40E-50
1.00E-08
9.70E-05
WP_008145505.1 41122 41653 + 176PF00436SSBSingle-strand binding protein family7.10E-38
WP_102615731.1 43347 41850 - 498PF00155
PF00392
Aminotran_1_2
GntR
Aminotransferase class I and II
Bacterial regulatory proteins, gntR family
2.70E-21
6.20E-12
WP_102615732.1 43514 44768 + 417PF03594BenEBenzoate membrane transport protein7.90E-127
WP_102615733.1 44767 45613 + 281PF01168Ala_racemase_NAlanine racemase, N-terminal domain6.60E-22
WP_256581187.1 45637 45817 + 59NO PFAM MATCH---
WP_102615734.1 45910 47176 + 421PF00464SHMTSerine hydroxymethyltransferase8.50E-167
WP_102615735.1 47309 47999 + 229PF03358
PF12724
FMN_red
Flavodoxin_5
NADPH-dependent FMN reductase
Flavodoxin domain
2.00E-15
5.90E-07
WP_074871316.1 50345 48140 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.60E-73
1.50E-72
3.20E-08
WP_102615736.1 51039 50484 - 184PF00857IsochorismataseIsochorismatase family1.20E-35
WP_102615737.1 51141 52134 + 330PF12833
PF00165
PF01965
HTH_18
HTH_AraC
DJ-1_PfpI
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
DJ-1/PfpI family
9.00E-24
9.20E-14
5.30E-11
WP_076029577.1 52341 53451 + 369PF11379DUF3182Protein of unknown function (DUF3182)1.40E-134
WP_074871310.1 53440 54199 + 252PF00326
PF12697
PF00561
PF12146
PF05728
Peptidase_S9
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
UPF0227
Prolyl oligopeptidase family
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Uncharacterised protein family (UPF0227)
9.50E-13
1.50E-10
1.80E-08
1.80E-06
4.90E-05
WP_102615738.1 55230 54243 - 328PF03706LPG_synthase_TMLysylphosphatidylglycerol synthase TM region1.90E-13
WP_076029579.1 56513 55229 - 427PF13091
PF00614
PLDc_2
PLDc
PLD-like domain
Phospholipase D Active site motif
1.50E-40
1.80E-12
WP_074871304.1 57307 56509 - 265PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family2.50E-14
WP_074871303.1 58230 57303 - 308PF01904DUF72Protein of unknown function DUF729.50E-70

Results for WP_009902860.1 [Burkholderia thailandensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009893010.1 12855 12513 - 113NO PFAM MATCH---
WP_009902840.1 13289 12911 - 125NO PFAM MATCH---
WP_011401794.1 13952 13577 - 124NO PFAM MATCH---
WP_009893006.1 14777 14423 - 117NO PFAM MATCH---
WP_019256683.1 15045 16044 + 332PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
3.40E-17
2.80E-09
WP_269241977.1 16054 20116 + 1353PF00069
PF07714
PF13191
PF13401
PF05729
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
NACHT
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
NACHT domain
1.20E-44
5.50E-25
2.70E-19
2.40E-06
9.70E-06
WP_009902858.1 20112 20475 + 120NO PFAM MATCH---
WP_009893002.1 20476 20839 + 120NO PFAM MATCH---
WP_009902860.1 20927 23198 + 756PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-90
WP_009893000.1 23281 24058 + 258PF00596Aldolase_IIClass II Aldolase and Adducin N-terminal domain1.50E-40
WP_019255297.1 24535 26839 + 767PF00563
PF00990
EAL
GGDEF
EAL domain
Diguanylate cyclase, GGDEF domain
3.90E-58
6.20E-34
WP_009902871.1 28192 26923 - 422PF01943
PF13440
PF14667
Polysacc_synt
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
2.70E-31
8.10E-08
1.30E-04
WP_009902873.1 29465 28268 - 398PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
4.00E-17
1.80E-14
1.40E-05
WP_009902874.1 31091 29498 - 530PF01050
PF00483
PF07883
PF12804
MannoseP_isomer
NTP_transferase
Cupin_2
NTP_transf_3
Mannose-6-phosphate isomerase
Nucleotidyl transferase
Cupin domain
MobA-like NTP transferase domain
2.20E-73
1.10E-51
3.30E-09
4.30E-05
WP_009892992.1 31726 31087 - 212PF13673Acetyltransf_10Acetyltransferase (GNAT) domain5.10E-05
WP_011851073.1 31692 32086 + 131INFERRED GENE---
WP_019255295.1 32104 33349 + 414PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
9.10E-26
7.60E-19
2.30E-09

Results for WP_010035543.1 [Streptomyces sp. SID5464] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_237556469.1 170034 168720 - 437PF07732
PF07731
PF00394
PF00127
Cu-oxidase_3
Cu-oxidase_2
Cu-oxidase
Copper-bind
Multicopper oxidase
Multicopper oxidase
Multicopper oxidase
Copper binding proteins, plastocyanin/azurin family
2.20E-25
2.60E-22
4.40E-07
4.10E-05
WP_010035536.1 170450 172016 + 521PF00881NitroreductaseNitroreductase family1.50E-12
WP_078602758.1 172179 172353 + 57PF19409Thiopep_preThiopeptide-type bacteriocin precursor6.30E-12
WP_078602759.1 172388 172562 + 57PF19409Thiopep_preThiopeptide-type bacteriocin precursor6.20E-12
WP_237556459.1 173484 172806 - 225NO PFAM MATCH---
WP_010035539.1 173710 174784 + 357NO PFAM MATCH---
WP_010035540.1 174780 177393 + 870PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.00E-14
WP_010035541.1 177389 179354 + 654NO PFAM MATCH---
WP_010035543.1 179340 181254 + 637PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.00E-71
WP_102515024.1 181496 182810 + 437PF00881NitroreductaseNitroreductase family1.60E-06
WP_010035547.1 182848 183784 + 311PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.20E-37
WP_010035549.1 184396 183871 - 174PF04264YceIYceI-like domain5.20E-22
WP_010035551.1 185330 184496 - 277PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
3.30E-20
2.80E-10
1.00E-04
WP_237556470.1 186301 185326 - 324PF00005
PF13304
PF13604
ABC_tran
AAA_21
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
3.50E-28
1.90E-12
6.70E-04
WP_231911162.1 186628 187876 + 415PF01494FAD_binding_3FAD binding domain2.90E-26
WP_010035556.1 188137 188812 + 224PF00457Glyco_hydro_11Glycosyl hydrolases family 111.40E-77
WP_010035557.1 188814 189522 + 235PF01522Polysacc_deac_1Polysaccharide deacetylase3.60E-36

Results for WP_010048307.1 [Streptomyces sp. SID5464] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010048289.1 34075 34519 + 147PF12802
PF01047
PF13463
PF01978
PF12840
MarR_2
MarR
HTH_27
TrmB
HTH_20
MarR family
MarR family
Winged helix DNA-binding domain
Sugar-specific transcriptional regulator TrmB
Helix-turn-helix domain
5.20E-13
1.20E-10
4.90E-10
7.80E-05
6.70E-04
WP_010048291.1 35981 34778 - 400NO PFAM MATCH---
WP_010048293.1 36070 37045 + 324PF01497Peripla_BP_2Periplasmic binding protein2.30E-19
WP_040904381.1 37128 38187 + 352PF01032FecCDFecCD transport family7.10E-67
WP_237556603.1 38258 39191 + 310PF01032FecCDFecCD transport family3.10E-67
WP_010048299.1 39211 40033 + 273PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.50E-31
7.30E-08
4.20E-05
1.50E-04
WP_010048303.1 40292 41147 + 285INFERRED GENE---
WP_010048304.1 41143 42625 + 493PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
4.80E-34
5.00E-18
WP_010048307.1 42621 44001 + 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-40
WP_010048308.1 44012 45185 + 390PF00881NitroreductaseNitroreductase family1.30E-07
WP_202458672.1 45124 46921 + 598PF00005
PF00664
PF02463
PF13191
PF09818
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC_ATPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
ATPase of the ABC class
2.30E-33
7.20E-16
9.20E-07
4.70E-06
1.50E-04
WP_010048312.1 46917 48657 + 579PF00005
PF00664
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
9.50E-26
9.20E-14
2.60E-05
5.40E-05
WP_010048314.1 49915 50159 + 81NO PFAM MATCH---
WP_005483758.1 50259 50540 + 93INFERRED GENE---
WP_040904384.1 50780 51305 + 174NO PFAM MATCH---
WP_016828477.1 51330 51563 + 77INFERRED GENE---
WP_010048323.1 52891 51886 - 334PF13354Beta-lactamase2Beta-lactamase enzyme family2.30E-17

Results for WP_062885094.1 [Burkholderia cenocepacia] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_212093904.1 42272 42038 - 77NO PFAM MATCH---
WP_006494605.1 43245 42423 - 273PF08021
PF04954
FAD_binding_9
SIP
Siderophore-interacting FAD-binding domain
Siderophore-interacting protein
8.40E-36
1.50E-35
WP_212093905.1 43988 43283 - 234PF03551PadRTranscriptional regulator PadR-like family1.80E-20
WP_146211699.1 44433 44673 + 79NO PFAM MATCH---
WP_062885092.1 44796 45798 + 333PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
1.80E-16
1.80E-07
WP_249191627.1 45788 49847 + 1352PF00069
PF07714
PF13191
PF13401
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
4.50E-41
2.50E-22
3.90E-16
9.60E-04
WP_006488524.1 49881 50226 + 114NO PFAM MATCH---
WP_023474948.1 50242 50605 + 120NO PFAM MATCH---
WP_062885094.1 50698 52939 + 746PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-88
WP_109342045.1 54098 53006 - 363PF13609Porin_4Gram-negative porin3.80E-49
WP_109342046.1 54998 54275 - 240PF13561
PF00106
PF01370
PF08659
PF13579
adh_short_C2
adh_short
Epimerase
KR
Glyco_trans_4_4
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
KR domain
Glycosyl transferase 4-like domain
2.60E-57
3.10E-42
1.90E-05
8.40E-04
9.20E-04
WP_058902471.1 56097 54975 - 373PF08240
PF00107
PF13602
PF16912
PF13823
ADH_N
ADH_zinc_N
ADH_zinc_N_2
Glu_dehyd_C
ADH_N_assoc
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Glucose dehydrogenase C-terminus
Alcohol dehydrogenase GroES-associated
2.50E-33
2.10E-29
1.60E-08
1.90E-04
6.50E-04
WP_212093907.1 57403 56098 - 434PF07690
PF01306
PF12832
MFS_1
LacY_symp
MFS_1_like
Major Facilitator Superfamily
LacY proton/sugar symporter
MFS_1 like family
9.40E-47
5.60E-06
1.20E-04
WP_205713792.1 57883 57421 - 153PF07883
PF12973
Cupin_2
Cupin_7
Cupin domain
ChrR Cupin-like domain
8.10E-07
1.90E-04
WP_006494596.1 58134 59115 + 327INFERRED GENE---
WP_212093908.1 60776 59210 - 521PF00732
PF05199
PF01266
PF00890
PF07992
GMC_oxred_N
GMC_oxred_C
DAO
FAD_binding_2
Pyr_redox_2
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
1.90E-80
1.60E-37
7.80E-13
2.20E-06
1.20E-05
WP_212093909.1 61903 60934 - 322PF12833
PF14525
PF00165
HTH_18
AraC_binding_2
HTH_AraC
Helix-turn-helix domain
AraC-binding-like domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.90E-20
7.90E-14
1.20E-08

Results for WP_058568958.1 [Haloferax marisrubri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058568950.1 65912 66623 + 236NO PFAM MATCH---
WP_058568951.1 66665 66899 + 77NO PFAM MATCH---
WP_058568952.1 67433 66920 - 170PF00293NUDIXNUDIX domain5.30E-16
WP_058568953.1 68342 67448 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
6.90E-68
6.40E-37
WP_058568954.1 69010 68440 - 189PF01988VIT1VIT family1.50E-08
WP_058568955.1 69309 69009 - 99PF02680DUF211Uncharacterized ArCR, COG18883.50E-34
WP_058568956.1 70656 69408 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.00E-152
5.00E-10
8.20E-06
WP_058568957.1 71023 71851 + 275PF19138DUF5821Family of unknown function (DUF5821)4.30E-96
WP_058568958.1 71900 73589 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-57
WP_199180569.1 74929 73810 - 372PF01889DUF63Membrane protein of unknown function DUF632.20E-36
WP_004044674.1 75517 75046 - 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.70E-08
6.20E-07
WP_058568960.1 76427 75629 - 265PF00459Inositol_PInositol monophosphatase family5.70E-48
WP_058568961.1 76518 76788 + 89NO PFAM MATCH---
WP_058568962.1 78382 77722 - 219PF03824NicOHigh-affinity nickel-transport protein6.00E-04
WP_058568963.1 78640 78451 - 62NO PFAM MATCH---
WP_058568964.1 78729 79215 + 161PF03745DUF309Domain of unknown function (DUF309)8.90E-16
WP_058568965.1 79334 80201 + 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.80E-11

Results for WP_014613464.1 [Staphylococcus pseudintermedius] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014613463.1 280 1030 + 249NO PFAM MATCH---
WP_014613464.1 1082 2126 + 347PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-23
WP_014613465.1 2136 3327 + 396PF07690MFS_1Major Facilitator Superfamily1.40E-08
WP_037542634.1 3340 4708 + 455PF00005
PF13304
PF02463
PF03205
PF13476
ABC_tran
AAA_21
SMC_N
MobB
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
Molybdopterin guanine dinucleotide synthesis protein B
AAA domain
2.40E-26
2.60E-08
3.80E-08
7.90E-06
1.90E-05
WP_014613462.1 5240 5471 + 77INFERRED GENE---
WP_065354136.1 5944 6829 + 294PF01381
PF12844
HTH_3
HTH_19
Helix-turn-helix
Helix-turn-helix domain
4.70E-09
8.80E-06

Results for WP_014614774.1 back to top

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Couldn't process WP_014614774.1 Genbank filestream. May be corrupt.

Results for WP_000192971.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000424511.1 755149 754315 - 277PF11667DUF3267Putative zincin peptidase5.70E-04
WP_000649875.1 755346 756132 + 261PF12773
PF13240
DZR
zinc_ribbon_2
Double zinc ribbon
zinc-ribbon domain
2.60E-04
2.90E-04
WP_017672808.1 756215 756376 + 53INFERRED GENE---
WP_000332390.1 756912 756480 - 143NO PFAM MATCH---
WP_001110214.1 757109 758444 + 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
1.50E-63
2.30E-20
5.80E-17
3.10E-15
3.10E-10
WP_000470984.1 758545 759037 + 163PF00583
PF13508
PF13673
PF17013
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransf_15
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Putative acetyl-transferase
6.20E-10
1.20E-06
8.10E-05
8.90E-04
WP_000996788.1 759181 759592 + 136PF13048DUF3908Protein of unknown function (DUF3908)2.30E-54
WP_001175517.1 761165 759623 - 513PF00881NitroreductaseNitroreductase family6.50E-13
WP_000192971.1 763131 761181 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-83
WP_000067629.1 765047 763127 - 639NO PFAM MATCH---
WP_000569912.1 766428 765171 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
4.20E-13
1.70E-04
WP_000197127.1 769429 766561 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.10E-55
5.20E-37
WP_000428510.1 770253 770463 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_001109905.1 770465 770843 + 125NO PFAM MATCH---
WP_001178301.1 770871 771054 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001036567.1 771188 771545 + 118NO PFAM MATCH---
WP_001195372.1 771563 771833 + 89NO PFAM MATCH---

Results for WP_005687300.1 back to top

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Couldn't process WP_005687300.1 Genbank filestream. May be corrupt.

Results for WP_000194821.1 back to top

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Couldn't process WP_000194821.1 Genbank filestream. May be corrupt.

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_050873290.1 [Yersinia massiliensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005159911.1 96870 99146 + 758INFERRED GENE---
WP_019209506.1 99804 99519 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.40E-28
5.40E-07
WP_004391091.1 101538 99864 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_019209505.1 102400 101707 - 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
3.10E-81
3.20E-07
1.30E-04
4.90E-04
WP_050081440.1 103978 102691 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.00E-149
WP_050878981.1 105194 104108 - 361PF00266Aminotran_5Aminotransferase class-V5.00E-67
WP_050286091.1 106093 105400 - 230PF04239DUF421Protein of unknown function (DUF421)3.70E-14
WP_108087905.1 107336 106280 - 351PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
5.40E-62
7.60E-26
WP_050873290.1 107485 109252 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.20E-80
1.10E-61
WP_050081435.1 109757 110615 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-73
WP_050081434.1 110667 112950 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.70E-204
1.20E-43
WP_005171041.1 113149 113890 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.50E-31
1.70E-18
4.50E-06
WP_049605352.1 115129 113980 - 382PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
2.40E-25
8.90E-08
2.40E-04
2.80E-04
WP_050081433.1 116654 115361 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
9.00E-37
5.10E-29
WP_108087906.1 118149 116805 - 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.50E-63
3.10E-22
3.00E-16
1.30E-12
8.00E-07
WP_050081432.1 118768 118156 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
4.10E-59
5.60E-05
WP_050081431.1 122671 118873 - 1265PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
8.70E-73
3.00E-43
3.20E-28
2.00E-26
5.20E-05

Results for WP_005352574.1 back to top

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Couldn't process WP_005352574.1 Genbank filestream. May be corrupt.

Results for WP_046615452.1 [Pseudomonas pudica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046615458.1 214713 215031 + 105NO PFAM MATCH---
WP_108479853.1 215039 215240 + 66PF06945DUF1289Protein of unknown function (DUF1289)1.60E-15
WP_025338811.1 215290 215932 + 213PF01810LysELysE type translocator5.90E-30
WP_085599086.1 216099 216888 + 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
5.50E-26
6.60E-05
WP_196172825.1 217929 216909 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.00E-35
1.80E-22
WP_196172823.1 219424 218080 - 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
7.90E-24
3.10E-22
WP_046615454.1 221691 219441 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
2.40E-33
7.30E-31
WP_046615453.1 222146 221690 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
3.00E-22
3.80E-08
4.70E-05
WP_046615452.1 222530 224720 + 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-73
6.80E-72
4.70E-08
WP_196172821.1 225238 224957 - 92PF02371Transposase_20Transposase IS116/IS110/IS902 family7.90E-07

Results for WP_023320066.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_048722343.1 [Bacillus cereus group sp. BfR-BA-01522] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002181772.1 209526 210263 + 245INFERRED GENE---
WP_011984035.1 210496 211990 + 497PF02652Lactate_permL-lactate permease1.30E-63
WP_011984036.1 212094 212778 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.40E-75
WP_011984037.1 213658 212824 - 277NO PFAM MATCH---
WP_011984038.1 213786 214533 + 248PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.90E-06
5.60E-06
WP_011984039.1 214707 216042 + 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
2.30E-65
4.20E-22
1.20E-19
1.70E-12
3.90E-11
WP_011984040.1 216170 216581 + 136PF13048DUF3908Protein of unknown function (DUF3908)2.70E-43
WP_011984041.1 218339 216794 - 514PF00881NitroreductaseNitroreductase family6.90E-15
WP_048722343.1 220352 218399 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-84
WP_011984043.1 222271 220345 - 641PF00899ThiFThiF family6.10E-04
WP_011984044.1 223674 222429 - 414PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
4.70E-82
1.10E-20
7.60E-13
9.70E-08
WP_011984045.1 226671 223794 - 958PF00676
PF02779
PF16870
PF16078
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2-oxoglutarate dehydrogenase N-terminus
2.60E-66
3.00E-56
1.20E-36
3.10E-04
WP_011984046.1 227638 227821 + 60PF13121DUF3976Domain of unknown function (DUF3976)3.50E-24
WP_011984047.1 228767 227882 - 294PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.20E-39
4.00E-24
WP_011984048.1 228953 229880 + 308PF00701DHDPSDihydrodipicolinate synthetase family7.10E-90
WP_011984049.1 229949 231473 + 507PF00171AldedhAldehyde dehydrogenase family4.50E-173
WP_011984050.1 231526 232999 + 490PF11794
PF03241
HpaB_N
HpaB
4-hydroxyphenylacetate 3-hydroxylase N terminal
4-hydroxyphenylacetate 3-hydroxylase C terminal
1.90E-103
1.50E-72

Results for WP_004809371.1 [Acinetobacter schindleri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004809385.1 1614795 1615809 + 337PF01435
PF18958
Peptidase_M48
DUF5700
Peptidase family M48
Putative zinc dependent peptidase (DUF5700)
1.90E-17
5.00E-04
WP_004809384.1 1615899 1616103 + 67NO PFAM MATCH---
WP_004809382.1 1616720 1616111 - 202PF01914MarCMarC family integral membrane protein1.20E-14
YP_004994476.1 1616748 1618799 + 683INFERRED GENE---
WP_004809378.1 1619054 1619660 + 201PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
1.00E-29
2.50E-11
WP_004809376.1 1619656 1621132 + 491PF00171AldedhAldehyde dehydrogenase family5.40E-175
WP_108675984.1 1621143 1622799 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.30E-96
2.20E-40
5.40E-04
WP_004809373.1 1622926 1623697 + 256NO PFAM MATCH---
WP_004809371.1 1624039 1626241 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.70E-75
6.90E-73
8.30E-09
WP_004809370.1 1626483 1627482 + 332PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domain6.70E-04
WP_004809367.1 1627469 1628264 + 264PF02585PIG-LGlcNAc-PI de-N-acetylase1.10E-24
WP_004809365.1 1628244 1628853 + 202PF05401
PF13649
PF08241
PF13489
PF08242
NodS
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Nodulation protein S (NodS)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-13
7.00E-11
1.40E-09
2.10E-08
3.30E-08
WP_004809364.1 1628849 1629572 + 240PF00535
PF13641
PF13632
PF13506
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Glycosyl transferase family 21
4.10E-11
3.60E-08
5.90E-05
6.90E-04
WP_034423874.1 1629782 1631015 + 410PF07690MFS_1Major Facilitator Superfamily2.10E-27
WP_004809362.1 1632477 1631046 - 476PF00982Glyco_transf_20Glycosyltransferase family 201.30E-95
WP_228127294.1 1633295 1632443 - 283PF02358
PF08282
PF05116
Trehalose_PPase
Hydrolase_3
S6PP
Trehalose-phosphatase
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
2.00E-26
4.10E-13
5.50E-06
WP_004809360.1 1633857 1634649 + 263PF02129Peptidase_S15X-Pro dipeptidyl-peptidase (S15 family)2.60E-41

Results for WP_068946113.1 [Photobacterium damselae subsp. damselae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_237031400.1 770913 768543 - 789PF02518
PF12729
PF00672
PF00512
PF13426
HATPase_c
4HB_MCP_1
HAMP
HisKA
PAS_9
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Four helix bundle sensory module for signal transduction
HAMP domain
His Kinase A (phospho-acceptor) domain
PAS domain
1.30E-14
6.00E-09
7.00E-06
1.90E-05
4.80E-05
WP_237031401.1 772158 770916 - 413PF13343
PF13416
PF01547
SBP_bac_6
SBP_bac_8
SBP_bac_1
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
3.20E-21
1.90E-07
5.30E-07
WP_005298125.1 772871 772370 - 166PF03887YfbUYfbU domain3.00E-70
WP_106142792.1 774978 773223 - 584PF01268FTHFSFormate--tetrahydrofolate ligase1.20E-239
WP_068946116.1 776318 775571 - 248PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.70E-31
2.40E-20
2.00E-06
WP_069530823.1 776627 778523 + 631PF01136
PF12392
Peptidase_U32
DUF3656
Peptidase family U32
Collagenase
3.90E-69
4.60E-23
WP_237031402.1 781096 778822 - 757PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.50E-200
5.10E-43
WP_085999116.1 782025 781152 - 290PF01226Form_Nir_transFormate/nitrite transporter5.50E-77
WP_068946113.1 784389 782640 - 582PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.00E-78
5.20E-66
WP_069530822.1 785406 784599 - 268PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family5.30E-21
WP_005298135.1 785868 786117 + 82PF04226Transgly_assocTransglycosylase associated protein1.10E-11
WP_136039946.1 787933 786280 - 550PF00072
PF13432
PF14559
PF07719
Response_reg
TPR_16
TPR_19
TPR_2
Response regulator receiver domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.80E-13
1.70E-06
4.60E-04
9.80E-04
WP_237031403.1 789579 790689 + 369PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
2.20E-30
2.50E-16
1.50E-06
WP_237031404.1 790688 793811 + 1040PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
2.80E-282
4.90E-21
WP_237031405.1 793817 793955 + 45NO PFAM MATCH---
WP_237031406.1 794614 794008 - 201PF13505
PF01389
OMP_b-brl
OmpA_membrane
Outer membrane protein beta-barrel domain
OmpA-like transmembrane domain
3.80E-18
2.70E-05
WP_005298143.1 794784 795093 + 102PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.20E-19

Results for WP_065992370.1 [Acinetobacter defluvii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_065992354.1 1465644 1464600 - 347PF02016
PF17676
Peptidase_S66
Peptidase_S66C
LD-carboxypeptidase N-terminal domain
LD-carboxypeptidase C-terminal domain
8.40E-26
2.40E-23
WP_065992355.1 1466272 1465834 - 145PF09917DUF2147Uncharacterized protein conserved in bacteria (DUF2147)4.50E-25
WP_065992357.1 1466677 1467595 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.00E-36
1.10E-23
WP_065992359.1 1467859 1468849 + 329PF12833
PF14525
PF00165
HTH_18
AraC_binding_2
HTH_AraC
Helix-turn-helix domain
AraC-binding-like domain
Bacterial regulatory helix-turn-helix proteins, AraC family
6.50E-21
2.10E-20
1.70E-12
WP_065992361.1 1470257 1468910 - 448PF07690
PF00083
PF06779
PF05977
MFS_1
Sugar_tr
MFS_4
MFS_3
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
Transmembrane secretion effector
1.20E-52
7.20E-27
5.10E-09
6.50E-04
WP_065992363.1 1471546 1470514 - 343PF00970
PF00175
PF00111
PF08030
FAD_binding_6
NAD_binding_1
Fer2
NAD_binding_6
Oxidoreductase FAD-binding domain
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Ferric reductase NAD binding domain
9.80E-25
7.60E-21
1.50E-15
4.00E-04
WP_065992365.1 1472049 1471557 - 163PF00866
PF13577
Ring_hydroxyl_B
SnoaL_4
Ring hydroxylating beta subunit
SnoaL-like domain
3.80E-44
1.90E-04
WP_065992368.1 1473464 1472051 - 470PF00355
PF00848
Rieske
Ring_hydroxyl_A
Rieske [2Fe-2S] domain
Ring hydroxylating alpha subunit (catalytic domain)
3.30E-23
2.10E-10
WP_065992370.1 1473789 1475991 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.30E-74
1.10E-73
3.60E-08
WP_065992372.1 1476605 1476038 - 188PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
1.10E-42
3.70E-11
WP_171488549.1 1477483 1476766 - 238PF13417
PF14497
PF00043
GST_N_3
GST_C_3
GST_C
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
2.80E-09
2.30E-05
7.50E-05
WP_089024768.1 1477949 1477748 - 66PF00403HMAHeavy-metal-associated domain2.30E-12
WP_065992449.1 1478765 1478324 - 146NO PFAM MATCH---
WP_065992380.1 1479108 1478769 - 112NO PFAM MATCH---
WP_171488550.1 1479475 1479307 - 55NO PFAM MATCH---
WP_065992388.1 1480571 1481027 + 151PF01220DHquinase_IIDehydroquinase class II3.90E-61
WP_065992389.1 1481045 1481468 + 140PF00364
PF13533
Biotin_lipoyl
Biotin_lipoyl_2
Biotin-requiring enzyme
Biotin-lipoyl like
1.10E-21
1.20E-06

Results for WP_008409979.1 back to top

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Couldn't process WP_008409979.1 Genbank filestream. May be corrupt.

Results for WP_008410237.1 [Streptomyces albidoflavus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_267767078.1 4419900 4422132 + 743NO PFAM MATCH---
WP_031178281.1 4422121 4424074 + 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-81
WP_010643007.1 4424126 4425732 + 535INFERRED GENE---
WP_252933053.1 4425758 4428494 + 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.90E-45
WP_008409260.1 4428490 4429558 + 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-96
WP_031178278.1 4429554 4430682 + 375PF02163Peptidase_M50Peptidase family M505.00E-04
WP_003950322.1 4430733 4431681 + 315PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_003950323.1 4431725 4432481 + 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.00E-29
1.40E-21
9.30E-06
WP_008410237.1 4432581 4434591 + 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-76
WP_026048345.1 4434851 4434674 - 58NO PFAM MATCH---
WP_018895323.1 4435051 4436335 + 428INFERRED GENE---
WP_008410241.1 4436331 4436592 + 86NO PFAM MATCH---
WP_008410243.1 4437195 4436580 - 204PF13977
PF00440
PF17940
PF00356
TetR_C_6
TetR_N
TetR_C_31
LacI
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, lacI family
1.30E-23
7.40E-10
4.20E-05
5.30E-04
WP_008410245.1 4437364 4438783 + 472PF01425AmidaseAmidase3.70E-95
WP_234364554.1 4439789 4438784 - 334PF00196GerEBacterial regulatory proteins, luxR family1.60E-05
WP_003950331.1 4440219 4443753 + 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
2.20E-31
4.00E-25
5.70E-23
4.80E-17
2.90E-16
WP_015507246.1 4444119 4443777 - 113NO PFAM MATCH---

Results for WP_064335887.1 [Aeromonas veronii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_082182228.1 30931 31909 + 325PF12833
PF06445
PF00165
PF14526
HTH_18
GyrI-like
HTH_AraC
Cass2
Helix-turn-helix domain
GyrI-like small molecule binding domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Integron-associated effector binding protein
9.10E-20
3.40E-15
2.50E-14
1.70E-12
WP_064335880.1 32164 34309 + 714PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
8.30E-56
2.50E-19
WP_064335881.1 34347 35154 + 268PF11575FhuF_CFhuF 2Fe-2S C-terminal domain5.40E-06
WP_103422421.1 36119 35198 - 306PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.80E-38
1.20E-16
WP_064335883.1 36395 38660 + 754PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
7.00E-157
6.90E-127
WP_064335884.1 38837 39587 + 249PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 36.00E-21
WP_064335885.1 40487 39623 - 287PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
7.60E-29
3.60E-16
WP_064335886.1 40653 42087 + 477PF00232
PF00331
Glyco_hydro_1
Glyco_hydro_10
Glycosyl hydrolase family 1
Glycosyl hydrolase family 10
1.50E-172
9.70E-04
WP_064335887.1 42280 44041 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.60E-77
5.30E-65
WP_005333620.1 44422 45271 + 282PF01226Form_Nir_transFormate/nitrite transporter1.30E-74
WP_005333618.1 45317 47600 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.80E-202
4.60E-43
WP_265783204.1 48004 47670 - 110NO PFAM MATCH---

Results for WP_005051051.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_027223256.1 back to top

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Couldn't process WP_027223256.1 Genbank filestream. May be corrupt.

Results for WP_012421219.1 back to top

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Couldn't process WP_012421219.1 Genbank filestream. May be corrupt.

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000197742.1 back to top

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Couldn't process WP_000197742.1 Genbank filestream. May be corrupt.

Results for WP_000192966.1 [Bacillus cereus group sp. BfR-BA-01346] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001195263.1 5393 5123 - 89NO PFAM MATCH---
WP_001036569.1 5771 5411 - 119NO PFAM MATCH---
WP_001178301.1 6088 5905 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109900.1 6494 6116 - 125NO PFAM MATCH---
WP_000428510.1 6706 6496 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_000197172.1 7531 10399 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.20E-55
5.00E-37
WP_000569898.1 10532 11792 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_000067621.1 11916 13836 + 639NO PFAM MATCH---
WP_000192966.1 13832 15782 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.10E-82
WP_001175516.1 15798 17340 + 513PF00881NitroreductaseNitroreductase family8.00E-13
WP_000025743.1 17432 18023 + 196PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.20E-17
4.40E-17
6.10E-16
2.80E-11
3.30E-11
WP_000996787.1 18466 18055 - 136PF13048DUF3908Protein of unknown function (DUF3908)4.10E-54
WP_000470989.1 19102 18610 - 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
9.90E-10
2.00E-06
4.80E-04
WP_001110216.1 20538 19203 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.50E-63
5.80E-20
8.50E-17
3.30E-15
4.00E-10
WP_000332390.1 20735 21167 + 143NO PFAM MATCH---
WP_017672808.1 21271 21432 + 53INFERRED GENE---
WP_000650072.1 22301 21515 - 261PF20214
PF13240
PF12773
PF13248
DUF6574
zinc_ribbon_2
DZR
zf-ribbon_3
Family of unknown function (DUF6574)
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
8.00E-07
4.10E-06
1.00E-05
6.20E-04

Results for WP_002126027.1 [Bacillus sp. MYb56] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002193269.1 101996 101837 - 52PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductase2.80E-06
WP_002188809.1 102611 102248 - 120NO PFAM MATCH---
WP_002011459.1 102930 102747 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_002117153.1 103336 102958 - 125NO PFAM MATCH---
WP_002188807.1 103548 103332 - 71PF01381
PF12844
PF13560
PF04545
PF13413
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_25
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
Helix-turn-helix domain
5.00E-18
3.60E-10
1.90E-07
3.80E-05
9.40E-05
WP_002011454.1 104443 107311 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
4.20E-64
4.60E-55
1.70E-36
WP_002186382.1 107440 108697 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.20E-80
6.30E-20
9.50E-13
9.30E-05
WP_002186383.1 108822 110742 + 639NO PFAM MATCH---
WP_002126027.1 110738 112688 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-85
WP_002188803.1 112710 114273 + 520PF00881NitroreductaseNitroreductase family4.40E-14
WP_002140884.1 114365 114956 + 196PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
8.50E-19
3.70E-18
1.60E-17
9.20E-14
2.60E-12
WP_002126019.1 115399 114988 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.80E-48
WP_002126016.1 116893 115558 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.80E-61
6.50E-20
2.50E-16
5.60E-15
9.30E-10
WP_002188801.1 117092 117515 + 140NO PFAM MATCH---
WP_002186387.1 118794 117558 - 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
1.50E-22
9.30E-08
6.30E-04
WP_002126012.1 119596 118813 - 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.50E-05
5.10E-05
WP_002193270.1 119796 120630 + 277PF11667DUF3267Putative zincin peptidase7.10E-04

Results for WP_005659621.1 [Haemophilus influenzae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005659602.1 78628 77515 - 370PF10609
PF01656
PF13614
PF09140
PF00142
ParA
CbiA
AAA_31
MipZ
Fer4_NifH
NUBPL iron-transfer P-loop NTPase
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
ATPase MipZ
4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
8.20E-102
9.70E-12
6.80E-10
2.90E-08
9.10E-08
WP_005659604.1 78778 80827 + 682PF09334
PF01588
PF00133
PF01406
PF19303
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA synthetases class I (M)
Putative tRNA binding domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (C) catalytic domain
Anticodon binding domain of methionyl tRNA ligase
1.00E-166
6.40E-24
8.00E-15
2.00E-12
1.90E-10
WP_005659606.1 80939 81800 + 286PF03848
PF09313
PF13649
PF13489
PF13847
TehB
DUF1971
Methyltransf_25
Methyltransf_23
Methyltransf_31
Tellurite resistance protein TehB
Domain of unknown function (DUF1971)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
7.00E-115
2.40E-32
1.20E-11
1.50E-09
2.60E-09
WP_005659609.1 82545 81843 - 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.60E-16
4.20E-12
3.70E-07
WP_005659611.1 83403 82596 - 268PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
5.10E-10
7.50E-08
1.10E-06
1.50E-06
6.80E-06
WP_005646662.1 83399 84164 + 255INFERRED GENE---
WP_005576218.1 84184 84298 + 38INFERRED GENE---
WP_032824949.1 84374 84761 + 128NO PFAM MATCH---
WP_005659621.1 84897 86661 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.70E-81
1.20E-61
WP_005659625.1 87230 89879 + 882PF00521
PF03989
DNA_topoisoIV
DNA_gyraseA_C
DNA gyrase/topoisomerase IV, subunit A
DNA gyrase C-terminal domain, beta-propeller
3.40E-149
6.50E-79
WP_005659627.1 91010 89933 - 358PF00561Abhydrolase_1alpha/beta hydrolase fold1.60E-53
WP_046067845.1 91167 91848 + 226PF02698DUF218DUF218 domain2.90E-14
WP_005657565.1 93431 92126 - 434PF08245
PF02875
Mur_ligase_M
Mur_ligase_C
Mur ligase middle domain
Mur ligase family, glutamate ligase domain
1.10E-12
3.00E-04
WP_005657567.1 94323 93432 - 296PF01039
PF17848
Carboxyl_trans
zf-ACC
Carboxyl transferase domain
Acetyl-coA carboxylase zinc finger domain
2.30E-15
5.00E-12
WP_116967810.1 94516 95908 + 463PF00595
PF13365
PF13180
PF02163
PF17820
PDZ
Trypsin_2
PDZ_2
Peptidase_M50
PDZ_6
PDZ domain
Trypsin-like peptidase domain
PDZ domain
Peptidase family M50
PDZ domain
2.30E-33
1.50E-32
1.90E-23
1.10E-22
2.50E-22
WP_005659631.1 99401 95960 - 1146PF03461
PF02559
PF17757
PF00270
PF00271
TRCF
CarD_CdnL_TRCF
UvrB_inter
DEAD
Helicase_C
TRCF domain
CarD-like/TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
2.80E-29
1.40E-25
2.20E-24
2.00E-20
2.70E-19
WP_005657572.1 99676 99502 - 57PF17320DUF5363Family of unknown function (DUF5363)2.50E-23

Results for WP_005692282.1 [Haemophilus influenzae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005652999.1 140077 140251 + 57PF17320DUF5363Family of unknown function (DUF5363)1.20E-23
WP_005692307.1 140352 143793 + 1146PF03461
PF02559
PF17757
PF00270
PF00271
TRCF
CarD_CdnL_TRCF
UvrB_inter
DEAD
Helicase_C
TRCF domain
CarD-like/TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
9.60E-30
4.60E-25
1.20E-24
1.80E-20
3.00E-19
WP_005692306.1 145237 143845 - 463PF00595
PF13365
PF13180
PF17820
PF02163
PDZ
Trypsin_2
PDZ_2
PDZ_6
Peptidase_M50
PDZ domain
Trypsin-like peptidase domain
PDZ domain
PDZ domain
Peptidase family M50
1.20E-33
9.30E-32
1.00E-23
2.40E-22
2.50E-22
WP_005653009.1 145430 146321 + 296PF01039
PF17848
Carboxyl_trans
zf-ACC
Carboxyl transferase domain
Acetyl-coA carboxylase zinc finger domain
2.40E-15
7.00E-12
WP_032826884.1 146322 147627 + 434PF08245
PF02875
Mur_ligase_M
Mur_ligase_C
Mur ligase middle domain
Mur ligase family, glutamate ligase domain
3.20E-12
9.40E-04
WP_032826883.1 148595 147914 - 226PF02698DUF218DUF218 domain1.50E-14
WP_005692289.1 148752 149829 + 358PF00561Abhydrolase_1alpha/beta hydrolase fold4.00E-53
WP_005692287.1 152537 149894 - 880PF00521
PF03989
DNA_topoisoIV
DNA_gyraseA_C
DNA gyrase/topoisomerase IV, subunit A
DNA gyrase C-terminal domain, beta-propeller
3.10E-149
3.40E-78
WP_005692282.1 154879 153115 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.80E-81
8.60E-62
WP_005653025.1 155492 155015 - 158NO PFAM MATCH---
WP_005692281.1 155726 156533 + 268PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.10E-10
8.50E-08
1.20E-07
3.60E-06
5.20E-06
WP_005692278.1 156584 157286 + 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.70E-16
3.10E-12
4.80E-07
WP_005692276.1 158190 157329 - 286PF03848
PF09313
PF13649
PF13489
PF08241
TehB
DUF1971
Methyltransf_25
Methyltransf_23
Methyltransf_11
Tellurite resistance protein TehB
Domain of unknown function (DUF1971)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.50E-114
2.70E-31
1.70E-11
2.40E-09
3.90E-09
WP_005692274.1 160349 158300 - 682PF09334
PF01588
PF00133
PF01406
PF19303
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA synthetases class I (M)
Putative tRNA binding domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (C) catalytic domain
Anticodon binding domain of methionyl tRNA ligase
1.20E-166
4.50E-24
9.70E-15
2.20E-12
1.60E-09
WP_032826882.1 160499 161612 + 370PF10609
PF01656
PF13614
PF09140
PF00142
ParA
CbiA
AAA_31
MipZ
Fer4_NifH
NUBPL iron-transfer P-loop NTPase
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
ATPase MipZ
4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
6.90E-102
9.60E-12
2.70E-10
3.50E-08
1.20E-07
WP_005694521.1 161660 162322 + 220INFERRED GENE---
WP_005653037.1 162435 163110 + 224PF02348CTP_transf_3Cytidylyltransferase1.40E-22

Results for WP_012125216.1 back to top

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Couldn't process WP_012125216.1 Genbank filestream. May be corrupt.

Results for WP_072446376.1 [Pseudomonas carnis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_060763729.1 69765 68760 - 334NO PFAM MATCH---
WP_138763863.1 70598 69899 - 232PF18735HEPN_RiboL-PSPRiboL-PSP-HEPN3.10E-04
WP_196492161.1 72706 70858 - 615PF13175
PF13304
PF20469
PF13555
PF02463
AAA_15
AAA_21
OLD-like_TOPRIM
AAA_29
SMC_N
AAA ATPase domain
AAA domain, putative AbiEii toxin, Type IV TA system
Overcoming lysogenization defect protein-like, TOPRIM domain
P-loop containing region of AAA domain
RecF/RecN/SMC N terminal domain
5.10E-29
1.30E-15
5.50E-14
2.70E-06
1.10E-05
WP_127881925.1 73981 73087 - 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.20E-39
4.00E-17
WP_138764018.1 74075 75134 + 352PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
1.30E-22
4.60E-07
5.80E-07
WP_060763725.1 75192 75675 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.70E-46
WP_060764260.1 76166 77543 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
4.90E-64
4.60E-15
WP_019817159.1 77539 78706 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme1.70E-149
WP_072446376.1 81028 78829 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
9.00E-75
2.80E-71
3.70E-08
WP_060764259.1 81192 81771 + 192PF00857IsochorismataseIsochorismatase family1.50E-36
WP_020302290.1 81880 82330 + 150INFERRED GENE---
WP_060764258.1 83120 82322 - 265PF01909NTP_transf_2Nucleotidyltransferase domain8.40E-04
WP_034127588.1 83596 83116 - 159PF13671
PF13238
PF01712
AAA_33
AAA_18
dNK
AAA domain
AAA domain
Deoxynucleoside kinase
9.80E-28
5.40E-06
1.00E-04
WP_060764257.1 83819 84143 + 107NO PFAM MATCH---
WP_060764256.1 84231 84657 + 141PF09990DUF2231Predicted membrane protein (DUF2231)9.20E-09
WP_106118351.1 84653 85946 + 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.30E-11
2.50E-05
WP_060764255.1 86885 85976 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.90E-25
1.40E-19

Results for WP_036815789.1 [Photobacterium sanctipauli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_036815800.1 6372 5694 - 225PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.40E-18
WP_036815799.1 7116 6375 - 246PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.00E-20
WP_036815798.1 8003 7226 - 258PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.40E-59
1.20E-09
WP_036815796.1 8815 8044 - 256PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
3.30E-32
4.70E-12
1.30E-06
1.90E-04
WP_051901760.1 9117 10815 + 565PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle1.20E-55
WP_036815795.1 11243 10937 - 101PF12840
PF12802
PF01022
PF01978
PF03428
HTH_20
MarR_2
HTH_5
TrmB
RP-C
Helix-turn-helix domain
MarR family
Bacterial regulatory protein, arsR family
Sugar-specific transcriptional regulator TrmB
Replication protein C N-terminal domain
7.80E-14
1.70E-06
9.90E-05
3.90E-04
5.80E-04
WP_036815793.1 12885 11400 - 494PF03606DcuCC4-dicarboxylate anaerobic carrier2.80E-121
WP_036815790.1 14237 12881 - 451PF01546Peptidase_M20Peptidase family M20/M25/M401.90E-35
WP_036815789.1 14573 16322 + 582PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-81
5.90E-65
WP_036818808.1 16830 18345 + 504PF11840DUF3360Protein of unknown function (DUF3360)3.30E-256
WP_107272483.1 18547 20824 + 758PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-202
2.30E-43
WP_107272484.1 21109 21853 + 247PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4.00E-31
8.90E-21
1.50E-06
WP_036826202.1 23149 22240 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.90E-41
4.20E-21
WP_036825239.1 23710 24250 + 179PF00571
PF05839
CBS
Apc13p
CBS domain
Apc13p protein
6.70E-17
6.80E-04
WP_107272485.1 24364 25897 + 510NO PFAM MATCH---
WP_036827927.1 26149 27433 + 427PF07690MFS_1Major Facilitator Superfamily2.80E-36
WP_036826534.1 27781 29230 + 482PF01226
PF00571
Form_Nir_trans
CBS
Formate/nitrite transporter
CBS domain
4.10E-69
1.20E-12

Results for WP_065908062.1 [Pseudomonas aylmerensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_065908075.1 174330 174723 + 130PF07366
PF12680
SnoaL
SnoaL_2
SnoaL-like polyketide cyclase
SnoaL-like domain
5.20E-38
1.00E-15
WP_065908073.1 174756 175236 + 159PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase7.70E-47
WP_065908072.1 175347 176733 + 461NO PFAM MATCH---
WP_065908071.1 177040 177904 + 287PF00701DHDPSDihydrodipicolinate synthetase family9.90E-53
WP_065908070.1 178967 178271 - 231PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
1.00E-18
1.10E-15
WP_065908069.1 180766 178969 - 598PF01425AmidaseAmidase6.80E-87
WP_065908066.1 181009 182386 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
4.30E-64
2.00E-15
WP_065908064.1 182382 183549 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme2.40E-148
WP_065908062.1 185818 183619 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.20E-74
6.50E-71
3.30E-08
WP_065908060.1 185981 187547 + 521PF00015
PF08447
PF00989
PF13426
MCPsignal
PAS_3
PAS
PAS_9
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS fold
PAS domain
5.00E-49
6.50E-12
4.90E-09
1.90E-08
WP_065908058.1 188011 188632 + 206PF01810LysELysE type translocator7.50E-31

Results for WP_005298132.1 [Photobacterium damselae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_154139409.1 17607 16365 - 413PF13343
PF13531
PF13416
PF01547
SBP_bac_6
SBP_bac_11
SBP_bac_8
SBP_bac_1
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
4.10E-21
3.90E-08
2.30E-07
4.70E-07
WP_239983980.1 18320 17819 - 166PF03887YfbUYfbU domain1.40E-70
WP_106142792.1 20427 18672 - 584PF01268FTHFSFormate--tetrahydrofolate ligase1.20E-239
WP_068946116.1 21767 21020 - 248PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.70E-31
2.40E-20
2.00E-06
WP_239983981.1 22076 23972 + 631PF01136
PF12392
Peptidase_U32
DUF3656
Peptidase family U32
Collagenase
1.10E-68
4.60E-23
WP_239983982.1 26610 24336 - 757PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.80E-201
5.20E-43
WP_069530841.1 27509 26669 - 279PF01226Form_Nir_transFormate/nitrite transporter7.00E-77
WP_239983983.1 27998 28172 + 57NO PFAM MATCH---
WP_005298132.1 29981 28232 - 582PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.80E-78
5.20E-66
WP_239983984.1 30998 30191 - 268PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family1.00E-20
WP_044174852.1 31460 31709 + 82PF04226Transgly_assocTransglycosylase associated protein2.40E-11
WP_239983985.1 33524 31871 - 550PF00072
PF13432
PF14559
Response_reg
TPR_16
TPR_19
Response regulator receiver domain
Tetratricopeptide repeat
Tetratricopeptide repeat
2.90E-13
1.50E-05
4.20E-04
WP_239983986.1 34840 35950 + 369PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
3.00E-30
2.50E-16
1.50E-06
WP_239983987.1 35949 39072 + 1040PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
3.00E-284
6.00E-18
WP_239983988.1 39923 39317 - 201PF13505
PF01389
OMP_b-brl
OmpA_membrane
Outer membrane protein beta-barrel domain
OmpA-like transmembrane domain
4.10E-18
1.90E-05
WP_005298143.1 40093 40402 + 102PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.20E-19
WP_239983989.1 40422 41229 + 268PF00359PTS_EIIA_2Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 22.50E-17

Results for WP_057068648.1 [Acinetobacter pittii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_130118660.1 2706363 2707662 + 432PF07690
PF06779
PF12832
MFS_1
MFS_4
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
9.10E-50
7.30E-07
3.40E-05
WP_002163154.1 2707711 2708611 + 299PF05681FumeraseFumarate hydratase (Fumerase)3.50E-74
WP_057076746.1 2708607 2709216 + 202PF05683Fumerase_CFumarase C-terminus7.40E-41
WP_182917454.1 2710272 2709258 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.10E-38
1.10E-14
1.70E-04
WP_182917455.1 2710407 2711895 + 495PF00743
PF13738
PF13450
PF13434
PF07992
FMO-like
Pyr_redox_3
NAD_binding_8
Lys_Orn_oxgnase
Pyr_redox_2
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Pyridine nucleotide-disulphide oxidoreductase
4.70E-19
3.00E-15
2.60E-11
1.80E-09
2.00E-09
WP_182917456.1 2711939 2712794 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
5.80E-51
1.60E-36
1.70E-11
WP_182917457.1 2712864 2713758 + 297PF07859
PF10340
PF20434
PF00326
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
8.50E-54
3.60E-11
5.10E-10
2.20E-06
WP_182917458.1 2713785 2715456 + 556PF05199
PF00732
PF01266
PF13450
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
1.70E-17
1.80E-09
2.30E-05
2.40E-05
WP_057068648.1 2717720 2715521 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.60E-75
5.10E-73
1.80E-08
WP_182917459.1 2719252 2717971 - 426PF03573OprDouter membrane porin, OprD family9.20E-106
WP_182917460.1 2720630 2719283 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
4.70E-48
1.40E-23
1.70E-09
WP_182917461.1 2721003 2722689 + 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
8.00E-77
3.60E-06
3.50E-05
WP_182918101.1 2722714 2723668 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.00E-67
WP_182917462.1 2723680 2724868 + 395PF03573OprDouter membrane porin, OprD family5.10E-34
WP_182917463.1 2725103 2726180 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
5.70E-54
9.40E-19
1.20E-05
WP_068551138.1 2726192 2727137 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
1.50E-12
5.30E-06
WP_005802836.1 2727873 2727180 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
1.00E-10

Results for WP_060839508.1 [Pseudomonas protegens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_108543980.1 1394046 1394934 + 295PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.00E-25
6.50E-18
WP_108543982.1 1395145 1397857 + 903PF13087
PF13086
PF10881
PF13604
PF13245
AAA_12
AAA_11
DUF2726
AAA_30
AAA_19
AAA domain
AAA domain
Protein of unknown function (DUF2726)
AAA domain
AAA domain
2.30E-20
4.00E-17
1.80E-12
2.00E-10
3.50E-09
WP_181321560.1 1398567 1397979 - 195PF00440TetR_NBacterial regulatory proteins, tetR family3.80E-15
WP_108543986.1 1398716 1399817 + 366PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family5.10E-84
WP_060839504.1 1399871 1400660 + 262PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
9.00E-43
2.30E-29
3.60E-10
WP_060839505.1 1400735 1401605 + 289PF00561
PF12146
PF12697
PF08386
PF03959
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
Abhydrolase_4
FSH1
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
TAP-like protein
Serine hydrolase (FSH1)
4.20E-20
2.80E-15
2.70E-14
6.90E-07
1.50E-05
WP_108543988.1 1401671 1402670 + 332PF13602
PF00107
PF08240
PF01262
PF08241
ADH_zinc_N_2
ADH_zinc_N
ADH_N
AlaDh_PNT_C
Methyltransf_11
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
Alanine dehydrogenase/PNT, C-terminal domain
Methyltransferase domain
4.00E-36
1.80E-17
1.80E-11
1.60E-04
8.20E-04
WP_108543990.1 1403302 1402900 - 133NO PFAM MATCH---
WP_060839508.1 1403479 1405699 + 739PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.40E-74
8.90E-73
6.50E-08
WP_060839509.1 1406194 1405828 - 121NO PFAM MATCH---
WP_108543992.1 1407845 1406270 - 524PF00990
PF02743
PF17203
GGDEF
dCache_1
sCache_3_2
Diguanylate cyclase, GGDEF domain
Cache domain
Single cache domain 3
2.40E-40
4.70E-20
4.10E-06
WP_060843737.1 1408178 1409021 + 280PF05076SUFUSuppressor of fused protein (SUFU)1.50E-05
WP_258230288.1 1409023 1409488 + 154NO PFAM MATCH---
WP_108543994.1 1409634 1411347 + 570PF01425AmidaseAmidase1.30E-56
WP_108543996.1 1412042 1411493 - 182NO PFAM MATCH---
WP_060839514.1 1412212 1412710 + 165NO PFAM MATCH---
WP_108543998.1 1414928 1412801 - 708PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.10E-29
1.10E-08

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_075193838.1 [Cronobacter muytjensii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_267239572.1 156031 153796 - 744PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
1.30E-51
9.40E-19
1.00E-12
3.40E-04
WP_004387353.1 156543 156258 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_004387354.1 158331 156657 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.80E-99
3.40E-12
3.30E-07
WP_038863812.1 159129 158442 - 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.20E-85
1.20E-07
8.80E-05
3.60E-04
6.40E-04
WP_075193840.1 160071 159303 - 255PF01435Peptidase_M48Peptidase family M481.30E-28
WP_075193839.1 161502 160215 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.60E-150
WP_038863817.1 162656 161570 - 361PF00266Aminotran_5Aminotransferase class-V1.60E-69
WP_038863818.1 163511 162818 - 230PF04239DUF421Protein of unknown function (DUF421)2.20E-15
WP_075193838.1 163652 165416 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-83
1.70E-67
WP_228547667.1 165776 166676 + 299PF01226Form_Nir_transFormate/nitrite transporter6.20E-75
WP_075193836.1 166727 169010 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.00E-209
5.30E-44
WP_007730248.1 169205 169946 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.00E-33
8.20E-19
3.00E-06
WP_075193835.1 171144 169995 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
7.80E-26
1.00E-08
2.40E-06
9.40E-05
WP_075193834.1 172732 171439 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
9.30E-37
1.60E-32
WP_202624678.1 174116 172829 - 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
9.70E-66
2.00E-23
7.20E-17
7.40E-14
9.10E-07
WP_038863831.1 174796 174181 - 204PF03548LolAOuter membrane lipoprotein carrier protein LolA1.00E-58
WP_151030391.1 179162 174983 - 1392PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
3.80E-74
6.50E-42
3.10E-28
5.00E-28
6.30E-05

Results for WP_075198779.1 [Cronobacter turicensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_165689147.1 136498 134239 - 752PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
1.60E-49
5.20E-18
2.50E-11
7.00E-04
WP_004387353.1 136987 136702 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_075198783.1 138775 137101 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.30E-99
3.20E-12
1.40E-07
WP_075198782.1 139578 138891 - 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.90E-85
9.80E-08
8.10E-05
2.10E-04
6.50E-04
WP_007768798.1 140520 139752 - 255PF01435Peptidase_M48Peptidase family M486.90E-29
WP_075198781.1 141950 140663 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.20E-150
WP_075198780.1 143104 142018 - 361PF00266Aminotran_5Aminotransferase class-V5.40E-70
WP_041924142.1 143959 143266 - 230PF04239DUF421Protein of unknown function (DUF421)3.80E-16
WP_075198779.1 144100 145864 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.00E-84
6.40E-69
WP_041923388.1 146268 147126 + 285PF01226Form_Nir_transFormate/nitrite transporter4.50E-75
WP_007768779.1 147177 149460 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.20E-207
5.20E-44
WP_007768776.1 149655 150396 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.00E-32
8.10E-19
2.80E-06
WP_007768774.1 151579 150430 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.40E-25
6.90E-10
1.00E-05
5.70E-04
WP_007768767.1 153169 151876 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.70E-37
1.60E-33
WP_075198777.1 154610 153266 - 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
3.30E-65
2.00E-23
9.20E-17
6.70E-14
1.00E-06
WP_007768761.1 155237 154622 - 204PF03548LolAOuter membrane lipoprotein carrier protein LolA1.10E-58
WP_075198776.1 159560 155426 - 1377PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.30E-74
4.20E-42
3.20E-28
5.90E-28
6.10E-05

Results for WP_004888074.1 back to top

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Couldn't process WP_004888074.1 Genbank filestream. May be corrupt.

Results for WP_019426037.1 [Limnohabitans sp. Rim28] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019426029.1 14180 14948 + 255PF00005
PF12399
ABC_tran
BCA_ABC_TP_C
ABC transporter
Branched-chain amino acid ATP-binding cassette transporter
2.70E-29
6.50E-09
WP_019426030.1 14949 15663 + 237PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
8.80E-32
1.20E-04
WP_019426031.1 16440 15669 - 256PF01614
PF09339
IclR
HTH_IclR
Bacterial transcriptional regulator
IclR helix-turn-helix domain
1.20E-26
1.10E-12
WP_019426032.1 16623 17817 + 397PF01494FAD_binding_3FAD binding domain6.00E-91
WP_026039366.1 17916 18786 + 289PF02515CoA_transf_3CoA-transferase family III4.10E-47
WP_019426034.1 18933 21054 + 706PF20091Abhydrolase_10Alpha/beta hydrolase domain1.40E-52
WP_019426035.1 21124 21661 + 178PF06210DUF1003Protein of unknown function (DUF1003)6.50E-36
WP_019426036.1 21816 22368 + 183NO PFAM MATCH---
WP_019426037.1 24649 22438 - 736PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.20E-72
1.40E-71
4.00E-09
WP_019426038.1 24887 25169 + 93PF04365BrnT_toxinRibonuclease toxin, BrnT, of type II toxin-antitoxin system1.60E-25
WP_238147459.1 25158 25479 + 106PF13560
PF01381
PF15731
PF12844
HTH_31
HTH_3
MqsA_antitoxin
HTH_19
Helix-turn-helix domain
Helix-turn-helix
Antitoxin component of bacterial toxin-antitoxin system, MqsA
Helix-turn-helix domain
2.10E-09
7.00E-09
1.60E-06
1.50E-04
WP_040505824.1 29781 25674 - 1368PF11898
PF04408
PF07717
PF00271
PF00270
DUF3418
HA2
OB_NTP_bind
Helicase_C
DEAD
Domain of unknown function (DUF3418)
Helicase associated domain (HA2)
Oligonucleotide/oligosaccharide-binding (OB)-fold
Helicase conserved C-terminal domain
DEAD/DEAH box helicase
2.00E-208
2.50E-17
3.20E-13
8.70E-12
4.50E-07
WP_019426041.1 29853 30120 + 88PF19891
PF01402
DUF6364
RHH_1
Family of unknown function (DUF6364)
Ribbon-helix-helix protein, copG family
6.90E-06
2.10E-04
WP_019426042.1 30116 30554 + 145PF01850PINPIN domain1.10E-08
WP_019426043.1 30566 31913 + 448PF00696
PF00583
PF13508
AA_kinase
Acetyltransf_1
Acetyltransf_7
Amino acid kinase family
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
1.40E-23
7.40E-09
1.70E-05
WP_026039370.1 32414 31916 - 165PF02600DsbBDisulfide bond formation protein DsbB2.40E-41
WP_019426045.1 33276 32499 - 258PF00175
PF00970
PF08030
NAD_binding_1
FAD_binding_6
NAD_binding_6
Oxidoreductase NAD-binding domain
Oxidoreductase FAD-binding domain
Ferric reductase NAD binding domain
9.40E-11
2.80E-07
2.10E-04

Results for WP_030353140.1 [Streptomyces scopuliridis RB72] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_030353147.1 5117 6050 + 310PF00005
PF13304
PF13401
ABC_tran
AAA_21
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
7.90E-28
2.70E-14
2.20E-04
WP_030353146.1 6046 6844 + 265PF12730ABC2_membrane_4ABC-2 family transporter protein1.70E-05
WP_030353145.1 7251 7005 - 81PF03621MbtHMbtH-like protein3.00E-30
WP_030353144.1 8269 7459 - 269PF12697
PF00561
PF12146
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
6.60E-20
3.20E-14
8.00E-09
WP_030353143.1 9727 8299 - 475PF00171AldedhAldehyde dehydrogenase family8.30E-29
WP_030353142.1 10471 10069 - 133PF00313
PF08206
CSD
OB_RNB
'Cold-shock' DNA-binding domain
Ribonuclease B OB domain
2.30E-15
2.50E-04
WP_051746090.1 10805 11759 + 317PF12840
PF01022
PF12802
PF13412
PF13545
HTH_20
HTH_5
MarR_2
HTH_24
HTH_Crp_2
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
6.10E-09
2.60E-06
1.50E-05
1.60E-04
2.20E-04
WP_165840677.1 11957 12134 + 58NO PFAM MATCH---
WP_030353140.1 12130 14482 + 783PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.10E-96
WP_051746089.1 14626 15868 + 413PF07730HisKA_3Histidine kinase2.20E-14
WP_030353138.1 15912 16524 + 203PF00072
PF00196
PF08281
PF09339
PF08448
Response_reg
GerE
Sigma70_r4_2
HTH_IclR
PAS_4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
IclR helix-turn-helix domain
PAS fold
6.50E-20
1.10E-18
9.00E-06
5.40E-04
7.10E-04
WP_240627814.1 17174 16550 - 207NO PFAM MATCH---
WP_030353136.1 17362 17770 + 135PF13380CoA_binding_2CoA binding domain1.70E-36
WP_030353135.1 18394 17839 - 184PF04073tRNA_editAminoacyl-tRNA editing domain4.20E-13
WP_030353134.1 19011 18438 - 190PF07883
PF13560
PF01381
PF12844
PF13443
Cupin_2
HTH_31
HTH_3
HTH_19
HTH_26
Cupin domain
Helix-turn-helix domain
Helix-turn-helix
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
8.80E-15
1.60E-13
1.60E-12
2.70E-10
3.90E-05

Results for WP_053172326.1 [Limnohabitans planktonicus II-D5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_053172337.1 44070 43773 - 98NO PFAM MATCH---
WP_165803940.1 46196 46049 - 48NO PFAM MATCH---
WP_053172334.1 46346 48107 + 586PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
3.30E-35
1.80E-24
WP_053173531.1 48195 48378 + 60NO PFAM MATCH---
WP_053173519.1 48800 49244 + 147PF01797Y1_TnpTransposase IS200 like6.10E-13
WP_053173521.1 49576 51205 + 542PF00009
PF16658
PF03144
PF01926
PF14492
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
Elongation factor Tu GTP binding domain
Class II release factor RF3, C-terminal domain
Elongation factor Tu domain 2
50S ribosome-binding GTPase
Elongation Factor G, domain III
1.80E-51
9.00E-42
7.10E-08
3.60E-07
2.50E-04
WP_053173523.1 51663 57666 + 2000PF11974
PF01835
PF17973
PF07703
PF00207
bMG3
MG2
bMG10
A2M_BRD
A2M
Bacterial alpha-2-macroglobulin MG3 domain
MG2 domain
Bacterial Alpha-2-macroglobulin MG10 domain
Alpha-2-macroglobulin bait region domain
Alpha-2-macroglobulin family
9.20E-34
2.00E-24
3.70E-24
3.70E-20
6.70E-13
WP_053173525.1 57722 59831 + 702PF00912
PF06832
PF00905
Transgly
BiPBP_C
Transpeptidase
Transglycosylase
Penicillin-Binding Protein C-terminus Family
Penicillin binding protein transpeptidase domain
1.70E-44
7.00E-24
5.50E-21
WP_053172326.1 60369 62574 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.00E-72
6.40E-72
1.90E-07
WP_240620553.1 65240 63354 - 627PF18657YDGYDG domain4.90E-26

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001604262.1 back to top

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Couldn't process WP_001604262.1 Genbank filestream. May be corrupt.

Results for WP_000194821.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_262944308.1 74735 72470 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
9.00E-14
5.00E-07
WP_000167332.1 75249 74964 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 77078 75404 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 77875 77191 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 78809 78047 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_020898601.1 80235 78951 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-149
WP_020898600.1 81394 80305 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 82272 81579 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000194821.1 82408 84169 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-82
3.30E-65
WP_000642539.1 84573 85431 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 85490 87773 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_020898599.1 88804 87844 - 319PF11047SopDSalmonella outer protein D5.90E-178
NP_459946.1 88991 89272 + 93INFERRED GENE---
WP_000067928.1 89390 90188 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 91902 90480 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109272.1 93268 92119 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_023217513.1 94481 93617 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.30E-118

Results for WP_001747674.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001747674.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_045327254.1 [Enterobacter sp. PN108E5IIB] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_045327241.1 62464 60715 - 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
7.30E-61
2.30E-36
1.10E-09
1.60E-05
2.00E-04
WP_045327244.1 64765 62500 - 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
5.00E-52
1.10E-20
3.30E-05
WP_008499965.1 65266 64978 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
2.80E-29
3.40E-07
2.60E-04
WP_008499966.1 67110 65436 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
9.60E-99
8.90E-12
9.90E-07
WP_045327246.1 67905 67221 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.60E-85
3.60E-08
5.50E-05
3.30E-04
8.50E-04
WP_045327248.1 69374 68090 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.80E-153
WP_045327250.1 70532 69443 - 362PF00266Aminotran_5Aminotransferase class-V1.10E-71
WP_045327252.1 71387 70694 - 230PF04239DUF421Protein of unknown function (DUF421)1.70E-15
WP_045327254.1 71514 73275 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-85
6.20E-67
WP_008499974.1 73681 74539 + 285PF01226Form_Nir_transFormate/nitrite transporter1.20E-74
WP_023332542.1 74590 76873 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.10E-208
5.10E-44
WP_014883212.1 77075 77816 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.20E-33
1.60E-18
2.90E-06
WP_045327257.1 78374 77852 - 173NO PFAM MATCH---
WP_045327258.1 79645 78496 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.20E-27
3.10E-11
2.20E-05
1.30E-04
WP_045327260.1 80783 79919 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.20E-115
WP_021240882.1 81402 80784 - 205PF13247
PF00037
PF12797
PF13187
PF12838
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.00E-27
5.50E-13
6.60E-13
2.90E-12
3.40E-11
WP_045327267.1 83857 81412 - 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
4.50E-109
1.30E-28
1.90E-18

Results for YP_002346408.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_008723840.1 [Brachyspira hampsonii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008723836.1 45 1053 + 335PF00881NitroreductaseNitroreductase family2.60E-15
WP_008723838.1 1106 2198 + 363NO PFAM MATCH---
WP_008723840.1 2216 3563 + 448PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-38
WP_039955700.1 3537 4200 + 220PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.20E-08
WP_008723844.1 4196 4943 + 248PF19393DUF5968Family of unknown function (DUF5968)1.90E-06

Results for WP_009113221.1 [Brenneria nigrifluens DSM 30175 = ATCC 13028] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009113212.1 2748023 2748761 + 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
2.70E-78
1.20E-07
2.00E-06
1.40E-05
1.50E-05
WP_009113213.1 2748742 2749519 + 258PF00977
PF01207
PF03060
PF05690
His_biosynth
Dus
NMO
ThiG
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Thiazole biosynthesis protein ThiG
7.30E-74
1.90E-05
9.30E-05
7.40E-04
WP_009113214.1 2749512 2750127 + 204PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
2.30E-29
1.00E-15
WP_009113215.1 2750512 2750227 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.20E-29
1.80E-07
7.50E-04
WP_040343910.1 2752284 2750610 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.10E-96
2.20E-12
2.20E-06
WP_009113217.1 2753079 2752392 - 228PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.00E-82
5.40E-08
1.40E-05
1.00E-04
9.80E-04
WP_009113218.1 2754552 2753262 - 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.30E-149
WP_009113220.1 2755752 2754666 - 361PF00266Aminotran_5Aminotransferase class-V1.80E-63
WP_009113221.1 2755999 2757763 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-80
4.20E-63
WP_009113222.1 2758208 2759066 + 285PF01226Form_Nir_transFormate/nitrite transporter1.70E-73
WP_009113223.1 2759124 2761410 + 761PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.60E-207
3.10E-43
WP_009113224.1 2761676 2762417 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-30
4.90E-18
3.90E-06
WP_009113225.1 2764031 2762462 - 522PF05378
PF01968
PF13941
PF06406
Hydant_A_N
Hydantoinase_A
MutL
StbA
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
4.80E-34
8.60E-31
1.00E-05
3.50E-05
WP_009113226.1 2765149 2764039 - 369PF06032DUF917Protein of unknown function (DUF917)4.70E-124
WP_009113227.1 2766507 2765202 - 434PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin1.10E-19
WP_009113228.1 2766780 2767704 + 307PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
3.50E-14
5.00E-14
WP_040343247.1 2768857 2767705 - 383PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
6.40E-34
2.00E-07
4.70E-07
1.10E-06

Results for WP_050991482.1 back to top

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Couldn't process WP_050991482.1 Genbank filestream. May be corrupt.

Results for WP_003256021.1 back to top

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Couldn't process WP_003256021.1 Genbank filestream. May be corrupt.

Results for WP_010954993.1 back to top

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Couldn't process WP_010954993.1 Genbank filestream. May be corrupt.

Results for WP_060419731.1 back to top

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Couldn't process WP_060419731.1 Genbank filestream. May be corrupt.

Results for WP_054903954.1 [Pseudomonas juntendi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_054903949.1 2421409 2419660 - 582PF02028BCCTBCCT, betaine/carnitine/choline family transporter6.00E-177
WP_054903950.1 2421723 2422041 + 105NO PFAM MATCH---
WP_029887314.1 2422048 2422246 + 65PF06945DUF1289Protein of unknown function (DUF1289)2.60E-15
WP_054903951.1 2422487 2423276 + 262PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.50E-26
WP_235767773.1 2424317 2423297 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.30E-35
3.80E-23
WP_235767772.1 2425711 2424367 - 447PF00034
PF13442
PF09698
PF09699
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Paired_CXXCH_1
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
Doubled CXXCH motif (Paired_CXXCH_1)
1.80E-23
1.00E-22
7.60E-04
8.70E-04
WP_054903953.1 2427978 2425728 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
8.90E-35
8.50E-32
WP_009686563.1 2428433 2427977 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
6.10E-22
3.80E-08
3.00E-05
WP_054903954.1 2428677 2430864 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.90E-73
9.60E-73
3.30E-08
WP_054904035.1 2432594 2430872 - 573PF00890
PF01266
PF12831
FAD_binding_2
DAO
FAD_oxidored
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
6.80E-95
6.70E-08
2.20E-05
WP_054904036.1 2432502 2433267 + 254PF01614
PF09339
IclR
HTH_IclR
Bacterial transcriptional regulator
IclR helix-turn-helix domain
6.10E-27
6.40E-10
WP_054903955.1 2435142 2433291 - 616PF00005
PF00664
PF02463
PF01926
PF03193
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
RsgA GTPase
1.60E-36
2.00E-20
1.40E-07
6.30E-05
8.60E-05
WP_260779423.1 2435534 2436401 + 288PF00701DHDPSDihydrodipicolinate synthetase family2.00E-54
WP_235767771.1 2436530 2437424 + 297PF03466
PF00126
PF18024
LysR_substrate
HTH_1
HTH_50
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
Helix-turn-helix domain
2.20E-36
1.40E-18
8.90E-04
WP_054904037.1 2438304 2437434 - 289PF00892EamAEamA-like transporter family6.80E-24
WP_235767770.1 2438426 2439809 + 460PF00155
PF00392
PF12897
Aminotran_1_2
GntR
Asp_aminotransf
Aminotransferase class I and II
Bacterial regulatory proteins, gntR family
Aspartate amino-transferase
5.00E-37
1.00E-16
3.70E-04
WP_054903959.1 2439968 2441180 + 403PF02417Chromate_transpChromate transporter3.10E-71

Results for WP_001134279.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_012536967.1 [Acidithiobacillus ferrooxidans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009567117.1 5243 6185 + 313PF01435
PF05569
Peptidase_M48
Peptidase_M56
Peptidase family M48
BlaR1 peptidase M56
6.10E-31
7.60E-07
WP_012536962.1 6289 7819 + 509PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
6.80E-51
9.40E-05
WP_012536963.1 8038 7771 - 88NO PFAM MATCH---
WP_012536964.1 9056 8189 - 288PF13701
PF01609
DDE_Tnp_1_4
DDE_Tnp_1
Transposase DDE domain group 1
Transposase DDE domain
3.20E-15
7.20E-12
WP_012536965.1 9322 9001 - 106PF13701DDE_Tnp_1_4Transposase DDE domain group 19.20E-04
WP_012607314.1 9691 9331 - 119NO PFAM MATCH---
WP_054608914.1 9952 10171 + 73INFERRED GENE---
WP_257248168.1 10483 11350 + 288NO PFAM MATCH---
WP_012536967.1 11451 12756 + 434PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-26
WP_074874203.1 12865 13558 + 230PF00881NitroreductaseNitroreductase family6.60E-17
WP_148208624.1 13612 14299 + 228PF01909
PF18765
NTP_transf_2
Polbeta
Nucleotidyltransferase domain
Polymerase beta, Nucleotidyltransferase
5.40E-06
3.60E-04
WP_012536969.1 14315 14897 + 193PF03567Sulfotransfer_2Sulfotransferase family1.30E-09
WP_012536970.1 15230 17447 + 738PF02321
PF12762
OEP
DDE_Tnp_IS1595
Outer membrane efflux protein
ISXO2-like transposase domain
1.10E-53
5.30E-17
WP_012536971.1 17443 18541 + 365PF16576
PF13437
PF13533
PF00364
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Biotin-requiring enzyme
4.60E-16
2.10E-10
3.10E-09
3.10E-04
WP_012536972.1 18537 21642 + 1034PF00873ACR_tranAcrB/AcrD/AcrF family6.10E-283
WP_012536973.1 21667 22387 + 239PF00005
PF13304
PF02463
PF13476
PF13555
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
2.20E-20
1.00E-12
3.70E-09
1.80E-07
1.40E-05
WP_012536974.1 22379 23105 + 241NO PFAM MATCH---

Results for WP_010798587.1 [Pseudomonas zeshuii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010798579.1 21132 20778 - 117NO PFAM MATCH---
WP_010798580.1 21657 25404 + 1248PF00384
PF01568
PF14710
Molybdopterin
Molydop_binding
Nitr_red_alph_N
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Respiratory nitrate reductase alpha N-terminal
6.40E-148
3.30E-21
4.30E-15
WP_010798581.1 25400 26933 + 510PF13247
PF14711
PF13237
PF12838
PF13187
Fer4_11
Nitr_red_bet_C
Fer4_10
Fer4_7
Fer4_9
4Fe-4S dicluster domain
Respiratory nitrate reductase beta C-terminal
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.20E-37
1.10E-26
1.90E-08
2.30E-08
5.30E-04
WP_010798582.1 26937 27645 + 235PF02613Nitrate_red_delNitrate reductase delta subunit4.70E-10
WP_010798583.1 27656 28361 + 234PF02665Nitrate_red_gamNitrate reductase gamma subunit2.30E-77
WP_010798584.1 28357 28915 + 185PF04273BLH_phosphataseBeta-lactamase hydrolase-like protein, phosphatase-like domain4.30E-06
WP_010798585.1 28925 29804 + 292PF00639
PF13616
PF13145
Rotamase
Rotamase_3
Rotamase_2
PPIC-type PPIASE domain
PPIC-type PPIASE domain
PPIC-type PPIASE domain
1.30E-18
1.80E-15
1.90E-10
WP_083603263.1 29863 31081 + 405PF07690
PF01306
MFS_1
LacY_symp
Major Facilitator Superfamily
LacY proton/sugar symporter
9.20E-41
4.00E-04
WP_010798587.1 33450 31245 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.40E-74
2.00E-72
4.00E-08
WP_177325230.1 33875 35612 + 578PF00150CellulaseCellulase (glycosyl hydrolase family 5)4.60E-41
WP_256205735.1 35810 35933 + 40NO PFAM MATCH---
WP_010798589.1 36563 36812 + 82NO PFAM MATCH---
WP_010798590.1 36974 37490 + 171PF07883
PF02311
PF02041
PF05899
Cupin_2
AraC_binding
Auxin_BP
Cupin_3
Cupin domain
AraC-like ligand binding domain
Auxin binding protein
EutQ-like cupin domain
1.70E-19
2.10E-05
2.70E-05
1.30E-04
WP_010798592.1 37919 39110 + 396PF02518
PF00512
PF01590
PF13185
PF14501
HATPase_c
HisKA
GAF
GAF_2
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
GAF domain
GAF domain
GHKL domain
6.50E-18
9.50E-13
2.70E-07
1.20E-04
4.20E-04
WP_010798593.1 39204 39441 + 78NO PFAM MATCH---
WP_010798594.1 40100 39488 - 203PF13460
PF05368
PF03435
PF01370
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
9.40E-28
5.40E-11
4.30E-08
3.30E-05
WP_010798595.1 40211 40586 + 124PF01638
PF01022
HxlR
HTH_5
HxlR-like helix-turn-helix
Bacterial regulatory protein, arsR family
1.90E-25
1.40E-04

Results for WP_012380584.1 [Streptomyces griseus subsp. griseus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003968613.1 168213 167919 - 97PF12840
PF01022
PF12802
PF13412
HTH_20
HTH_5
MarR_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Winged helix-turn-helix DNA-binding
3.50E-20
2.20E-09
1.90E-08
8.40E-07
WP_012380578.1 168320 168815 + 164NO PFAM MATCH---
WP_202464988.1 170366 168860 - 501PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
8.20E-48
1.00E-13
2.30E-11
WP_007450496.1 171214 172003 + 263INFERRED GENE---
WP_012380581.1 171999 174585 + 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.70E-37
8.20E-22
WP_003968619.1 174925 175174 + 82NO PFAM MATCH---
WP_042498671.1 175371 177300 + 642PF03704
PF00486
PF13191
PF00931
BTAD
Trans_reg_C
AAA_16
NB-ARC
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
AAA ATPase domain
NB-ARC domain
7.30E-35
1.00E-08
5.00E-06
1.20E-04
WP_012380583.1 177304 179620 + 771PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-12
WP_012380584.1 179609 181742 + 710PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-80
WP_042496989.1 181786 183373 + 528PF00881NitroreductaseNitroreductase family3.30E-20
WP_042498679.1 183498 186180 + 893PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus7.80E-48
WP_012380587.1 186179 187226 + 348PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.10E-94
WP_202476635.1 187264 188365 + 366PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.00E-04
8.90E-04
WP_042496992.1 188390 189356 + 321PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.30E-29
4.40E-16
4.80E-05
5.00E-05
WP_012380589.1 189415 190171 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
9.30E-29
1.70E-21
WP_012380590.1 190167 192261 + 697PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-79
WP_003968635.1 192518 192341 - 58NO PFAM MATCH---

Results for WP_012380583.1 [Streptomyces griseus subsp. griseus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003968612.1 167923 167530 - 130PF00903
PF18029
PF13669
Glyoxalase
Glyoxalase_6
Glyoxalase_4
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
6.50E-16
1.80E-07
1.10E-06
WP_003968613.1 168213 167919 - 97PF12840
PF01022
PF12802
PF13412
HTH_20
HTH_5
MarR_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Winged helix-turn-helix DNA-binding
3.50E-20
2.20E-09
1.90E-08
8.40E-07
WP_012380578.1 168320 168815 + 164NO PFAM MATCH---
WP_202464988.1 170366 168860 - 501PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
8.20E-48
1.00E-13
2.30E-11
WP_007450496.1 171214 172003 + 263INFERRED GENE---
WP_012380581.1 171999 174585 + 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.70E-37
8.20E-22
WP_003968619.1 174925 175174 + 82NO PFAM MATCH---
WP_042498671.1 175371 177300 + 642PF03704
PF00486
PF13191
PF00931
BTAD
Trans_reg_C
AAA_16
NB-ARC
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
AAA ATPase domain
NB-ARC domain
7.30E-35
1.00E-08
5.00E-06
1.20E-04
WP_012380583.1 177304 179620 + 771PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-12
WP_012380584.1 179609 181742 + 710PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-80
WP_042496989.1 181786 183373 + 528PF00881NitroreductaseNitroreductase family3.30E-20
WP_042498679.1 183498 186180 + 893PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus7.80E-48
WP_012380587.1 186179 187226 + 348PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.10E-94
WP_202476635.1 187264 188365 + 366PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.00E-04
8.90E-04
WP_042496992.1 188390 189356 + 321PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.30E-29
4.40E-16
4.80E-05
5.00E-05
WP_012380589.1 189415 190171 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
9.30E-29
1.70E-21
WP_012380590.1 190167 192261 + 697PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-79

Results for WP_012380590.1 [Streptomyces griseus subsp. griseus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012380583.1 177304 179620 + 771PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-12
WP_012380584.1 179609 181742 + 710PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-80
WP_042496989.1 181786 183373 + 528PF00881NitroreductaseNitroreductase family3.30E-20
WP_042498679.1 183498 186180 + 893PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus7.80E-48
WP_012380587.1 186179 187226 + 348PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.10E-94
WP_202476635.1 187264 188365 + 366PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.00E-04
8.90E-04
WP_042496992.1 188390 189356 + 321PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.30E-29
4.40E-16
4.80E-05
5.00E-05
WP_012380589.1 189415 190171 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
9.30E-29
1.70E-21
WP_012380590.1 190167 192261 + 697PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-79
WP_003968635.1 192518 192341 - 58NO PFAM MATCH---
WP_012380591.1 192701 194039 + 445PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
1.50E-22
8.70E-08
WP_003968637.1 194035 194302 + 88NO PFAM MATCH---
WP_003968638.1 195427 194434 - 330PF00196GerEBacterial regulatory proteins, luxR family3.70E-04
WP_012380593.1 196091 199625 + 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
5.40E-32
2.50E-24
3.60E-21
7.80E-17
2.80E-15
WP_012380594.1 200234 199646 - 195PF13305
PF00440
TetR_C_33
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.70E-17
2.00E-11
WP_012380595.1 200348 201218 + 289NO PFAM MATCH---
WP_202549744.1 201359 202118 + 252PF07510
PF13395
DUF1524
HNH_4
Protein of unknown function (DUF1524)
HNH endonuclease
4.70E-12
1.00E-05

Results for WP_021320450.1 back to top

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Couldn't process WP_021320450.1 Genbank filestream. May be corrupt.

Results for WP_012515141.1 [Streptococcus equi subsp. zooepidemicus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043030537.1 68894 69980 + 361NO PFAM MATCH---
WP_231196470.1 70389 72201 + 603PF01391
PF08341
PF00746
Collagen
TED
Gram_pos_anchor
Collagen triple helix repeat (20 copies)
Thioester domain
LPXTG cell wall anchor motif
2.00E-37
3.70E-10
1.10E-04
WP_231196471.1 72516 73683 + 388PF08341
PF05887
TED
Trypan_PARP
Thioester domain
Procyclic acidic repetitive protein (PARP)
1.20E-10
6.20E-07
WP_165622926.1 74934 73815 - 372PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.40E-37
3.00E-19
4.50E-04
WP_115267075.1 76058 74930 - 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.20E-25
1.40E-19
7.00E-13
WP_165622925.1 76990 76066 - 307PF00005
PF13304
PF02463
PF03193
PF13555
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
RsgA GTPase
P-loop containing region of AAA domain
2.30E-33
3.30E-15
7.60E-05
8.20E-05
1.10E-04
WP_165622924.1 77699 77012 - 228PF19393DUF5968Family of unknown function (DUF5968)8.20E-23
WP_012679124.1 78367 77695 - 223PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.70E-08
WP_012515141.1 79700 78341 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-45
WP_043040194.1 80777 79712 - 354NO PFAM MATCH---
WP_014622422.1 81724 80773 - 316PF00881NitroreductaseNitroreductase family7.90E-15
WP_012678394.1 82116 81951 - 54NO PFAM MATCH---
WP_012515137.1 82902 82644 - 85PF05979DUF896Bacterial protein of unknown function (DUF896)5.50E-29
WP_165623031.1 85459 83419 - 679PF02092tRNA_synt_2fGlycyl-tRNA synthetase beta subunit5.40E-199
WP_165623030.1 86736 85824 - 303PF02091tRNA-synt_2eGlycyl-tRNA synthetase alpha subunit1.50E-145
WP_012515132.1 87657 87123 - 177PF04140
PF04191
ICMT
PEMT
Isoprenylcysteine carboxyl methyltransferase (ICMT) family
Phospholipid methyltransferase
2.90E-20
1.10E-05
WP_021320447.1 88635 87966 - 222PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
6.00E-29
1.80E-08
2.00E-07
7.50E-04

Results for WP_063202864.1 [Serratia plymuthica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_197913281.1 765630 763974 - 551PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-98
1.20E-11
4.80E-07
WP_063199436.1 766501 765811 - 229PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.00E-82
3.40E-08
2.20E-05
1.10E-04
WP_063199442.1 768063 766776 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.80E-150
WP_004942642.1 769263 768177 - 361PF00266Aminotran_5Aminotransferase class-V3.20E-64
NP_462022.1 769712 769883 + 57INFERRED GENE---
WP_073972103.1 770115 770694 + 192NO PFAM MATCH---
WP_081113185.1 770695 770977 + 93NO PFAM MATCH---
WP_004942633.1 772271 771224 - 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.60E-63
2.40E-26
WP_063202864.1 772419 774183 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.80E-83
1.00E-65
WP_062870379.1 774666 775527 + 286PF01226Form_Nir_transFormate/nitrite transporter2.30E-74
WP_062870378.1 775581 777864 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-206
5.70E-43
WP_063202866.1 778168 778909 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-29
1.00E-18
1.10E-05
WP_013812288.1 780104 778958 - 381PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
1.00E-30
4.80E-13
4.30E-08
7.90E-08
WP_004942622.1 780281 780650 + 122PF08818
PF18899
DUF1801
DUF5655
Domain of unknown function (DU1801)
Domain of unknown function (DUF5655)
3.20E-12
3.60E-04
WP_063202868.1 780689 781481 + 263PF12833
PF02311
PF00165
HTH_18
AraC_binding
HTH_AraC
Helix-turn-helix domain
AraC-like ligand binding domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.40E-22
3.30E-20
1.50E-17
WP_063202870.1 781579 782191 + 203PF01810LysELysE type translocator7.60E-34
WP_004942617.1 783544 782251 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.90E-35
7.90E-29

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Couldn't process WP_070557450.1 Genbank filestream. May be corrupt.

Results for WP_041175072.1 back to top

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Couldn't process WP_041175072.1 Genbank filestream. May be corrupt.

Results for WP_053889704.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000165876.1 167900 167273 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_053889701.1 168214 169363 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.30E-27
4.90E-10
1.10E-06
WP_000918506.1 169572 171003 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
6.50E-28
1.10E-12
WP_053889702.1 171912 171003 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.50E-31
1.20E-19
WP_053889703.1 172011 172602 + 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
4.60E-39
2.10E-12
WP_000111043.1 173424 172683 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292812.1 175898 173615 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000642546.1 176810 175952 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_053889704.1 178976 177215 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.30E-83
1.80E-66
WP_000642852.1 179105 179798 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_112016610.1 179996 181085 + 362PF00266Aminotran_5Aminotransferase class-V1.80E-75
WP_053889705.1 181155 182439 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.90E-149
WP_001295345.1 182606 183371 + 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000125016.1 183543 184227 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 184337 186011 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_112016609.1 186170 186455 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.60E-29
1.00E-07
1.30E-04
WP_053889706.1 186662 188927 + 754PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
2.00E-51
1.80E-19

Results for WP_001469537.1 back to top

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Couldn't process WP_001469537.1 Genbank filestream. May be corrupt.

Results for WP_032455278.1 back to top

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Couldn't process WP_032455278.1 Genbank filestream. May be corrupt.

Results for WP_019235298.1 [Legionella anisa] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019235290.1 140712 141273 + 186PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
5.20E-31
4.90E-11
WP_019235291.1 141306 142761 + 484PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
7.70E-29
7.50E-17
WP_019235292.1 143785 142762 - 340PF01978TrmBSugar-specific transcriptional regulator TrmB3.60E-04
WP_019235293.1 144001 143806 - 64NO PFAM MATCH---
WP_233437561.1 144252 145446 + 397NO PFAM MATCH---
WP_233437560.1 145513 146581 + 355PF13535ATP-grasp_4ATP-grasp domain1.60E-07
WP_019235296.1 146730 146982 + 83PF02597ThiSThiS family1.90E-06
WP_019235297.1 146986 148009 + 340PF00899ThiFThiF family4.20E-49
WP_019235298.1 148005 149067 + 353PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.00E-37
WP_019235299.1 149059 150094 + 344PF07812TfuATfuA-like protein2.40E-35

Results for WP_065362987.1 [Actinomyces oris] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_176713568.1 0 183 + 60NO PFAM MATCH---
WP_065362986.1 961 235 - 241PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
3.00E-22
3.90E-14
3.80E-05
WP_065362987.1 1225 2638 + 470PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-58

Results for WP_048032832.1 [Brevibacillus brevis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048032826.1 2810793 2811129 + 111NO PFAM MATCH---
WP_048032827.1 2811177 2811888 + 236PF14096
PF12796
PF00023
PF13637
PF13606
DUF4274
Ank_2
Ank
Ank_4
Ank_3
Domain of unknown function (DUF4274)
Ankyrin repeats (3 copies)
Ankyrin repeat
Ankyrin repeats (many copies)
Ankyrin repeat
1.60E-21
2.10E-11
1.20E-07
9.40E-07
2.50E-05
WP_048032828.1 2811893 2812268 + 124NO PFAM MATCH---
WP_082195921.1 2812291 2813488 + 398PF07690MFS_1Major Facilitator Superfamily1.40E-28
WP_048032829.1 2814101 2813501 - 199PF00440
PF13977
TetR_N
TetR_C_6
Bacterial regulatory proteins, tetR family
BetI-type transcriptional repressor, C-terminal
9.50E-18
6.00E-06
WP_048032830.1 2814281 2815199 + 305PF01040UbiAUbiA prenyltransferase family1.40E-58
WP_235617689.1 2815494 2815653 + 52NO PFAM MATCH---
WP_048032831.1 2815820 2817764 + 647NO PFAM MATCH---
WP_048032832.1 2817760 2819701 + 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-84
WP_048032833.1 2819723 2821331 + 535PF00881NitroreductaseNitroreductase family1.40E-12
WP_082195923.1 2823117 2821371 - 581PF00266
PF13302
PF00583
PF01053
PF00155
Aminotran_5
Acetyltransf_3
Acetyltransf_1
Cys_Met_Meta_PP
Aminotran_1_2
Aminotransferase class-V
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
4.40E-63
2.60E-16
3.80E-09
6.50E-09
3.30E-06
WP_048032834.1 2823394 2823931 + 178PF13302Acetyltransf_3Acetyltransferase (GNAT) domain8.10E-18
WP_048032835.1 2824189 2824801 + 203PF09335SNARE_assocSNARE associated Golgi protein1.90E-23
WP_201265925.1 2824985 2826470 + 494PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
6.40E-31
5.20E-17
WP_048032836.1 2826659 2827502 + 280PF00005
PF13304
PF02463
PF13401
PF03193
ABC_tran
AAA_21
SMC_N
AAA_22
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
RsgA GTPase
4.40E-35
1.20E-06
4.90E-06
1.10E-04
8.60E-04
WP_048032837.1 2827434 2828190 + 251PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.80E-23
WP_048032838.1 2828221 2829217 + 331PF13379
PF09084
PF12974
PF16868
PF00497
NMT1_2
NMT1
Phosphonate-bd
NMT1_3
SBP_bac_3
NMT1-like family
NMT1/THI5 like
ABC transporter, phosphonate, periplasmic substrate-binding protein
NMT1-like family
Bacterial extracellular solute-binding proteins, family 3
4.80E-27
1.70E-15
1.30E-08
7.60E-04
8.90E-04

Results for WP_036455634.1 [Mycobacterium marinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_261871344.1 1939 76 - 620PF00934PEPE family7.90E-33
WP_261862175.1 4227 2280 - 648PF13240
PF12773
PF17032
PF09297
PF18912
zinc_ribbon_2
DZR
zinc_ribbon_15
zf-NADH-PPase
DZR_2
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon family
NADH pyrophosphatase zinc ribbon domain
Double zinc ribbon domain
1.80E-12
1.10E-10
6.00E-05
1.80E-04
2.90E-04
WP_261864423.1 6555 4647 - 635PF00934PEPE family1.30E-31
WP_261862178.1 8143 6730 - 470PF07812TfuATfuA-like protein1.90E-42
WP_036455634.1 9526 8263 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-59

Results for WP_020729167.1 [Mycobacterium marinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_036449986.1 115409 114995 - 137PF00903
PF13669
PF18029
Glyoxalase
Glyoxalase_4
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
7.90E-13
5.50E-05
1.80E-04
WP_020729161.1 115636 116965 + 442PF00823
PF12484
PF09851
PPE
PPE-SVP
SHOCT
PPE family
PPE-SVP subfamily C-terminal region
Short C-terminal domain
3.70E-65
2.00E-11
1.30E-08
WP_020725423.1 117317 117641 + 107PF05305DUF732Protein of unknown function (DUF732)9.20E-18
WP_243703429.1 119024 117755 - 422PF00067p450Cytochrome P4501.30E-28
WP_020729163.1 120470 119066 - 467PF07992
PF00070
PF14759
Pyr_redox_2
Pyr_redox
Reductase_C
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
2.20E-41
1.90E-13
3.40E-07
WP_015355775.1 120682 120466 - 71PF13370
PF13459
PF06902
Fer4_13
Fer4_15
Fer4_19
4Fe-4S single cluster domain of Ferredoxin I
4Fe-4S single cluster domain
Divergent 4Fe-4S mono-cluster
6.20E-12
4.70E-10
6.40E-04
WP_020729165.1 120940 122608 + 555PF00934PEPE family4.60E-31
WP_020729166.1 123276 122634 - 213PF01083
PF12697
Cutinase
Abhydrolase_6
Cutinase
Alpha/beta hydrolase family
4.40E-60
6.70E-04
WP_020729167.1 124649 123380 - 422PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-41
WP_020729168.1 124976 128522 + 1181PF00501
PF07993
PF00550
PF01370
PF13193
AMP-binding
NAD_binding_4
PP-binding
Epimerase
AMP-binding_C
AMP-binding enzyme
Male sterility protein
Phosphopantetheine attachment site
NAD dependent epimerase/dehydratase family
AMP-binding enzyme C-terminal domain
3.40E-62
1.90E-58
7.30E-09
8.30E-08
2.30E-04
WP_020725429.1 129110 128561 - 182PF00578
PF08534
PF13098
AhpC-TSA
Redoxin
Thioredoxin_2
AhpC/TSA family
Redoxin
Thioredoxin-like domain
3.70E-21
5.30E-17
6.90E-04
WP_012394634.1 129849 129219 - 209PF00881
PF14512
Nitroreductase
TM1586_NiRdase
Nitroreductase family
Putative TM nitroreductase
9.60E-26
2.20E-05
WP_020729170.1 129972 130518 + 181PF12802
PF01047
PF01978
PF09339
PF13463
MarR_2
MarR
TrmB
HTH_IclR
HTH_27
MarR family
MarR family
Sugar-specific transcriptional regulator TrmB
IclR helix-turn-helix domain
Winged helix DNA-binding domain
2.60E-13
6.80E-12
1.00E-05
1.10E-05
3.20E-05
WP_240642801.1 130514 131681 + 388PF11376DUF3179Protein of unknown function (DUF3179)2.90E-60
WP_020729172.1 131821 133786 + 654PF00069
PF07714
PF17667
PF03109
Pkinase
PK_Tyr_Ser-Thr
Pkinase_fungal
ABC1
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Fungal protein kinase
ABC1 atypical kinase-like domain
4.50E-39
3.30E-24
1.30E-07
1.50E-05
WP_020729174.1 134504 135083 + 192PF00027
PF01402
cNMP_binding
RHH_1
Cyclic nucleotide-binding domain
Ribbon-helix-helix protein, copG family
2.20E-13
3.90E-06
WP_020729175.1 136818 135108 - 569PF00823
PF18878
PPE
PPE-PPW
PPE family
PPE-PPW subfamily C-terminal region
5.60E-57
8.10E-11

Results for WP_045362802.1 [Mycoavidus cysteinexigens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_126353870.1 904857 906849 + 663NO PFAM MATCH---
WP_045362814.1 906913 910894 + 1326PF12447
PF11880
PF02913
PF01565
PF02754
DUF3683
DUF3400
FAD-oxidase_C
FAD_binding_4
CCG
Protein of unknown function (DUF3683)
Domain of unknown function (DUF3400)
FAD linked oxidases, C-terminal domain
FAD binding domain
Cysteine-rich domain
4.00E-51
5.60E-25
1.20E-23
6.70E-23
2.00E-15
WP_045362813.1 910890 911340 + 149PF01230HITHIT domain1.30E-14
WP_045362810.1 911352 912093 + 246PF01209
PF13649
PF08241
PF13847
PF13489
Ubie_methyltran
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.60E-80
1.70E-19
1.10E-17
5.50E-15
9.60E-12
WP_081953487.1 912115 913159 + 347PF04280Tim44Tim44-like domain4.00E-15
WP_026920842.1 913606 915367 + 586PF00263
PF03958
Secretin
Secretin_N
Bacterial type II and III secretion system protein
Bacterial type II/III secretion system short domain
2.20E-39
2.30E-23
WP_126353871.1 915448 915898 + 149NO PFAM MATCH---
WP_045362804.1 915969 916899 + 309NO PFAM MATCH---
WP_045362802.1 916922 918272 + 449PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-51
WP_126353872.1 919519 918661 - 285NO PFAM MATCH---
WP_126353873.1 921867 920430 - 478PF12799
PF13855
LRR_4
LRR_8
Leucine Rich repeats (2 copies)
Leucine rich repeat
2.60E-06
3.20E-06
WP_052393735.1 922875 926871 + 1331PF00400
PF12894
PF20426
PF05729
PF00805
WD40
ANAPC4_WD40
NBCH_WD40
NACHT
Pentapeptide
WD domain, G-beta repeat
Anaphase-promoting complex subunit 4 WD40 domain
Neurobeachin beta propeller domain
NACHT domain
Pentapeptide repeats (8 copies)
1.10E-120
1.90E-59
1.20E-42
1.70E-13
2.00E-09
WP_052393734.1 927068 930947 + 1292PF00400
PF12894
PF20426
PF08662
PF17005
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
WD40_like
WD domain, G-beta repeat
Anaphase-promoting complex subunit 4 WD40 domain
Neurobeachin beta propeller domain
Eukaryotic translation initiation factor eIF2A
WD40-like domain
7.70E-125
1.80E-62
2.10E-39
2.00E-14
6.20E-14
WP_045362787.1 931139 931817 + 225PF00072
PF00196
PF04545
Response_reg
GerE
Sigma70_r4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
9.30E-19
1.10E-11
1.70E-05
WP_045362784.1 932333 934388 + 684PF01653
PF03120
PF12826
PF00533
PF14520
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
NAD-dependent DNA ligase adenylation domain
NAD-dependent DNA ligase OB-fold domain
Helix-hairpin-helix motif
BRCA1 C Terminus (BRCT) domain
Helix-hairpin-helix domain
1.80E-117
8.90E-34
1.10E-23
3.10E-12
3.70E-12
WP_045362782.1 937037 934409 - 875PF08335
PF01966
PF01842
PF01909
GlnD_UR_UTase
HD
ACT
NTP_transf_2
GlnD PII-uridylyltransferase
HD domain
ACT domain
Nucleotidyltransferase domain
1.50E-34
1.70E-09
9.20E-09
1.20E-05
WP_081953486.1 938016 937077 - 312PF00557Peptidase_M24Metallopeptidase family M247.20E-53

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001604262.1 back to top

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Couldn't process WP_001604262.1 Genbank filestream. May be corrupt.

Results for WP_072445449.1 [Burkholderia pyrrocinia] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012492245.1 194 401 + 69INFERRED GENE---
WP_072445449.1 886 2113 + 408PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-25
WP_072445448.1 2113 3415 + 433PF01053
PF01041
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Cys/Met metabolism PLP-dependent enzyme
DegT/DnrJ/EryC1/StrS aminotransferase family
1.10E-86
5.20E-04
WP_072445451.1 3975 4194 + 72NO PFAM MATCH---
WP_258365367.1 4241 4565 + 107PF17158MASE4Membrane-associated sensor, integral membrane domain8.50E-10
WP_256260781.1 4456 4906 + 149PF17158MASE4Membrane-associated sensor, integral membrane domain1.10E-08
WP_256260780.1 4832 5102 + 89PF00990GGDEFDiguanylate cyclase, GGDEF domain6.10E-28

Results for WP_017545980.1 [Nocardiopsis sp. L17-MgMaSL7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026129502.1 168299 167576 - 240PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
3.40E-42
5.00E-10
WP_233515717.1 168667 169933 + 421PF00202Aminotran_3Aminotransferase class-III1.60E-95
WP_017545986.1 169929 171105 + 391PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.90E-56
6.70E-12
WP_110049191.1 172650 171291 - 452PF00881NitroreductaseNitroreductase family1.40E-09
WP_110049192.1 173747 172646 - 366PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.30E-34
WP_110049193.1 174667 173743 - 307PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.80E-46
WP_110049194.1 177174 174663 - 836PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.70E-24
WP_233515718.1 178793 177170 - 540PF00881NitroreductaseNitroreductase family9.90E-21
WP_017545980.1 180703 178825 - 625PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-79
WP_110049196.1 182508 180699 - 602PF13241NAD_binding_7Putative NAD(P)-binding7.10E-05
WP_017545978.1 182806 182587 - 72NO PFAM MATCH---
WP_017545977.1 183340 183124 - 71NO PFAM MATCH---
WP_110049197.1 184703 183545 - 385PF02481
PF18306
DNA_processg_A
LDcluster4
DNA recombination-mediator protein A
SLOG cluster4 family
9.40E-65
4.30E-04
WP_110049198.1 186225 184704 - 506PF01078
PF13541
PF13335
PF07728
PF00493
Mg_chelatase
ChlI
Mg_chelatase_C
AAA_5
MCM
Magnesium chelatase, subunit ChlI
Subunit ChlI of Mg-chelatase
Magnesium chelatase, subunit ChlI C-terminal
AAA domain (dynein-related subfamily)
MCM P-loop domain
1.70E-82
1.10E-36
4.80E-24
3.60E-07
1.60E-06
WP_026129501.1 186596 186224 - 123PF02021
PF08378
UPF0102
NERD
Uncharacterised protein family UPF0102
Nuclease-related domain
7.30E-23
4.70E-04
WP_017545973.1 187045 186712 - 110PF10611DUF2469Protein of unknown function (DUF2469)5.70E-51
WP_110049199.1 188190 187314 - 291PF10502Peptidase_S26Signal peptidase, peptidase S265.90E-45

Results for WP_072445119.1 [Burkholderia pyrrocinia] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_034181811.1 2184 1950 - 77NO PFAM MATCH---
WP_072445125.1 3173 2351 - 273PF04954
PF08021
SIP
FAD_binding_9
Siderophore-interacting protein
Siderophore-interacting FAD-binding domain
1.70E-36
5.00E-36
WP_072445124.1 3921 3210 - 236PF03551PadRTranscriptional regulator PadR-like family1.80E-20
WP_143155810.1 4143 4326 + 60NO PFAM MATCH---
WP_072445123.1 4730 5732 + 333PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
2.70E-18
2.70E-09
WP_072445122.1 5728 9769 + 1346PF00069
PF07714
PF13191
PF13424
Pkinase
PK_Tyr_Ser-Thr
AAA_16
TPR_12
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Tetratricopeptide repeat
2.80E-42
2.90E-24
1.50E-15
4.00E-04
WP_072445121.1 9802 10147 + 114NO PFAM MATCH---
WP_072445120.1 10163 10526 + 120NO PFAM MATCH---
WP_072445119.1 10616 12854 + 745PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.70E-87
WP_072445118.1 13564 12991 - 190PF12306PixAInclusion body protein1.40E-23
WP_072445117.1 14973 13881 - 363PF13609Porin_4Gram-negative porin1.10E-51
WP_072445116.1 15873 15150 - 240PF13561
PF00106
PF01370
PF13579
adh_short_C2
adh_short
Epimerase
Glyco_trans_4_4
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Glycosyl transferase 4-like domain
1.10E-57
1.10E-42
4.80E-05
5.80E-04
WP_072445115.1 16972 15850 - 373PF08240
PF00107
PF13602
PF16912
PF13823
ADH_N
ADH_zinc_N
ADH_zinc_N_2
Glu_dehyd_C
ADH_N_assoc
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Glucose dehydrogenase C-terminus
Alcohol dehydrogenase GroES-associated
3.10E-32
2.00E-28
5.90E-09
8.80E-05
6.10E-04
WP_072445114.1 18278 16973 - 434PF07690
PF00083
PF01306
PF12832
MFS_1
Sugar_tr
LacY_symp
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
LacY proton/sugar symporter
MFS_1 like family
7.50E-47
3.00E-11
2.30E-06
4.00E-06
WP_072445113.1 18830 18296 - 177PF07883
PF12973
Cupin_2
Cupin_7
Cupin domain
ChrR Cupin-like domain
7.70E-07
2.10E-04
WP_072445128.1 19015 19996 + 326PF12833
PF00165
PF14525
HTH_18
HTH_AraC
AraC_binding_2
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-binding-like domain
9.90E-19
2.60E-12
4.60E-12
WP_072445112.1 21643 20077 - 521PF00732
PF05199
PF01266
PF00890
PF07992
GMC_oxred_N
GMC_oxred_C
DAO
FAD_binding_2
Pyr_redox_2
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
5.50E-80
1.60E-35
3.00E-11
4.00E-06
1.30E-05

Results for WP_004942630.1 [Serratia plymuthica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004942617.1 64761 66054 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.90E-35
7.90E-29
WP_237401959.1 66711 66114 - 198PF01810LysELysE type translocator6.20E-35
WP_006324543.1 67616 66824 - 263PF12833
PF02311
PF00165
HTH_18
AraC_binding
HTH_AraC
Helix-turn-helix domain
AraC-like ligand binding domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.30E-22
5.50E-21
2.00E-17
WP_202290505.1 68024 67655 - 122PF08818DUF1801Domain of unknown function (DU1801)2.10E-12
WP_004942623.1 68201 69347 + 381PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.90E-34
5.00E-13
3.70E-08
4.20E-08
WP_004942624.1 70137 69396 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-29
1.00E-18
1.10E-05
WP_020453766.1 72724 70441 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.50E-206
5.70E-43
WP_237401960.1 73615 72778 - 278PF01226Form_Nir_transFormate/nitrite transporter1.60E-74
WP_004942630.1 75895 74131 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.20E-82
1.00E-65
WP_202290506.1 76043 77090 + 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.40E-63
2.40E-26
WP_202290507.1 77173 77866 + 230PF04239DUF421Protein of unknown function (DUF421)2.20E-13
WP_004942642.1 78114 79200 + 361PF00266Aminotran_5Aminotransferase class-V3.20E-64
WP_073439481.1 79314 80601 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-150
WP_004942647.1 80876 81566 + 229PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
9.90E-83
3.70E-08
8.40E-06
1.10E-04
WP_004942650.1 81747 83421 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.50E-98
1.20E-11
5.00E-07
WP_004942652.1 83483 83768 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
4.60E-28
2.40E-07
WP_202290508.1 84020 86342 + 773PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
2.10E-50
1.70E-17
3.40E-09
2.60E-04

Results for WP_014045623.1 [Streptomyces sp. SID1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014045615.1 1917914 1919390 + 491PF07690
PF13347
MFS_1
MFS_2
Major Facilitator Superfamily
MFS/sugar transport protein
2.70E-54
3.40E-07
WP_019992714.1 1919432 1920014 + 193PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
4.40E-23
2.80E-10
WP_014045617.1 1920106 1921009 + 300PF13641
PF13632
PF00535
Glyco_tranf_2_3
Glyco_trans_2_3
Glycos_transf_2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Glycosyl transferase family 2
5.50E-08
1.40E-05
1.60E-04
WP_014045618.1 1922917 1921030 - 628PF00069
PF07714
PF00497
PF14531
PF17667
Pkinase
PK_Tyr_Ser-Thr
SBP_bac_3
Kinase-like
Pkinase_fungal
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Bacterial extracellular solute-binding proteins, family 3
Kinase-like
Fungal protein kinase
9.00E-52
2.40E-32
1.60E-31
2.80E-08
1.70E-06
WP_014045619.1 1923518 1923029 - 162PF13508
PF00583
PF13673
PF08445
Acetyltransf_7
Acetyltransf_1
Acetyltransf_10
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
FR47-like protein
3.20E-10
3.30E-10
8.80E-09
2.40E-04
WP_014045620.1 1923711 1924284 + 190PF00072
PF00196
PF08281
PF13384
Response_reg
GerE
Sigma70_r4_2
HTH_23
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
6.30E-20
1.80E-16
4.10E-04
8.90E-04
WP_019992712.1 1925445 1924284 - 386PF07730HisKA_3Histidine kinase1.40E-14
WP_014045622.1 1927027 1925584 - 480PF00881NitroreductaseNitroreductase family9.80E-12
WP_014045623.1 1929340 1927057 - 760PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-96
WP_014045624.1 1929542 1929389 - 50NO PFAM MATCH---
WP_014045625.1 1930955 1929668 - 428PF00009
PF01926
GTP_EFTU
MMR_HSR1
Elongation factor Tu GTP binding domain
50S ribosome-binding GTPase
1.60E-38
4.40E-07
WP_014045626.1 1931899 1930957 - 313PF01507PAPS_reductPhosphoadenosine phosphosulfate reductase family2.20E-45
WP_202434688.1 1932408 1931895 - 170PF01583
PF13671
PF08433
APS_kinase
AAA_33
KTI12
Adenylylsulphate kinase
AAA domain
Chromatin associated protein KTI12
1.60E-52
6.40E-09
3.80E-06
WP_014045628.1 1934369 1932497 - 623PF01546
PF00696
Peptidase_M20
AA_kinase
Peptidase family M20/M25/M40
Amino acid kinase family
2.30E-19
9.90E-18
WP_093565435.1 1935174 1934415 - 252PF13561
PF00106
adh_short_C2
adh_short
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
2.90E-42
5.40E-34
WP_014045630.1 1936280 1935182 - 365PF13469
PF00685
Sulfotransfer_3
Sulfotransfer_1
Sulfotransferase family
Sulfotransferase domain
7.10E-13
5.50E-07
WP_014045631.1 1937201 1936310 - 296NO PFAM MATCH---

Results for WP_003407188.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011406735.1 [Methanosphaera stadtmanae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011406727.1 27689 26975 - 237PF04446
PF14413
Thg1
Thg1C
tRNAHis guanylyltransferase
Thg1 C terminal domain
3.30E-32
6.00E-05
WP_112149672.1 28531 27760 - 256PF01958
PF03447
PF01113
PF01408
PF01118
Asp_DH_C
NAD_binding_3
DapB_N
GFO_IDH_MocA
Semialdhyde_dh
Aspartate dehydrogenase, C-terminal
Homoserine dehydrogenase, NAD binding domain
Dihydrodipicolinate reductase, N-terminus
Oxidoreductase family, NAD-binding Rossmann fold
Semialdehyde dehydrogenase, NAD binding domain
7.90E-31
3.00E-20
3.90E-06
1.00E-04
6.10E-04
WP_011406729.1 28935 28554 - 126PF05239PRCPRC-barrel domain6.70E-10
WP_048059884.1 29206 29932 + 241PF18489
PF01588
Alpha_Helical
tRNA_bind
Alpha helical domain
Putative tRNA binding domain
3.20E-53
5.60E-16
WP_011406731.1 30150 29949 - 66PF04021Class_IIIsignalClass III signal peptide1.70E-07
WP_112149673.1 31082 30158 - 307PF00482T2SSFType II secretion system (T2SS), protein F6.50E-18
WP_011406733.1 32160 31158 - 333PF00557
PF01321
PF16189
Peptidase_M24
Creatinase_N
Creatinase_N_2
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
Creatinase/Prolidase N-terminal domain
3.80E-55
7.50E-09
1.90E-04
WP_112149674.1 32305 32929 + 207PF02163
PF19470
Peptidase_M50
DUF6007
Peptidase family M50
Family of unknown function (DUF6007)
9.10E-10
2.30E-05
WP_011406735.1 33141 34332 + 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-89
WP_011406736.1 34342 34681 + 112PF01981PTH2Peptidyl-tRNA hydrolase PTH28.20E-46
WP_011406737.1 34691 35351 + 219PF00696AA_kinaseAmino acid kinase family3.50E-16
WP_011406738.1 35352 35517 + 54PF07754HVO_2753_ZBPSmall zinc finger protein HVO_2753-like, Zn-binding pocket6.10E-13
WP_011406739.1 35556 35823 + 88PF00736EF1_GNEEF-1 guanine nucleotide exchange domain9.80E-21
WP_011406740.1 35939 37181 + 413PF01970TctATripartite tricarboxylate transporter TctA family1.50E-55
WP_181454862.1 38109 37173 - 311PF06325
PF02005
PF05175
PF03602
PF13649
PrmA
TRM
MTS
Cons_hypoth95
Methyltransf_25
Ribosomal protein L11 methyltransferase (PrmA)
N2,N2-dimethylguanosine tRNA methyltransferase
Methyltransferase small domain
Conserved hypothetical protein 95
Methyltransferase domain
8.50E-08
2.20E-06
2.80E-06
1.00E-05
1.20E-05
WP_011406742.1 38203 39538 + 444PF00437
PF06414
T2SSE
Zeta_toxin
Type II/IV secretion system protein
Zeta toxin
2.40E-57
4.20E-05
WP_112149676.1 39534 40368 + 277PF00482
PF09972
T2SSF
DUF2207
Type II secretion system (T2SS), protein F
Predicted membrane protein (DUF2207)
2.00E-19
4.80E-05

Results for WP_064494169.1 [Pseudomonas sp. MDMC224] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_112210757.1 225444 227043 + 532PF00206
PF14698
Lyase_1
ASL_C2
Lyase
Argininosuccinate lyase C-terminal
5.50E-21
2.50E-07
WP_112210758.1 227100 227688 + 195NO PFAM MATCH---
WP_045734285.1 228902 227690 - 403PF00375SDFSodium:dicarboxylate symporter family4.60E-71
WP_021488242.1 229214 230132 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.80E-45
4.50E-22
WP_112210759.1 230739 230136 - 200PF12804NTP_transf_3MobA-like NTP transferase domain1.00E-34
WP_112210760.1 231709 230854 - 284PF01965
PF17124
DJ-1_PfpI
ThiJ_like
DJ-1/PfpI family
ThiJ/PfpI family-like
6.70E-17
2.70E-10
WP_021488245.1 232026 231711 - 104PF03992ABMAntibiotic biosynthesis monooxygenase1.20E-14
WP_112210761.1 232121 233051 + 309PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.30E-18
8.30E-16
WP_064494169.1 235272 233073 - 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
5.60E-74
3.50E-73
2.20E-07
WP_055983726.1 236333 235400 - 310PF03466
PF00126
PF13556
PF12727
LysR_substrate
HTH_1
HTH_30
PBP_like
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
PBP superfamily domain
1.40E-48
8.20E-20
6.00E-06
5.50E-05
WP_055983722.1 236545 237622 + 358PF04303
PF05544
PrpF
Pro_racemase
PrpF protein
Proline racemase
7.50E-121
7.40E-06
WP_055983720.1 237661 238912 + 416PF03573OprDouter membrane porin, OprD family2.40E-153
WP_021488251.1 238953 239934 + 326PF03401TctCTripartite tricarboxylate transporter family receptor5.80E-15
WP_021488252.1 239987 240440 + 150PF07331TctBTripartite tricarboxylate transporter TctB family6.20E-21
WP_112210762.1 240444 241959 + 504PF01970TctATripartite tricarboxylate transporter TctA family2.50E-142
WP_112210763.1 241973 242903 + 309PF02826
PF00389
PF03446
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NAD binding domain of 6-phosphogluconate dehydrogenase
5.80E-50
2.70E-17
1.40E-04
WP_112210764.1 243089 244034 + 314PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.10E-30
1.90E-21

Results for WP_004809371.1 [Acinetobacter schindleri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004809385.1 1614795 1615809 + 337PF01435
PF18958
Peptidase_M48
DUF5700
Peptidase family M48
Putative zinc dependent peptidase (DUF5700)
1.90E-17
5.00E-04
WP_004809384.1 1615899 1616103 + 67NO PFAM MATCH---
WP_004809382.1 1616720 1616111 - 202PF01914MarCMarC family integral membrane protein1.20E-14
YP_004994476.1 1616748 1618799 + 683INFERRED GENE---
WP_004809378.1 1619054 1619660 + 201PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
1.00E-29
2.50E-11
WP_004809376.1 1619656 1621132 + 491PF00171AldedhAldehyde dehydrogenase family5.40E-175
WP_108675984.1 1621143 1622799 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.30E-96
2.20E-40
5.40E-04
WP_004809373.1 1622926 1623697 + 256NO PFAM MATCH---
WP_004809371.1 1624039 1626241 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.70E-75
6.90E-73
8.30E-09
WP_004809370.1 1626483 1627482 + 332PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domain6.70E-04
WP_004809367.1 1627469 1628264 + 264PF02585PIG-LGlcNAc-PI de-N-acetylase1.10E-24
WP_004809365.1 1628244 1628853 + 202PF05401
PF13649
PF08241
PF13489
PF08242
NodS
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Nodulation protein S (NodS)
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-13
7.00E-11
1.40E-09
2.10E-08
3.30E-08
WP_004809364.1 1628849 1629572 + 240PF00535
PF13641
PF13632
PF13506
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Glycosyl transferase family 21
4.10E-11
3.60E-08
5.90E-05
6.90E-04
WP_034423874.1 1629782 1631015 + 410PF07690MFS_1Major Facilitator Superfamily2.10E-27
WP_004809362.1 1632477 1631046 - 476PF00982Glyco_transf_20Glycosyltransferase family 201.30E-95
WP_228127294.1 1633295 1632443 - 283PF02358
PF08282
PF05116
Trehalose_PPase
Hydrolase_3
S6PP
Trehalose-phosphatase
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
2.00E-26
4.10E-13
5.50E-06
WP_004809360.1 1633857 1634649 + 263PF02129Peptidase_S15X-Pro dipeptidyl-peptidase (S15 family)2.60E-41

Results for WP_005703702.1 [Aggregatibacter aphrophilus ATCC 33389] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005703712.1 589771 591544 + 590PF01019G_glu_transpeptGamma-glutamyltranspeptidase1.30E-189
WP_005703711.1 593471 592247 - 407PF00480
PF01047
ROK
MarR
ROK family
MarR family
4.40E-69
9.50E-05
WP_005703710.1 594838 593533 - 434PF05201
PF01488
PF00745
PF03435
GlutR_N
Shikimate_DH
GlutR_dimer
Sacchrp_dh_NADP
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
Saccharopine dehydrogenase NADP binding domain
2.50E-48
1.10E-45
7.40E-20
1.30E-04
WP_005703708.1 595855 595153 - 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.80E-16
1.60E-10
4.50E-06
WP_032995126.1 595875 596571 + 231PF08241
PF13489
PF13649
Methyltransf_11
Methyltransf_23
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.00E-10
2.10E-06
2.70E-05
WP_005703706.1 598136 596642 - 497PF02378
PF00367
PTS_EIIC
PTS_EIIB
Phosphotransferase system, EIIC
phosphotransferase system, EIIB
3.10E-77
1.10E-13
WP_005703705.1 598682 598349 - 110PF07411DUF1508Domain of unknown function (DUF1508)2.50E-38
WP_005703703.1 598885 600088 + 400PF20511PMI_typeI_catPhosphomannose isomerase type I, catalytic domain4.80E-32
WP_005703702.1 600186 601950 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-77
1.20E-63
WP_032995104.1 602118 602427 + 102PF07119DUF1375Protein of unknown function (DUF1375)2.00E-10
WP_032995103.1 602564 602972 + 135PF06295
PF11382
DUF1043
MctB
Protein of unknown function (DUF1043)
Copper transport outer membrane protein, MctB
5.90E-44
9.50E-04
WP_005702689.1 603149 603812 + 220PF01027Bax1-IInhibitor of apoptosis-promoting Bax19.80E-35
WP_005703700.1 603897 604227 + 109PF04358DsrCDsrC like protein2.40E-44
WP_050332759.1 604325 605207 + 293PF01297ZnuAZinc-uptake complex component A periplasmic2.50E-82
WP_005703696.1 605206 606097 + 296PF00005
PF13304
PF13555
PF02463
PF13558
ABC_tran
AAA_21
AAA_29
SMC_N
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RecF/RecN/SMC N terminal domain
SbcC/RAD50-like, Walker B motif
1.20E-29
1.80E-08
2.80E-06
5.50E-06
8.70E-04
WP_005703695.1 606096 606954 + 285PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
4.30E-88
2.40E-07
WP_050332757.1 606950 607799 + 282PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
1.70E-92
1.70E-07

Results for WP_063102960.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000165876.1 65401 64774 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_000109295.1 65715 66864 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.90E-27
4.00E-10
1.00E-06
WP_000918506.1 67073 68504 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
6.50E-28
1.10E-12
WP_001242678.1 69413 68504 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.90E-32
1.20E-19
WP_001190382.1 69512 70103 + 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
6.10E-39
2.10E-12
WP_000111043.1 70925 70184 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292822.1 73399 71116 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.70E-209
1.60E-43
WP_000642546.1 74311 73453 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_063102960.1 76477 74716 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.30E-83
6.30E-67
WP_000642849.1 76606 77299 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 77497 78586 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000445231.1 78656 79940 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_001295345.1 80108 80873 + 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000125016.1 81045 81729 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 81839 83513 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 83672 83957 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000705700.1 84163 86428 + 754PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
1.40E-51
3.70E-19

Results for WP_016350518.1 [Aeromonas hydrophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_118881361.1 6113 5018 - 364PF00005
PF08402
PF13304
PF09818
PF02463
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
ABC transporter
TOBE domain
AAA domain, putative AbiEii toxin, Type IV TA system
ATPase of the ABC class
RecF/RecN/SMC N terminal domain
2.70E-33
8.30E-09
4.90E-08
6.30E-06
5.30E-05
WP_118881360.1 7402 6382 - 339PF13343
PF13416
PF01547
PF13531
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.50E-29
1.00E-19
1.80E-15
6.90E-14
WP_026141379.1 8230 7522 - 235PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.50E-34
1.60E-19
WP_118881358.1 8471 9614 + 380PF00266Aminotran_5Aminotransferase class-V1.30E-22
WP_118881357.1 9610 11050 + 479PF00202Aminotran_3Aminotransferase class-III4.80E-78
WP_118881356.1 11042 11882 + 279PF12710HADhaloacid dehalogenase-like hydrolase7.80E-04
WP_196481571.1 14293 12004 - 762PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.60E-201
4.70E-43
WP_011705812.1 15181 14332 - 282PF01226Form_Nir_transFormate/nitrite transporter1.50E-73
WP_016350518.1 17322 15561 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-78
3.50E-65
WP_011705814.1 17764 17449 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.50E-29
WP_077096509.1 18103 19219 + 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.40E-58
5.30E-23
WP_118881355.1 19835 22613 + 925PF05193
PF00675
Peptidase_M16_C
Peptidase_M16
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
5.50E-36
1.10E-25
WP_101615215.1 23870 22706 - 387PF01053
PF00155
PF03841
PF00266
Cys_Met_Meta_PP
Aminotran_1_2
SelA
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
L-seryl-tRNA selenium transferase
Aminotransferase class-V
2.50E-134
2.50E-06
7.50E-05
1.20E-04
WP_118881354.1 25048 23977 - 356PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
1.70E-33
6.70E-19
WP_019838689.1 26146 25507 - 212PF13460
PF05368
PF03435
PF01370
PF01073
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
3Beta_HSD
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
8.30E-27
2.30E-09
2.80E-07
8.50E-07
3.20E-04
WP_011705820.1 26247 27153 + 301PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
3.00E-40
3.50E-22
3.40E-04
WP_011705821.1 28008 27267 - 246PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
5.60E-57
5.20E-55
1.40E-18
6.30E-08
9.50E-05

Results for WP_027705677.1 [Zymobacter palmae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_156934044.1 1412230 1412089 - 46NO PFAM MATCH---
WP_027705671.1 1412466 1412280 - 61NO PFAM MATCH---
WP_084261861.1 1414017 1413291 - 241PF15607Ntox44Bacterial toxin 441.50E-23
WP_232012884.1 1414535 1414013 - 173PF05488PAAR_motifPAAR motif2.50E-13
WP_156934046.1 1414788 1414950 + 53NO PFAM MATCH---
WP_027705673.1 1415078 1415831 + 250PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
1.40E-45
1.90E-38
1.50E-11
WP_038278890.1 1415950 1416979 + 342PF01497Peripla_BP_2Periplasmic binding protein1.90E-37
WP_197714373.1 1416987 1417986 + 332PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
2.30E-81
5.40E-10
WP_027705676.1 1417992 1418736 + 247PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
8.50E-29
1.80E-07
3.50E-06
9.10E-05
WP_027705677.1 1420918 1419181 - 578PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-75
3.20E-33
WP_051523992.1 1422050 1421051 - 332PF01464SLTTransglycosylase SLT domain1.10E-20
WP_051523993.1 1422946 1422130 - 271PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
6.90E-28
2.20E-10
1.20E-04
WP_051523994.1 1423086 1423887 + 266PF08241Methyltransf_11Methyltransferase domain2.20E-05
WP_027705679.1 1423873 1424353 + 159PF00075RNase_HRNase H4.50E-52
WP_019017743.1 1424501 1425238 + 245INFERRED GENE---
WP_084261863.1 1425230 1426073 + 280PF00293
PF09297
NUDIX
zf-NADH-PPase
NUDIX domain
NADH pyrophosphatase zinc ribbon domain
1.50E-16
5.20E-12
WP_027705682.1 1426187 1427225 + 345PF08496
PF01343
PF01972
Peptidase_S49_N
Peptidase_S49
SDH_sah
Peptidase family S49 N-terminal
Peptidase family S49
Serine dehydrogenase proteinase
1.30E-41
1.60E-39
9.30E-05
WP_051523996.1 1427580 1428285 + 234PF02592Vut_1Putative vitamin uptake transporter3.50E-30

Results for WP_062743875.1 [Erwinia persicina] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_062743868.1 120531 119550 - 326PF02606
PF13439
LpxK
Glyco_transf_4
Tetraacyldisaccharide-1-P 4'-kinase
Glycosyltransferase Family 4
3.20E-113
8.40E-05
WP_062743869.1 122276 120527 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
1.10E-56
1.20E-35
4.60E-10
2.90E-05
1.70E-04
WP_191931105.1 124576 122311 - 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
1.80E-52
1.60E-19
5.70E-06
4.70E-04
WP_062743871.1 125080 124792 - 95PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.30E-28
1.90E-07
WP_062743872.1 126837 125160 - 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.20E-98
1.00E-12
8.50E-07
WP_062743873.1 127674 126990 - 227PF02224
PF13189
PF00005
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
ABC_tran
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
ABC transporter
AAA domain
AAA domain
5.70E-83
5.40E-07
4.60E-04
5.10E-04
8.60E-04
WP_062743899.1 129108 127821 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.70E-148
WP_118664357.1 130276 129190 - 361PF00266Aminotran_5Aminotransferase class-V1.30E-63
WP_062743875.1 130585 132343 + 585PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.00E-81
2.30E-67
WP_194716045.1 132754 133570 + 271PF01226Form_Nir_transFormate/nitrite transporter4.10E-76
WP_062743877.1 133659 135942 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.40E-205
2.20E-42
WP_062743878.1 136070 136811 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.60E-32
1.60E-17
2.10E-05
WP_062743879.1 138046 136894 - 383PF07690
PF06779
PF00083
PF12832
PF13347
MFS_1
MFS_4
Sugar_tr
MFS_1_like
MFS_2
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
MFS/sugar transport protein
4.60E-34
1.40E-12
1.90E-08
5.70E-07
4.80E-04
WP_062743880.1 139624 138331 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
7.10E-36
3.30E-32
WP_194716044.1 141006 139719 - 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
7.20E-65
8.70E-24
5.20E-16
2.10E-14
9.70E-07
WP_062743882.1 141682 141070 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
5.00E-59
1.90E-05
WP_137268910.1 145263 141879 - 1127PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
1.50E-72
1.40E-41
4.70E-29
1.10E-27
4.60E-05

Results for WP_039047313.1 [Acinetobacter junii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_149931232.1 9217 8308 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.40E-33
6.20E-16
WP_149931231.1 9332 9818 + 161PF04945YHSYHS domain8.80E-12
WP_151738898.1 10073 10397 + 107PF12680SnoaL_2SnoaL-like domain5.40E-06
WP_228270409.1 11119 10693 - 141PF01625PMSRPeptide methionine sulfoxide reductase2.90E-44
WP_215903018.1 11949 11358 - 196PF00578
PF08534
PF13905
AhpC-TSA
Redoxin
Thioredoxin_8
AhpC/TSA family
Redoxin
Thioredoxin-like
1.10E-13
4.80E-13
1.40E-09
WP_228270411.1 12379 11977 - 133PF01641
PF03226
SelR
Yippee-Mis18
SelR domain
Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
4.10E-53
3.30E-05
GBY56_RS14725 14033 14746 + 237INFERRED GENE---
WP_042892037.1 14842 15916 + 357PF04909Amidohydro_2Amidohydrolase1.20E-20
WP_039047313.1 16177 18373 + 731PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-74
3.80E-74
1.50E-08
WP_228270300.1 18595 19405 + 269PF20375DUF6670Family of unknown function (DUF6670)2.50E-55

Results for WP_001375852.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000445213.1 1375 91 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)8.40E-151
WP_000057132.1 2534 1445 - 362PF00266Aminotran_5Aminotransferase class-V2.80E-76
WP_000642849.1 3425 2732 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_001375852.1 3554 5315 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-82
6.30E-67

Results for WP_000192994.1 back to top

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Couldn't process WP_000192994.1 Genbank filestream. May be corrupt.

Results for WP_042385468.1 [Parageobacillus thermoglucosidasius] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_052518196.1 563676 561801 - 624PF13175
PF13304
PF11398
PF13476
PF02463
AAA_15
AAA_21
DUF2813
AAA_23
SMC_N
AAA ATPase domain
AAA domain, putative AbiEii toxin, Type IV TA system
Protein of unknown function (DUF2813)
AAA domain
RecF/RecN/SMC N terminal domain
4.50E-71
3.80E-15
1.60E-07
2.20E-07
3.20E-06
DV712_RS20060 563952 564614 + 220INFERRED GENE---
WP_155267354.1 564630 565248 + 205PF18476
PF09966
PIN_8
DUF2200
PIN like domain
Uncharacterized protein conserved in bacteria (DUF2200)
6.30E-05
9.20E-04
WP_042385481.1 566244 565908 - 111NO PFAM MATCH---
WP_041269408.1 567717 567357 - 119NO PFAM MATCH---
WP_072000124.1 567982 568273 + 96NO PFAM MATCH---
WP_232511595.1 568178 568421 + 80NO PFAM MATCH---
WP_042385471.1 568477 570448 + 656NO PFAM MATCH---
WP_042385468.1 570447 572391 + 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.70E-88
WP_042385465.1 572402 573983 + 526PF00881NitroreductaseNitroreductase family3.00E-15
WP_196219158.1 574281 574197 - 27PF09680YjcZ_2Family of unknown function1.20E-12
WP_013400797.1 574514 574676 + 54INFERRED GENE---
WP_042385459.1 576095 574820 - 424PF00015
PF00672
PF20155
MCPsignal
HAMP
TMP_3
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
Tape measure protein
2.70E-55
5.00E-17
4.50E-05
WP_003252863.1 578332 577402 - 309NO PFAM MATCH---
WP_042385454.1 578551 578791 + 79NO PFAM MATCH---
WP_042385451.1 578905 579355 + 149PF00583
PF13508
PF13527
PF09924
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_9
LPG_synthase_C
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Phosphatidylglycerol lysyltransferase, C-terminal
Acetyltransferase (GNAT) domain
6.10E-10
3.60E-06
4.30E-05
1.10E-04
3.60E-04
WP_013401627.1 579594 579783 + 62NO PFAM MATCH---

Results for WP_070713614.1 [Haemophilus parainfluenzae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_083313286.1 64352 63902 - 149PF00717Peptidase_S24Peptidase S24-like8.10E-12
WP_070713599.1 64625 65867 + 413PF00375SDFSodium:dicarboxylate symporter family1.80E-61
WP_070713601.1 65925 67374 + 482PF00005
PF13304
PF02463
PF13401
PF13555
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
4.20E-42
1.20E-15
5.00E-14
1.40E-09
9.60E-08
WP_049364327.1 67419 68334 + 304PF01145
PF16200
Band_7
Band_7_C
SPFH domain / Band 7 family
C-terminal region of band_7
1.30E-32
1.70E-07
WP_070713603.1 68386 68842 + 151PF01957NfeDNfeD-like C-terminal, partner-binding3.10E-13
WP_070713605.1 68838 69444 + 201PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
1.00E-45
3.60E-09
WP_070713609.1 69467 70025 + 185NO PFAM MATCH---
WP_070713611.1 72769 70123 - 881PF00521
PF03989
DNA_topoisoIV
DNA_gyraseA_C
DNA gyrase/topoisomerase IV, subunit A
DNA gyrase C-terminal domain, beta-propeller
9.00E-153
4.60E-78
WP_070713614.1 74686 72922 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.80E-80
1.40E-62
WP_111382864.1 74865 75204 + 112PF07411DUF1508Domain of unknown function (DUF1508)6.00E-42
WP_070713619.1 75921 75204 - 238PF08241
PF13649
Methyltransf_11
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
8.80E-09
2.70E-04
WP_070713621.1 75931 76633 + 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
7.60E-14
4.20E-12
2.20E-05
WP_070713624.1 76768 78091 + 440PF05201
PF01488
PF00745
GlutR_N
Shikimate_DH
GlutR_dimer
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
5.40E-49
3.40E-46
5.20E-21
WP_070713627.1 78074 78818 + 247PF09992NAGPAPhosphodiester glycosidase9.30E-20
WP_111415876.1 81053 79469 - 527PF00009
PF16658
PF03144
PF01926
PF14492
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
Elongation factor Tu GTP binding domain
Class II release factor RF3, C-terminal domain
Elongation factor Tu domain 2
50S ribosome-binding GTPase
Elongation Factor G, domain III
6.70E-47
1.20E-46
2.50E-10
7.10E-06
9.60E-05
WP_049364315.1 81275 82136 + 286PF01259SAICAR_syntSAICAR synthetase6.40E-103
WP_049364314.1 82208 83039 + 276PF03446NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenase3.60E-04

Results for WP_067999472.1 [Nocardia pseudobrasiliensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_067999484.1 193857 193359 - 165PF00196
PF08281
PF04545
PF13412
PF13545
GerE
Sigma70_r4_2
Sigma70_r4
HTH_24
HTH_Crp_2
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
5.80E-17
1.10E-08
1.60E-06
1.00E-04
1.60E-04
WP_067999483.1 195026 194099 - 308PF04072LCMLeucine carboxyl methyltransferase9.70E-34
WP_169813766.1 196080 194994 - 361PF00067p450Cytochrome P4507.80E-28
WP_067999479.1 196475 196295 - 59PF19409Thiopep_preThiopeptide-type bacteriocin precursor7.10E-07
WP_211335851.1 196732 197980 + 415PF00067p450Cytochrome P4509.70E-24
WP_067999477.1 197983 200635 + 883PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.30E-30
WP_067999475.1 200624 201587 + 320PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.90E-40
WP_067999473.1 201583 203029 + 481PF00881NitroreductaseNitroreductase family3.80E-17
WP_067999472.1 203025 204945 + 639PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.70E-81
WP_067999813.1 205445 204953 - 163PF04461DUF520Protein of unknown function (DUF520)1.90E-62
WP_011211653.1 206162 206333 + 56PF00471Ribosomal_L33Ribosomal protein L334.40E-22
WP_114755599.1 206468 207548 + 359PF13452
PF01575
MaoC_dehydrat_N
MaoC_dehydratas
N-terminal half of MaoC dehydratase
MaoC like domain
3.00E-37
1.00E-31
WP_067999809.1 207890 208283 + 130PF00584SecESecE/Sec61-gamma subunits of protein translocation complex8.60E-22
WP_245997837.1 208440 209133 + 230PF02357NusGTranscription termination factor nusG1.60E-27
WP_067999467.1 209172 209607 + 144PF03946
PF00298
Ribosomal_L11_N
Ribosomal_L11
Ribosomal protein L11, N-terminal domain
Ribosomal protein L11, RNA binding domain
3.10E-29
2.50E-28
WP_067999465.1 209739 210453 + 237PF00687Ribosomal_L1Ribosomal protein L1p/L10e family4.30E-50
WP_067999463.1 210877 211432 + 184PF00466Ribosomal_L10Ribosomal protein L105.30E-26

Results for WP_068000483.1 [Nocardia pseudobrasiliensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_068000461.1 453170 452519 - 216PF09203MspAMspA5.30E-33
WP_169813777.1 453376 453175 - 66NO PFAM MATCH---
WP_068000467.1 454103 453389 - 237PF09203MspAMspA3.10E-35
WP_068000470.1 454924 454639 - 94NO PFAM MATCH---
WP_068000473.1 454912 455788 + 291NO PFAM MATCH---
WP_068000476.1 455784 456327 + 180NO PFAM MATCH---
WP_068000479.1 456337 458770 + 810PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.10E-11
WP_068000480.1 458759 460337 + 525NO PFAM MATCH---
WP_068000483.1 460329 462123 + 597PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-50
WP_068000486.1 462119 463352 + 410NO PFAM MATCH---
WP_068000489.1 463348 464155 + 268PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-25
WP_068000492.1 464154 465219 + 354PF00296Bac_luciferaseLuciferase-like monooxygenase3.60E-52
WP_068000497.1 465234 466128 + 297PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
3.10E-21
3.70E-10
7.20E-07
2.50E-05
WP_068000500.1 466130 466877 + 248PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.50E-12
6.20E-08
WP_068000504.1 467553 466881 - 223PF00072
PF00196
PF08281
PF04545
PF13412
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_24
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
5.10E-27
1.80E-19
3.40E-07
1.50E-06
4.00E-04
WP_169813778.1 468713 467549 - 387PF07730HisKA_3Histidine kinase3.60E-20
WP_147287908.1 468870 469302 + 143NO PFAM MATCH---

Results for WP_016558002.1 [Rhizobium grahamii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016557993.1 555397 554494 - 300PF19368AraR_CAraR C-terminal winged HTH domain1.80E-06
WP_244919863.1 555504 555768 + 87NO PFAM MATCH---
WP_114714925.1 556836 557118 + 93NO PFAM MATCH---
WP_114714926.1 557546 557726 + 59NO PFAM MATCH---
WP_016557998.1 557876 557726 - 49NO PFAM MATCH---
WP_016557999.1 558603 558996 + 130PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
2.40E-12
1.20E-07
3.40E-07
WP_016558000.1 559291 559021 - 89NO PFAM MATCH---
WP_016558001.1 560103 559356 - 248PF07812TfuATfuA-like protein9.10E-41
WP_016558002.1 561353 560099 - 417PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.80E-67
WP_016558003.1 563568 561621 - 648PF03704
PF07719
PF13432
PF13428
PF14559
BTAD
TPR_2
TPR_16
TPR_14
TPR_19
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
5.00E-12
7.30E-09
9.60E-07
2.50E-05
7.70E-05
WP_016558004.1 564819 563778 - 346PF00120
PF03951
Gln-synt_C
Gln-synt_N
Glutamine synthetase, catalytic domain
Glutamine synthetase, beta-Grasp domain
1.10E-16
1.70E-15
WP_016558005.1 565294 565498 + 67PF10931DUF2735Protein of unknown function (DUF2735)5.40E-11
WP_114714927.1 565669 566899 + 409PF03486
PF01266
PF13450
PF00070
PF01494
HI0933_like
DAO
NAD_binding_8
Pyr_redox
FAD_binding_3
HI0933-like protein
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
3.70E-98
6.50E-06
1.70E-05
1.80E-04
4.30E-04
WP_016558007.1 567811 566986 - 274PF02548Pantoate_transfKetopantoate hydroxymethyltransferase1.50E-104
WP_114714928.1 568686 567810 - 291PF02569Pantoate_ligasePantoate-beta-alanine ligase4.60E-100
WP_016558009.1 569043 569712 + 222PF00226DnaJDnaJ domain3.20E-17
WP_016558010.1 570744 569742 - 333PF04280Tim44Tim44-like domain1.40E-26

Results for WP_001516111.1 [Escherichia marmotae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_258291640.1 76794 74529 - 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.70E-52
2.10E-19
4.30E-04
WP_000167336.1 77284 76999 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 79117 77443 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_001516113.1 79911 79227 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
9.60E-85
2.20E-07
3.00E-04
9.70E-04
WP_001516112.1 80848 80083 - 254PF01435Peptidase_M48Peptidase family M482.10E-26
WP_000445220.1 82300 81016 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-152
WP_000057146.1 83460 82371 - 362PF00266Aminotran_5Aminotransferase class-V4.00E-76
WP_000642842.1 84350 83657 - 230PF04239DUF421Protein of unknown function (DUF421)1.00E-15
WP_001516111.1 84479 86240 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-84
7.90E-67
WP_000642551.1 86646 87504 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-74
WP_001292821.1 87558 89841 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.90E-209
1.60E-43
WP_000468308.1 90379 90160 - 72PF04606Ogr_DeltaOgr/Delta-like zinc finger2.10E-21
WP_258291641.1 91624 90460 - 387PF05954Phage_GPDPhage tail baseplate hub (GPD)8.10E-50
WP_047661785.1 92103 91623 - 159PF06995Phage_P2_GpUPhage P2 GpU3.90E-44
WP_258291642.1 94565 92117 - 815PF10145PhageMin_TailPhage-related minor tail protein2.00E-37
WP_000785970.1 94677 94557 - 39PF06528Phage_P2_GpEPhage P2 GpE2.30E-23
WP_001031303.1 94985 94709 - 91PF10109Phage_TAC_7Phage tail assembly chaperone proteins, E, or 41 or 144.60E-10

Results for WP_004974409.1 [Haloferax sp. Atlit-4N] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_050459805.1 72581 73292 + 236NO PFAM MATCH---
WP_004974397.1 73334 73568 + 77NO PFAM MATCH---
WP_004974399.1 74105 73592 - 170PF00293NUDIXNUDIX domain2.30E-15
WP_004974400.1 75008 74114 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
1.10E-36
WP_004974402.1 75677 75107 - 189PF01988VIT1VIT family1.00E-08
WP_004974404.1 75976 75676 - 99PF02680DUF211Uncharacterized ArCR, COG18886.70E-34
WP_004974406.1 77319 76071 - 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
7.90E-153
1.10E-08
8.60E-06
WP_049905040.1 77685 78513 + 275PF19138DUF5821Family of unknown function (DUF5821)8.10E-96
WP_004974409.1 78562 80251 + 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-56
WP_004974411.1 81587 80468 - 372PF01889DUF63Membrane protein of unknown function DUF639.30E-37
WP_004974414.1 82210 81739 - 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.60E-08
3.10E-07
WP_115804985.1 83101 82303 - 265PF00459Inositol_PInositol monophosphatase family6.40E-49
WP_050459798.1 83192 83462 + 89NO PFAM MATCH---
WP_115804986.1 85013 84353 - 219PF03824NicOHigh-affinity nickel-transport protein1.60E-04
WP_049905042.1 85270 85081 - 62NO PFAM MATCH---
WP_115804987.1 85359 85845 + 161PF03745DUF309Domain of unknown function (DUF309)1.60E-15
WP_004974426.1 85965 86826 + 286PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.90E-11

Results for WP_004793801.1 [Acinetobacter oleivorans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_081399546.1 326621 327314 + 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
7.00E-11
7.40E-11
WP_004793812.1 328302 327357 - 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
4.80E-12
5.10E-06
WP_004793810.1 329391 328314 - 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
6.30E-54
6.80E-19
1.30E-05
WP_004793809.1 330811 329623 - 395PF03573OprDouter membrane porin, OprD family3.60E-34
WP_081399666.1 331777 330823 - 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.70E-67
WP_004793806.1 333488 331802 - 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
9.00E-77
4.90E-06
2.70E-05
WP_004793804.1 333861 335208 + 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
4.10E-46
3.10E-24
7.70E-09
WP_004793803.1 335239 336520 + 426PF03573OprDouter membrane porin, OprD family5.00E-106
WP_004793801.1 336772 338971 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.40E-75
3.50E-73
1.50E-08
WP_004793799.1 340701 339036 - 554PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
2.50E-17
1.80E-09
2.50E-05
5.60E-05
WP_004793797.1 341622 340728 - 297PF07859
PF10340
PF20434
PF00326
PF01738
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
DLH
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Dienelactone hydrolase family
3.70E-56
2.10E-11
4.20E-10
1.60E-06
2.90E-04
WP_004793795.1 342547 341692 - 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
9.30E-51
9.50E-37
1.50E-11
WP_004793793.1 344079 342591 - 495PF00743
PF13738
PF13450
PF07992
PF13434
FMO-like
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.40E-20
6.90E-17
2.80E-11
5.70E-11
5.30E-09
WP_034596331.1 344215 345229 + 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
6.70E-34
2.90E-14
1.30E-04
WP_004793790.1 346115 345239 - 291PF04072LCMLeucine carboxyl methyltransferase9.50E-38
WP_004793788.1 347752 346228 - 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
3.60E-17
1.30E-14
7.70E-14
4.00E-10
4.10E-07
WP_004793787.1 348608 347774 - 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.70E-48
1.50E-41
2.90E-13

Results for WP_035342243.1 [Dickeya aquatica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_035342263.1 2093367 2092758 - 202PF02798
PF13417
PF13409
PF17172
PF00043
GST_N
GST_N_3
GST_N_2
GST_N_4
GST_C
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase N-terminal domain
Glutathione S-transferase, C-terminal domain
6.30E-16
9.00E-13
2.90E-09
1.80E-04
6.50E-04
WP_035342260.1 2094165 2093520 - 214PF01323DSBADSBA-like thioredoxin domain1.20E-05
WP_067486982.1 2095328 2094452 - 291PF00753
PF19583
Lactamase_B
ODP
Metallo-beta-lactamase superfamily
ODP family beta lactamase
1.90E-06
3.70E-04
WP_035346031.1 2095429 2096338 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.60E-42
4.80E-15
WP_067486979.1 2096474 2097626 + 383PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.60E-23
1.50E-06
1.10E-04
WP_035342252.1 2098471 2097730 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.70E-30
7.40E-19
3.70E-06
WP_035342249.1 2101025 2098742 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.80E-206
3.30E-43
WP_035342246.1 2101938 2101080 - 285PF01226Form_Nir_transFormate/nitrite transporter4.30E-74
WP_035342243.1 2104124 2102360 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-81
7.40E-68
WP_035342241.1 2104394 2105480 + 361PF00266Aminotran_5Aminotransferase class-V8.90E-62
WP_067486975.1 2105581 2106871 + 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-148
WP_067486971.1 2107047 2107734 + 228PF02224
PF13189
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
9.50E-81
3.50E-07
2.60E-05
WP_071604078.1 2107802 2109512 + 569PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.90E-98
3.40E-12
2.20E-06
WP_035342236.1 2109610 2109895 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
9.30E-29
1.10E-06
WP_035342234.1 2110912 2110297 - 204PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
3.70E-32
3.80E-15
WP_035342232.1 2111682 2110905 - 258PF00977
PF03060
PF01207
PF05690
His_biosynth
NMO
Dus
ThiG
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
Thiazole biosynthesis protein ThiG
6.40E-76
3.90E-07
2.50E-06
3.50E-05
WP_035342230.1 2112401 2111663 - 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
3.80E-77
4.30E-07
5.10E-07
2.90E-06
8.20E-05

Results for WP_024522347.1 [Edwardsiella hoshinae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024522339.1 2986817 2985062 - 584PF00664
PF00005
PF02463
PF06414
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
Zeta toxin
1.60E-57
8.20E-34
1.40E-10
1.10E-04
WP_232238231.1 2989169 2986853 - 771PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.60E-55
4.20E-14
3.20E-08
WP_024522341.1 2989867 2989582 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-29
7.00E-07
WP_024522342.1 2991626 2989955 - 556PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-99
2.00E-12
9.40E-07
WP_024522343.1 2992528 2991850 - 225PF02224
PF13189
PF13207
PF13238
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_18
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.10E-79
4.40E-07
3.60E-05
7.80E-05
1.40E-04
WP_024522344.1 2994104 2992817 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.80E-145
WP_024522345.1 2995368 2994276 - 363PF00266Aminotran_5Aminotransferase class-V4.50E-62
WP_024522346.1 2996707 2995660 - 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
3.10E-64
2.90E-26
WP_024522347.1 2996850 2998611 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.60E-80
4.90E-66
WP_035370173.1 2999008 2999866 + 285PF01226Form_Nir_transFormate/nitrite transporter5.80E-74
WP_024522349.1 2999928 3002211 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.50E-207
1.60E-43
WP_024522350.1 3002487 3003228 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.10E-30
1.70E-18
1.50E-05
WP_024522351.1 3003945 3003333 - 203PF00440
PF13977
TetR_N
TetR_C_6
Bacterial regulatory proteins, tetR family
BetI-type transcriptional repressor, C-terminal
1.60E-12
8.50E-04
WP_024522352.1 3004046 3004508 + 153PF04224DUF417Protein of unknown function, DUF4173.20E-31
WP_232238232.1 3004507 3004834 + 108PF13899
PF00085
PF00578
Thioredoxin_7
Thioredoxin
AhpC-TSA
Thioredoxin-like
Thioredoxin
AhpC/TSA family
1.10E-06
1.80E-04
3.30E-04
WP_024522353.1 3005029 3005296 + 88PF07338YdgH_BhsA-likeYdgH/BhsA/McbA-like domain1.60E-10
WP_024522354.1 3005695 3006148 + 150PF00359PTS_EIIA_2Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 24.50E-05

Results for WP_007707461.1 [Cronobacter universalis NCTC 9529] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038857588.1 1516908 1521039 + 1376PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
1.10E-74
4.10E-42
3.20E-28
6.00E-28
7.00E-05
WP_007707449.1 1521228 1521843 + 204PF03548LolAOuter membrane lipoprotein carrier protein LolA1.10E-58
WP_007707450.1 1521855 1523199 + 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
3.30E-65
4.00E-23
1.10E-16
7.30E-14
1.00E-06
WP_007707452.1 1523295 1524588 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.70E-37
1.60E-33
WP_007707453.1 1524885 1526034 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
1.50E-29
3.90E-10
3.80E-05
WP_007707455.1 1526808 1526067 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-32
8.20E-19
2.90E-06
WP_007707457.1 1529286 1527003 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.00E-208
5.30E-44
WP_032804456.1 1530195 1529337 - 285PF01226Form_Nir_transFormate/nitrite transporter4.40E-75
WP_007707461.1 1532362 1530598 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.90E-84
3.40E-68
WP_032805300.1 1532503 1533196 + 230PF04239DUF421Protein of unknown function (DUF421)4.10E-16
WP_007707471.1 1533358 1534444 + 361PF00266Aminotran_5Aminotransferase class-V1.50E-70
WP_007707474.1 1534512 1535799 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-151
WP_007707476.1 1535942 1536710 + 255PF01435Peptidase_M48Peptidase family M481.70E-28
WP_007707479.1 1536884 1537571 + 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
1.40E-84
9.80E-08
8.00E-05
2.20E-04
6.30E-04
WP_007707482.1 1537682 1539356 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.30E-99
2.70E-12
2.60E-07
WP_004387353.1 1539470 1539755 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_038857585.1 1539959 1542218 + 752PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
9.70E-52
1.20E-17
2.30E-11

Results for WP_001330029.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016234720.1 36162 36900 + 245PF00563EALEAL domain3.40E-63
WP_016234719.1 36904 38245 + 446PF17156
PF00990
GAPES2
GGDEF
Gammaproteobacterial periplasmic sensor domain
Diguanylate cyclase, GGDEF domain
6.40E-40
3.50E-22
WP_024194943.1 38318 40433 + 704PF00535
PF13641
PF13632
PF03552
PF13506
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Cellulose_synt
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Cellulose synthase
Glycosyl transferase family 21
1.60E-35
3.10E-20
2.40E-19
1.30E-16
9.00E-11
WP_250186908.1 40592 42800 + 735PF03170BcsBBacterial cellulose synthase subunit2.10E-204
WP_016234716.1 42904 46012 + 1035PF05420
PF14559
PF07719
PF13424
PF13428
BCSC_C
TPR_19
TPR_2
TPR_12
TPR_14
Cellulose synthase operon protein C C-terminus (BCSC_C)
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.30E-112
2.50E-22
1.30E-14
1.40E-12
4.20E-11
WP_000111043.1 46899 46158 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292820.1 49373 47090 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
6.30E-209
1.60E-43
WP_000642546.1 50285 49427 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001330029.1 52451 50690 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.60E-83
8.30E-67
WP_000642852.1 52580 53273 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057143.1 53471 54560 + 362PF00266Aminotran_5Aminotransferase class-V1.70E-76
WP_000445216.1 54630 55914 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.10E-151

Results for WP_060815242.1 [Enterococcus gallinarum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_060815235.1 44335 43750 - 194PF00239
PF02796
PF08279
PF13551
PF13384
Resolvase
HTH_7
HTH_11
HTH_29
HTH_23
Resolvase, N terminal domain
Helix-turn-helix domain of resolvase
HTH domain
Winged helix-turn helix
Homeodomain-like domain
3.20E-44
1.40E-15
3.50E-06
2.60E-05
3.90E-05
WP_060815236.1 44581 45352 + 256PF00455
PF08220
DeoRC
HTH_DeoR
DeoR C terminal sensor domain
DeoR-like helix-turn-helix domain
1.40E-37
3.00E-12
WP_060815237.1 45344 45977 + 210PF13419
PF00702
PF12710
PF08282
PF13242
HAD_2
Hydrolase
HAD
Hydrolase_3
Hydrolase_like
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
4.10E-46
1.60E-22
7.80E-08
1.30E-06
7.50E-05
WP_060815238.1 46363 46732 + 122PF03965Penicillinase_RPenicillinase repressor3.90E-05
WP_115262347.1 47081 47315 + 77NO PFAM MATCH---
WP_060815239.1 47404 48247 + 280NO PFAM MATCH---
WP_060815240.1 48239 48863 + 207NO PFAM MATCH---
WP_060815241.1 48864 49821 + 318PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.30E-05
WP_060815242.1 49835 50870 + 344PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-12
WP_060815244.1 51575 52169 + 197PF00005
PF02463
PF13304
PF13476
ABC_tran
SMC_N
AAA_21
AAA_23
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
1.90E-12
5.50E-11
2.30E-10
5.60E-04
WP_002367722.1 52301 52907 + 202INFERRED GENE---
WP_060815245.1 53142 53394 + 83PF02604
PF12910
PhdYeFM_antitox
PHD_like
Antitoxin Phd_YefM, type II toxin-antitoxin system
Antitoxin of toxin-antitoxin, RelE / RelB, TA system
2.80E-09
6.20E-04
WP_003513861.1 53516 53667 + 50INFERRED GENE---
WP_060815246.1 55332 53874 - 485PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
5.00E-58
2.20E-10
1.30E-08
WP_060815247.1 56470 55654 - 271PF03613EIID-AGAPTS system mannose/fructose/sorbose family IID component2.60E-77
WP_060815248.1 57269 56456 - 270PF03609EII-SorPTS system sorbose-specific iic component4.80E-68
WP_115262348.1 59038 57331 - 568PF13229Beta_helixRight handed beta helix region9.40E-07

Results for WP_001346414.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_044720641.1 18935 16670 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.70E-51
6.50E-20
9.70E-06
WP_000167336.1 19425 19140 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 21258 19584 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 22052 21368 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_180500748.1 22989 22224 - 254PF01435Peptidase_M48Peptidase family M482.10E-24
WP_180500750.1 24442 23158 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-150
WP_000057159.1 25601 24512 - 362PF00266Aminotran_5Aminotransferase class-V8.50E-76
WP_024242306.1 26492 25799 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_001346414.1 26621 28382 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.60E-83
6.80E-67
WP_214677798.1 28829 29645 + 271PF01226Form_Nir_transFormate/nitrite transporter1.20E-74
WP_001292822.1 29699 31982 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.70E-209
1.60E-43
WP_000111043.1 32173 32914 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_000109295.1 34159 33010 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.90E-27
4.00E-10
1.00E-06
WP_096884632.1 34472 35099 + 208PF00857IsochorismataseIsochorismatase family7.40E-22
WP_032329803.1 35998 35134 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.90E-121
WP_000213098.1 36617 35999 - 205PF13247
PF12797
PF00037
PF13187
PF12837
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_6
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
1.90E-29
6.90E-13
8.80E-13
3.80E-12
2.70E-11
WP_180500756.1 39072 36627 - 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.10E-112
3.40E-29
4.30E-18

Results for WP_032264357.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000165880.1 58861 58234 - 208PF00857IsochorismataseIsochorismatase family7.10E-22
WP_260837809.1 59174 60323 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.20E-26
4.00E-10
1.50E-06
WP_000918536.1 60532 61963 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
3.80E-28
1.40E-12
WP_001242675.1 62872 61963 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.30E-33
1.20E-19
WP_001190363.1 62971 63562 + 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
2.70E-39
3.70E-12
WP_000111043.1 64384 63643 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292812.1 66858 64575 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000642546.1 67770 66912 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_032264357.1 69936 68175 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-83
6.70E-67
WP_000642849.1 70064 70757 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 70955 72044 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000445231.1 72114 73398 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_032264355.1 73566 74331 + 254PF01435Peptidase_M48Peptidase family M483.20E-26
WP_000125016.1 74503 75187 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 75297 76971 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 77130 77415 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_260837810.1 77621 79886 + 754PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
6.80E-52
3.80E-19

Results for WP_018345881.1 [Gallibacterium anatis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018345887.1 613700 614579 + 292PF00005
PF13304
PF13555
PF02463
ABC_tran
AAA_21
AAA_29
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RecF/RecN/SMC N terminal domain
4.60E-30
2.60E-10
2.80E-07
5.40E-07
WP_018345886.1 614580 615432 + 283PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
4.20E-88
1.70E-07
WP_018345885.1 615441 616281 + 279PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
3.40E-85
8.50E-07
WP_018345884.1 616550 616277 - 90PF00708AcylphosphataseAcylphosphatase2.90E-27
WP_018345883.1 616642 617302 + 219PF09829DUF2057Uncharacterized protein conserved in bacteria (DUF2057)5.30E-56
WP_013745106.1 617381 617840 + 152PF02142MGSMGS-like domain4.40E-19
WP_013745105.1 617843 618278 + 144PF03733YccFInner membrane component domain2.50E-29
WP_018345882.1 618289 620473 + 727PF12805
PF13515
PF04632
FUSC-like
FUSC_2
FUSC
FUSC-like inner membrane protein yccS
Fusaric acid resistance protein-like
Fusaric acid resistance protein family
2.40E-90
3.00E-22
1.10E-07
WP_018345881.1 622267 620509 - 585PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.50E-82
3.70E-64
WP_018345880.1 623331 622440 - 296PF01370
PF08338
PF16363
PF04321
PF07993
Epimerase
DUF1731
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_4
NAD dependent epimerase/dehydratase family
Domain of unknown function (DUF1731)
GDP-mannose 4,6 dehydratase
RmlD substrate binding domain
Male sterility protein
1.40E-19
3.90E-18
1.80E-11
5.00E-06
9.50E-05
WP_031205037.1 623816 623351 - 154PF02863
PF01316
Arg_repressor_C
Arg_repressor
Arginine repressor, C-terminal domain
Arginine repressor, DNA binding domain
3.60E-23
1.80E-22
WP_018345879.1 624048 624981 + 310PF02866
PF00056
Ldh_1_C
Ldh_1_N
lactate/malate dehydrogenase, alpha/beta C-terminal domain
lactate/malate dehydrogenase, NAD binding domain
1.50E-50
5.80E-46
WP_013745095.1 625144 626161 + 338PF01063Aminotran_4Amino-transferase class IV1.60E-37
WP_018345878.1 626248 626977 + 242PF13649
PF08241
PF13847
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
7.70E-15
1.50E-11
3.10E-11
1.30E-09
9.30E-09
WP_018345877.1 627070 628840 + 589PF00152
PF02938
PF01336
PF01409
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA synthetases class II (D, K and N)
GAD domain
OB-fold nucleic acid binding domain
tRNA synthetases class II core domain (F)
1.70E-105
2.20E-31
8.80E-17
7.30E-04
WP_018345876.1 628853 629747 + 297PF13739
PF11738
PdaC
DUF3298
Deacetylase PdaC
Protein of unknown function (DUF3298)
3.00E-05
3.40E-04
WP_018345875.1 629750 630203 + 150PF00293NUDIXNUDIX domain1.20E-19

Results for WP_017806523.1 [Avibacterium paragallinarum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021724337.1 2316 1218 - 365PF03739LptF_LptGLipopolysaccharide export system permease LptF/LptG3.30E-65
WP_021724338.1 2425 3910 + 494PF00883
PF02789
Peptidase_M17
Peptidase_M17_N
Cytosol aminopeptidase family, catalytic domain
Cytosol aminopeptidase family, N-terminal domain
2.10E-120
9.20E-34
EC523_RS14245 3989 5406 + 472INFERRED GENE---
WP_017806528.1 6094 5521 - 190PF07715PlugTonB-dependent Receptor Plug Domain5.40E-17
WP_162197011.1 6238 6751 + 170PF03929
PF16357
PepSY_TM
PepSY_TM_like_2
PepSY-associated TM region
Putative PepSY_TM-like
1.70E-08
2.40E-08
WP_017806526.1 8098 6793 - 434PF05201
PF01488
PF00745
PF03435
GlutR_N
Shikimate_DH
GlutR_dimer
Sacchrp_dh_NADP
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
Saccharopine dehydrogenase NADP binding domain
1.90E-50
6.10E-47
8.80E-21
1.80E-04
WP_017806525.1 8947 8245 - 233PF16123
PF00753
PF12706
PF16661
HAGH_C
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily domain
7.90E-16
1.10E-15
2.40E-07
1.70E-06
WP_017806524.1 8964 9696 + 243PF08241
PF01209
PF13649
Methyltransf_11
Ubie_methyltran
Methyltransf_25
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
3.20E-09
8.40E-06
2.20E-05
WP_017806523.1 9802 11572 + 589PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-79
2.00E-67
WP_017806522.1 11660 12083 + 140PF06295
PF14316
DUF1043
DUF4381
Protein of unknown function (DUF1043)
Domain of unknown function (DUF4381)
6.50E-43
3.40E-04
WP_017806521.1 12244 13375 + 376PF00268Ribonuc_red_smRibonucleotide reductase, small chain3.70E-48
WP_017806520.1 13742 13415 - 108PF01381
PF12844
HTH_3
HTH_19
Helix-turn-helix
Helix-turn-helix domain
4.60E-07
7.10E-07
WP_017806519.1 15049 13741 - 435PF07804HipA_CHipA-like C-terminal domain4.70E-26
WP_017806518.1 15397 15148 - 82PF00111Fer22Fe-2S iron-sulfur cluster binding domain6.50E-10
WP_103846582.1 17201 16388 - 270PF05173
PF01113
DapB_C
DapB_N
Dihydrodipicolinate reductase, C-terminus
Dihydrodipicolinate reductase, N-terminus
3.10E-43
3.70E-43
WP_017806514.1 17851 17215 - 211PF01810
PF03741
LysE
TerC
LysE type translocator
Integral membrane protein TerC family
3.30E-42
4.80E-05
WP_017806513.1 18363 17862 - 166PF04608PgpAPhosphatidylglycerophosphatase A7.00E-39

Results for WP_058393348.1 [Legionella pneumophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_269568811.1 596 0 - 198PF06586TraKTraK protein2.30E-23
WP_021460417.1 1149 588 - 186PF05309TraETraE protein1.90E-30
WP_042238380.1 1444 1153 - 96PF07178TraLTraL protein3.10E-05
WP_058393352.1 1755 1443 - 103PF05513TraATraA8.20E-09
WP_058478472.1 2233 1861 - 123NO PFAM MATCH---
WP_058393350.1 2454 2268 - 61NO PFAM MATCH---
WP_058478471.1 3602 2567 - 344PF07812TfuATfuA-like protein1.00E-34
WP_058393348.1 4656 3594 - 353PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-36
WP_058393347.1 5675 4652 - 340PF00899ThiFThiF family1.60E-49
WP_058393346.1 5931 5679 - 83PF02597ThiSThiS family1.60E-06
WP_010948192.1 6002 7907 + 635INFERRED GENE---
WP_011947405.1 8223 7986 - 78NO PFAM MATCH---
WP_011947404.1 8942 8258 - 227PF04002
PF20582
RadC
UPF0758_N
RadC-like JAB domain
UPF0758 N-terminal
4.70E-40
3.00E-18
WP_013101834.1 9018 10215 + 398PF04127
PF02441
DFP
Flavoprotein
DNA / pantothenate metabolism flavoprotein
Flavoprotein
1.80E-70
1.50E-45
WP_011947402.1 10241 10700 + 152PF00692dUTPasedUTPase1.10E-39
WP_013101833.1 10700 12089 + 462PF02878
PF02879
PF02880
PF00408
PGM_PMM_I
PGM_PMM_II
PGM_PMM_III
PGM_PMM_IV
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Phosphoglucomutase/phosphomannomutase, C-terminal domain
8.20E-34
3.60E-28
2.20E-20
8.70E-10

Results for WP_034789178.1 [Ewingella americana] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_034789149.1 597502 598120 + 205PF13247
PF00037
PF12797
PF13187
PF12838
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.20E-27
6.10E-13
9.60E-13
1.20E-12
5.80E-12
WP_034789152.1 598121 598979 + 285PF04976DmsCDMSO reductase anchor subunit (DmsC)2.20E-101
WP_034789155.1 599033 599642 + 202PF02613Nitrate_red_delNitrate reductase delta subunit3.80E-26
WP_034789158.1 599641 600202 + 186PF00037
PF13187
PF12838
PF14697
PF12837
Fer4
Fer4_9
Fer4_7
Fer4_21
Fer4_6
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
1.20E-16
6.60E-13
9.60E-13
1.50E-09
1.60E-09
WP_034789163.1 600341 601487 + 381PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
1.00E-32
1.80E-08
5.50E-06
5.60E-06
WP_034789169.1 602301 601560 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.40E-29
2.10E-18
3.80E-06
WP_034789172.1 604895 602612 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.50E-207
2.30E-43
WP_034789176.1 605828 604970 - 285PF01226Form_Nir_transFormate/nitrite transporter1.20E-74
WP_034789178.1 608083 606319 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.70E-82
1.60E-65
WP_034789181.1 608367 609453 + 361PF00266Aminotran_5Aminotransferase class-V1.60E-68
WP_034789184.1 609547 610831 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.30E-149
WP_034789187.1 611046 611745 + 232PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.60E-82
2.00E-07
3.10E-06
5.00E-05
WP_100935605.1 611903 613577 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.80E-99
9.00E-12
4.50E-07
WP_034789191.1 613640 613925 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
9.20E-28
3.20E-07
WP_072009866.1 614168 616430 + 753PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.30E-51
4.40E-16
1.40E-06
WP_034789194.1 616468 618217 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
3.50E-59
2.70E-34
6.40E-10
1.90E-05
8.60E-04
WP_034789197.1 618213 619197 + 327PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase9.60E-116

Results for WP_016176860.1 [Enterococcus durans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001196543.1 16311 16587 + 91NO PFAM MATCH---
WP_001015311.1 16799 17480 + 226PF13610
PF00665
PF03050
DDE_Tnp_IS240
rve
DDE_Tnp_IS66
DDE domain
Integrase core domain
Transposase IS66 family
1.00E-43
9.60E-11
2.50E-06
WP_016176866.1 17764 17914 + 49NO PFAM MATCH---
WP_016176865.1 17967 18858 + 296PF00005
PF02463
PF13304
PF13555
PF00004
ABC_tran
SMC_N
AAA_21
AAA_29
AAA
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
ATPase family associated with various cellular activities (AAA)
3.90E-19
8.50E-10
3.10E-05
6.50E-04
7.60E-04
WP_016176864.1 18857 19601 + 247PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
4.00E-14
9.20E-05
WP_016176863.1 19626 19944 + 105PF19388DUF5963Family of unknown function (DUF5963)5.60E-31
WP_016176862.1 19940 20816 + 291PF00881NitroreductaseNitroreductase family2.70E-13
WP_016176861.1 20821 21739 + 305NO PFAM MATCH---
WP_016176860.1 21731 23045 + 437PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-29
WP_025481346.1 23037 23625 + 195PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.70E-07
WP_060789893.1 24892 23923 - 322PF00589Phage_integrasePhage integrase family8.00E-15
WP_002338419.1 25015 25873 + 286INFERRED GENE---
WP_001015311.1 25945 26626 + 226PF13610
PF00665
PF03050
DDE_Tnp_IS240
rve
DDE_Tnp_IS66
DDE domain
Integrase core domain
Transposase IS66 family
1.00E-43
9.60E-11
2.50E-06

Results for WP_025800962.1 [Hafnia alvei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_227659781.1 83991 81723 - 755PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
6.90E-45
3.60E-15
2.30E-11
WP_004095742.1 84526 84241 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.20E-28
2.20E-07
WP_025800968.1 86288 84611 - 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.10E-98
7.10E-11
8.70E-07
WP_025800967.1 87199 86509 - 229PF02224
PF13189
PF13238
PF13671
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_33
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.50E-82
1.10E-06
1.40E-06
2.50E-04
3.00E-04
WP_025800966.1 88828 87547 - 426PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.50E-148
WP_025800965.1 90070 88981 - 362PF00266Aminotran_5Aminotransferase class-V2.50E-69
WP_025800964.1 91048 90355 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_025800963.1 92187 91140 - 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.50E-63
3.10E-26
WP_025800962.1 92330 94091 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.60E-83
2.40E-68
WP_025800961.1 94609 95467 + 285PF01226Form_Nir_transFormate/nitrite transporter5.20E-74
WP_025800960.1 95528 97811 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
6.60E-207
1.50E-43

Results for WP_004860065.1 back to top

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Couldn't process WP_004860065.1 Genbank filestream. May be corrupt.

Results for WP_046387756.1 [Klebsiella pneumoniae subsp. rhinoscleromatis SB3432] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004141793.1 3726932 3725183 - 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
1.70E-59
1.50E-36
1.10E-09
6.00E-06
5.20E-05
WP_032451715.1 3729233 3726968 - 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
4.60E-51
2.10E-18
1.90E-04
7.50E-04
WP_002898165.1 3729726 3729438 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.20E-08
9.40E-05
WP_002898162.1 3731551 3729877 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.00E-98
5.10E-12
2.70E-06
WP_002898160.1 3732368 3731684 - 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
5.70E-83
5.10E-08
WP_004141802.1 3733826 3732542 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.10E-151
WP_002898155.1 3734988 3733899 - 362PF00266Aminotran_5Aminotransferase class-V4.00E-70
WP_004141812.1 3735869 3735176 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_046387756.1 3735984 3737745 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-83
1.40E-67
WP_004141816.1 3738130 3738988 + 285PF01226Form_Nir_transFormate/nitrite transporter5.00E-74
WP_004141818.1 3739039 3741322 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.20E-207
1.60E-43
WP_004141820.1 3741513 3742254 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4.50E-32
1.60E-18
1.90E-06
WP_004141822.1 3743565 3742416 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.20E-26
1.30E-08
2.00E-07
2.50E-04
WP_020947986.1 3744703 3743839 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)4.80E-113
WP_004150845.1 3745322 3744704 - 205PF13247
PF12797
PF13187
PF00037
PF12838
Fer4_11
Fer4_2
Fer4_9
Fer4
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
5.10E-28
3.40E-13
3.30E-12
4.60E-12
1.90E-11
WP_020947987.1 3747771 3745332 - 812PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
3.20E-108
1.40E-28
3.50E-18
WP_004141828.1 3749264 3747971 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.80E-36
2.50E-33

Results for WP_004147805.1 back to top

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Couldn't process WP_004147805.1 Genbank filestream. May be corrupt.

Results for WP_058525094.1 [Legionella birminghamensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058525101.1 6041 6698 + 218PF00483
PF12804
NTP_transferase
NTP_transf_3
Nucleotidyl transferase
MobA-like NTP transferase domain
8.30E-18
1.60E-12
WP_058525100.1 7591 6823 - 255NO PFAM MATCH---
WP_058525099.1 10179 7740 - 812PF09317
PF02771
PF02770
PF00441
ACDH_C
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA dehydrogenase, C-terminal, bacterial type
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
1.60E-89
2.20E-17
1.20E-12
3.90E-11
WP_058525098.1 10312 10942 + 209NO PFAM MATCH---
WP_058525097.1 10934 11471 + 178PF02417Chromate_transpChromate transporter3.80E-27
WP_115317103.1 11507 13595 + 695PF17941
PF02503
PF13090
PF13089
PF13091
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Polyphosphate kinase C-terminal domain 1
Polyphosphate kinase middle domain
Polyphosphate kinase C-terminal domain 2
Polyphosphate kinase N-terminal domain
PLD-like domain
9.40E-72
2.90E-62
4.50E-62
3.10E-33
1.40E-11
WP_157062417.1 13710 13884 + 57NO PFAM MATCH---
WP_058525095.1 13941 15174 + 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-35
WP_058525094.1 15163 16402 + 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-36
WP_058525093.1 16591 17455 + 287PF00126
PF03466
PF13404
HTH_1
LysR_substrate
HTH_AsnC-type
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
AsnC-type helix-turn-helix domain
2.90E-18
2.30E-16
9.20E-04
WP_058525092.1 18527 17546 - 326PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-06
2.20E-06
2.50E-05
WP_058525091.1 18596 19166 + 189PF08207
PF09285
PF01132
EFP_N
Elong-fact-P_C
EFP
Elongation factor P (EF-P) KOW-like domain
Elongation factor P, C-terminal
Elongation factor P (EF-P) OB domain
1.00E-26
1.90E-25
7.90E-23
WP_058525090.1 19735 21697 + 653NO PFAM MATCH---
WP_131793054.1 21939 23658 + 572NO PFAM MATCH---
WP_058525088.1 24344 24026 - 105PF00893
PF00892
Multi_Drug_Res
EamA
Small Multidrug Resistance protein
EamA-like transporter family
6.00E-29
6.90E-04

Results for WP_058525095.1 [Legionella birminghamensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058525102.1 5076 6045 + 322PF01636
PF02958
PF07914
APH
EcKL
DUF1679
Phosphotransferase enzyme family
Ecdysteroid kinase-like family
Uncharacterized oxidoreductase dhs-27
4.10E-31
9.90E-06
8.60E-04
WP_058525101.1 6041 6698 + 218PF00483
PF12804
NTP_transferase
NTP_transf_3
Nucleotidyl transferase
MobA-like NTP transferase domain
8.30E-18
1.60E-12
WP_058525100.1 7591 6823 - 255NO PFAM MATCH---
WP_058525099.1 10179 7740 - 812PF09317
PF02771
PF02770
PF00441
ACDH_C
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA dehydrogenase, C-terminal, bacterial type
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
1.60E-89
2.20E-17
1.20E-12
3.90E-11
WP_058525098.1 10312 10942 + 209NO PFAM MATCH---
WP_058525097.1 10934 11471 + 178PF02417Chromate_transpChromate transporter3.80E-27
WP_115317103.1 11507 13595 + 695PF17941
PF02503
PF13090
PF13089
PF13091
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Polyphosphate kinase C-terminal domain 1
Polyphosphate kinase middle domain
Polyphosphate kinase C-terminal domain 2
Polyphosphate kinase N-terminal domain
PLD-like domain
9.40E-72
2.90E-62
4.50E-62
3.10E-33
1.40E-11
WP_157062417.1 13710 13884 + 57NO PFAM MATCH---
WP_058525095.1 13941 15174 + 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-35
WP_058525094.1 15163 16402 + 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-36
WP_058525093.1 16591 17455 + 287PF00126
PF03466
PF13404
HTH_1
LysR_substrate
HTH_AsnC-type
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
AsnC-type helix-turn-helix domain
2.90E-18
2.30E-16
9.20E-04
WP_058525092.1 18527 17546 - 326PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-06
2.20E-06
2.50E-05
WP_058525091.1 18596 19166 + 189PF08207
PF09285
PF01132
EFP_N
Elong-fact-P_C
EFP
Elongation factor P (EF-P) KOW-like domain
Elongation factor P, C-terminal
Elongation factor P (EF-P) OB domain
1.00E-26
1.90E-25
7.90E-23
WP_058525090.1 19735 21697 + 653NO PFAM MATCH---
WP_131793054.1 21939 23658 + 572NO PFAM MATCH---
WP_058525088.1 24344 24026 - 105PF00893
PF00892
Multi_Drug_Res
EamA
Small Multidrug Resistance protein
EamA-like transporter family
6.00E-29
6.90E-04

Results for WP_058463334.1 [Legionella cincinnatiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_162263039.1 124147 122899 - 415NO PFAM MATCH---
WP_238589407.1 125462 124481 - 326NO PFAM MATCH---
WP_058463338.1 125728 126025 + 98PF01022
PF12840
PF12802
HTH_5
HTH_20
MarR_2
Bacterial regulatory protein, arsR family
Helix-turn-helix domain
MarR family
1.10E-09
9.10E-06
9.50E-04
WP_058463337.1 126026 126326 + 99PF13240
PF12773
PF13248
PF17032
zinc_ribbon_2
DZR
zf-ribbon_3
zinc_ribbon_15
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
zinc-ribbon family
3.00E-10
3.20E-09
3.30E-05
3.80E-04
WP_165481786.1 126597 126768 + 56NO PFAM MATCH---
WP_238589406.1 127316 129119 + 600PF00005
PF00664
PF02463
PF07728
ABC_tran
ABC_membrane
SMC_N
AAA_5
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain (dynein-related subfamily)
1.10E-31
1.90E-12
2.10E-09
6.40E-04
WP_058463336.1 130055 129191 - 287PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
9.80E-18
1.60E-13
WP_058463335.1 131358 130104 - 417PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.20E-43
WP_058463334.1 132613 131341 - 423PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.60E-31
WP_157061438.1 132794 132644 - 49NO PFAM MATCH---
WP_058463333.1 134208 133158 - 349PF00487FA_desaturaseFatty acid desaturase5.00E-26
WP_058463332.1 135186 134466 - 239PF13545
PF00027
PF00325
HTH_Crp_2
cNMP_binding
Crp
Crp-like helix-turn-helix domain
Cyclic nucleotide-binding domain
Bacterial regulatory proteins, crp family
7.60E-15
9.60E-13
1.90E-12
WP_238589405.1 136850 135299 - 516NO PFAM MATCH---
WP_058463331.1 137148 137745 + 198PF13561
PF00106
PF08659
PF01370
PF04321
adh_short_C2
adh_short
KR
Epimerase
RmlD_sub_bind
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
RmlD substrate binding domain
1.90E-10
5.00E-07
2.80E-05
9.00E-05
6.00E-04
WP_058463330.1 138827 138497 - 109PF04993TfoX_NTfoX N-terminal domain2.10E-14
WP_058463329.1 140304 139296 - 335PF02873
PF01565
MurB_C
FAD_binding_4
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
FAD binding domain
3.60E-28
8.70E-18

Results for WP_058463335.1 [Legionella cincinnatiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058463341.1 119649 122799 + 1049NO PFAM MATCH---
WP_162263039.1 124147 122899 - 415NO PFAM MATCH---
WP_238589407.1 125462 124481 - 326NO PFAM MATCH---
WP_058463338.1 125728 126025 + 98PF01022
PF12840
PF12802
HTH_5
HTH_20
MarR_2
Bacterial regulatory protein, arsR family
Helix-turn-helix domain
MarR family
1.10E-09
9.10E-06
9.50E-04
WP_058463337.1 126026 126326 + 99PF13240
PF12773
PF13248
PF17032
zinc_ribbon_2
DZR
zf-ribbon_3
zinc_ribbon_15
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
zinc-ribbon family
3.00E-10
3.20E-09
3.30E-05
3.80E-04
WP_165481786.1 126597 126768 + 56NO PFAM MATCH---
WP_238589406.1 127316 129119 + 600PF00005
PF00664
PF02463
PF07728
ABC_tran
ABC_membrane
SMC_N
AAA_5
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain (dynein-related subfamily)
1.10E-31
1.90E-12
2.10E-09
6.40E-04
WP_058463336.1 130055 129191 - 287PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
9.80E-18
1.60E-13
WP_058463335.1 131358 130104 - 417PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.20E-43
WP_058463334.1 132613 131341 - 423PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.60E-31
WP_157061438.1 132794 132644 - 49NO PFAM MATCH---
WP_058463333.1 134208 133158 - 349PF00487FA_desaturaseFatty acid desaturase5.00E-26
WP_058463332.1 135186 134466 - 239PF13545
PF00027
PF00325
HTH_Crp_2
cNMP_binding
Crp
Crp-like helix-turn-helix domain
Cyclic nucleotide-binding domain
Bacterial regulatory proteins, crp family
7.60E-15
9.60E-13
1.90E-12
WP_238589405.1 136850 135299 - 516NO PFAM MATCH---
WP_058463331.1 137148 137745 + 198PF13561
PF00106
PF08659
PF01370
PF04321
adh_short_C2
adh_short
KR
Epimerase
RmlD_sub_bind
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
RmlD substrate binding domain
1.90E-10
5.00E-07
2.80E-05
9.00E-05
6.00E-04
WP_058463330.1 138827 138497 - 109PF04993TfoX_NTfoX N-terminal domain2.10E-14
WP_058463329.1 140304 139296 - 335PF02873
PF01565
MurB_C
FAD_binding_4
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
FAD binding domain
3.60E-28
8.70E-18

Results for WP_058523522.1 [Legionella quinlivanii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_265663787.1 10639 9499 - 379PF01978TrmBSugar-specific transcriptional regulator TrmB5.50E-04
WP_058523529.1 11184 12132 + 315PF13614
PF01656
PF09140
PF10609
PF02374
AAA_31
CbiA
MipZ
ParA
ArsA_ATPase
AAA domain
CobQ/CobB/MinD/ParA nucleotide binding domain
ATPase MipZ
NUBPL iron-transfer P-loop NTPase
Anion-transporting ATPase
7.20E-29
6.40E-13
2.30E-08
5.20E-07
1.10E-05
WP_058523528.1 12094 13189 + 364PF02195ParBcParB/Sulfiredoxin domain1.50E-05
WP_058523527.1 13271 13742 + 156NO PFAM MATCH---
WP_058523526.1 14860 13846 - 337PF00899ThiFThiF family1.90E-48
WP_265663788.1 14965 16360 + 464NO PFAM MATCH---
WP_058523524.1 16356 17538 + 393PF13535ATP-grasp_4ATP-grasp domain1.70E-05
WP_058523523.1 17662 17920 + 85NO PFAM MATCH---
WP_058523522.1 17923 18952 + 342PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-32
WP_058523521.1 18948 19971 + 340PF07812TfuATfuA-like protein1.80E-30
WP_265663789.1 20954 19946 - 335NO PFAM MATCH---
WP_265663790.1 21523 22576 + 350NO PFAM MATCH---
WP_058523518.1 22602 23436 + 277PF00196
PF08281
GerE
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
1.60E-10
2.20E-08
WP_083503110.1 23841 23394 - 148PF13279
PF03061
4HBT_2
4HBT
Thioesterase-like superfamily
Thioesterase superfamily
4.10E-14
7.60E-08
WP_058523517.1 23955 24147 + 63PF02599CsrAGlobal regulator protein family2.10E-13
WP_115317180.1 24153 24939 + 261PF07603DUF1566Protein of unknown function (DUF1566)4.80E-08
WP_058523515.1 24949 25810 + 286PF07603DUF1566Protein of unknown function (DUF1566)2.40E-08

Results for WP_028384871.1 [Legionella moravica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028384863.1 45522 42495 - 1008PF02913
PF01565
PF13183
PF13534
PF12838
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_17
Fer4_7
FAD linked oxidases, C-terminal domain
FAD binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
5.20E-50
1.20E-34
7.00E-13
1.70E-05
6.50E-04
WP_028384864.1 47874 45648 - 741PF01494
PF07992
PF03486
PF01266
PF00890
FAD_binding_3
Pyr_redox_2
HI0933_like
DAO
FAD_binding_2
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
HI0933-like protein
FAD dependent oxidoreductase
FAD binding domain
7.40E-08
7.60E-07
8.60E-07
4.60E-06
4.90E-06
WP_081675671.1 48915 47976 - 312PF00892EamAEamA-like transporter family4.50E-36
WP_028384866.1 49610 48971 - 212PF00156
PF15609
PF14681
Pribosyltran
PRTase_2
UPRTase
Phosphoribosyl transferase domain
Phosphoribosyl transferase
Uracil phosphoribosyltransferase
1.70E-23
3.50E-05
3.10E-04
WP_162145894.1 50683 49960 - 240PF13921Myb_DNA-bind_6Myb-like DNA-binding domain1.00E-08
WP_028384868.1 50928 51366 + 145PF06903VirKVirK protein3.90E-13
WP_028384869.1 51508 52387 + 292NO PFAM MATCH---
WP_028384870.1 52390 53185 + 264PF00881NitroreductaseNitroreductase family1.40E-06
WP_028384871.1 53186 54401 + 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-14
WP_028384872.1 54700 55369 + 222PF13505OMP_b-brlOuter membrane protein beta-barrel domain6.90E-04
WP_028384873.1 55778 57782 + 667PF00515
PF07719
TPR_1
TPR_2
Tetratricopeptide repeat
Tetratricopeptide repeat
7.90E-04
8.20E-04
WP_028384874.1 59095 57913 - 393PF00069
PF07714
PF01163
PF03109
Pkinase
PK_Tyr_Ser-Thr
RIO1
ABC1
Protein kinase domain
Protein tyrosine and serine/threonine kinase
RIO1 family
ABC1 atypical kinase-like domain
3.70E-19
2.10E-16
2.20E-07
8.60E-06
WP_028384875.1 59462 61262 + 599NO PFAM MATCH---
WP_028384876.1 62508 61341 - 388PF12796
PF13857
PF13637
PF13606
PF00023
Ank_2
Ank_5
Ank_4
Ank_3
Ank
Ankyrin repeats (3 copies)
Ankyrin repeats (many copies)
Ankyrin repeats (many copies)
Ankyrin repeat
Ankyrin repeat
1.20E-39
3.20E-22
8.30E-22
1.40E-21
1.60E-20
WP_028384877.1 64493 62537 - 651PF00069PkinaseProtein kinase domain2.20E-05
WP_028384878.1 65476 65101 - 124NO PFAM MATCH---
WP_051190700.1 67945 65677 - 755PF00314ThaumatinThaumatin family7.70E-20

Results for WP_058464697.1 [Legionella quateirensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058472674.1 140604 139137 - 488PF03743TrbIBacterial conjugation TrbI-like protein2.60E-10
WP_058472675.1 141379 140644 - 244PF06586TraKTraK protein2.80E-32
WP_058464701.1 141932 141371 - 186PF05309TraETraE protein5.00E-30
WP_021460416.1 142227 141936 - 96PF07178TraLTraL protein3.90E-05
WP_058464700.1 142538 142226 - 103PF05513TraATraA7.70E-09
WP_058464699.1 143016 142644 - 123NO PFAM MATCH---
WP_058393350.1 143237 143051 - 61NO PFAM MATCH---
WP_058464698.1 144385 143350 - 344PF07812TfuATfuA-like protein1.10E-34
WP_058464697.1 145439 144377 - 353PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-37
WP_058464696.1 146458 145435 - 340PF00899ThiFThiF family3.00E-49
WP_019235296.1 146714 146462 - 83PF02597ThiSThiS family1.90E-06
WP_058464695.1 148027 146863 - 387PF13535ATP-grasp_4ATP-grasp domain5.90E-08
WP_058464694.1 149261 147998 - 420NO PFAM MATCH---
WP_019235293.1 149443 149638 + 64NO PFAM MATCH---
WP_058464693.1 149659 150682 + 340PF01978
PF01022
PF13412
TrmB
HTH_5
HTH_24
Sugar-specific transcriptional regulator TrmB
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
7.50E-06
3.10E-04
5.20E-04
WP_058472676.1 152138 150683 - 484PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
7.00E-29
1.00E-15
WP_065240137.1 152732 152171 - 186PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
3.60E-31
1.20E-12

Results for WP_058472465.1 [Legionella quateirensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058472471.1 103875 102966 - 302PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
1.70E-39
5.50E-09
WP_065240131.1 104656 103906 - 249PF13505OMP_b-brlOuter membrane protein beta-barrel domain6.00E-06
WP_058472549.1 105482 104792 - 229PF01988VIT1VIT family8.50E-56
WP_058472470.1 106244 105605 - 212PF00156
PF14681
PF15609
Pribosyltran
UPRTase
PRTase_2
Phosphoribosyl transferase domain
Uracil phosphoribosyltransferase
Phosphoribosyl transferase
4.60E-26
2.70E-06
3.20E-06
WP_058472469.1 107370 106728 - 213PF13921Myb_DNA-bind_6Myb-like DNA-binding domain6.00E-09
WP_058472468.1 107594 108032 + 145PF06903VirKVirK protein2.70E-14
WP_058472467.1 108180 109059 + 292NO PFAM MATCH---
WP_058472466.1 109062 109857 + 264PF00881NitroreductaseNitroreductase family1.10E-05
WP_058472465.1 109858 111073 + 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-14
WP_058472464.1 111272 111941 + 222PF13568OMP_b-brl_2Outer membrane protein beta-barrel domain2.40E-04
WP_058472463.1 112258 114262 + 667PF00515
PF07719
TPR_1
TPR_2
Tetratricopeptide repeat
Tetratricopeptide repeat
1.60E-04
6.00E-04
WP_058472462.1 115601 114419 - 393PF00069
PF07714
PF01163
PF03109
PF01636
Pkinase
PK_Tyr_Ser-Thr
RIO1
ABC1
APH
Protein kinase domain
Protein tyrosine and serine/threonine kinase
RIO1 family
ABC1 atypical kinase-like domain
Phosphotransferase enzyme family
3.20E-19
4.90E-17
3.00E-07
5.00E-07
7.90E-05
WP_058472461.1 115933 117724 + 596NO PFAM MATCH---
WP_058472460.1 117826 119473 + 548PF16062DUF4804Domain of unknown function (DUF4804)2.70E-06
WP_058472459.1 121017 119583 - 477NO PFAM MATCH---
WP_058472458.1 122293 121126 - 388PF12796
PF13637
PF13857
PF00023
PF13606
Ank_2
Ank_4
Ank_5
Ank
Ank_3
Ankyrin repeats (3 copies)
Ankyrin repeats (many copies)
Ankyrin repeats (many copies)
Ankyrin repeat
Ankyrin repeat
9.40E-27
5.00E-21
9.70E-21
2.60E-20
3.40E-20
WP_058472457.1 124277 122318 - 652PF00069PkinaseProtein kinase domain4.70E-07

Results for WP_058464697.1 [Legionella quateirensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058472674.1 140604 139137 - 488PF03743TrbIBacterial conjugation TrbI-like protein2.60E-10
WP_058472675.1 141379 140644 - 244PF06586TraKTraK protein2.80E-32
WP_058464701.1 141932 141371 - 186PF05309TraETraE protein5.00E-30
WP_021460416.1 142227 141936 - 96PF07178TraLTraL protein3.90E-05
WP_058464700.1 142538 142226 - 103PF05513TraATraA7.70E-09
WP_058464699.1 143016 142644 - 123NO PFAM MATCH---
WP_058393350.1 143237 143051 - 61NO PFAM MATCH---
WP_058464698.1 144385 143350 - 344PF07812TfuATfuA-like protein1.10E-34
WP_058464697.1 145439 144377 - 353PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-37
WP_058464696.1 146458 145435 - 340PF00899ThiFThiF family3.00E-49
WP_019235296.1 146714 146462 - 83PF02597ThiSThiS family1.90E-06
WP_058464695.1 148027 146863 - 387PF13535ATP-grasp_4ATP-grasp domain5.90E-08
WP_058464694.1 149261 147998 - 420NO PFAM MATCH---
WP_019235293.1 149443 149638 + 64NO PFAM MATCH---
WP_058464693.1 149659 150682 + 340PF01978
PF01022
PF13412
TrmB
HTH_5
HTH_24
Sugar-specific transcriptional regulator TrmB
Bacterial regulatory protein, arsR family
Winged helix-turn-helix DNA-binding
7.50E-06
3.10E-04
5.20E-04
WP_058472676.1 152138 150683 - 484PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
7.00E-29
1.00E-15
WP_065240137.1 152732 152171 - 186PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
3.60E-31
1.20E-12

Results for WP_004017479.1 [Mobiluncus mulieris] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004017468.1 27835 26107 - 575PF00005
PF00664
PF06414
ABC_tran
ABC_membrane
Zeta_toxin
ABC transporter
ABC transporter transmembrane region
Zeta toxin
9.10E-31
3.10E-10
2.50E-05
WP_004014795.1 29576 27839 - 578PF00005
PF00664
PF02463
ABC_tran
ABC_membrane
SMC_N
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
1.70E-27
2.00E-19
2.80E-08
WP_004014796.1 29736 30771 + 344PF01032FecCDFecCD transport family3.40E-82
WP_004012975.1 30783 31542 + 252PF13649
PF08241
PF13489
PF08242
PF13847
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.90E-16
1.90E-15
1.50E-09
6.20E-09
7.60E-09
WP_004017488.1 31550 32297 + 248PF13847
PF13649
PF08241
PF08242
PF02390
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_4
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Putative methyltransferase
5.90E-12
1.60E-10
2.20E-07
1.00E-06
7.50E-04
WP_004014799.1 33082 32308 - 257PF00005
PF13304
PF02463
PF13476
PF01637
ABC_tran
AAA_21
SMC_N
AAA_23
ATPase_2
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
ATPase domain predominantly from Archaea
6.50E-31
3.20E-12
3.10E-09
5.00E-06
6.10E-04
WP_004017463.1 34106 33092 - 337PF01497Peripla_BP_2Periplasmic binding protein4.30E-23
WP_004017470.1 35589 34434 - 384PF00326Peptidase_S9Prolyl oligopeptidase family2.90E-17
WP_004017479.1 35913 38133 + 739PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-51
WP_231282778.1 38203 38443 + 79NO PFAM MATCH---
FYZ44_RS10340 38794 38971 + 59INFERRED GENE---
WP_076611145.1 39007 39145 + 46INFERRED GENE---

Results for WP_058393348.1 [Legionella pneumophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_269568811.1 596 0 - 198PF06586TraKTraK protein2.30E-23
WP_021460417.1 1149 588 - 186PF05309TraETraE protein1.90E-30
WP_042238380.1 1444 1153 - 96PF07178TraLTraL protein3.10E-05
WP_058393352.1 1755 1443 - 103PF05513TraATraA8.20E-09
WP_058478472.1 2233 1861 - 123NO PFAM MATCH---
WP_058393350.1 2454 2268 - 61NO PFAM MATCH---
WP_058478471.1 3602 2567 - 344PF07812TfuATfuA-like protein1.00E-34
WP_058393348.1 4656 3594 - 353PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-36
WP_058393347.1 5675 4652 - 340PF00899ThiFThiF family1.60E-49
WP_058393346.1 5931 5679 - 83PF02597ThiSThiS family1.60E-06
WP_010948192.1 6002 7907 + 635INFERRED GENE---
WP_011947405.1 8223 7986 - 78NO PFAM MATCH---
WP_011947404.1 8942 8258 - 227PF04002
PF20582
RadC
UPF0758_N
RadC-like JAB domain
UPF0758 N-terminal
4.70E-40
3.00E-18
WP_013101834.1 9018 10215 + 398PF04127
PF02441
DFP
Flavoprotein
DNA / pantothenate metabolism flavoprotein
Flavoprotein
1.80E-70
1.50E-45
WP_011947402.1 10241 10700 + 152PF00692dUTPasedUTPase1.10E-39
WP_013101833.1 10700 12089 + 462PF02878
PF02879
PF02880
PF00408
PGM_PMM_I
PGM_PMM_II
PGM_PMM_III
PGM_PMM_IV
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Phosphoglucomutase/phosphomannomutase, C-terminal domain
8.20E-34
3.60E-28
2.20E-20
8.70E-10

Results for WP_033771267.1 [Pantoea agglomerans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010254951.1 3206142 3205155 - 328PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase1.10E-119
WP_010669759.1 3207887 3206138 - 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
7.50E-59
1.70E-35
5.90E-10
6.60E-06
3.00E-04
WP_062757320.1 3210177 3207921 - 751PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
6.80E-50
6.70E-21
2.60E-06
WP_003849360.1 3210666 3210381 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_003849352.1 3212422 3210748 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-98
9.90E-13
3.20E-07
WP_062757318.1 3213217 3212530 - 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.10E-82
2.30E-07
3.40E-05
5.30E-05
7.80E-04
WP_010254943.1 3214702 3213415 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.30E-148
WP_033757140.1 3215870 3214784 - 361PF00266Aminotran_5Aminotransferase class-V3.00E-64
WP_033771267.1 3216196 3217960 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.20E-84
6.40E-67
WP_010254939.1 3218333 3219194 + 286PF01226Form_Nir_transFormate/nitrite transporter2.20E-72
WP_010254936.1 3219265 3221548 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.70E-204
8.10E-44
WP_062757316.1 3221712 3222453 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.90E-31
4.40E-17
2.60E-05
WP_010254932.1 3223658 3222506 - 383PF07690
PF06779
PF00083
PF13347
MFS_1
MFS_4
Sugar_tr
MFS_2
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS/sugar transport protein
3.90E-32
1.50E-10
1.80E-06
2.20E-04
WP_010254930.1 3225269 3223976 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.30E-37
1.30E-33
WP_033757131.1 3226705 3225361 - 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
1.30E-63
1.40E-23
6.20E-17
2.30E-14
3.10E-07
WP_003849334.1 3227324 3226712 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.00E-56
1.10E-05
WP_062757314.1 3231050 3227501 - 1182PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.70E-72
1.30E-43
5.60E-28
5.00E-27
4.40E-05

Results for WP_042255864.1 [Nocardia brasiliensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_226887250.1 1127310 1124952 - 785PF02775TPP_enzyme_CThiamine pyrophosphate enzyme, C-terminal TPP binding domain3.80E-04
WP_081868809.1 1128236 1127387 - 282PF04072LCMLeucine carboxyl methyltransferase1.50E-26
WP_042255902.1 1129395 1128249 - 381PF00296Bac_luciferaseLuciferase-like monooxygenase7.80E-50
WP_146153920.1 1129879 1129459 - 139PF19382DUF5957Family of unknown function (DUF5957)7.00E-04
WP_042255860.1 1130084 1130627 + 180PF00132HexapepBacterial transferase hexapeptide (six repeats)1.70E-12
WP_042255861.1 1130796 1131999 + 400PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
7.50E-35
2.10E-12
WP_042255862.1 1132036 1132456 + 139PF07876DabbStress responsive A/B Barrel Domain5.40E-14
WP_042255863.1 1133944 1132522 - 473PF00881NitroreductaseNitroreductase family6.00E-09
WP_042255864.1 1135842 1133955 - 628PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-78
WP_146153921.1 1137649 1135831 - 605NO PFAM MATCH---
WP_042255866.1 1137867 1138065 + 65NO PFAM MATCH---
WP_042255867.1 1139184 1138107 - 358PF10117McrBCMcrBC 5-methylcytosine restriction system component3.10E-15
WP_042255869.1 1140952 1139185 - 588PF07728
PF13401
PF05729
PF00004
PF01078
AAA_5
AAA_22
NACHT
AAA
Mg_chelatase
AAA domain (dynein-related subfamily)
AAA domain
NACHT domain
ATPase family associated with various cellular activities (AAA)
Magnesium chelatase, subunit ChlI
4.90E-24
4.00E-06
1.30E-04
3.30E-04
5.40E-04
WP_042255870.1 1141230 1143462 + 743PF00916
PF00484
PF16983
Sulfate_transp
Pro_CA
MFS_MOT1
Sulfate permease family
Carbonic anhydrase
Molybdate transporter of MFS superfamily
2.30E-69
2.00E-39
5.40E-06
WP_088606717.1 1143804 1145982 + 725PF00916
PF00484
Sulfate_transp
Pro_CA
Sulfate permease family
Carbonic anhydrase
2.20E-72
3.60E-44
WP_042255903.1 1146075 1146495 + 139PF09656PGPGWPutative transmembrane protein (PGPGW)1.00E-22
WP_226887251.1 1146491 1147106 + 204PF11575FhuF_CFhuF 2Fe-2S C-terminal domain1.70E-05

Results for WP_039045653.1 [Plesiomonas shigelloides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_265847141.1 66900 66039 - 286PF12697
PF00561
PF12146
PF00975
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Thioesterase
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Thioesterase domain
1.00E-17
6.30E-16
2.80E-07
6.50E-05
WP_265847142.1 68617 66922 - 564PF16582
PF02776
PF02775
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Middle domain of thiamine pyrophosphate
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
7.60E-75
3.60E-21
8.00E-09
WP_081632915.1 69959 68597 - 453PF00425Chorismate_bindchorismate binding enzyme4.30E-70
WP_010864057.1 70330 71545 + 404PF00155
PF01041
PF00266
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Aminotransferase class I and II
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class-V
9.20E-50
1.60E-06
1.90E-04
WP_265847143.1 71737 72343 + 201PF12917
PF13023
PF01966
PF08668
YfbR-like
HD_3
HD
HDOD
5'-deoxynucleotidase YfbR-like
HD domain
HD domain
HDOD domain
3.80E-78
1.00E-15
2.20E-07
7.10E-04
WP_039045654.1 72389 72827 + 145NO PFAM MATCH---
WP_197665196.1 73983 72906 - 358PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
8.00E-63
1.10E-27
WP_010864061.1 74167 74749 + 193NO PFAM MATCH---
WP_039045653.1 74857 76612 + 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-81
1.50E-69
WP_265847144.1 77279 78188 + 302PF01226Form_Nir_transFormate/nitrite transporter2.40E-75
WP_010864064.1 78200 80483 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.30E-203
5.40E-43
WP_010864065.1 81051 81792 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.10E-33
9.30E-19
2.70E-06
WP_010864066.1 82422 81927 - 164PF03887YfbUYfbU domain6.70E-66
WP_010864067.1 83628 83172 - 151PF04217DUF412Protein of unknown function, DUF4125.50E-55
WP_010864068.1 83946 85149 + 400PF00871Acetate_kinaseAcetokinase family9.50E-177
WP_201765072.1 85239 87363 + 707PF01515
PF13500
PF07085
PTA_PTB
AAA_26
DRTGG
Phosphate acetyl/butaryl transferase
AAA domain
DRTGG domain
7.00E-127
3.20E-48
7.90E-28
WP_010864070.1 88070 87557 - 170PF00293NUDIXNUDIX domain2.70E-16

Results for WP_048252385.1 [Pluralibacter gergoviae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_045288001.1 3359805 3358056 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
2.00E-58
7.90E-35
1.10E-10
3.60E-05
1.30E-04
WP_048252388.1 3362103 3359841 - 753PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.30E-51
7.20E-17
2.90E-04
WP_043084806.1 3362604 3362316 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
5.80E-29
8.00E-08
1.30E-04
WP_043084808.1 3364422 3362748 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.70E-99
1.50E-11
9.20E-07
WP_000125007.1 3364547 3365233 + 228INFERRED GENE---
WP_048252387.1 3366676 3365392 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.70E-152
WP_064360646.1 3367838 3366749 - 362PF00266Aminotran_5Aminotransferase class-V3.70E-67
WP_048252386.1 3368461 3368017 - 147NO PFAM MATCH---
WP_048252385.1 3368595 3370365 + 589PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.20E-81
3.50E-66
WP_043084816.1 3370761 3371619 + 285PF01226Form_Nir_transFormate/nitrite transporter9.80E-75
NP_455460.1 3371670 3373954 + 761INFERRED GENE---
YP_004593215.1 3374157 3374899 + 247INFERRED GENE---
WP_015962382.1 3374925 3375785 + 286INFERRED GENE---
WP_048252383.1 3377020 3375871 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
1.40E-28
2.10E-10
6.90E-06
WP_048252381.1 3378157 3377293 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.40E-107
WP_045288010.1 3378776 3378158 - 205PF13247
PF00037
PF12797
PF13187
PF12838
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
2.20E-27
8.80E-13
9.00E-13
3.00E-12
6.40E-11
NP_459940.1 3378786 3381229 + 814INFERRED GENE---

Results for WP_014657839.1 [Providencia stuartii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_206088946.1 313279 315388 + 702PF00664
PF00005
PF03412
PF02463
PF13401
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
ABC transporter transmembrane region
ABC transporter
Peptidase C39 family
RecF/RecN/SMC N terminal domain
AAA domain
1.90E-43
8.30E-33
3.60E-07
4.70E-05
7.40E-05
WP_004918124.1 315556 315850 + 97PF01402RHH_1Ribbon-helix-helix protein, copG family9.10E-08
WP_014657842.1 315996 316524 + 175PF00258
PF12641
PF12724
Flavodoxin_1
Flavodoxin_3
Flavodoxin_5
Flavodoxin
Flavodoxin domain
Flavodoxin domain
1.00E-32
2.20E-10
2.30E-07
WP_004918120.1 316697 317147 + 149PF01475FURFerric uptake regulator family8.90E-48
WP_036943604.1 320129 317450 - 892PF00728
PF03173
PF03174
PF02838
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Glycosyl hydrolase family 20, catalytic domain
Putative carbohydrate binding domain
Chitobiase/beta-hexosaminidase C-terminal domain
Glycosyl hydrolase family 20, domain 2
2.30E-110
1.00E-61
3.50E-26
1.60E-12
WP_036943602.1 321595 320197 - 465PF03573OprDouter membrane porin, OprD family7.60E-21
JY537_RS01440 322209 323505 + 432INFERRED GENE---
WP_014657840.1 324585 323541 - 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
6.90E-60
6.70E-25
WP_014657839.1 324763 326518 + 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-83
6.90E-67
WP_206088947.1 326861 327719 + 285PF01226Form_Nir_transFormate/nitrite transporter8.00E-74
WP_004918106.1 327788 330071 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.50E-207
1.60E-43
WP_052127998.1 330214 331009 + 264PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.00E-31
2.90E-18
1.30E-05
WP_036943599.1 331676 331049 - 208PF01810LysELysE type translocator1.60E-23
WP_036943597.1 332135 331712 - 140PF09391DUF2000Protein of unknown function (DUF2000)2.90E-36
WP_004918098.1 332302 332782 + 159PF01037
PF13412
PF13404
AsnC_trans_reg
HTH_24
HTH_AsnC-type
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
6.80E-21
3.80E-20
5.30E-16
WP_036943595.1 334152 332862 - 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.80E-36
6.50E-32
WP_154599093.1 335589 334302 - 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.40E-64
8.00E-24
2.10E-16
6.40E-15
8.30E-07

Results for WP_038443287.1 [Pseudomonas fluorescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003171868.1 5192486 5192030 - 151PF02381MraZMraZ protein, putative antitoxin-like2.60E-33
WP_038443280.1 5194162 5193289 - 290PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases2.90E-27
WP_038443282.1 5194381 5196193 + 603PF04348
PF13458
LppC
Peripla_BP_6
LppC putative lipoprotein
Periplasmic binding protein
1.10E-168
1.90E-07
WP_038443283.1 5196192 5196564 + 123PF02021UPF0102Uncharacterised protein family UPF01023.60E-26
WP_003171862.1 5196668 5197262 + 197PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
1.20E-33
9.40E-07
WP_038443284.1 5197258 5197840 + 193PF04972BONBON domain4.60E-28
WP_029297808.1 5198670 5197908 - 253PF00691
PF13488
PF13441
OmpA
Gly-zipper_Omp
Gly-zipper_YMGG
OmpA family
Glycine zipper
YMGG-like Gly-zipper
6.30E-22
2.20E-05
8.10E-04
WP_038443286.1 5199481 5198836 - 214PF00753Lactamase_BMetallo-beta-lactamase superfamily3.60E-29
WP_038443287.1 5201840 5199638 - 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.60E-73
2.90E-72
3.80E-08
WP_115284362.1 5204651 5201912 - 912PF00196
PF17874
PF13191
GerE
TPR_MalT
AAA_16
Bacterial regulatory proteins, luxR family
MalT-like TPR region
AAA ATPase domain
6.60E-18
8.50E-13
6.60E-06
WP_038443291.1 5206293 5204928 - 454PF07044
PF17131
DUF1329
LolA_like
Protein of unknown function (DUF1329)
Outer membrane lipoprotein-sorting protein
4.30E-157
3.20E-07
WP_115284363.1 5208196 5206321 - 624PF06980DUF1302Protein of unknown function (DUF1302)1.90E-172
WP_038443294.1 5210214 5208531 - 560PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.80E-84
6.30E-17
WP_038443296.1 5210990 5210360 - 209PF01810LysELysE type translocator1.80E-33
WP_038443297.1 5211074 5212040 + 321PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
6.10E-51
1.20E-24
WP_038443299.1 5212071 5213070 + 332PF05175
PF08468
PF13649
PF08242
PF00891
MTS
MTS_N
Methyltransf_25
Methyltransf_12
Methyltransf_2
Methyltransferase small domain
Methyltransferase small domain N-terminal
Methyltransferase domain
Methyltransferase domain
O-methyltransferase domain
1.90E-55
9.30E-43
3.50E-08
4.50E-06
1.80E-05
WP_038443301.1 5213330 5213915 + 194PF01169UPF0016Uncharacterized protein family UPF00163.70E-41

Results for WP_057958480.1 [Pseudomonas shahriarae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_057958485.1 202283 202775 + 163PF02566OsmCOsmC-like protein4.70E-12
WP_057958484.1 202918 203359 + 146PF04143Sulf_transpSulphur transport3.30E-07
WP_057958483.1 203355 203775 + 139PF20398DUF6691Family of unknown function (DUF6691)1.40E-49
WP_252117429.1 203788 203977 + 62PF11127DUF2892Protein of unknown function (DUF2892)4.30E-23
WP_015276635.1 204180 204388 + 69INFERRED GENE---
WP_057958481.1 204593 205151 + 185PF11845DUF3365Protein of unknown function (DUF3365)2.10E-22
NEE03_RS10535 205405 205492 + 29INFERRED GENE---
NP_249523.1 205584 205802 + 72INFERRED GENE---
WP_057958480.1 208024 205834 - 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.00E-74
8.90E-72
3.10E-08
WP_120734134.1 210835 208096 - 912PF00196
PF17874
PF13191
GerE
TPR_MalT
AAA_16
Bacterial regulatory proteins, luxR family
MalT-like TPR region
AAA ATPase domain
5.30E-18
2.80E-11
1.60E-07
WP_057958478.1 212432 211067 - 454PF07044
PF17131
DUF1329
LolA_like
Protein of unknown function (DUF1329)
Outer membrane lipoprotein-sorting protein
1.30E-156
3.90E-07
WP_057958477.1 214335 212460 - 624PF06980DUF1302Protein of unknown function (DUF1302)1.40E-171
WP_057438159.1 216353 214670 - 560PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
7.20E-85
6.40E-17
WP_252117430.1 217130 216500 - 209PF01810LysELysE type translocator1.10E-34
WP_128592808.1 217214 218180 + 321PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
4.20E-50
2.10E-23
WP_057958474.1 218211 219210 + 332PF05175
PF08468
PF13649
PF08242
PF00891
MTS
MTS_N
Methyltransf_25
Methyltransf_12
Methyltransf_2
Methyltransferase small domain
Methyltransferase small domain N-terminal
Methyltransferase domain
Methyltransferase domain
O-methyltransferase domain
1.00E-55
2.10E-42
2.90E-08
5.40E-06
8.40E-06
WP_057438151.1 219470 220055 + 194PF01169UPF0016Uncharacterized protein family UPF00163.70E-41

Results for WP_019460849.1 [Roseomonas mucosa] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_239371248.1 1304 0 - 435PF00196GerEBacterial regulatory proteins, luxR family3.70E-09
WP_019460850.1 1558 4888 + 1109PF13191
PF00211
PF07647
PF00536
PF05729
AAA_16
Guanylate_cyc
SAM_2
SAM_1
NACHT
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
SAM domain (Sterile alpha motif)
SAM domain (Sterile alpha motif)
NACHT domain
8.80E-20
2.80E-15
1.20E-09
1.30E-09
5.40E-06
WP_019460849.1 4884 6153 + 422PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-74
WP_019460848.1 6149 7544 + 464PF07812TfuATfuA-like protein3.20E-42
WP_019460847.1 7547 8948 + 466NO PFAM MATCH---
WP_026033134.1 9014 9596 + 193NO PFAM MATCH---
WP_019460846.1 9853 10597 + 247PF00027
PF13545
PF12802
cNMP_binding
HTH_Crp_2
MarR_2
Cyclic nucleotide-binding domain
Crp-like helix-turn-helix domain
MarR family
9.10E-20
3.20E-13
3.30E-04
WP_019460845.1 10775 10607 - 55NO PFAM MATCH---
WP_019460844.1 11720 11147 - 190PF04955
PF13795
HupE_UreJ
HupE_UreJ_2
HupE / UreJ protein
HupE / UreJ protein
4.00E-54
1.30E-04
WP_019460843.1 12433 11719 - 237PF02492
PF03308
cobW
MeaB
CobW/HypB/UreG, nucleotide-binding domain
Methylmalonyl Co-A mutase-associated GTPase MeaB
1.70E-34
9.10E-04
WP_026033133.1 13116 12429 - 228PF01730UreFUreF5.10E-33

Results for WP_074859302.1 [Pseudomonas oleovorans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074859324.1 2843040 2843613 + 190PF04264YceIYceI-like domain5.00E-12
WP_172480658.1 2843615 2844770 + 384PF13091
PF00614
PLDc_2
PLDc
PLD-like domain
Phospholipase D Active site motif
1.50E-43
1.20E-06
WP_074859317.1 2846153 2844809 - 447PF02667
PF03806
PF03606
SCFA_trans
ABG_transport
DcuC
Short chain fatty acid transporter
AbgT putative transporter family
C4-dicarboxylate anaerobic carrier
4.90E-154
4.50E-07
3.50E-05
WP_074859314.1 2847518 2846336 - 393PF00108
PF02803
PF00109
Thiolase_N
Thiolase_C
ketoacyl-synt
Thiolase, N-terminal domain
Thiolase, C-terminal domain
Beta-ketoacyl synthase, N-terminal domain
2.00E-108
3.10E-52
5.10E-07
WP_074859311.1 2848323 2847666 - 218PF01144
PF13336
CoA_trans
AcetylCoA_hyd_C
Coenzyme A transferase
Acetyl-CoA hydrolase/transferase C-terminal domain
2.10E-42
1.20E-05
WP_074859308.1 2849034 2848335 - 232PF01144CoA_transCoenzyme A transferase1.10E-77
WP_003459617.1 2849140 2850025 + 294PF03466
PF00126
PF12802
LysR_substrate
HTH_1
MarR_2
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
MarR family
2.90E-43
2.50E-22
2.80E-05
WP_074859305.1 2850672 2850078 - 197PF12804NTP_transf_3MobA-like NTP transferase domain3.00E-33
WP_074859302.1 2852873 2850674 - 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.10E-75
1.70E-72
1.70E-07
WP_013714339.1 2853002 2853442 + 146INFERRED GENE---
WP_046622600.1 2853433 2853730 + 99INFERRED GENE---
WP_003459627.1 2855232 2854068 - 387PF09983
PF11795
DUF2220
DUF3322
Uncharacterized protein conserved in bacteria C-term(DUF2220)
Uncharacterized protein conserved in bacteria N-term (DUF3322)
1.40E-53
4.80E-50
WP_074859299.1 2858593 2855218 - 1124PF13555
PF13558
PF13476
PF00005
AAA_29
SbcC_Walker_B
AAA_23
ABC_tran
P-loop containing region of AAA domain
SbcC/RAD50-like, Walker B motif
AAA domain
ABC transporter
3.90E-24
1.30E-22
1.10E-04
2.50E-04
WP_003459631.1 2859297 2858589 - 235PF13835DUF4194Domain of unknown function (DUF4194)5.00E-44
WP_074859337.1 2860744 2859283 - 486PF11855DUF3375Protein of unknown function (DUF3375)8.60E-153
WP_003459634.1 2860901 2861816 + 304PF13280WYLWYL domain1.30E-13
WP_011911785.1 2862019 2863057 + 346INFERRED GENE---

Results for WP_051417851.1 [Roseomonas gilardii subsp. rosea] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_027280649.1 393430 394117 + 228PF01730UreFUreF1.20E-31
WP_027280648.1 394113 394821 + 235PF02492
PF03308
cobW
MeaB
CobW/HypB/UreG, nucleotide-binding domain
Methylmalonyl Co-A mutase-associated GTPase MeaB
2.40E-34
5.20E-04
WP_027280647.1 394820 395393 + 190PF04955
PF13795
HupE_UreJ
HupE_UreJ_2
HupE / UreJ protein
HupE / UreJ protein
3.70E-54
1.50E-04
WP_155984491.1 395492 395660 + 55NO PFAM MATCH---
WP_237183101.1 396399 395670 - 242PF00027
PF13545
PF12802
cNMP_binding
HTH_Crp_2
MarR_2
Cyclic nucleotide-binding domain
Crp-like helix-turn-helix domain
MarR family
9.50E-20
2.30E-13
3.00E-04
WP_027280645.1 397229 396653 - 191NO PFAM MATCH---
WP_051417853.1 398678 397295 - 460NO PFAM MATCH---
WP_248696751.1 399881 398681 - 399PF07812TfuATfuA-like protein3.10E-42
WP_051417851.1 401293 400024 - 422PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.50E-73
WP_147290828.1 404619 401289 - 1109PF13191
PF00211
PF07647
PF00536
PF05729
AAA_16
Guanylate_cyc
SAM_2
SAM_1
NACHT
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
SAM domain (Sterile alpha motif)
SAM domain (Sterile alpha motif)
NACHT domain
1.20E-20
1.40E-15
2.30E-09
3.30E-09
2.00E-06
WP_027280642.1 404874 406230 + 451PF00196GerEBacterial regulatory proteins, luxR family3.30E-09
WP_037225042.1 408221 406301 - 639PF08676
PF01119
PF13589
PF02518
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
MutL C terminal dimerisation domain
DNA mismatch repair protein, C-terminal domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
3.20E-41
4.10E-31
1.30E-07
2.90E-05
WP_037225009.1 408564 408318 - 81PF09939DUF2171Uncharacterized protein conserved in bacteria (DUF2171)2.60E-12
WP_027280640.1 409483 408700 - 260PF13085
PF13534
PF13183
PF13237
Fer2_3
Fer4_17
Fer4_8
Fer4_10
2Fe-2S iron-sulfur cluster binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.40E-33
1.50E-09
2.50E-09
4.30E-06
WP_027280639.1 411315 409500 - 604PF00890
PF02910
PF01134
PF07992
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
FAD binding domain
Fumarate reductase flavoprotein C-term
Glucose inhibited division protein A
Pyridine nucleotide-disulphide oxidoreductase
1.30E-121
1.40E-45
2.50E-06
2.50E-04
WP_027280638.1 411913 411517 - 131PF01127
PF05328
Sdh_cyt
CybS
Succinate dehydrogenase/Fumarate reductase transmembrane subunit
CybS, succinate dehydrogenase cytochrome B small subunit
1.50E-17
1.00E-06
WP_027280637.1 412382 411932 - 149PF01127Sdh_cytSuccinate dehydrogenase/Fumarate reductase transmembrane subunit1.40E-26

Results for WP_019169087.1 [Staphylococcus intermedius NCTC 11048] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019169078.1 2639964 2639472 - 163PF02542YgbBYgbB family2.60E-65
WP_019169079.1 2640655 2639956 - 232PF01128
PF12804
IspD
NTP_transf_3
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
MobA-like NTP transferase domain
1.70E-68
8.50E-11
WP_019169080.1 2641717 2640655 - 353PF18477PIN_9PIN like domain4.30E-05
WP_019169081.1 2643106 2641735 - 456PF06745
PF13481
PF18073
PF08423
PF13541
ATPase
AAA_25
Rubredoxin_2
Rad51
ChlI
KaiC
AAA domain
Rubredoxin metal binding domain
Rad51
Subunit ChlI of Mg-chelatase
5.00E-16
7.60E-16
3.30E-13
1.20E-08
6.30E-08
WP_019169083.1 2644234 2643487 - 248PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.30E-15
4.10E-13
WP_019169084.1 2644928 2644220 - 235PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
2.80E-28
2.20E-07
WP_019169085.1 2645899 2644939 - 319NO PFAM MATCH---
WP_019169086.1 2646708 2645895 - 270PF00881NitroreductaseNitroreductase family8.10E-18
WP_019169087.1 2647948 2646727 - 406PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-44
WP_019169088.1 2648796 2647944 - 283NO PFAM MATCH---
WP_019169089.1 2652316 2649856 - 819PF07724
PF17871
PF02861
PF10431
PF00004
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA domain (Cdc48 subfamily)
AAA lid domain
Clp amino terminal domain, pathogenicity island component
C-terminal, D2-small domain, of ClpB protein
ATPase family associated with various cellular activities (AAA)
3.70E-58
1.40E-36
2.30E-33
3.90E-27
4.20E-27
WP_174700869.1 2653333 2652331 - 333PF00217ATP-gua_PtransATP:guanido phosphotransferase, C-terminal catalytic domain8.00E-67
WP_019169091.1 2653856 2653325 - 176PF02151UVRUvrB/uvrC motif4.20E-05
WP_014614779.1 2654332 2653870 - 153PF05848
PF17727
CtsR
CtsR_C
CtsR N-terminal HTH domain
CtsR C-terminal dimerization domain
1.20E-36
8.30E-21
WP_019169092.1 2654496 2655702 + 401PF07662
PF01773
PF07670
Nucleos_tra2_C
Nucleos_tra2_N
Gate
Na+ dependent nucleoside transporter C-terminus
Na+ dependent nucleoside transporter N-terminus
Nucleoside recognition
2.50E-64
7.70E-20
2.10E-05
WP_019169093.1 2656331 2655773 - 185PF01174
PF00117
PF07685
PF03575
SNO
GATase
GATase_3
Peptidase_S51
SNO glutamine amidotransferase family
Glutamine amidotransferase class-I
CobB/CobQ-like glutamine amidotransferase domain
Peptidase family S51
4.20E-67
2.80E-08
1.40E-06
2.90E-04
WP_019169094.1 2657220 2656332 - 295PF01680
PF05690
PF01207
PF00977
PF03060
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
SOR/SNZ family
Thiazole biosynthesis protein ThiG
Dihydrouridine synthase (Dus)
Histidine biosynthesis protein
Nitronate monooxygenase
3.70E-105
8.60E-11
2.70E-07
3.90E-05
3.00E-04

Results for WP_048800829.1 [Streptococcus constellatus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003036392.1 66274 66772 + 165PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
1.40E-07
6.00E-06
WP_002874851.1 66845 67350 + 168INFERRED GENE---
WP_086558257.1 67432 68565 + 377INFERRED GENE---
WP_003028451.1 68658 69258 + 200INFERRED GENE---
WP_019314402.1 69261 69843 + 194INFERRED GENE---
WP_080980148.1 70247 70409 + 53NO PFAM MATCH---
WP_049476986.1 70623 71571 + 315PF00881NitroreductaseNitroreductase family4.90E-15
WP_048800830.1 71570 72638 + 355NO PFAM MATCH---
WP_048800829.1 72642 74001 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.00E-41
WP_080980152.1 74041 74644 + 200PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.00E-10
WP_049476985.1 74640 75339 + 232PF19393DUF5968Family of unknown function (DUF5968)1.90E-19
WP_048800826.1 75359 76283 + 307PF00005
PF13304
PF03193
PF13476
PF02463
ABC_tran
AAA_21
RsgA_GTPase
AAA_23
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
AAA domain
RecF/RecN/SMC N terminal domain
1.40E-32
1.20E-13
3.10E-04
3.30E-04
9.80E-04
WP_049476984.1 76291 77419 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.60E-21
1.10E-16
1.70E-12
WP_048800824.1 77415 78534 + 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
3.30E-41
3.10E-21
WP_003036319.1 78692 79580 + 295PF01145
PF16200
Band_7
Band_7_C
SPFH domain / Band 7 family
C-terminal region of band_7
9.70E-29
4.20E-04
WP_003025899.1 79688 79904 + 71NO PFAM MATCH---
WP_049476983.1 81004 80263 - 246PF00005
PF13304
PF02463
PF09818
PF13555
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
P-loop containing region of AAA domain
2.40E-34
4.20E-11
3.40E-10
5.00E-05
5.60E-04

Results for WP_004710033.1 [Yersinia frederiksenii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032911322.1 1210976 1208696 - 759PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
4.80E-54
7.60E-20
5.00E-09
2.00E-06
WP_004710022.1 1211644 1211359 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
7.70E-28
4.10E-07
WP_004391091.1 1213378 1211704 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_004710024.1 1214239 1213546 - 230PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
9.10E-82
1.90E-07
5.00E-05
2.60E-04
6.90E-04
WP_004710026.1 1215838 1214557 - 426PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.80E-148
WP_004710028.1 1217069 1215983 - 361PF00266Aminotran_5Aminotransferase class-V5.20E-67
WP_004710030.1 1217968 1217275 - 230PF04239
PF03604
DUF421
DNA_RNApol_7kD
Protein of unknown function (DUF421)
DNA directed RNA polymerase, 7 kDa subunit
1.00E-15
5.10E-04
WP_004710032.1 1219152 1218114 - 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
2.80E-62
4.40E-26
WP_004710033.1 1219301 1221068 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.80E-81
1.10E-63
WP_004710037.1 1221588 1222446 + 285PF01226Form_Nir_transFormate/nitrite transporter1.70E-74
WP_004710039.1 1222498 1224781 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.40E-206
1.30E-43
WP_032911324.1 1224865 1225606 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
9.50E-19
3.70E-06
WP_004710042.1 1226842 1225693 - 382PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
3.00E-26
4.20E-08
7.80E-05
1.70E-04
WP_004710043.1 1228350 1227057 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
7.60E-36
2.50E-29
WP_032911325.1 1229813 1228469 - 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
3.40E-64
1.30E-22
1.90E-15
8.70E-13
7.70E-07
WP_004710046.1 1230432 1229820 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
2.40E-58
2.80E-05
WP_032913211.1 1234311 1230705 - 1201PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
3.00E-73
1.50E-43
6.80E-28
1.30E-26
3.60E-05

Results for WP_004693339.1 [Acinetobacter johnsonii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004693322.1 1838455 1837228 - 408PF07690MFS_1Major Facilitator Superfamily1.80E-27
WP_004693323.1 1840804 1838530 - 757PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
4.60E-37
2.30E-19
WP_026056448.1 1842085 1840819 - 421PF07690
PF13000
MFS_1
Acatn
Major Facilitator Superfamily
Acetyl-coenzyme A transporter 1
7.20E-21
6.40E-15
WP_004693329.1 1842447 1842066 - 126NO PFAM MATCH---
WP_005399548.1 1842443 1842939 + 165INFERRED GENE---
WP_004693333.1 1843795 1843327 - 155PF04073tRNA_editAminoacyl-tRNA editing domain4.60E-25
WP_004693335.1 1845159 1843962 - 398PF00487FA_desaturaseFatty acid desaturase3.40E-26
WP_004693336.1 1845328 1846261 + 310PF12852
PF00165
PF12833
Cupin_6
HTH_AraC
HTH_18
Cupin
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain
2.30E-24
2.80E-23
2.30E-22
WP_004693339.1 1846543 1848748 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.50E-73
8.60E-73
1.00E-07
WP_004693341.1 1849990 1848817 - 390PF02684LpxBLipid-A-disaccharide synthetase3.90E-103
WP_004693343.1 1850678 1852238 + 519PF03929PepSY_TMPepSY-associated TM region8.70E-61
WP_004693345.1 1852234 1852528 + 97PF07331TctBTripartite tricarboxylate transporter TctB family8.20E-04
WP_004693346.1 1852726 1853323 + 198NO PFAM MATCH---
WP_004693348.1 1853426 1854323 + 298PF01925
PF07698
TauE
7TM-7TMR_HD
Sulfite exporter TauE/SafE
7TM receptor with intracellular HD hydrolase
1.80E-48
5.70E-04
WP_004693350.1 1854462 1855554 + 363PF00793DAHP_synth_1DAHP synthetase I family2.50E-95
WP_004693352.1 1855610 1856135 + 174PF04273BLH_phosphataseBeta-lactamase hydrolase-like protein, phosphatase-like domain7.60E-05
WP_004693354.1 1856611 1856122 - 162PF02542YgbBYgbB family1.40E-63

Results for WP_004961935.1 [Acinetobacter junii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961956.1 1675972 1674955 - 338PF00175
PF00970
PF00111
NAD_binding_1
FAD_binding_6
Fer2
Oxidoreductase NAD-binding domain
Oxidoreductase FAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
7.20E-25
2.50E-20
7.30E-17
WP_039047310.1 1676543 1676042 - 166PF00866
PF13577
Ring_hydroxyl_B
SnoaL_4
Ring hydroxylating beta subunit
SnoaL-like domain
2.60E-47
7.80E-06
WP_151690826.1 1677931 1676554 - 458PF00355
PF00848
Rieske
Ring_hydroxyl_A
Rieske [2Fe-2S] domain
Ring hydroxylating alpha subunit (catalytic domain)
6.70E-23
8.40E-19
WP_004961950.1 1678934 1678013 - 306PF00775
PF04444
PF13620
Dioxygenase_C
Dioxygenase_N
CarboxypepD_reg
Dioxygenase
Catechol dioxygenase N terminus
Carboxypeptidase regulatory-like domain
5.50E-59
9.90E-19
2.80E-04
WP_004911173.1 1679368 1679077 - 96PF02426MIaseMuconolactone delta-isomerase2.50E-41
WP_004961946.1 1680496 1679380 - 371PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
1.40E-42
1.70E-31
9.00E-04
WP_075696512.1 1680607 1681540 + 310PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.40E-37
3.20E-24
WP_004961937.1 1681738 1682812 + 357PF04909Amidohydro_2Amidohydrolase1.60E-20
WP_004961935.1 1683073 1685278 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.30E-74
3.80E-74
1.60E-08
WP_080632252.1 1686442 1685413 - 342PF01609
PF13546
DDE_Tnp_1
DDE_5
Transposase DDE domain
DDE superfamily endonuclease
9.40E-17
7.00E-10
WP_008942419.1 1686726 1687799 + 357INFERRED GENE---
WP_004961928.1 1687814 1688645 + 276PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.00E-48
2.40E-37
1.60E-13
WP_004961925.1 1689359 1688720 - 212PF01810LysELysE type translocator8.90E-18
WP_004961922.1 1689489 1689969 + 159PF01037
PF13412
PF13404
PF08279
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
HTH domain
8.00E-21
1.00E-17
2.40E-17
3.40E-04
WP_004961920.1 1690239 1690977 + 245PF09347DUF1989Domain of unknown function (DUF1989)2.00E-43
WP_151691045.1 1690994 1691648 + 217PF09347DUF1989Domain of unknown function (DUF1989)1.10E-61
WP_151691046.1 1691651 1695257 + 1201PF02626
PF02786
PF02682
PF00289
PF02785
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Carboxyltransferase domain, subdomain A and B
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carboxyltransferase domain, subdomain C and D
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
3.10E-88
6.80E-65
1.50E-49
4.80E-45
6.20E-31

Results for WP_004044676.1 [Haloferax volcanii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004044668.1 25007 25388 + 126PF19137DUF5820Family of unknown function (DUF5820)4.60E-54
WP_004044669.1 25412 25862 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)1.30E-47
WP_004044670.1 26816 25949 - 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.30E-10
WP_004044671.1 27421 26935 - 161PF03745DUF309Domain of unknown function (DUF309)1.90E-15
WP_004061265.1 28480 28750 + 90INFERRED GENE---
WP_004044673.1 28841 29639 + 265PF00459Inositol_PInositol monophosphatase family1.60E-47
WP_004044674.1 29754 30225 + 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.30E-16
1.30E-16
2.00E-15
5.70E-08
6.20E-07
WP_004044675.1 30359 31478 + 372PF01889DUF63Membrane protein of unknown function DUF631.70E-36
WP_004044676.1 33425 31736 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-57
WP_004044677.1 34303 33475 - 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_004044678.1 34669 35917 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.10E-152
2.80E-10
5.20E-06
WP_004044679.1 36014 36314 + 99PF02680DUF211Uncharacterized ArCR, COG18884.80E-34
WP_004044680.1 36313 36883 + 189PF01988VIT1VIT family2.90E-09
WP_004044681.1 36982 37876 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
6.40E-37
WP_004044682.1 38191 37957 - 77NO PFAM MATCH---
WP_004044683.1 38955 38244 - 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.50E-04
WP_004044684.1 39099 39246 + 48NO PFAM MATCH---

Results for WP_068975935.1 [Acinetobacter wuhouensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_068975943.1 1957163 1957574 + 136PF12680
PF07366
PF13577
SnoaL_2
SnoaL
SnoaL_4
SnoaL-like domain
SnoaL-like polyketide cyclase
SnoaL-like domain
1.60E-15
1.60E-07
3.60E-04
WP_227542590.1 1957579 1959025 + 481PF01266
PF03486
PF13450
PF07992
PF13738
DAO
HI0933_like
NAD_binding_8
Pyr_redox_2
Pyr_redox_3
FAD dependent oxidoreductase
HI0933-like protein
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
3.40E-48
6.40E-05
1.10E-04
1.30E-04
1.30E-04
WP_068975941.1 1959107 1960538 + 476PF00324
PF13520
PF03845
AA_permease
AA_permease_2
Spore_permease
Amino acid permease
Amino acid permease
Spore germination protein
1.10E-112
9.80E-46
5.40E-07
WP_068975940.1 1960599 1961517 + 305PF00892
PF08627
EamA
CRT-like
EamA-like transporter family
CRT-like, chloroquine-resistance transporter-like
2.30E-38
7.20E-05
WP_068975939.1 1961995 1961590 - 134PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
4.40E-17
1.50E-16
2.00E-14
WP_068975938.1 1964537 1962059 - 825PF00122
PF00702
PF00403
PF08282
PF01206
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
TusA
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
Sulfurtransferase TusA
6.20E-54
1.50E-41
4.50E-35
2.40E-07
3.50E-05
WP_130113717.1 1964682 1964883 + 66PF00403HMAHeavy-metal-associated domain1.30E-10
WP_068975936.1 1965231 1966707 + 491PF00171AldedhAldehyde dehydrogenase family4.00E-86
WP_068975935.1 1969013 1966814 - 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-74
1.10E-73
5.90E-09
WP_068976000.1 1969379 1970303 + 307PF00892EamAEamA-like transporter family5.70E-20
WP_068975934.1 1971232 1970344 - 295PF00892
PF05653
EamA
Mg_trans_NIPA
EamA-like transporter family
Magnesium transporter NIPA
5.90E-15
4.20E-05
WP_068975933.1 1971951 1971336 - 204PF00959Phage_lysozymePhage lysozyme9.00E-21
WP_227542591.1 1972505 1972058 - 148PF05194UreE_CUreE urease accessory protein, C-terminal domain1.90E-09
WP_068975931.1 1972866 1973331 + 154PF00582UspUniversal stress protein family7.90E-30
WP_068975930.1 1973363 1973807 + 147PF00582UspUniversal stress protein family1.60E-32
WP_068975929.1 1974094 1973860 - 77NO PFAM MATCH---
WP_068975928.1 1974622 1975096 + 157PF02464CinACompetence-damaged protein1.30E-20

Results for WP_024105707.1 back to top

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Couldn't process WP_024105707.1 Genbank filestream. May be corrupt.

Results for WP_038632092.1 [Yersinia rochesterensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_145591484.1 85885 83599 - 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
9.90E-54
1.40E-19
5.20E-11
WP_032820038.1 86533 86248 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.80E-28
6.00E-07
WP_038632104.1 88267 86593 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.10E-97
2.00E-11
2.20E-06
WP_038632102.1 89128 88435 - 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
3.50E-81
9.60E-07
1.60E-04
3.00E-04
WP_145589022.1 90714 89427 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-148
WP_145591485.1 91898 90812 - 361PF00266Aminotran_5Aminotransferase class-V1.80E-65
WP_145589020.1 92793 92100 - 230PF04239DUF421Protein of unknown function (DUF421)5.80E-16
WP_038632094.1 93976 92938 - 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.50E-62
3.60E-26
WP_038632092.1 94124 95891 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.40E-79
4.30E-64

Results for WP_065044943.1 [Mycobacterium paragordonae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_120794722.1 2530790 2530985 + 64PF03966Trm112pTrm112p-like protein6.10E-10
WP_065161857.1 2531583 2530974 - 202PF17920
PF00440
TetR_C_16
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.60E-25
4.90E-17
WP_231513401.1 2532334 2531584 - 249PF01061
PF12698
PF12679
PF12730
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC2_membrane_4
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 family transporter protein
5.70E-33
2.60E-17
8.20E-09
8.20E-04
WP_120792712.1 2533089 2532336 - 250PF00005
PF13304
PF13191
ABC_tran
AAA_21
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
1.20E-30
1.60E-08
5.90E-04
WP_120794723.1 2533146 2533758 + 203PF02245Pur_DNA_glycoMethylpurine-DNA glycosylase (MPG)7.50E-55
WP_065044946.1 2534633 2533754 - 292PF01758
PF13593
SBF
SBF_like
Sodium Bile acid symporter family
SBF-like CPA transporter family (DUF4137)
5.30E-27
3.70E-15
WP_120792713.1 2534739 2536020 + 426PF00579
PF01479
tRNA-synt_1b
S4
tRNA synthetases class I (W and Y)
S4 domain
2.20E-82
6.60E-05
WP_120792714.1 2537483 2536016 - 488PF07812TfuATfuA-like protein1.00E-42
WP_065044943.1 2538730 2537479 - 416PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.60E-56
WP_120792715.1 2539193 2539544 + 116PF05305DUF732Protein of unknown function (DUF732)6.60E-15
WP_003403850.1 2539744 2540023 + 93INFERRED GENE---
WP_003403850.1 2540689 2540956 + 89INFERRED GENE---
G6N69_RS33560 2541562 2541748 + 62INFERRED GENE---
WP_004266405.1 2542255 2542438 + 61INFERRED GENE---
WP_003403850.1 2542383 2543898 + 505INFERRED GENE---
WP_003403850.1 2544029 2545595 + 522INFERRED GENE---
G6N69_RS11655 2546225 2546447 + 74INFERRED GENE---

Results for WP_004969959.1 [Shigella boydii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001117426.1 5 1442 + 478PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
9.20E-26
7.80E-13
WP_001242666.1 2351 1442 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.50E-32
1.20E-19
WP_001190385.1 2450 3041 + 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
4.60E-38
1.90E-11
WP_000111043.1 3863 3122 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292813.1 6337 4054 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.50E-209
1.60E-43
WP_000642548.1 7249 6391 - 285PF01226Form_Nir_transFormate/nitrite transporter1.20E-74
WP_004969959.1 9415 7654 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-83
7.50E-67
WP_000642852.1 9544 10237 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 10435 11524 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000445231.1 11594 12878 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151

Results for WP_000192987.1 [Bacillus cereus group sp. BfR-BA-01347] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001128581.1 52377 53061 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)2.60E-75
WP_000424502.1 53909 53075 - 277PF11667DUF3267Putative zincin peptidase8.50E-04
WP_000650093.1 54105 54891 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.30E-06
7.80E-04
WP_000861667.1 54910 56146 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
1.10E-22
3.30E-06
WP_000332396.1 56615 56192 - 140PF13157EnasEndospore appendages9.60E-04
WP_001110237.1 56814 58149 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.30E-64
2.30E-20
3.20E-17
3.20E-15
3.00E-10
WP_000996782.1 58309 58720 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001175551.1 60292 58750 - 513PF00881NitroreductaseNitroreductase family7.20E-13
WP_000192987.1 62257 60307 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-84
WP_001061558.1 64173 62253 - 639NO PFAM MATCH---
WP_000569894.1 65557 64297 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
4.10E-13
1.70E-04
WP_000197156.1 68558 65690 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.20E-36
WP_001178294.1 69385 69568 + 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_002181770.1 69700 70063 + 120NO PFAM MATCH---
WP_002158817.1 70079 70327 + 82INFERRED GENE---
WP_001169497.1 70485 71082 + 198PF12870DUF4878Domain of unknown function (DUF4878)2.30E-04
WP_000846650.1 71951 71486 - 154PF16723DUF5065Domain of unknown function (DUF5065)1.40E-04

Results for WP_043584217.1 [Clavibacter sp. A6099] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012039455.1 3049063 3048289 - 257PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
5.60E-29
6.10E-26
WP_043583942.1 3049920 3049122 - 265PF20225
PF13428
DUF6584
TPR_14
Family of unknown function (DUF6584)
Tetratricopeptide repeat
7.70E-05
8.50E-04
WP_043583941.1 3051077 3050048 - 342PF03741TerCIntegral membrane protein TerC family1.70E-47
WP_043583940.1 3052168 3051229 - 312PF07676PD40WD40-like Beta Propeller Repeat8.00E-16
WP_043583939.1 3053217 3052164 - 350PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.10E-45
WP_043584219.1 3054113 3053330 - 260PF12698ABC2_membrane_3ABC-2 family transporter protein6.60E-05
WP_043583937.1 3055066 3054109 - 318PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
3.70E-20
5.60E-06
1.10E-05
WP_043583935.1 3056027 3055058 - 322PF00881NitroreductaseNitroreductase family1.50E-15
WP_043584217.1 3057348 3056085 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-49
WP_043583933.1 3058256 3057344 - 303NO PFAM MATCH---
WP_043583932.1 3058497 3058266 - 76NO PFAM MATCH---
WP_237582052.1 3058657 3059332 + 224PF09588YqaJYqaJ-like viral recombinase domain3.50E-05
WP_043584211.1 3059609 3060566 + 318PF13602
PF00107
PF08240
PF01262
ADH_zinc_N_2
ADH_zinc_N
ADH_N
AlaDh_PNT_C
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
Alanine dehydrogenase/PNT, C-terminal domain
6.90E-27
5.80E-15
1.20E-05
4.30E-04
WP_051629221.1 3061798 3060586 - 403PF00144Beta-lactamaseBeta-lactamase1.20E-54
WP_043583928.1 3062787 3061794 - 330PF00251Glyco_hydro_32NGlycosyl hydrolases family 32 N-terminal domain6.40E-12
WP_012039470.1 3063611 3062786 - 274PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component7.10E-17
WP_181036638.1 3064603 3063610 - 330PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component6.80E-11

Results for WP_051629433.1 [Clavibacter sp. A6099] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043588219.1 0 64853 + 829PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.50E-13
WP_043588221.1 2413 3550 + 378PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.50E-10
WP_119373995.1 3558 5190 + 543NO PFAM MATCH---
WP_051629433.1 5186 7028 + 613PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-70
WP_147362288.1 7024 8098 + 357NO PFAM MATCH---
WP_043588228.1 8094 9798 + 567PF14028
PF00881
Lant_dehydr_C
Nitroreductase
Lantibiotic biosynthesis dehydratase C-term
Nitroreductase family
5.00E-48
3.30E-08
WP_043588230.1 9842 10526 + 227PF00440TetR_NBacterial regulatory proteins, tetR family1.50E-14
WP_255720133.1 10659 10971 + 103PF17761DUF1016_NDUF1016 N-terminal domain1.00E-10
WP_156032230.1 12203 11324 - 292NO PFAM MATCH---
WP_043588233.1 13457 13148 - 102NO PFAM MATCH---
WP_119373996.1 14450 13817 - 210PF10502Peptidase_S26Signal peptidase, peptidase S269.70E-42
WP_237583856.1 17613 16509 - 367PF02687FtsXFtsX-like permease family1.60E-06
WP_051629435.1 18293 17609 - 227PF00005
PF13304
PF13555
ABC_tran
AAA_21
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
9.70E-27
1.80E-06
8.00E-04
WP_043588243.1 20619 20271 - 115PF11774Lsr2Lsr21.90E-38
WP_237583857.1 20730 21141 + 136PF12728HTH_17Helix-turn-helix domain1.30E-15
WP_043588145.1 21871 21187 - 227PF02586SRAPSOS response associated peptidase (SRAP)8.10E-48
WP_043588148.1 22276 22519 + 80PF09954DUF2188Uncharacterized protein conserved in bacteria (DUF2188)5.90E-19
WP_147362290.1 23155 23965 + 269PF19865DUF6338Family of unknown function (DUF6338)1.10E-28
WP_147362291.1 24801 24177 - 207NO PFAM MATCH---
WP_043588154.1 25324 24835 - 162PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
6.80E-14
2.70E-08
WP_043588156.1 26147 25448 - 232NO PFAM MATCH---
WP_043588160.1 26924 27920 + 331PF16289PIN_12PIN domain4.00E-14
WP_147362292.1 28017 28830 + 270PF08797HIRANHIRAN domain5.50E-04
WP_043588162.1 28959 29208 + 82NO PFAM MATCH---
WP_237583858.1 29235 29742 + 168NO PFAM MATCH---
WP_043588164.1 31857 30696 - 386NO PFAM MATCH---
WP_043588246.1 31942 32293 + 116PF09722
PF20432
Xre_MbcA_ParS_C
Xre-like-HTH
Antitoxin Xre/MbcA/ParS C-terminal toxin-binding domain
Antitoxin Xre-like helix-turn-helix domain
1.00E-04
9.70E-04
WP_237583859.1 32349 32856 + 168PF08808RESRES domain6.30E-15
WP_043588166.1 32966 33176 + 69NO PFAM MATCH---
WP_051629425.1 33201 33738 + 178PF02661FicFic/DOC family2.00E-11
WP_051629426.1 34682 33773 - 302PF08843AbiEiiNucleotidyl transferase AbiEii toxin, Type IV TA system2.70E-20
WP_081840997.1 35724 34674 - 349PF13338
PF09407
AbiEi_4
AbiEi_1
Transcriptional regulator, AbiEi antitoxin
AbiEi antitoxin C-terminal domain
1.70E-12
7.10E-06
WP_051629428.1 35978 36467 + 162NO PFAM MATCH---
WP_043588170.1 36867 36525 - 113NO PFAM MATCH---
WP_051629429.1 37219 41647 + 1475PF08751
PF13604
PF13245
PF01443
TrwC
AAA_30
AAA_19
Viral_helicase1
TrwC relaxase
AAA domain
AAA domain
Viral (Superfamily 1) RNA helicase
2.60E-86
1.70E-52
1.30E-11
5.80E-04
WP_043588172.1 41675 42143 + 155NO PFAM MATCH---
WP_043588174.1 42445 43153 + 235NO PFAM MATCH---
WP_147362284.1 43658 43454 - 67NO PFAM MATCH---
WP_051629430.1 44161 43717 - 147PF16259DUF4913Domain of unknown function (DUF4913)1.80E-19
WP_051629431.1 45890 44261 - 542PF12696
PF02534
PF10412
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
TraM recognition site of TraD and TraG
Type IV secretory system Conjugative DNA transfer
Type IV secretion-system coupling protein DNA-binding domain
6.70E-27
1.20E-14
4.30E-04
WP_051629432.1 46844 45941 - 300PF00877NLPC_P60NlpC/P60 family1.60E-16
WP_043588176.1 47464 46990 - 157NO PFAM MATCH---
WP_043588179.1 48651 47469 - 393PF01656CbiACobQ/CobB/MinD/ParA nucleotide binding domain4.80E-05
WP_043588180.1 50073 48660 - 470NO PFAM MATCH---
WP_043588182.1 51689 50159 - 509NO PFAM MATCH---
WP_081840990.1 52938 51681 - 418NO PFAM MATCH---
WP_043588186.1 53717 52934 - 260NO PFAM MATCH---
WP_237583855.1 54055 53713 - 113NO PFAM MATCH---
WP_147362285.1 55081 55810 + 242NO PFAM MATCH---
WP_043588194.1 55814 56525 + 236NO PFAM MATCH---
WP_043588197.1 56883 56565 - 105PF12840
PF13412
PF12802
PF01978
PF01022
HTH_20
HTH_24
MarR_2
TrmB
HTH_5
Helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
Bacterial regulatory protein, arsR family
2.60E-09
2.20E-05
9.00E-05
5.50E-04
6.40E-04
WP_147362286.1 56956 57301 + 114NO PFAM MATCH---
WP_043588201.1 57338 57578 + 79NO PFAM MATCH---
WP_086505275.1 57827 58073 + 81NO PFAM MATCH---
WP_167332606.1 58347 60198 + 616PF13545
PF02082
PF12802
PF01047
HTH_Crp_2
Rrf2
MarR_2
MarR
Crp-like helix-turn-helix domain
Iron-dependent Transcriptional regulator
MarR family
MarR family
2.80E-06
8.40E-05
2.60E-04
8.50E-04
WP_043588209.1 61000 61633 + 210PF13614
PF01656
PF09140
PF10609
PF00448
AAA_31
CbiA
MipZ
ParA
SRP54
AAA domain
CobQ/CobB/MinD/ParA nucleotide binding domain
ATPase MipZ
NUBPL iron-transfer P-loop NTPase
SRP54-type protein, GTPase domain
1.30E-15
1.80E-14
2.10E-12
6.20E-10
6.00E-07
WP_043588211.1 61632 61965 + 110NO PFAM MATCH---
WP_212955433.1 62683 62845 + 53PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.70E-13
WP_043588215.1 62928 63822 + 297PF00005
PF13304
PF13401
PF13604
ABC_tran
AAA_21
AAA_22
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
AAA domain
3.70E-25
1.80E-11
3.70E-04
3.80E-04
WP_043588217.1 63818 64691 + 290PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
1.80E-19
2.70E-11
3.80E-05

Results for WP_071598740.1 back to top

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Couldn't process WP_071598740.1 Genbank filestream. May be corrupt.

Results for WP_063085057.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063085056.1 1424 140 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.10E-150
WP_000057148.1 2583 1494 - 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000642852.1 3474 2781 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_063085057.1 3603 5364 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-82
6.30E-67
WP_000642546.1 5769 6627 + 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001292809.1 6681 8964 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.90E-208
1.60E-43
WP_000111043.1 9155 9896 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
NP_415420.1 9994 10105 + 37INFERRED GENE---
NP_415419.2 10105 10246 + 47INFERRED GENE---

Results for WP_011212469.1 [Legionella pneumophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011212461.1 22578 23145 + 188PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
1.10E-31
5.10E-12
WP_011212462.1 23177 24632 + 484PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
4.30E-28
3.20E-19
WP_011212463.1 25656 24633 - 340PF01978
PF01022
TrmB
HTH_5
Sugar-specific transcriptional regulator TrmB
Bacterial regulatory protein, arsR family
2.00E-06
1.60E-04
WP_011212464.1 25872 25677 - 64NO PFAM MATCH---
WP_011212465.1 26055 27318 + 420NO PFAM MATCH---
WP_021436872.1 27289 28453 + 387PF13535
PF02655
ATP-grasp_4
ATP-grasp_3
ATP-grasp domain
ATP-grasp domain
6.30E-08
1.50E-04
WP_011212467.1 28602 28854 + 83PF02597ThiSThiS family2.70E-06
WP_269569334.1 28858 29881 + 340PF00899
PF02826
ThiF
2-Hacid_dh_C
ThiF family
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
5.50E-50
7.80E-04
WP_011212469.1 29877 30939 + 353PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-34
WP_011212470.1 30931 31966 + 344PF07812TfuATfuA-like protein4.40E-35
WP_011212471.1 32078 32264 + 61NO PFAM MATCH---
WP_011212472.1 32298 32559 + 86PF02599CsrAGlobal regulator protein family8.80E-16
WP_011212473.1 32583 33330 + 248PF05818TraTEnterobacterial TraT complement resistance protein2.50E-71
WP_011212474.1 33423 33768 + 114NO PFAM MATCH---
WP_027229261.1 33887 34286 + 132NO PFAM MATCH---
WP_011212478.1 34297 34621 + 107PF05513TraATraA9.90E-05
WP_011212479.1 34610 34901 + 96PF07178TraLTraL protein7.20E-06

Results for WP_015274844.1 [Brachyspira pilosicoli P43/6/78] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013243876.1 2182734 2181837 - 298PF00701DHDPSDihydrodipicolinate synthetase family3.70E-78
WP_015274838.1 2183214 2184522 + 435PF13088
PF13859
PF02012
BNR_2
BNR_3
BNR
BNR repeat-like domain
BNR repeat-like domain
BNR/Asp-box repeat
7.60E-23
4.70E-08
2.20E-06
WP_015274839.1 2184610 2185882 + 423PF05540Serpulina_VSPSerpulina hyodysenteriae variable surface protein1.40E-48
WP_013243873.1 2186321 2185955 - 121PF06803DUF1232Protein of unknown function (DUF1232)1.60E-08
WP_015274840.1 2186473 2187655 + 393PF07221
PF03663
GlcNAc_2-epim
Glyco_hydro_76
N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
Glycosyl hydrolase family 76
4.50E-50
2.60E-06
WP_015274841.1 2187825 2190603 + 925PF00515
PF07719
PF13414
PF13181
PF13431
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.40E-125
6.50E-108
1.60E-103
2.00E-90
2.00E-55
WP_015274842.1 2190755 2191766 + 336PF00881NitroreductaseNitroreductase family5.20E-15
WP_015274843.1 2191799 2192885 + 361NO PFAM MATCH---
WP_015274844.1 2192940 2194281 + 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.20E-38
WP_014935352.1 2194255 2194908 + 217INFERRED GENE---
WP_015274845.1 2194904 2195645 + 246NO PFAM MATCH---
WP_015274846.1 2195984 2196680 + 231PF00005
PF13304
PF02463
PF13175
PF13476
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
2.50E-30
1.10E-15
3.90E-10
1.30E-07
5.10E-06
WP_015274847.1 2196857 2197574 + 238PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.50E-20
2.50E-11
WP_014935355.1 2197997 2198327 + 109PF03551PadRTranscriptional regulator PadR-like family1.90E-21
WP_015274848.1 2198353 2199004 + 216NO PFAM MATCH---
WP_231849772.1 2199003 2199663 + 219NO PFAM MATCH---
WP_013243861.1 2199753 2200758 + 334NO PFAM MATCH---

Results for WP_020064268.1 back to top

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Couldn't process WP_020064268.1 Genbank filestream. May be corrupt.

Results for WP_076968277.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_068910003.1 [Acinetobacter sp. WCHAc010034] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_068910063.1 128648 128012 - 211PF00440
PF17932
TetR_N
TetR_C_24
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
1.00E-15
8.00E-05
WP_068910061.1 128794 129967 + 390PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
9.80E-38
1.20E-36
4.00E-26
1.50E-13
WP_068910016.1 130001 131603 + 533PF01039Carboxyl_transCarboxyl transferase domain1.40E-150
WP_068910014.1 131615 132410 + 264PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.10E-50
2.10E-31
WP_068910012.1 132429 134421 + 663PF02786
PF00289
PF02785
PF00364
PF13533
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
Carbamoyl-phosphate synthase L chain, ATP binding domain
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
Biotin-requiring enzyme
Biotin-lipoyl like
3.10E-76
2.60E-45
1.60E-36
1.10E-14
1.50E-11
WP_068910010.1 134417 135320 + 300PF00682HMGL-likeHMGL-like1.60E-50
WP_068910008.1 135416 136124 + 235PF01144CoA_transCoenzyme A transferase9.00E-81
WP_068910006.1 136125 136755 + 209PF01144CoA_transCoenzyme A transferase2.60E-42
WP_068910003.1 139033 136822 - 736PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
9.40E-74
3.90E-73
1.50E-08
WP_068910001.1 139871 139691 - 59NO PFAM MATCH---
WP_171404905.1 140158 141730 + 523PF00990
PF02743
PF17201
PF08269
GGDEF
dCache_1
Cache_3-Cache_2
dCache_2
Diguanylate cyclase, GGDEF domain
Cache domain
Cache 3/Cache 2 fusion domain
Cache domain
9.70E-44
5.00E-18
9.00E-07
7.70E-04
WP_162898118.1 141817 141970 + 50NO PFAM MATCH---
WP_068909999.1 142742 142016 - 241PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
1.70E-28
4.50E-20
WP_068910059.1 145409 142751 - 885PF02702
PF02518
PF13493
PF00512
KdpD
HATPase_c
DUF4118
HisKA
Osmosensitive K+ channel His kinase sensor domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Domain of unknown function (DUF4118)
His Kinase A (phospho-acceptor) domain
2.80E-93
2.10E-20
1.00E-18
9.20E-13
WP_068909996.1 146118 145518 - 199PF02669KdpCK+-transporting ATPase, c chain9.10E-67
WP_068909994.1 148195 146128 - 688PF00702
PF00122
PF08282
Hydrolase
E1-E2_ATPase
Hydrolase_3
haloacid dehalogenase-like hydrolase
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
4.20E-37
8.90E-29
5.00E-06
WP_068909992.1 149933 148208 - 574PF03814KdpAPotassium-transporting ATPase A subunit8.70E-208

Results for WP_076967367.1 [Streptomyces sp. IB2014 011-12] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018515646.1 123673 123850 + 58NO PFAM MATCH---
WP_030568650.1 125877 123930 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-81
WP_030568648.1 126629 125873 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
1.90E-29
2.00E-20
5.30E-04
WP_179115522.1 127642 126682 - 319PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.90E-28
6.70E-15
1.50E-05
6.20E-05
WP_076967370.1 128787 127683 - 367PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
5.30E-06
7.10E-04
WP_076967369.1 129857 128783 - 357PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.00E-94
WP_076967368.1 132565 129853 - 903PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-48
WP_076967434.1 134164 132580 - 527PF00881NitroreductaseNitroreductase family3.20E-18
WP_076967367.1 136212 134250 - 653PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-81
WP_076967366.1 138556 136201 - 784NO PFAM MATCH---
WP_076967433.1 140436 138561 - 624PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
8.10E-36
4.80E-08
1.20E-07
8.30E-07
WP_076967365.1 140783 140486 - 98NO PFAM MATCH---
WP_030568633.1 143753 141167 - 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.90E-37
3.00E-21
WP_026242141.1 144538 143749 - 262PF00005
PF02463
PF13304
PF13555
PF03193
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RsgA GTPase
3.20E-32
1.20E-06
1.90E-05
5.30E-05
2.90E-04
WP_076967364.1 144938 145562 + 207PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.90E-22
WP_256859152.1 145848 147351 + 500PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
4.50E-51
3.70E-16
2.30E-11
WP_076967362.1 147970 147373 - 198PF08006DUF1700Protein of unknown function (DUF1700)1.00E-04

Results for WP_076967366.1 [Streptomyces sp. IB2014 011-12] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_030568650.1 125877 123930 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-81
WP_030568648.1 126629 125873 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
1.90E-29
2.00E-20
5.30E-04
WP_179115522.1 127642 126682 - 319PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.90E-28
6.70E-15
1.50E-05
6.20E-05
WP_076967370.1 128787 127683 - 367PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
5.30E-06
7.10E-04
WP_076967369.1 129857 128783 - 357PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.00E-94
WP_076967368.1 132565 129853 - 903PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-48
WP_076967434.1 134164 132580 - 527PF00881NitroreductaseNitroreductase family3.20E-18
WP_076967367.1 136212 134250 - 653PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-81
WP_076967366.1 138556 136201 - 784NO PFAM MATCH---
WP_076967433.1 140436 138561 - 624PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
8.10E-36
4.80E-08
1.20E-07
8.30E-07
WP_076967365.1 140783 140486 - 98NO PFAM MATCH---
WP_030568633.1 143753 141167 - 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.90E-37
3.00E-21
WP_026242141.1 144538 143749 - 262PF00005
PF02463
PF13304
PF13555
PF03193
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RsgA GTPase
3.20E-32
1.20E-06
1.90E-05
5.30E-05
2.90E-04
WP_076967364.1 144938 145562 + 207PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.90E-22
WP_256859152.1 145848 147351 + 500PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
4.50E-51
3.70E-16
2.30E-11
WP_076967362.1 147970 147373 - 198PF08006DUF1700Protein of unknown function (DUF1700)1.00E-04
WP_015609040.1 148341 147966 - 124PF03551PadRTranscriptional regulator PadR-like family2.20E-25

Results for WP_030568650.1 [Streptomyces sp. IB2014 011-12] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076967373.1 115632 114852 - 259PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.30E-20
7.20E-15
WP_076967438.1 116168 115628 - 179PF07702UTRAUTRA domain2.00E-24
WP_076967372.1 116311 116704 + 130PF13581HATPase_c_2Histidine kinase-like ATPase domain3.20E-12
WP_076967371.1 120315 116781 - 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.20E-31
1.70E-24
5.20E-21
4.90E-16
2.90E-15
WP_079251399.1 120825 121821 + 331PF00196GerEBacterial regulatory proteins, luxR family2.60E-05
WP_030568654.1 122133 121869 - 87NO PFAM MATCH---
WP_076967436.1 123389 122129 - 419PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
6.60E-23
1.90E-09
WP_018515646.1 123673 123850 + 58NO PFAM MATCH---
WP_030568650.1 125877 123930 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-81
WP_030568648.1 126629 125873 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
1.90E-29
2.00E-20
5.30E-04
WP_179115522.1 127642 126682 - 319PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.90E-28
6.70E-15
1.50E-05
6.20E-05
WP_076967370.1 128787 127683 - 367PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
5.30E-06
7.10E-04
WP_076967369.1 129857 128783 - 357PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.00E-94
WP_076967368.1 132565 129853 - 903PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-48
WP_076967434.1 134164 132580 - 527PF00881NitroreductaseNitroreductase family3.20E-18
WP_076967367.1 136212 134250 - 653PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-81
WP_076967366.1 138556 136201 - 784NO PFAM MATCH---

Results for WP_038269274.1 [Xenorhabdus cabanillasii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_115827343.1 4017872 4015466 - 801PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
5.10E-47
4.40E-21
5.20E-06
3.40E-05
WP_038269281.1 4018397 4018106 - 96PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.50E-29
3.30E-08
WP_038269280.1 4020144 4018470 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.10E-98
2.40E-11
1.60E-05
WP_038269279.1 4021025 4020338 - 228PF02224
PF13189
PF13671
PF13207
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_33
AAA_17
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
1.70E-79
1.10E-06
4.60E-05
7.30E-05
1.10E-04
WP_115827344.1 4022533 4021249 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-144
WP_038269277.1 4023721 4022632 - 362PF00266Aminotran_5Aminotransferase class-V9.00E-64
WP_115827345.1 4024087 4027144 + 1018PF00501
PF07993
PF01370
PF00550
PF01073
AMP-binding
NAD_binding_4
Epimerase
PP-binding
3Beta_HSD
AMP-binding enzyme
Male sterility protein
NAD dependent epimerase/dehydratase family
Phosphopantetheine attachment site
3-beta hydroxysteroid dehydrogenase/isomerase family
1.40E-79
1.30E-59
3.60E-14
1.80E-10
2.00E-08
WP_115827346.1 4028254 4027210 - 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
2.80E-58
1.40E-25
WP_038269274.1 4028403 4030173 + 589PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.80E-82
6.40E-66
WP_115827347.1 4030498 4031350 + 283PF01226Form_Nir_transFormate/nitrite transporter9.60E-75
WP_115827348.1 4031413 4033696 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.50E-205
1.50E-43
WP_115827349.1 4033834 4034575 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-30
5.70E-18
1.20E-05
WP_244922779.1 4035166 4035844 + 225NO PFAM MATCH---
WP_051502334.1 4035994 4036468 + 157PF13551
PF13384
PF13518
HTH_29
HTH_23
HTH_28
Winged helix-turn helix
Homeodomain-like domain
Helix-turn-helix domain
3.10E-11
5.40E-08
7.20E-04
WP_084766466.1 4036461 4036998 + 178PF13358DDE_3DDE superfamily endonuclease2.20E-31
WP_115827350.1 4038558 4037268 - 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.60E-35
1.00E-29
WP_115827351.1 4040064 4038720 - 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
5.50E-65
1.50E-21
8.60E-16
2.70E-14
2.50E-06

Results for WP_033640817.1 [Serratia marcescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021504329.1 97458 95709 - 582PF00664
PF00005
PF02463
PF03193
PF00270
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
RsgA GTPase
DEAD/DEAH box helicase
4.00E-58
4.40E-36
3.40E-09
8.10E-06
1.30E-05
WP_082172236.1 99764 97493 - 756PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
3.70E-50
5.00E-18
4.80E-10
9.20E-04
WP_004928264.1 100327 100042 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.60E-28
4.00E-07
6.30E-04
WP_004928267.1 102063 100389 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.40E-99
1.00E-11
8.90E-07
WP_028127992.1 102937 102247 - 229PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
9.00E-83
4.20E-08
1.40E-05
9.80E-05
WP_243811095.1 104486 103199 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-148
WP_028127991.1 105685 104599 - 361PF00266Aminotran_5Aminotransferase class-V4.40E-65
WP_016928322.1 107034 105987 - 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.20E-63
6.70E-26
WP_033640817.1 107182 108946 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.40E-83
2.50E-66
WP_004928284.1 109408 110269 + 286PF01226Form_Nir_transFormate/nitrite transporter6.70E-74
WP_016928324.1 110323 112606 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.10E-208
2.00E-43
WP_031299859.1 112887 113628 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-29
1.60E-18
1.00E-05
WP_265260023.1 114828 113676 - 383PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
1.70E-35
1.40E-12
3.80E-07
3.20E-05
WP_243811093.1 114991 115357 + 121PF08818
PF18899
DUF1801
DUF5655
Domain of unknown function (DU1801)
Domain of unknown function (DUF5655)
1.80E-12
9.50E-07
WP_016928328.1 116704 115411 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
3.60E-36
5.10E-30
WP_013201517.1 116813 118099 + 428INFERRED GENE---
WP_015377319.1 118778 118166 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
3.40E-59
1.70E-05

Results for WP_003359773.1 [Clostridium botulinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003359769.1 352 526 + 57NO PFAM MATCH---
WP_003359770.1 690 1647 + 318PF00881NitroreductaseNitroreductase family1.40E-20
WP_003359771.1 1650 2733 + 360NO PFAM MATCH---
WP_003359773.1 2748 4107 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-47
WP_003359774.1 4081 4720 + 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.10E-11
WP_003359775.1 4727 5456 + 242PF19393DUF5968Family of unknown function (DUF5968)9.00E-68
WP_003359776.1 5799 6732 + 310PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
3.40E-35
2.80E-10
3.80E-04
WP_003359777.1 6743 7868 + 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
6.40E-34
1.10E-22
3.50E-14
1.10E-04
WP_012720553.1 7869 9012 + 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
4.20E-36
1.00E-24
1.20E-12
WP_003359779.1 9386 10037 + 216PF02163Peptidase_M50Peptidase family M509.70E-12
WP_024931682.1 10600 10114 - 161NO PFAM MATCH---
WP_003355784.1 11980 10717 - 420PF03600
PF00939
PF02040
PF06450
CitMHS
Na_sulph_symp
ArsB
NhaB
Citrate transporter
Sodium:sulfate symporter transmembrane region
Arsenical pump membrane protein
Bacterial Na+/H+ antiporter B (NhaB)
1.90E-57
1.30E-24
4.40E-23
3.10E-06

Results for WP_002931225.1 [Thauera sp. 28] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002931216.1 38670 36402 - 755PF00580
PF13361
PF13245
PF13604
PF13538
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
UvrD/REP helicase N-terminal domain
UvrD-like helicase C-terminal domain
AAA domain
AAA domain
UvrD-like helicase C-terminal domain
1.50E-55
1.30E-42
8.10E-30
3.90E-11
3.00E-09
WP_002931218.1 40461 38727 - 577PF00990
PF07695
PF07696
GGDEF
7TMR-DISM_7TM
7TMR-DISMED2
Diguanylate cyclase, GGDEF domain
7TM diverse intracellular signalling
7TMR-DISM extracellular 2
4.10E-42
1.50E-29
1.40E-16
WP_002931219.1 40758 41553 + 264PF00656Peptidase_C14Caspase domain1.70E-35
WP_198291908.1 42127 41545 - 193PF12697
PF00561
PF12146
PF00975
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Thioesterase
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Thioesterase domain
1.60E-07
2.10E-07
1.40E-06
3.00E-04
WP_002931221.1 43479 42213 - 421PF06808DctMTripartite ATP-independent periplasmic transporter, DctM component1.70E-109
WP_002931222.1 44003 43475 - 175PF04290DctQTripartite ATP-independent periplasmic transporters, DctQ component6.80E-29
WP_002931223.1 45020 44006 - 337PF03480DctPBacterial extracellular solute-binding protein, family 77.20E-84
WP_002931224.1 46034 45134 - 299PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
3.70E-30
3.20E-07
WP_002931225.1 46255 48454 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.00E-74
6.80E-71
7.90E-08
WP_002931226.1 48450 49212 + 253PF13531
PF03466
PF01547
SBP_bac_11
LysR_substrate
SBP_bac_1
Bacterial extracellular solute-binding protein
LysR substrate binding domain
Bacterial extracellular solute-binding protein
1.60E-44
7.90E-06
2.30E-05
WP_002931227.1 49230 49920 + 229PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component8.30E-17
WP_232433294.1 49921 51136 + 404PF00005
PF03459
PF13304
ABC_tran
TOBE
AAA_21
ABC transporter
TOBE domain
AAA domain, putative AbiEii toxin, Type IV TA system
3.10E-26
8.50E-15
8.40E-07
WP_037984827.1 52852 51143 - 568PF13604
PF13245
PF13538
PF13086
PF05127
AAA_30
AAA_19
UvrD_C_2
AAA_11
Helicase_RecD
AAA domain
AAA domain
UvrD-like helicase C-terminal domain
AAA domain
Helicase
3.40E-34
8.80E-27
8.50E-15
1.30E-10
7.90E-10

Results for WP_069722024.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_069722022.1 346124 346988 + 287PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
4.20E-119
7.70E-04
WP_001643647.1 347337 348486 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.40E-25
1.00E-08
3.20E-07
2.60E-04
WP_001134264.1 348703 350125 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000067928.1 351214 350416 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 351332 351659 + 109INFERRED GENE---
WP_001643655.1 351789 352749 + 319PF11047SopDSalmonella outer protein D1.70E-180
WP_069722023.1 355103 352820 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-208
4.80E-44
WP_000642539.1 356020 355162 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_069722024.1 358185 356424 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-82
2.70E-64
WP_000642868.1 358321 359014 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_069722025.1 359199 360288 + 362PF00266Aminotran_5Aminotransferase class-V1.60E-70
WP_023251631.1 360358 361642 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.20E-151
WP_000792301.1 361785 362547 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 362719 363403 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 363516 365190 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 365345 365630 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_069722026.1 365859 368124 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.30E-53
1.50E-14
3.40E-07

Results for WP_070801990.1 [Salmonella enterica subsp. diarizonae serovar 16:z10:e,n,x,z15] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_309009.1 9652 10276 + 208INFERRED GENE---
WP_000109276.1 10587 11736 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-25
9.80E-09
3.80E-07
2.00E-04
WP_070801957.1 11953 13375 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.80E-28
1.00E-13
WP_023247070.1 14312 13514 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.80E-31
2.20E-18
2.80E-06
NP_459946.1 14430 14767 + 112INFERRED GENE---
NP_459947.1 14898 15857 + 319INFERRED GENE---
WP_023247068.1 18212 15929 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.60E-208
4.80E-44
WP_023247067.1 19127 18269 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_070801990.1 21291 19530 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.30E-82
9.30E-65
WP_070801959.1 21427 22120 + 230PF04239DUF421Protein of unknown function (DUF421)1.00E-15
WP_070801960.1 22305 23394 + 362PF00266Aminotran_5Aminotransferase class-V6.20E-69
WP_053509616.1 23464 24748 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-150
WP_000125003.1 24989 25673 + 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-85
1.80E-07
2.50E-04
7.50E-04
WP_000140319.1 25786 27460 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000167332.1 27616 27901 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_053530133.1 28113 30378 + 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
6.70E-52
3.80E-16
1.70E-07
6.40E-04
WP_023247060.1 30414 32163 + 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
1.60E-60
2.00E-36
2.20E-10
1.70E-05
3.30E-05

Results for WP_016715737.1 [Pseudomonas monteilii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016715729.1 2180847 2181165 + 105NO PFAM MATCH---
WP_016715730.1 2181173 2181374 + 66PF06945DUF1289Protein of unknown function (DUF1289)1.40E-15
WP_016715731.1 2181425 2182067 + 213PF01810LysELysE type translocator1.10E-30
WP_003256028.1 2182185 2182632 + 149INFERRED GENE---
WP_016715733.1 2183676 2182653 - 340PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
2.00E-35
4.80E-23
WP_025754485.1 2185032 2183688 - 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
5.40E-26
1.10E-22
WP_182363344.1 2187300 2185050 - 749PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
2.00E-33
3.10E-30
2.50E-04
WP_016715736.1 2187755 2187299 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.70E-22
2.00E-07
5.50E-05
WP_016715737.1 2188000 2190187 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.10E-73
1.50E-71
3.20E-08
WP_028699604.1 2190437 2191253 + 271PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
8.00E-22
2.00E-21
1.60E-15
4.70E-13
1.70E-08
WP_235200524.1 2192115 2191236 - 292PF20455DUF6708Family of unknown function (DUF6708)1.10E-05
WP_235200525.1 2195108 2192117 - 996PF20249VasX_NVasX toxin N-terminal region1.40E-21
WP_029380311.1 2196033 2195100 - 310PF13503DUF4123Domain of unknown function (DUF4123)3.30E-12
WP_016714375.1 2198198 2196029 - 722PF05954
PF04717
PF06715
Phage_GPD
Phage_base_V
Gp5_C
Phage tail baseplate hub (GPD)
Type VI secretion system/phage-baseplate injector OB domain
Gp5 C-terminal repeat (3 copies)
1.50E-65
7.70E-13
3.00E-05
WP_016714374.1 2198788 2198272 - 171PF05638T6SS_HCPType VI secretion system effector, Hcp8.70E-34
WP_016714373.1 2199784 2198920 - 287PF09850DotUType VI secretion system protein DotU3.60E-61
WP_235200526.1 2201123 2199785 - 445PF05936T6SS_VasEBacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE3.70E-145

Results for WP_064548237.1 [Buttiauxella sp. S19-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_064548253.1 33214 34507 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.00E-37
9.40E-32
WP_237930129.1 34863 37308 + 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.60E-106
5.10E-29
1.00E-17
WP_064548249.1 37318 37936 + 205PF13247
PF12797
PF00037
PF13187
PF12837
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_6
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
2.20E-27
2.60E-13
4.90E-13
2.30E-12
3.50E-11
WP_232886482.1 37937 38798 + 286PF04976DmsCDMSO reductase anchor subunit (DmsC)1.00E-104
WP_237930131.1 39086 40235 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.50E-32
6.20E-12
3.30E-07
3.20E-04
WP_064548243.1 41008 40267 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.60E-32
8.20E-19
2.80E-06
WP_064548240.1 43490 41207 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.30E-203
5.30E-44
WP_064548239.1 44401 43543 - 285PF01226Form_Nir_transFormate/nitrite transporter1.60E-73
WP_064548237.1 46565 44807 - 585PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.60E-83
1.10E-67
WP_064548235.1 46703 47396 + 230PF04239DUF421Protein of unknown function (DUF421)4.10E-15
WP_237930136.1 47557 48643 + 361PF00266Aminotran_5Aminotransferase class-V5.00E-66
WP_121815660.1 48722 50006 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)8.40E-148
WP_064548231.1 50191 50950 + 252PF01435Peptidase_M48Peptidase family M482.40E-26
WP_064548229.1 51129 51816 + 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
7.50E-84
9.80E-08
1.40E-05
1.90E-04
6.60E-04
WP_034456368.1 52011 53688 + 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.80E-97
2.40E-11
4.30E-07
WP_034456367.1 53779 54067 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.30E-29
1.10E-07
1.70E-04
WP_237930169.1 54347 56540 + 730PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
4.60E-55
4.30E-17
7.60E-04
7.80E-04

Results for WP_001538156.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_015504295.1 [Candidatus Methanomethylophilus alvus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015504287.1 357772 358819 + 348PF02371
PF01548
Transposase_20
DEDD_Tnp_IS110
Transposase IS116/IS110/IS902 family
Transposase
2.30E-16
3.10E-06
WP_015504288.1 360068 359150 - 305PF00185
PF02729
OTCace
OTCace_N
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
5.10E-54
8.20E-45
WP_015504289.1 360180 360894 + 237PF02596DUF169Uncharacterised ArCR, COG20434.10E-45
WP_015504290.1 361184 362513 + 442PF02241
PF02783
MCR_beta
MCR_beta_N
Methyl-coenzyme M reductase beta subunit, C-terminal domain
Methyl-coenzyme M reductase beta subunit, N-terminal domain
8.50E-135
5.50E-77
WP_022532232.1 362531 362957 + 141PF02505MCR_DMethyl-coenzyme M reductase operon protein D1.40E-31
WP_015504292.1 362959 363736 + 258PF02240MCR_gammaMethyl-coenzyme M reductase gamma subunit9.50E-131
WP_015504293.1 363737 365402 + 554PF02745
PF02249
MCR_alpha_N
MCR_alpha
Methyl-coenzyme M reductase alpha subunit, N-terminal domain
Methyl-coenzyme M reductase alpha subunit, C-terminal domain
2.90E-142
6.90E-61
WP_015504294.1 365408 365687 + 92PF09871DUF2098Uncharacterized protein conserved in archaea (DUF2098)5.60E-24
WP_015504295.1 367065 365832 - 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.30E-83
WP_015504296.1 367806 367140 - 221PF19700DUF6198Family of unknown function (DUF6198)1.60E-13
WP_015504297.1 368536 367927 - 202NO PFAM MATCH---
WP_015504298.1 369551 368585 - 321PF09884
PF14544
DUF2111
DUF4443
Uncharacterized protein conserved in archaea (DUF2111)
Domain of unknown function (DUF4443)
1.40E-31
7.20E-29
WP_015504299.1 369756 371373 + 538PF00005
PF03193
PF13555
PF13401
PF13604
ABC_tran
RsgA_GTPase
AAA_29
AAA_22
AAA_30
ABC transporter
RsgA GTPase
P-loop containing region of AAA domain
AAA domain
AAA domain
9.40E-49
3.70E-05
4.50E-05
3.30E-04
5.90E-04
WP_015504300.1 371386 372007 + 206PF04609MCR_CMethyl-coenzyme M reductase operon protein C1.50E-06
WP_015504301.1 372003 373515 + 503NO PFAM MATCH---
WP_015504302.1 373511 373937 + 141PF09875DUF2102Uncharacterized protein conserved in archaea (DUF2102)2.80E-39
WP_015504303.1 373933 374371 + 145PF09885DUF2112Uncharacterized protein conserved in archaea (DUF2112)9.10E-64

Results for WP_057532375.1 [Yersinia pseudotuberculosis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002211322.1 65439 65154 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.40E-28
6.00E-07
WP_011192057.1 67173 65499 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.80E-07
WP_002211324.1 68039 67346 - 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
3.20E-81
2.80E-07
6.10E-05
8.90E-05
WP_011192056.1 69638 68351 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.90E-149
WP_012105382.1 70901 69815 - 361PF00266Aminotran_5Aminotransferase class-V4.10E-66
WP_050309719.1 73115 71267 - 615PF03895YadA_anchorYadA-like membrane anchor domain1.20E-07
WP_012105384.1 74230 73135 - 364PF03895
PF05662
YadA_anchor
YadA_stalk
YadA-like membrane anchor domain
Coiled stalk of trimeric autotransporter adhesin
2.10E-07
5.30E-06
WP_050309718.1 75586 74548 - 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.10E-61
2.10E-25
WP_057532375.1 75734 77501 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.70E-82
4.30E-63
WP_050557605.1 78219 79035 + 271PF01226Form_Nir_transFormate/nitrite transporter2.80E-74
WP_002211332.1 79090 81373 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.50E-206
1.40E-43
WP_002211333.1 82165 81490 - 224PF01755
PF20047
Glyco_transf_25
DUF6449
Glycosyltransferase family 25 (LPS biosynthesis protein)
Domain of unknown function (DUF6449)
4.90E-11
1.00E-04
WP_002430094.1 83088 83886 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.80E-31
1.90E-18
5.10E-06
WP_002211335.1 85188 84039 - 382PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
9.90E-30
2.00E-09
1.30E-08
3.10E-05
WP_002211336.1 86727 85434 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
4.90E-36
2.80E-30
WP_002211337.1 88303 86968 - 444PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
2.20E-63
6.00E-22
2.80E-16
7.60E-13
8.00E-07
WP_207993703.1 88931 88322 - 202PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
7.40E-58
4.10E-05

Results for WP_002211330.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000192959.1 [Bacillus cereus group sp. TH41-1LC] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049772327.1 37723 37408 - 104NO PFAM MATCH---
WP_000101451.1 39385 38029 - 451PF01385
PF07282
OrfB_IS605
OrfB_Zn_ribbon
Probable transposase
Putative transposase DNA-binding domain
2.00E-18
3.00E-06
WP_001178301.1 40090 39907 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109906.1 40496 40118 - 125NO PFAM MATCH---
WP_000428510.1 40708 40498 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_000197153.1 41533 44401 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.90E-63
5.10E-55
6.30E-37
WP_000569908.1 44534 45791 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
3.70E-13
1.60E-04
WP_000067620.1 45915 47835 + 639NO PFAM MATCH---
WP_000192959.1 47831 49781 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-83
WP_001175520.1 49797 51339 + 513PF00881NitroreductaseNitroreductase family6.20E-12
WP_000025740.1 51431 52022 + 196PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.30E-17
1.00E-16
2.70E-15
1.50E-10
2.20E-10
WP_000996791.1 52465 52054 - 136PF13048DUF3908Protein of unknown function (DUF3908)3.80E-52
WP_000470981.1 53101 52609 - 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.20E-11
3.10E-07
1.20E-05
WP_001110200.1 54538 53203 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
6.70E-64
2.30E-20
4.00E-17
3.30E-15
1.80E-10
WP_000332405.1 54737 55169 + 143NO PFAM MATCH---
WP_017672808.1 55212 55439 + 75INFERRED GENE---
WP_000649878.1 56301 55515 - 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.90E-05
1.20E-04

Results for WP_057025584.1 [Pseudomonas synxantha] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043046713.1 2331797 2332892 + 364PF00005
PF08402
ABC_tran
TOBE_2
ABC transporter
TOBE domain
2.50E-24
6.80E-04
WP_057025580.1 2332891 2333989 + 365PF00005
PF17912
PF08402
PF13555
PF03193
ABC_tran
OB_MalK
TOBE_2
AAA_29
RsgA_GTPase
ABC transporter
MalK OB fold domain
TOBE domain
P-loop containing region of AAA domain
RsgA GTPase
1.90E-21
3.90E-08
5.50E-06
3.70E-05
4.90E-04
WP_005789024.1 2333985 2334852 + 288PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.40E-15
WP_003174634.1 2334862 2335663 + 266PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.40E-11
WP_003232363.1 2335674 2335947 + 90PF09928DUF2160Predicted small integral membrane protein (DUF2160)2.60E-38
WP_057025581.1 2335979 2337722 + 580NO PFAM MATCH---
WP_057025582.1 2338637 2337767 - 289PF00561
PF12146
PF12697
PF03096
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
Ndr
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
Ndr family
5.50E-23
9.90E-10
1.80E-08
5.30E-04
WP_057025583.1 2339356 2338633 - 240PF13649
PF08241
Methyltransf_25
Methyltransf_11
Methyltransferase domain
Methyltransferase domain
4.30E-07
1.50E-05
WP_057025584.1 2340768 2339526 - 413PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-35
WP_255320523.1 2340939 2340816 - 40NO PFAM MATCH---
WP_057025585.1 2341481 2342861 + 459PF14518Haem_oxygenas_2Iron-containing redox enzyme2.90E-28
WP_057025586.1 2342872 2343817 + 314PF05175
PF13847
PF13649
PF06325
PF01170
MTS
Methyltransf_31
Methyltransf_25
PrmA
UPF0020
Methyltransferase small domain
Methyltransferase domain
Methyltransferase domain
Ribosomal protein L11 methyltransferase (PrmA)
Putative RNA methylase family UPF0020
5.20E-19
2.30E-11
5.40E-09
5.60E-09
1.90E-06
WP_057025587.1 2343822 2344941 + 372PF04107GCS2Glutamate-cysteine ligase family 2(GCS2)1.70E-58
WP_043046718.1 2345025 2346273 + 415PF08240
PF13823
PF00107
ADH_N
ADH_N_assoc
ADH_zinc_N
Alcohol dehydrogenase GroES-like domain
Alcohol dehydrogenase GroES-associated
Zinc-binding dehydrogenase
4.80E-29
2.30E-10
4.40E-09
WP_056846517.1 2346808 2346376 - 143NO PFAM MATCH---
WP_057025588.1 2347876 2347087 - 262PF12833
PF00165
PF02311
PF07883
PF14525
HTH_18
HTH_AraC
AraC_binding
Cupin_2
AraC_binding_2
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-like ligand binding domain
Cupin domain
AraC-binding-like domain
7.80E-22
4.50E-13
1.40E-09
4.40E-05
1.60E-04
WP_056846515.1 2347961 2348960 + 332PF13593
PF01758
SBF_like
SBF
SBF-like CPA transporter family (DUF4137)
Sodium Bile acid symporter family
1.90E-96
1.10E-13

Results for WP_035684851.1 [Avibacterium paragallinarum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_035684839.1 892125 891057 - 355PF03739LptF_LptGLipopolysaccharide export system permease LptF/LptG1.40E-81
WP_206537112.1 893247 892149 - 365PF03739LptF_LptGLipopolysaccharide export system permease LptF/LptG3.60E-67
WP_035684840.1 893356 894841 + 494PF00883
PF02789
Peptidase_M17
Peptidase_M17_N
Cytosol aminopeptidase family, catalytic domain
Cytosol aminopeptidase family, N-terminal domain
7.60E-121
1.60E-33
WP_046097390.1 895265 894920 - 114PF00593TonB_dep_RecTonB dependent receptor3.60E-10
WP_035684842.1 895391 895904 + 170PF03929
PF16357
PepSY_TM
PepSY_TM_like_2
PepSY-associated TM region
Putative PepSY_TM-like
6.50E-08
1.20E-07
WP_035684844.1 897251 895946 - 434PF05201
PF01488
PF00745
PF03435
GlutR_N
Shikimate_DH
GlutR_dimer
Sacchrp_dh_NADP
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
Saccharopine dehydrogenase NADP binding domain
1.50E-50
9.00E-47
7.70E-21
7.20E-05
WP_046097389.1 898100 897398 - 233PF16123
PF00753
PF12706
PF16661
HAGH_C
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily domain
6.70E-16
1.50E-15
5.00E-07
5.50E-06
WP_035684848.1 898117 898849 + 243PF08241
PF01209
PF13649
Methyltransf_11
Ubie_methyltran
Methyltransf_25
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
2.80E-09
3.70E-06
1.40E-05
WP_035684851.1 898955 900725 + 589PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.30E-81
1.30E-67
WP_035684853.1 900859 901282 + 140PF06295DUF1043Protein of unknown function (DUF1043)4.10E-41
WP_035684855.1 901444 902575 + 376PF00268Ribonuc_red_smRibonucleotide reductase, small chain3.40E-48
WP_081637498.1 902942 902615 - 108PF01381
PF12844
HTH_3
HTH_19
Helix-turn-helix
Helix-turn-helix domain
8.70E-07
1.20E-05
WP_035684858.1 904249 902941 - 435PF07804HipA_CHipA-like C-terminal domain5.60E-26
WP_035684861.1 904597 904348 - 82PF00111Fer22Fe-2S iron-sulfur cluster binding domain4.10E-11
WP_035684866.1 906684 905871 - 270PF05173
PF01113
DapB_C
DapB_N
Dihydrodipicolinate reductase, C-terminus
Dihydrodipicolinate reductase, N-terminus
5.30E-44
1.20E-42
WP_035684869.1 907334 906698 - 211PF01810
PF03741
LysE
TerC
LysE type translocator
Integral membrane protein TerC family
7.50E-40
3.30E-05
WP_017806513.1 907846 907345 - 166PF04608PgpAPhosphatidylglycerophosphatase A7.00E-39

Results for WP_030535883.1 [Rhodococcus sp. BH5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_270008820.1 175940 174701 - 412PF02720
PF01844
DUF222
HNH
Domain of unknown function (DUF222)
HNH endonuclease
3.50E-31
9.50E-07
WP_270008821.1 176650 176032 - 205PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
2.10E-20
3.40E-20
3.90E-04
WP_003943587.1 177849 176646 - 400PF07730
PF02518
PF13581
HisKA_3
HATPase_c
HATPase_c_2
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
1.70E-15
5.80E-07
6.80E-04
WP_039973533.1 177963 179010 + 348PF02687FtsXFtsX-like permease family2.50E-11
WP_003943539.1 179006 179747 + 246PF00005
PF02463
PF13604
PF13304
PF13555
ABC_tran
SMC_N
AAA_30
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
2.30E-32
2.80E-10
2.40E-07
6.30E-07
7.70E-06
WP_003943598.1 179858 180299 + 146PF13426
PF13188
PF00989
PF08448
PAS_9
PAS_8
PAS
PAS_4
PAS domain
PAS domain
PAS fold
PAS fold
9.00E-10
1.40E-07
6.10E-07
9.20E-07
WP_003943606.1 180932 180305 - 208PF00440TetR_NBacterial regulatory proteins, tetR family2.70E-12
WP_037130941.1 180983 181955 + 323PF04321RmlD_sub_bindRmlD substrate binding domain2.00E-04
WP_030535883.1 183194 181901 - 430PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-44
WP_064688025.1 184531 183190 - 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-54
WP_050657051.1 185954 184523 - 476PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
2.90E-26
2.30E-08
WP_047272718.1 186763 185950 - 270NO PFAM MATCH---
WP_047272767.1 187046 186857 - 62NO PFAM MATCH---
WP_054827487.1 187138 188398 + 419PF05977
PF07690
MFS_3
MFS_1
Transmembrane secretion effector
Major Facilitator Superfamily
2.00E-31
6.10E-17
WP_162114201.1 188482 189550 + 355PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
7.80E-96
6.90E-05
WP_047272721.1 189546 190341 + 264PF00005
PF13304
PF02463
PF13191
PF13175
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
4.20E-29
4.60E-12
6.30E-07
1.80E-05
6.20E-05
WP_063315292.1 190337 191318 + 326PF01497Peripla_BP_2Periplasmic binding protein2.20E-22

Results for WP_030535882.1 [Rhodococcus qingshengii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003943536.1 103571 102953 - 205PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
1.00E-20
3.40E-20
1.20E-04
WP_125050154.1 104770 103567 - 400PF07730
PF02518
PF13581
HisKA_3
HATPase_c
HATPase_c_2
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
1.70E-15
5.80E-07
6.80E-04
WP_042920776.1 104884 105931 + 348PF02687FtsXFtsX-like permease family2.50E-11
WP_003943539.1 105927 106668 + 246PF00005
PF02463
PF13604
PF13304
PF13555
ABC_tran
SMC_N
AAA_30
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
2.30E-32
2.80E-10
2.40E-07
6.30E-07
7.70E-06
WP_003943598.1 106779 107220 + 146PF13426
PF13188
PF00989
PF08448
PAS_9
PAS_8
PAS
PAS_4
PAS domain
PAS domain
PAS fold
PAS fold
9.00E-10
1.40E-07
6.10E-07
9.20E-07
WP_003943606.1 107853 107226 - 208PF00440TetR_NBacterial regulatory proteins, tetR family2.70E-12
WP_164490542.1 107904 108876 + 323PF04321RmlD_sub_bindRmlD substrate binding domain4.70E-05
WP_030535883.1 110115 108822 - 430PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-44
WP_030535882.1 111452 110111 - 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-54
WP_265154442.1 112875 111444 - 476PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
8.70E-27
1.40E-10
WP_125050155.1 113684 112871 - 270NO PFAM MATCH---
WP_003943543.1 113967 113778 - 62NO PFAM MATCH---
WP_125050156.1 114059 115319 + 419PF05977
PF07690
MFS_3
MFS_1
Transmembrane secretion effector
Major Facilitator Superfamily
5.80E-31
9.30E-17
WP_042920630.1 115403 116471 + 355PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
9.70E-96
2.80E-04
WP_042920629.1 116467 117262 + 264PF00005
PF13304
PF02463
PF13191
PF13175
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
5.30E-29
5.80E-12
2.50E-07
3.70E-05
3.90E-05
WP_064113842.1 117258 118239 + 326PF01497Peripla_BP_2Periplasmic binding protein2.30E-22
WP_042920627.1 118235 118919 + 227PF00881NitroreductaseNitroreductase family1.50E-17

Results for WP_023247066.1 back to top

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Couldn't process WP_023247066.1 Genbank filestream. May be corrupt.

Results for WP_000194824.1 back to top

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Couldn't process WP_000194824.1 Genbank filestream. May be corrupt.

Results for WP_001604262.1 back to top

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Couldn't process WP_001604262.1 Genbank filestream. May be corrupt.

Results for WP_023187136.1 back to top

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Couldn't process WP_023187136.1 Genbank filestream. May be corrupt.

Results for WP_038397799.1 [Salmonella enterica subsp. arizonae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_309009.1 4177905 4178428 + 174INFERRED GENE---
WP_058819420.1 4178732 4179881 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
4.60E-24
8.30E-08
5.30E-07
WP_000073214.1 4180098 4181520 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.20E-28
1.40E-13
WP_079829375.1 4183044 4182246 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.30E-31
1.90E-18
2.70E-06
NP_459946.1 4183162 4183255 + 31INFERRED GENE---
WP_024131946.1 4183616 4184567 + 316PF11047SopDSalmonella outer protein D1.30E-148
WP_140197838.1 4186927 4184644 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.30E-208
4.90E-44
WP_012210315.1 4187845 4186987 - 285PF01226Form_Nir_transFormate/nitrite transporter5.40E-75
WP_038397799.1 4190009 4188248 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.50E-81
7.90E-65
WP_000642865.1 4190145 4190838 + 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_079829374.1 4191027 4192116 + 362PF00266Aminotran_5Aminotransferase class-V3.10E-68
WP_038396286.1 4192186 4193470 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-150
NP_459954.1 4193518 4193792 + 91INFERRED GENE---
WP_140197839.1 4194024 4194708 + 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
9.60E-85
3.80E-07
3.30E-04
7.50E-04
WP_140197840.1 4194821 4196495 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.30E-100
1.60E-11
4.10E-07
WP_000167329.1 4196650 4196935 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.60E-29
6.20E-08
9.10E-05
WP_140197841.1 4197164 4199429 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
7.80E-54
1.40E-14
8.60E-07

Results for WP_033883303.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000165876.1 62624 61997 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_016244462.1 62938 64087 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
8.40E-27
2.30E-10
1.10E-06
WP_000918506.1 64296 65727 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
6.50E-28
1.10E-12
WP_016244463.1 66636 65727 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.30E-32
1.20E-19
WP_001190363.1 66735 67326 + 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
2.70E-39
3.70E-12
WP_000111043.1 68148 67407 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292822.1 70622 68339 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.70E-209
1.60E-43
WP_000642546.1 71534 70676 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_033883303.1 73700 71939 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.10E-83
6.30E-67
WP_226489414.1 73829 74522 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 74720 75809 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000445231.1 75879 77163 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_226489415.1 77331 78096 + 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000125016.1 78268 78952 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 79062 80736 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 80895 81180 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_016244465.1 81386 83651 + 754PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
3.80E-51
3.70E-19

Results for WP_001524421.1 back to top

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Couldn't process WP_001524421.1 Genbank filestream. May be corrupt.

Results for WP_001747674.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_024223917.1 back to top

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Couldn't process WP_024223917.1 Genbank filestream. May be corrupt.

Results for WP_001612733.1 back to top

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Couldn't process WP_001612733.1 Genbank filestream. May be corrupt.

Results for WP_003100043.1 [Streptococcus iniae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_031239160.1 2601 3033 + 143PF00903
PF12681
Glyoxalase
Glyoxalase_2
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
1.60E-09
2.70E-06
WP_003100054.1 3029 3578 + 182PF08002DUF1697Protein of unknown function (DUF1697)7.10E-28
WP_003100052.1 4048 3601 - 148PF07997DUF1694Protein of unknown function (DUF1694)1.30E-28
WP_003100050.1 4269 5577 + 435PF00113
PF03952
PF07476
PF13378
Enolase_C
Enolase_N
MAAL_C
MR_MLE_C
Enolase, C-terminal TIM barrel domain
Enolase, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
Enolase C-terminal domain-like
3.50E-130
9.70E-61
1.70E-07
3.00E-06
WP_000605383.1 5800 5905 + 35INFERRED GENE---
WP_003100048.1 6224 6389 + 54NO PFAM MATCH---
WP_003100046.1 6617 7568 + 316PF00881NitroreductaseNitroreductase family3.40E-11
WP_003100045.1 7564 8629 + 354NO PFAM MATCH---
WP_003100043.1 8641 10000 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-44
WP_003100041.1 9974 10637 + 220PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.50E-07
WP_003100039.1 10641 11331 + 229PF19393DUF5968Family of unknown function (DUF5968)1.90E-22
WP_003100036.1 11353 12277 + 307PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
9.30E-33
1.60E-13
WP_003100035.1 12285 13413 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.50E-25
1.60E-16
2.80E-11
WP_003100032.1 13409 14528 + 372PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.10E-38
2.10E-18
9.00E-04
WP_003100030.1 14843 17665 + 940INFERRED GENE---

Results for WP_053255850.1 [Pseudomonas fluorescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_155512285.1 456870 457014 + 47NO PFAM MATCH---
WP_053255858.1 457145 457766 + 206PF01810LysELysE type translocator1.50E-23
WP_053255857.1 457796 458189 + 130PF07366
PF12680
SnoaL
SnoaL_2
SnoaL-like polyketide cyclase
SnoaL-like domain
1.20E-35
5.10E-14
WP_053255856.1 458208 458691 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase4.30E-46
WP_053255855.1 458795 459773 + 325PF07859
PF20434
PF10340
PF00326
PF12146
Abhydrolase_3
BD-FAE
Say1_Mug180
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
BD-FAE
Steryl acetyl hydrolase
Prolyl oligopeptidase family
Serine aminopeptidase, S33
7.80E-45
1.30E-07
1.20E-06
1.60E-06
2.50E-04
WP_053255853.1 460058 460910 + 283PF00701DHDPSDihydrodipicolinate synthetase family7.30E-54
WP_053255852.1 461053 462430 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
2.40E-64
1.20E-14
WP_053255851.1 462426 463593 + 388PF01053
PF00266
Cys_Met_Meta_PP
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class-V
2.20E-149
4.90E-04
WP_053255850.1 467045 464846 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.00E-73
5.00E-71
3.70E-08
WP_053255849.1 467180 467801 + 206PF01810LysELysE type translocator1.10E-29
WP_053255848.1 468471 467814 - 218PF13578
PF01596
Methyltransf_24
Methyltransf_3
Methyltransferase domain
O-methyltransferase
1.50E-13
3.10E-13
WP_053255847.1 468582 469215 + 210PF17923
PF00440
PF17918
TetR_C_18
TetR_N
TetR_C_15
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
5.10E-36
7.50E-15
4.50E-06
WP_167422766.1 469292 469448 + 51NO PFAM MATCH---
WP_053255846.1 469499 470813 + 437PF01266
PF12831
PF00890
PF07992
PF01946
DAO
FAD_oxidored
FAD_binding_2
Pyr_redox_2
Thi4
FAD dependent oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
Thi4 family
2.30E-50
2.30E-07
2.60E-05
3.00E-05
4.80E-05
WP_053255845.1 470882 471443 + 186PF00857IsochorismataseIsochorismatase family9.10E-36
WP_053255844.1 471456 472524 + 355PF01266
PF07992
PF00890
PF13450
PF03486
DAO
Pyr_redox_2
FAD_binding_2
NAD_binding_8
HI0933_like
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
NAD(P)-binding Rossmann-like domain
HI0933-like protein
3.60E-42
4.20E-09
6.10E-08
3.00E-06
2.50E-05
WP_053255843.1 472985 472535 - 149PF00293NUDIXNUDIX domain1.30E-15

Results for WP_064053444.1 [Pseudomonas marginalis pv. marginalis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012724574.1 1389 825 - 187PF00440TetR_NBacterial regulatory proteins, tetR family1.10E-10
WP_064053438.1 1530 2223 + 230PF13417
PF13409
PF02798
PF13410
PF00043
GST_N_3
GST_N_2
GST_N
GST_C_2
GST_C
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
9.10E-15
2.90E-14
5.70E-11
2.30E-06
7.00E-06
WP_064053439.1 2463 2895 + 143PF01230HITHIT domain4.40E-04
WP_156521564.1 2972 3113 + 46NO PFAM MATCH---
WP_064053440.1 3683 3122 - 186PF00857IsochorismataseIsochorismatase family3.40E-37
WP_064053641.1 4489 4006 - 160PF13673
PF13508
PF00583
PF14542
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Acetyltransf_CG
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
GCN5-related N-acetyl-transferase
1.20E-09
1.30E-09
5.30E-09
1.00E-05
WP_064053442.1 4612 6016 + 467NO PFAM MATCH---
WP_064053443.1 7659 6093 - 521PF00015
PF08447
PF00989
PF13426
PF13188
MCPsignal
PAS_3
PAS
PAS_9
PAS_8
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS fold
PAS domain
PAS domain
5.50E-49
8.50E-13
7.70E-09
9.00E-09
7.20E-04
WP_064053444.1 7822 10021 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.70E-75
1.00E-70
4.30E-08
WP_012724563.1 11495 10328 - 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme3.10E-148
WP_122313554.1 12855 11491 - 453PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
7.30E-64
1.30E-14

Results for WP_063611834.1 [Pseudomonas fluorescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_122304902.1 444 0 - 148PF00005
PF13191
PF13555
ABC_tran
AAA_16
AAA_29
ABC transporter
AAA ATPase domain
P-loop containing region of AAA domain
6.50E-21
2.10E-04
4.80E-04
WP_058426391.1 719 1397 + 225PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.60E-06
WP_058426369.1 1571 3227 + 551PF02366
PF13231
PMT
PMT_2
Dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-protein mannosyltransferase
7.30E-26
2.60E-18
WP_058426368.1 3226 4747 + 506PF13231PMT_2Dolichyl-phosphate-mannose-protein mannosyltransferase9.30E-18
WP_058426367.1 5467 4756 - 236PF13304
PF00005
AAA_21
ABC_tran
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
1.60E-16
6.30E-14
WP_058426366.1 6210 5466 - 247NO PFAM MATCH---
WP_063611834.1 7412 6218 - 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-13
WP_058426364.1 8205 7398 - 268NO PFAM MATCH---
WP_058426363.1 9059 8201 - 285NO PFAM MATCH---

Results for WP_058420437.1 [Pseudomonas salomonii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058420431.1 326 947 + 206PF01810LysELysE type translocator5.80E-26
WP_058420432.1 1001 1403 + 133PF07366
PF12680
SnoaL
SnoaL_2
SnoaL-like polyketide cyclase
SnoaL-like domain
4.20E-37
1.50E-15
WP_058420433.1 1453 1933 + 159PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase7.60E-47
WP_058420434.1 2366 3218 + 283PF00701DHDPSDihydrodipicolinate synthetase family2.30E-54
WP_058420435.1 3357 4734 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
1.00E-64
8.20E-16
WP_058420436.1 4730 5897 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme1.40E-148
WP_058420437.1 8231 6032 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
4.30E-74
6.50E-72
4.80E-08
WP_056860340.1 8991 8334 - 218PF13578
PF01596
Methyltransf_24
Methyltransf_3
Methyltransferase domain
O-methyltransferase
6.40E-14
8.50E-14
WP_058420438.1 9111 9744 + 210PF17923
PF00440
PF17918
TetR_C_18
TetR_N
TetR_C_15
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
1.40E-31
1.70E-14
2.40E-04
WP_058420439.1 10010 10571 + 186PF00857IsochorismataseIsochorismatase family2.80E-37
WP_056860173.1 11017 10567 - 149PF00293NUDIXNUDIX domain5.30E-15
WP_058420440.1 11441 11009 - 143PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily2.30E-04
WP_058420441.1 11884 11437 - 148PF01230HITHIT domain5.00E-04
WP_058420442.1 11969 12614 + 214PF01177Asp_Glu_raceAsp/Glu/Hydantoin racemase1.70E-08
WP_058420443.1 12754 14695 + 646PF00015
PF02743
PF00672
PF17201
MCPsignal
dCache_1
HAMP
Cache_3-Cache_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
Cache 3/Cache 2 fusion domain
2.90E-39
2.20E-24
6.00E-09
8.70E-04

Results for WP_025259149.1 [Pseudomonas cichorii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025259141.1 1620070 1621081 + 336PF00107
PF13602
PF08240
PF01262
ADH_zinc_N
ADH_zinc_N_2
ADH_N
AlaDh_PNT_C
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
Alanine dehydrogenase/PNT, C-terminal domain
9.00E-29
7.30E-15
8.10E-10
3.70E-04
WP_025259142.1 1621751 1621163 - 195NO PFAM MATCH---
WP_025259143.1 1622063 1621775 - 95NO PFAM MATCH---
WP_025259144.1 1622476 1623847 + 456PF02447
PF03600
GntP_permease
CitMHS
GntP family permease
Citrate transporter
2.60E-137
7.30E-18
WP_025259145.1 1624342 1623826 - 171PF12680SnoaL_2SnoaL-like domain1.40E-11
WP_025259146.1 1625423 1624343 - 359PF00248Aldo_ket_redAldo/keto reductase family4.20E-74
WP_025259147.1 1625568 1626489 + 306PF06719
PF12833
PF00165
AraC_N
HTH_18
HTH_AraC
AraC-type transcriptional regulator N-terminus
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
9.70E-49
6.80E-20
3.40E-14
WP_025259148.1 1626567 1627617 + 349PF14441OTT_1508_deamOTT_1508-like deaminase3.40E-06
WP_025259149.1 1627769 1629962 + 730PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.10E-74
2.10E-72
3.00E-08
WP_236249351.1 1630321 1630042 - 92PF01638HxlRHxlR-like helix-turn-helix7.90E-23
WP_025259151.1 1630510 1630921 + 136PF13564DoxX_2DoxX-like family2.80E-06
WP_038399770.1 1631221 1630939 - 93NO PFAM MATCH---
WP_025259153.1 1631341 1632040 + 232PF09339
PF01614
PF12802
HTH_IclR
IclR
MarR_2
IclR helix-turn-helix domain
Bacterial transcriptional regulator
MarR family
3.40E-11
1.40E-06
3.20E-04
WP_025259154.1 1633623 1632291 - 443PF07690MFS_1Major Facilitator Superfamily4.00E-41
WP_025259155.1 1634679 1633701 - 325PF02826
PF00389
PF03446
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NAD binding domain of 6-phosphogluconate dehydrogenase
1.20E-59
3.30E-22
8.80E-04
WP_025259156.1 1634909 1635587 + 225PF03737RraA-likeAldolase/RraA1.10E-44
WP_025259157.1 1636711 1635739 - 323PF00795CN_hydrolaseCarbon-nitrogen hydrolase2.70E-35

Results for WP_005829460.1 [Brevibacillus agri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_129552174.1 107 305 + 65NO PFAM MATCH---
WP_122952626.1 465 1332 + 288NO PFAM MATCH---
WP_005829458.1 1324 2155 + 276PF00881NitroreductaseNitroreductase family7.60E-05
WP_005829460.1 2144 3224 + 359PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-10
WP_081592037.1 3236 4349 + 370PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-22
WP_005829464.1 4430 5189 + 252NO PFAM MATCH---
WP_005829466.1 5216 5954 + 245PF13304
PF00005
PF02463
PF13476
PF03193
AAA_21
ABC_tran
SMC_N
AAA_23
RsgA_GTPase
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
RsgA GTPase
3.60E-15
1.60E-12
1.30E-05
8.30E-05
6.40E-04
WP_005829467.1 6290 5963 - 108PF06863DUF1254Protein of unknown function (DUF1254)9.50E-13
WP_025844796.1 6646 7537 + 296PF09935DUF2167Protein of unknown function (DUF2167)2.60E-66
WP_241764843.1 7743 8343 + 199PF09335SNARE_assocSNARE associated Golgi protein1.40E-15
WP_238501632.1 8465 9020 + 184NO PFAM MATCH---
WP_007783027.1 9117 9774 + 218PF16576
PF13437
PF12700
HlyD_D23
HlyD_3
HlyD_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
HlyD family secretion protein
4.40E-18
6.00E-18
3.00E-04

Results for WP_071803308.1 [Couchioplanes caeruleus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244945249.1 3420235 3419770 - 154NO PFAM MATCH---
WP_071803315.1 3420628 3420283 - 114NO PFAM MATCH---
WP_071803314.1 3421336 3420667 - 222PF08241
PF13649
PF13489
PF13847
PF08242
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.80E-25
1.40E-21
2.10E-14
5.30E-13
1.00E-12
WP_071803313.1 3421430 3422672 + 413PF01494
PF13450
PF07992
PF01266
PF00890
FAD_binding_3
NAD_binding_8
Pyr_redox_2
DAO
FAD_binding_2
FAD binding domain
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
2.00E-20
7.90E-08
1.10E-06
1.90E-06
1.20E-05
WP_123678296.1 3424243 3422740 - 500PF00881NitroreductaseNitroreductase family4.60E-08
WP_071803311.1 3425237 3424259 - 325PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.10E-58
WP_071803310.1 3427845 3425229 - 871PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus6.40E-41
WP_071803309.1 3429399 3427860 - 512PF00881NitroreductaseNitroreductase family3.00E-09
WP_071803308.1 3431377 3429409 - 655PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.50E-78
WP_170047122.1 3433424 3431378 - 681PF00899
PF02624
ThiF
YcaO
ThiF family
YcaO cyclodehydratase, ATP-ad Mg2+-binding
9.70E-09
1.20E-08
WP_170047120.1 3433741 3433567 - 57NO PFAM MATCH---
WP_084556126.1 3435146 3434237 - 302PF08840
PF01738
PF00326
PF00561
PF05448
BAAT_C
DLH
Peptidase_S9
Abhydrolase_1
AXE1
BAAT / Acyl-CoA thioester hydrolase C terminal
Dienelactone hydrolase family
Prolyl oligopeptidase family
alpha/beta hydrolase fold
Acetyl xylan esterase (AXE1)
1.60E-29
3.70E-07
2.80E-05
5.60E-05
9.10E-05
WP_071803305.1 3436342 3435157 - 394PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.30E-51
WP_170208269.1 3436568 3437807 + 412PF00201
PF04101
UDPGT
Glyco_tran_28_C
UDP-glucoronosyl and UDP-glucosyl transferase
Glycosyltransferase family 28 C-terminal domain
1.10E-19
1.00E-07
WP_071803303.1 3437803 3438577 + 257PF05050Methyltransf_21Methyltransferase FkbM domain4.10E-14
WP_071803302.1 3442521 3438630 - 1296PF04997
PF04998
PF00623
PF04983
PF05000
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA polymerase Rpb1, domain 1
RNA polymerase Rpb1, domain 5
RNA polymerase Rpb1, domain 2
RNA polymerase Rpb1, domain 3
RNA polymerase Rpb1, domain 4
8.80E-81
1.30E-66
8.40E-39
1.10E-25
4.20E-11
WP_071803300.1 3446050 3442609 - 1146PF00562
PF04561
PF04565
PF04560
PF10385
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA polymerase Rpb2, domain 6
RNA polymerase Rpb2, domain 2
RNA polymerase Rpb2, domain 3
RNA polymerase Rpb2, domain 7
RNA polymerase beta subunit external 1 domain
8.10E-159
2.50E-29
3.60E-28
2.40E-26
5.20E-26

Results for WP_050660258.1 [Gallaecimonas pentaromativorans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_050660266.1 201 852 + 216PF02254
PF02080
PF03807
PF03446
PF01370
TrkA_N
TrkA_C
F420_oxidored
NAD_binding_2
Epimerase
TrkA-N domain
TrkA-C domain
NADP oxidoreductase coenzyme F420-dependent
NAD binding domain of 6-phosphogluconate dehydrogenase
NAD dependent epimerase/dehydratase family
4.70E-29
3.00E-08
6.90E-07
1.40E-06
4.20E-05
WP_123422716.1 848 2210 + 453PF02386TrkHCation transport protein3.20E-57
WP_050660264.1 3216 2238 - 325PF13409
PF13410
PF14497
PF00043
PF13417
GST_N_2
GST_C_2
GST_C_3
GST_C
GST_N_3
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, N-terminal domain
1.20E-19
6.30E-13
7.80E-07
1.30E-06
4.60E-04
WP_050660263.1 3362 4139 + 258PF04224DUF417Protein of unknown function, DUF4171.60E-06
WP_050660262.1 4223 4793 + 189PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
2.40E-33
1.90E-10
WP_123422717.1 6472 4846 - 541PF00884
PF08019
Sulfatase
EptA_B_N
Sulfatase
Phosphoethanolamine transferase EptA/EptB
2.60E-43
1.40E-34
WP_050660260.1 6745 7198 + 150PF02639DUF188Uncharacterized BCR, YaiI/YqxD family COG16711.70E-50
WP_123422718.1 7317 8091 + 257NO PFAM MATCH---
WP_050660258.1 9846 8121 - 574PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.70E-71
1.20E-29
WP_123422719.1 11224 9898 - 441PF00158
PF14532
PF00072
PF02954
PF07728
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Sigma-54 interaction domain
Sigma-54 interaction domain
Response regulator receiver domain
Bacterial regulatory protein, Fis family
AAA domain (dynein-related subfamily)
5.00E-68
8.10E-28
2.10E-22
9.30E-09
9.10E-07
WP_148049883.1 12669 11223 - 481PF02518
PF00512
PF14827
PF00672
PF13589
HATPase_c
HisKA
dCache_3
HAMP
HATPase_c_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Double sensory domain of two-component sensor kinase
HAMP domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
6.40E-15
2.00E-12
3.30E-05
4.30E-05
5.60E-05
WP_050660255.1 12845 13208 + 120PF13767DUF4168Domain of unknown function (DUF4168)1.10E-17
WP_123422721.1 14282 13235 - 348PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family2.50E-30
WP_123422722.1 14557 17743 + 1061PF13620
PF00593
PF07715
CarboxypepD_reg
TonB_dep_Rec
Plug
Carboxypeptidase regulatory-like domain
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.40E-15
6.00E-08
5.20E-05
WP_123422723.1 19078 17854 - 407PF01663
PF00884
Phosphodiest
Sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase
Sulfatase
4.90E-75
1.40E-07
WP_123422724.1 19958 19166 - 263PF12833
PF00165
PF02311
HTH_18
HTH_AraC
AraC_binding
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-like ligand binding domain
3.90E-18
2.00E-14
1.00E-06
WP_123422725.1 20028 20307 + 92NO PFAM MATCH---

Results for WP_004188975.1 back to top

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Couldn't process WP_004188975.1 Genbank filestream. May be corrupt.

Results for WP_069573676.1 [Methanobrevibacter gottschalkii DSM 11977] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_069573370.1 73877 72464 - 470PF00171AldedhAldehyde dehydrogenase family4.90E-157
WP_069573363.1 73927 74509 + 193PF06736TMEM175Endosomal/lysosomal potassium channel TMEM1758.10E-18
WP_069573355.1 74498 75071 + 190PF06736TMEM175Endosomal/lysosomal potassium channel TMEM1753.30E-19
WP_069573350.1 76174 75226 - 315PF01758
PF13593
SBF
SBF_like
Sodium Bile acid symporter family
SBF-like CPA transporter family (DUF4137)
2.40E-38
1.10E-20
WP_069573344.1 76392 76209 - 60PF04021Class_IIIsignalClass III signal peptide5.70E-05
WP_123833456.1 77318 76391 - 308PF00482T2SSFType II secretion system (T2SS), protein F4.80E-19
WP_069573672.1 78593 77576 - 338PF00557
PF01321
PF16189
Peptidase_M24
Creatinase_N
Creatinase_N_2
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
Creatinase/Prolidase N-terminal domain
2.10E-52
3.40E-11
5.00E-04
WP_069573674.1 78670 79312 + 213PF02163Peptidase_M50Peptidase family M505.50E-04
WP_069573676.1 79313 80516 + 400PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-83
WP_069573678.1 80520 81171 + 216PF07812TfuATfuA-like protein6.00E-43
WP_069573680.1 81167 82178 + 336PF06508
PF01171
PF02540
PF01507
QueC
ATP_bind_3
NAD_synthase
PAPS_reduct
Queuosine biosynthesis protein QueC
PP-loop family
NAD synthase
Phosphoadenosine phosphosulfate reductase family
1.50E-08
2.70E-07
5.70E-07
4.50E-04
WP_069573682.1 82633 82174 - 152NO PFAM MATCH---
WP_069573684.1 83486 82640 - 281PF00571CBSCBS domain8.00E-38
WP_069573686.1 83955 83532 - 140PF00582UspUniversal stress protein family1.30E-36
WP_069573688.1 85151 83996 - 384PF01979Amidohydro_1Amidohydrolase family2.10E-29
WP_233144858.1 85343 85874 + 176PF13248zf-ribbon_3zinc-ribbon domain9.40E-05
WP_069573798.1 89068 85891 - 1058PF02786
PF02787
PF07478
PF02142
PF02222
CPSase_L_D2
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carbamoyl-phosphate synthetase large chain, oligomerisation domain
D-ala D-ala ligase C-terminus
MGS-like domain
ATP-grasp domain
1.00E-115
4.00E-21
4.20E-18
1.00E-15
1.30E-15

Results for WP_023423287.1 [Streptomyces sp. GBA 94-10 4N24] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023420767.1 6626978 6625724 - 417NO PFAM MATCH---
WP_037787547.1 6627148 6628138 + 329PF01497Peripla_BP_2Periplasmic binding protein1.20E-16
WP_023423283.1 6628134 6629169 + 344PF01032FecCDFecCD transport family2.00E-65
WP_037788141.1 6629165 6630221 + 351PF01032FecCDFecCD transport family1.60E-66
WP_023423284.1 6630342 6631179 + 278PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.40E-29
2.30E-06
2.20E-04
WP_008409986.1 6631247 6631382 + 44NO PFAM MATCH---
WP_023423285.1 6631524 6632370 + 281NO PFAM MATCH---
WP_023423286.1 6632366 6633896 + 509PF02129
PF08530
PF00326
Peptidase_S15
PepX_C
Peptidase_S9
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Prolyl oligopeptidase family
1.20E-40
4.50E-18
8.90E-05
WP_023423287.1 6633892 6635260 + 455PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-36
WP_265668182.1 6635273 6636581 + 435PF00881NitroreductaseNitroreductase family3.90E-05
WP_023423290.1 6636639 6638385 + 581PF00005
PF00664
PF02463
PF13191
PF13401
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
4.60E-32
5.10E-10
3.90E-06
7.60E-05
1.30E-04
WP_023423291.1 6638381 6640166 + 594PF00005
PF00664
PF02463
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.10E-26
1.40E-09
7.10E-05
9.90E-05
WP_023423292.1 6640775 6640259 - 171PF01625PMSRPeptide methionine sulfoxide reductase3.00E-56
WP_023420779.1 6640997 6641471 + 157PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.70E-12
3.00E-09
8.50E-06
WP_234025411.1 6641599 6642181 + 193PF12464
PF00132
PF14602
Mac
Hexapep
Hexapep_2
Maltose acetyltransferase
Bacterial transferase hexapeptide (six repeats)
Hexapeptide repeat of succinyl-transferase
3.60E-14
6.30E-13
8.20E-09
WP_023423294.1 6643370 6642260 - 369PF01594AI-2E_transportAI-2E family transporter3.60E-51
WP_051367820.1 6644081 6644588 + 168NO PFAM MATCH---

Results for WP_056789823.1 [Streptomyces sp. ADI97-07] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_241191725.1 1838018 1836038 - 659PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-79
WP_056789625.1 1838770 1838014 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
5.50E-27
8.40E-19
WP_124280898.1 1839762 1838766 - 331PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
6.80E-28
2.90E-15
4.10E-07
2.90E-04
WP_241191801.1 1840871 1839815 - 351PF02163Peptidase_M50Peptidase family M501.20E-04
WP_124280899.1 1842196 1841011 - 394PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.70E-89
WP_124280900.1 1844985 1842183 - 933PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus8.00E-43
WP_124280901.1 1846665 1845000 - 554PF00881NitroreductaseNitroreductase family8.20E-20
WP_124280902.1 1848671 1846706 - 654PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-80
WP_056789823.1 1850916 1848660 - 751PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-16
WP_241191726.1 1852071 1851022 - 348PF00931
PF13191
PF13481
NB-ARC
AAA_16
AAA_25
NB-ARC domain
AAA ATPase domain
AAA domain
1.30E-11
3.50E-06
5.30E-04
WP_164494156.1 1853196 1852350 - 282PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
1.30E-34
1.20E-08
WP_124280903.1 1853462 1853258 - 67NO PFAM MATCH---
WP_056789596.1 1853954 1854962 + 335PF13384
PF00196
PF02796
PF13551
PF01381
HTH_23
GerE
HTH_7
HTH_29
HTH_3
Homeodomain-like domain
Bacterial regulatory proteins, luxR family
Helix-turn-helix domain of resolvase
Winged helix-turn helix
Helix-turn-helix
7.20E-08
1.10E-07
2.50E-04
3.80E-04
4.20E-04
WP_056789593.1 1855218 1855005 - 70NO PFAM MATCH---
WP_164494112.1 1857026 1855376 - 549PF00905
PF05223
Transpeptidase
MecA_N
Penicillin binding protein transpeptidase domain
NTF2-like N-terminal transpeptidase domain
2.20E-49
2.60E-18
WP_056789590.1 1858262 1857287 - 324PF02668TauDTaurine catabolism dioxygenase TauD, TfdA family3.20E-17
WP_124280905.1 1859209 1858258 - 316PF00491ArginaseArginase family2.00E-83

Results for WP_023417533.1 [Streptomyces sp. ADI96-15] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026048345.1 218885 219062 + 58NO PFAM MATCH---
WP_124273740.1 221050 219145 - 634PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-76
WP_023417527.1 222429 221673 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.60E-29
1.90E-21
3.10E-05
WP_023421891.1 223421 222479 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_023417529.1 224590 223471 - 372PF02163Peptidase_M50Peptidase family M506.60E-04
WP_023421893.1 225654 224586 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.80E-96
WP_023417531.1 228416 225650 - 921PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-46
WP_023417532.1 230020 228412 - 535PF00881NitroreductaseNitroreductase family2.70E-18
WP_023417533.1 232026 230073 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-81
WP_124273558.1 234238 232015 - 740NO PFAM MATCH---
WP_124273559.1 236131 234244 - 628PF03704
PF13191
PF00486
PF00931
PF05729
BTAD
AAA_16
Trans_reg_C
NB-ARC
NACHT
Bacterial transcriptional activator domain
AAA ATPase domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
NACHT domain
1.10E-38
1.40E-09
3.10E-08
1.10E-06
5.70E-04
WP_023421898.1 236373 236139 - 77NO PFAM MATCH---
WP_023417537.1 236819 238412 + 530PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
4.00E-50
5.20E-12
3.70E-11
WP_124273741.1 238983 238431 - 183PF13977
PF00440
PF17754
PF16859
TetR_C_6
TetR_N
TetR_C_14
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
MftR C-terminal domain
Tetracyclin repressor-like, C-terminal domain
4.20E-21
9.90E-10
4.90E-04
7.40E-04
WP_023421900.1 239101 239665 + 187PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
3.30E-18
1.50E-06
WP_023417540.1 240683 239915 - 255PF05630NPP1Necrosis inducing protein (NPP1)4.60E-62
WP_023417541.1 240965 241220 + 84NO PFAM MATCH---

Results for WP_036846884.1 [Bacteroides heparinolyticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_036846901.1 73912 73126 - 261PF01656
PF13614
PF09140
PF10609
CbiA
AAA_31
MipZ
ParA
CobQ/CobB/MinD/ParA nucleotide binding domain
AAA domain
ATPase MipZ
NUBPL iron-transfer P-loop NTPase
7.80E-07
2.00E-05
3.30E-05
4.40E-04
WP_018964952.1 74463 74259 - 67NO PFAM MATCH---
WP_036846899.1 74461 74842 + 126PF19514MobC_2MobC-like protein8.50E-44
WP_125238627.1 74838 76122 + 427PF03432RelaxaseRelaxase/Mobilisation nuclease domain4.80E-17
WP_125238628.1 76173 78174 + 666PF14293
PF12696
PF10412
PF02534
YWFCY
TraG-D_C
TrwB_AAD_bind
T4SS-DNA_transf
YWFCY protein
TraM recognition site of TraD and TraG
Type IV secretion-system coupling protein DNA-binding domain
Type IV secretory system Conjugative DNA transfer
4.00E-51
5.70E-15
5.00E-13
1.20E-12
WP_125238629.1 78669 78183 - 161NO PFAM MATCH---
WP_036846888.1 80887 78670 - 738PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
5.80E-33
1.00E-28
2.20E-25
1.40E-07
3.50E-06
WP_036846886.1 82987 80890 - 698NO PFAM MATCH---
WP_036846884.1 85370 83525 - 614PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.10E-47
WP_036846876.1 86243 85391 - 283PF00535Glycos_transf_2Glycosyl transferase family 24.30E-14
WP_160224191.1 88531 86239 - 763PF14905
PF13620
OMP_b-brl_3
CarboxypepD_reg
Outer membrane protein beta-barrel family
Carboxypeptidase regulatory-like domain
1.50E-39
7.60E-07
WP_036846872.1 88848 88662 - 61NO PFAM MATCH---
WP_036846869.1 90218 89066 - 383PF08541
PF08545
ACP_syn_III_C
ACP_syn_III
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
1.80E-13
3.40E-04
WP_036846864.1 90839 90230 - 202PF00440TetR_NBacterial regulatory proteins, tetR family7.80E-15
WP_185741327.1 91228 92548 + 439PF04055
PF13186
PF13394
PF13353
Radical_SAM
SPASM
Fer4_14
Fer4_12
Radical SAM superfamily
Iron-sulfur cluster-binding domain
4Fe-4S single cluster domain
4Fe-4S single cluster domain
8.20E-17
6.60E-12
5.00E-07
1.20E-05
WP_185741328.1 92576 92741 + 54NO PFAM MATCH---
WP_125238630.1 93117 94512 + 464PF13101
PF13351
PF13342
DUF3945
DUF4099
Toprim_Crpt
Protein of unknown function (DUF3945)
Protein of unknown function (DUF4099)
C-terminal repeat of topoisomerase
1.50E-31
1.40E-27
1.10E-25

Results for WP_014918504.1 [Lactobacillus helveticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014918498.1 670587 672051 + 487PF01087
PF02744
GalP_UDP_transf
GalP_UDP_tr_C
Galactose-1-phosphate uridyl transferase, N-terminal domain
Galactose-1-phosphate uridyl transferase, C-terminal domain
1.90E-29
7.50E-29
WP_014918499.1 672169 673165 + 331PF01263Aldose_epimAldose 1-epimerase7.90E-56
WP_076611100.1 673310 674169 + 286INFERRED GENE---
WP_013682684.1 674496 674817 + 106NO PFAM MATCH---
WP_241958329.1 674841 676446 + 534PF00005
PF00664
PF13304
ABC_tran
ABC_membrane
AAA_21
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
4.80E-20
3.10E-16
7.90E-06
WP_014918500.1 676448 677309 + 286NO PFAM MATCH---
WP_227028465.1 677311 677923 + 203NO PFAM MATCH---
WP_107775393.1 677925 678921 + 331NO PFAM MATCH---
WP_014918504.1 678937 679942 + 334PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.40E-08
WP_014918505.1 679961 680801 + 279NO PFAM MATCH---
WP_014918506.1 680790 681582 + 263PF00881NitroreductaseNitroreductase family2.70E-11
WP_076611100.1 681748 682607 + 286INFERRED GENE---
WP_041808684.1 683409 682749 - 219NO PFAM MATCH---
WP_138427177.1 683708 683462 - 81NO PFAM MATCH---
WP_076612331.1 683807 684257 + 150INFERRED GENE---
WP_020806792.1 684268 684802 + 178INFERRED GENE---
WP_013086582.1 684809 686084 + 425INFERRED GENE---

Results for WP_014918795.1 [Lactobacillus helveticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005721953.1 1037347 1038480 + 377INFERRED GENE---
WP_014918788.1 1038604 1040290 + 561NO PFAM MATCH---
WP_014563300.1 1040465 1041636 + 390INFERRED GENE---
WP_014563640.1 1041696 1041804 + 36INFERRED GENE---
WP_014918791.1 1042793 1042028 - 254PF12698ABC2_membrane_3ABC-2 family transporter protein3.10E-09
WP_107775336.1 1043715 1042794 - 306PF00005
PF13304
PF13175
PF02463
ABC_tran
AAA_21
AAA_15
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
RecF/RecN/SMC N terminal domain
2.00E-28
1.60E-11
5.10E-05
3.20E-04
WP_041808712.1 1044879 1044240 - 212PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-06
WP_012211245.1 1046159 1044980 - 392PF00872
PF10551
PF01610
Transposase_mut
MULE
DDE_Tnp_ISL3
Transposase, Mutator family
MULE transposase domain
Transposase
5.90E-108
6.50E-10
1.40E-04
WP_014918795.1 1046935 1046287 - 215PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.80E-18
WP_014918796.1 1047821 1046924 - 298NO PFAM MATCH---
WP_014918797.1 1048374 1047825 - 182PF00881NitroreductaseNitroreductase family8.60E-10
WP_014918798.1 1048664 1048394 - 89NO PFAM MATCH---
WP_014918799.1 1049602 1049494 - 35NO PFAM MATCH---
WP_014918800.1 1050093 1052571 + 825PF02872
PF03217
PF00149
5_nucleotid_C
SlpA
Metallophos
5'-nucleotidase, C-terminal domain
Surface layer protein A domain
Calcineurin-like phosphoesterase
1.70E-27
1.30E-26
1.90E-08
WP_003664144.1 1052814 1053984 + 390INFERRED GENE---
WP_014918803.1 1056060 1054182 - 625PF13208TerB_NTerB N-terminal domain5.80E-10
WP_014918804.1 1058606 1056119 - 828PF08665
PF01663
PF01676
PglZ
Phosphodiest
Metalloenzyme
PglZ domain
Type I phosphodiesterase / nucleotide pyrophosphatase
Metalloenzyme superfamily
4.10E-43
6.90E-05
7.70E-04

Results for WP_025999161.1 back to top

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Couldn't process WP_025999161.1 Genbank filestream. May be corrupt.

Results for WP_054013401.1 [Pseudoalteromonas sp. R3] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_054013408.1 1315225 1315447 + 73PF13202
PF00036
PF13405
PF13499
PF13833
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF hand
EF hand
EF-hand domain
EF-hand domain pair
EF-hand domain pair
6.60E-12
2.70E-10
2.60E-08
1.40E-07
2.70E-04
WP_054013407.1 1315473 1315689 + 71PF13202
PF13405
PF00036
PF13499
EF-hand_5
EF-hand_6
EF-hand_1
EF-hand_7
EF hand
EF-hand domain
EF hand
EF-hand domain pair
2.10E-08
4.20E-08
6.30E-08
4.50E-06
WP_054013406.1 1315712 1315919 + 68PF13202
PF00036
PF13405
PF13833
PF13499
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF hand
EF hand
EF-hand domain
EF-hand domain pair
EF-hand domain pair
4.20E-13
5.30E-13
4.50E-11
3.20E-10
7.90E-09
WP_054013405.1 1316014 1316218 + 67PF13202
PF00036
PF13405
PF13499
PF13833
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF hand
EF hand
EF-hand domain
EF-hand domain pair
EF-hand domain pair
1.70E-13
6.00E-11
2.10E-10
1.40E-07
2.40E-05
WP_054013404.1 1316884 1316326 - 185PF13302
PF00583
PF13420
Acetyltransf_3
Acetyltransf_1
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
6.20E-30
1.90E-09
2.60E-04
WP_235577036.1 1318074 1316907 - 388PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
4.40E-36
1.20E-04
4.30E-04
WP_054013403.1 1318180 1319056 + 291PF03466
PF00126
PF15513
LysR_substrate
HTH_1
DUF4651
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
Domain of unknown function (DUF4651)
2.20E-29
2.80E-18
4.30E-04
WP_054013402.1 1320087 1319493 - 197PF13505OMP_b-brlOuter membrane protein beta-barrel domain2.60E-05
WP_054013401.1 1320281 1322465 + 727PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.50E-74
1.50E-71
3.80E-09
WP_235577035.1 1324241 1322723 - 505PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-75
WP_241566305.1 1325796 1324728 - 355PF00733Asn_synthaseAsparagine synthase1.40E-51
WP_128064492.1 1326541 1326208 - 110PF13522
PF13537
GATase_6
GATase_7
Glutamine amidotransferase domain
Glutamine amidotransferase domain
7.10E-15
8.90E-11
WP_054013398.1 1327700 1326617 - 360NO PFAM MATCH---
WP_241566283.1 1328186 1327712 - 157PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-14

Results for WP_023356641.1 back to top

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Couldn't process WP_023356641.1 Genbank filestream. May be corrupt.

Results for WP_001747674.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001530487.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_043471963.1 [Streptomyces xinghaiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063838667.1 271162 273547 + 794PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-15
WP_241843817.1 273536 275780 + 747PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-81
WP_105165614.1 275941 277642 + 566PF00881NitroreductaseNitroreductase family3.00E-20
WP_043471949.1 277649 280484 + 944PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.00E-49
WP_043471952.1 280480 281593 + 370PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.00E-97
WP_043471955.1 281589 282783 + 397PF02163Peptidase_M50Peptidase family M503.40E-06
WP_043471958.1 282880 283813 + 310PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.10E-28
3.10E-15
5.70E-05
7.30E-05
WP_043471960.1 283922 284678 + 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.10E-28
4.30E-18
2.80E-05
WP_043471963.1 284674 286675 + 666PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-77
WP_019710917.1 286964 286787 - 58NO PFAM MATCH---
WP_043471988.1 287696 288914 + 405PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
1.20E-21
3.70E-14
WP_063831821.1 288910 289204 + 97NO PFAM MATCH---
WP_043471968.1 290276 289304 - 323NO PFAM MATCH---
WP_043471970.1 290856 294465 + 1202PF00474
PF07228
PF08448
PF13581
PF13185
SSF
SpoIIE
PAS_4
HATPase_c_2
GAF_2
Sodium:solute symporter family
Stage II sporulation protein E (SpoIIE)
PAS fold
Histidine kinase-like ATPase domain
GAF domain
4.50E-83
2.20E-48
2.00E-15
1.70E-08
1.80E-06
WP_043471973.1 294927 294489 - 145NO PFAM MATCH---
WP_043471976.1 295213 296233 + 339PF00291PALPPyridoxal-phosphate dependent enzyme3.90E-62
WP_105165615.1 296344 297172 + 275PF02634FdhD-NarQFdhD/NarQ family2.90E-78

Results for WP_063838667.1 [Streptomyces xinghaiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043472828.1 261754 260746 - 335PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.40E-48
WP_050364571.1 262938 261765 - 390PF01408
PF02894
PF03447
GFO_IDH_MocA
GFO_IDH_MocA_C
NAD_binding_3
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
Homoserine dehydrogenase, NAD binding domain
7.30E-22
2.00E-17
1.90E-04
WP_019710906.1 264130 263086 - 347PF13407
PF10518
Peripla_BP_4
TAT_signal
Periplasmic binding protein domain
TAT (twin-arginine translocation) pathway signal sequence
6.30E-45
3.40E-04
WP_050364569.1 265431 264321 - 369PF02653BPD_transp_2Branched-chain amino acid transport system / permease component1.30E-31
WP_043472844.1 266930 265427 - 500PF00005
PF13304
PF03193
PF13555
PF13604
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
P-loop containing region of AAA domain
AAA domain
6.50E-47
2.60E-11
5.90E-05
1.30E-04
2.40E-04
WP_043472826.1 268498 267313 - 394PF00480
PF13412
PF01047
PF12840
ROK
HTH_24
MarR
HTH_20
ROK family
Winged helix-turn-helix DNA-binding
MarR family
Helix-turn-helix domain
8.60E-60
6.10E-05
2.50E-04
6.10E-04
WP_043472825.1 268976 269231 + 84NO PFAM MATCH---
WP_043472824.1 269239 271159 + 639PF03704
PF00931
PF00486
PF13191
BTAD
NB-ARC
Trans_reg_C
AAA_16
Bacterial transcriptional activator domain
NB-ARC domain
Transcriptional regulatory protein, C terminal
AAA ATPase domain
4.30E-41
1.60E-11
3.80E-09
9.60E-07
WP_063838667.1 271162 273547 + 794PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-15
WP_241843817.1 273536 275780 + 747PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-81
WP_105165614.1 275941 277642 + 566PF00881NitroreductaseNitroreductase family3.00E-20
WP_043471949.1 277649 280484 + 944PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.00E-49
WP_043471952.1 280480 281593 + 370PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.00E-97
WP_043471955.1 281589 282783 + 397PF02163Peptidase_M50Peptidase family M503.40E-06
WP_043471958.1 282880 283813 + 310PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.10E-28
3.10E-15
5.70E-05
7.30E-05
WP_043471960.1 283922 284678 + 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.10E-28
4.30E-18
2.80E-05
WP_043471963.1 284674 286675 + 666PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-77

Results for WP_043461231.1 [Streptomyces xinghaiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_141760202.1 44071 43558 - 170NO PFAM MATCH---
WP_241843566.1 51055 44071 - 2327PF07591
PF05593
PF05203
PF03534
PF08517
PT-HINT
RHS_repeat
Hom_end_hint
SpvB
AXH
Pretoxin HINT domain
RHS Repeat
Hom_end-associated Hint
Salmonella virulence plasmid 65kDa B protein
Ataxin-1 and HBP1 module (AXH)
8.00E-18
1.80E-17
6.50E-07
2.40E-04
5.70E-04
WP_141760203.1 54820 51178 - 1213PF13385
PF00801
Laminin_G_3
PKD
Concanavalin A-like lectin/glucanases superfamily
PKD domain
1.50E-38
3.50E-04
WP_050364065.1 56445 54894 - 516PF01839
PF13517
PF14312
FG-GAP
FG-GAP_3
FG-GAP_2
FG-GAP repeat
FG-GAP-like repeat
FG-GAP repeat
8.60E-13
2.70E-08
7.00E-06
WP_019765751.1 56699 56831 + 44INFERRED GENE---
WP_043461229.1 58738 56953 - 594PF00005
PF00664
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
2.30E-25
5.70E-12
2.00E-06
1.70E-05
WP_043461230.1 60474 58734 - 579PF00005
PF00664
PF02463
PF13191
PF13401
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
1.30E-30
1.60E-14
2.70E-07
9.40E-07
1.20E-05
WP_241843567.1 61622 60470 - 383PF00881NitroreductaseNitroreductase family5.50E-06
WP_043461231.1 63013 61633 - 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-38
WP_043461233.1 64491 63009 - 493PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
2.40E-36
9.70E-17
WP_043461235.1 65342 64487 - 284NO PFAM MATCH---
WP_241843568.1 65547 65433 - 37NO PFAM MATCH---
WP_043461236.1 66425 65603 - 273PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
8.40E-31
1.00E-07
2.40E-04
4.30E-04
WP_241843569.1 67387 66454 - 310PF01032FecCDFecCD transport family1.20E-67
WP_241843570.1 68601 67458 - 380PF01032FecCDFecCD transport family2.90E-67
WP_043461238.1 69683 68705 - 325PF01497Peripla_BP_2Periplasmic binding protein4.00E-16
WP_043461241.1 69769 70969 + 399NO PFAM MATCH---

Results for WP_020996515.1 back to top

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Couldn't process WP_020996515.1 Genbank filestream. May be corrupt.

Results for WP_017560877.1 [Bacillus sp. UTDS19-33BHI26] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017560880.1 360347 359513 - 277PF11667DUF3267Putative zincin peptidase8.20E-04
WP_017560879.1 360696 361470 + 257PF12773
PF13240
PF13248
DZR
zinc_ribbon_2
zf-ribbon_3
Double zinc ribbon
zinc-ribbon domain
zinc-ribbon domain
6.40E-06
7.80E-06
4.90E-04
WP_017672808.1 361546 361773 + 75INFERRED GENE---
WP_000332390.1 362248 361816 - 143NO PFAM MATCH---
WP_001110220.1 362445 363780 + 445INFERRED GENE---
WP_017560878.1 363882 364374 + 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.30E-10
6.30E-07
5.30E-05
WP_000996787.1 364518 364929 + 136PF13048DUF3908Protein of unknown function (DUF3908)4.10E-54
WP_001984439.1 366501 364959 - 513PF00881NitroreductaseNitroreductase family7.70E-13
WP_017560877.1 368467 366517 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-82
WP_017560876.1 370383 368463 - 639NO PFAM MATCH---
WP_000569912.1 371764 370507 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
4.20E-13
1.70E-04
WP_017560875.1 374767 371899 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
2.10E-54
5.10E-37
WP_000428510.1 375592 375802 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_001109889.1 375804 376182 + 125NO PFAM MATCH---
WP_001178301.1 376210 376393 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_017560874.1 376527 376884 + 118NO PFAM MATCH---
WP_017560873.1 376902 377172 + 89NO PFAM MATCH---

Results for WP_005285924.1 [Acinetobacter courvalinii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_171067894.1 1127863 1128652 + 262NO PFAM MATCH---
WP_005285939.1 1128648 1130235 + 528PF03321GH3GH3 auxin-responsive promoter1.20E-80
WP_005285937.1 1130231 1131569 + 445PF02321OEPOuter membrane efflux protein2.10E-43
WP_005285934.1 1131565 1132729 + 387NO PFAM MATCH---
WP_005230580.1 1132790 1133261 + 157INFERRED GENE---
WP_005285929.1 1133598 1133238 - 119PF12840
PF01022
PF13463
PF13412
PF01047
HTH_20
HTH_5
HTH_27
HTH_24
MarR
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
Winged helix DNA-binding domain
Winged helix-turn-helix DNA-binding
MarR family
2.50E-14
1.60E-07
1.00E-04
2.00E-04
5.10E-04
WP_032883161.1 1134583 1133683 - 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
3.30E-50
1.50E-06
WP_005285926.1 1134672 1135545 + 290PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.90E-37
1.10E-16
WP_005285924.1 1135792 1137997 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-75
3.70E-72
1.70E-08
WP_004653564.1 1138161 1138350 + 62PF00403HMAHeavy-metal-associated domain2.40E-12
WP_005285922.1 1138907 1138448 - 152PF09278
PF13411
PF00376
MerR-DNA-bind
MerR_1
MerR
MerR, DNA binding
MerR HTH family regulatory protein
MerR family regulatory protein
5.60E-21
3.90E-18
4.10E-16
WP_005285920.1 1141405 1138918 - 828PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
2.10E-58
1.10E-44
1.50E-36
3.00E-09
1.90E-05
WP_005285918.1 1142557 1141714 - 280PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.10E-48
4.00E-34
1.10E-10
WP_005285916.1 1144090 1142557 - 510PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.70E-21
1.10E-16
4.10E-13
1.00E-10
1.50E-08
WP_005285915.1 1144204 1145224 + 339PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.80E-33
1.60E-12
1.30E-06
WP_005285913.1 1145347 1146079 + 243PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
3.40E-18
1.10E-05
2.40E-04
WP_005285911.1 1146147 1147611 + 487PF01425AmidaseAmidase2.80E-87

Results for WP_031947779.1 [Acinetobacter lactucae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017386375.1 128115 128949 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.50E-48
2.00E-41
3.00E-13
WP_125738931.1 128971 130495 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.00E-15
5.60E-15
3.20E-13
1.00E-10
1.40E-07
WP_125738932.1 130608 131484 + 291PF04072LCMLeucine carboxyl methyltransferase4.20E-38
WP_125738933.1 132508 131494 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
5.00E-36
1.30E-14
4.40E-05
WP_125738934.1 132643 134131 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.60E-20
7.20E-17
2.10E-11
2.70E-11
9.10E-09
WP_125738935.1 134175 135030 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
7.40E-51
1.70E-36
1.60E-11
WP_125738936.1 135102 135996 + 297PF07859
PF10340
PF20434
PF00326
PF01738
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
DLH
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Dienelactone hydrolase family
1.50E-55
5.10E-11
1.00E-09
5.50E-06
1.70E-04
WP_125738937.1 136023 137694 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
1.00E-17
1.30E-09
2.60E-05
5.60E-05
WP_031947779.1 139957 137758 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-74
7.60E-73
2.00E-08
WP_125738938.1 141490 140209 - 426PF03573OprDouter membrane porin, OprD family5.40E-104
WP_125738939.1 142868 141521 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
2.30E-47
1.20E-24
7.10E-09
WP_125738940.1 143240 144926 + 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
2.20E-77
7.50E-06
8.10E-05
WP_125738950.1 144951 145905 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.70E-67
WP_125738941.1 145917 147105 + 395PF03573OprDouter membrane porin, OprD family3.30E-35
WP_125738942.1 147336 148413 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
3.80E-54
1.50E-18
1.30E-05
WP_125738943.1 148425 149370 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
1.70E-11
4.00E-06
WP_125738944.1 150106 149413 - 230PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
1.70E-11
7.10E-11

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_071088641.1 [Rhizobium sp. RMa-01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_071088657.1 25154 27116 + 653PF03764
PF00679
PF00009
PF14492
EFG_IV
EFG_C
GTP_EFTU
EFG_III
Elongation factor G, domain IV
Elongation factor G C-terminus
Elongation factor Tu GTP binding domain
Elongation Factor G, domain III
1.20E-39
2.40E-10
2.80E-09
8.50E-08
WP_071088655.1 27342 29460 + 705PF17804
PF03572
PF11818
PF00595
PF17820
TSP_NTD
Peptidase_S41
DUF3340
PDZ
PDZ_6
Tail specific protease N-terminal domain
Peptidase family S41
C-terminal domain of tail specific protease (DUF3340)
PDZ domain
PDZ domain
5.80E-59
5.20E-48
3.80E-34
1.60E-12
3.30E-05
WP_244511707.1 29573 29756 + 60PF08681DUF1778Protein of unknown function (DUF1778)2.90E-06
WP_071088651.1 30157 31054 + 298PF00990GGDEFDiguanylate cyclase, GGDEF domain1.80E-39
WP_071088649.1 31443 31074 - 122NO PFAM MATCH---
WP_071088647.1 31949 31472 - 158NO PFAM MATCH---
WP_244511706.1 33178 31969 - 402NO PFAM MATCH---
WP_071088643.1 33997 33232 - 254PF07812TfuATfuA-like protein4.80E-39
WP_071088641.1 35135 33986 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.30E-43
WP_071088639.1 38157 35154 - 1000PF13191
PF00211
AAA_16
Guanylate_cyc
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
1.00E-20
2.40E-20
WP_071088637.1 40953 38328 - 874PF00501AMP-bindingAMP-binding enzyme1.20E-50
WP_071088635.1 42904 41134 - 589PF07719
PF00515
PF14559
PF13428
PF13432
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.80E-23
3.00E-18
3.50E-14
4.50E-14
1.10E-13
WP_071088633.1 43875 43062 - 270PF00005
PF08352
PF00931
PF02463
PF13191
ABC_tran
oligo_HPY
NB-ARC
SMC_N
AAA_16
ABC transporter
Oligopeptide/dipeptide transporter, C-terminal region
NB-ARC domain
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.60E-26
4.20E-05
4.40E-04
4.60E-04
7.50E-04
WP_049732976.1 44861 43871 - 329PF00005
PF08352
PF13304
ABC_tran
oligo_HPY
AAA_21
ABC transporter
Oligopeptide/dipeptide transporter, C-terminal region
AAA domain, putative AbiEii toxin, Type IV TA system
7.80E-22
2.50E-19
3.00E-05
WP_049732975.1 45720 44862 - 285PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.30E-16
WP_049732974.1 46728 45723 - 334PF00528
PF19300
BPD_transp_1
BPD_transp_1_N
Binding-protein-dependent transport system inner membrane component
Binding-prot-dependent transport system membrane comp, N-term
1.50E-32
3.60E-05
WP_071088631.1 48755 46850 - 634PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle4.10E-49

Results for WP_012758598.1 [Rhizobium leguminosarum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_222051428.1 283239 286287 + 1015PF00535
PF01522
PF13641
PF05401
PF10111
Glycos_transf_2
Polysacc_deac_1
Glyco_tranf_2_3
NodS
Glyco_tranf_2_2
Glycosyl transferase family 2
Polysaccharide deacetylase
Glycosyltransferase like family 2
Nodulation protein S (NodS)
Glycosyltransferase like family 2
2.10E-33
9.80E-24
2.10E-19
2.30E-18
1.70E-15
WP_012758595.1 287325 286275 - 349PF00535
PF10111
PF13641
PF13506
PF13704
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_tranf_2_4
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 21
Glycosyl transferase family 2
2.10E-33
3.10E-30
1.20E-18
4.00E-07
1.20E-04
WP_041935567.1 287393 287789 + 131NO PFAM MATCH---
WP_017989161.1 287814 288189 + 125INFERRED GENE---
WP_128438247.1 289125 288876 - 82NO PFAM MATCH---
WP_003542083.1 289394 289601 + 68NO PFAM MATCH---
WP_012758596.1 290254 290005 - 82NO PFAM MATCH---
WP_012758597.1 291065 290357 - 235PF07812TfuATfuA-like protein1.10E-42
WP_012758598.1 292237 291061 - 391PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-63
WP_003561841.1 292492 292279 - 70NO PFAM MATCH---
WP_260686354.1 294351 292512 - 612PF14559TPR_19Tetratricopeptide repeat5.20E-04
WP_012758600.1 294795 294369 - 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.30E-12
4.20E-08
4.10E-07
6.30E-05
WP_012758601.1 295659 294966 - 230PF13489
PF08241
PF13649
PF08242
PF13847
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.10E-21
5.40E-16
7.60E-14
3.90E-11
9.00E-11
WP_017994918.1 296160 297051 + 296PF19495DUF6030Family of unknown function (DUF6030)2.10E-63
WP_012758603.1 297457 297082 - 124NO PFAM MATCH---
WP_026157451.1 297663 298737 + 357PF00331Glyco_hydro_10Glycosyl hydrolase family 101.70E-69
WP_012758605.1 298768 299920 + 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
2.00E-28
8.20E-25
6.50E-13
6.70E-09
4.00E-06

Results for WP_004964948.1 [Serratia odorifera] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004964926.1 4743494 4743323 - 56NO PFAM MATCH---
WP_039992268.1 4743687 4743486 - 66NO PFAM MATCH---
WP_004964931.1 4743898 4743676 - 73NO PFAM MATCH---
WP_241971989.1 4744152 4743870 - 93NO PFAM MATCH---
WP_081445086.1 4744358 4744544 + 61NO PFAM MATCH---
WP_197718869.1 4745562 4745055 - 168NO PFAM MATCH---
WP_004964939.1 4745975 4745690 - 94PF05930Phage_AlpAProphage CP4-57 regulatory protein (AlpA)8.60E-10
WP_128135983.1 4747113 4746333 - 259NO PFAM MATCH---
WP_004964944.1 4748429 4747199 - 409PF13356
PF00589
Arm-DNA-bind_3
Phage_integrase
Arm DNA-binding domain
Phage integrase family
1.70E-18
1.20E-17
WP_004964948.1 4748827 4750591 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.20E-83
4.30E-65
WP_004964949.1 4751031 4751889 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-75
WP_004964952.1 4751941 4754224 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.00E-207
1.30E-42
WP_004964954.1 4754522 4755263 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.80E-29
1.60E-18
5.90E-06
WP_039992270.1 4756461 4755315 - 381PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
2.50E-33
1.90E-13
5.60E-07
1.90E-06
WP_004964958.1 4757133 4756581 - 183PF12838
PF00037
PF13187
PF12837
PF13484
Fer4_7
Fer4
Fer4_9
Fer4_6
Fer4_16
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S double cluster binding domain
2.20E-13
6.90E-12
2.40E-09
1.10E-07
5.00E-06
WP_039992804.1 4757741 4757132 - 202PF02613Nitrate_red_delNitrate reductase delta subunit6.30E-28
WP_002209429.1 4757876 4758738 + 287INFERRED GENE---
NP_459941.1 4758739 4759358 + 206INFERRED GENE---

Results for WP_020843786.1 [Salmonella bongori serovar 40:z35:-] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_213892229.1 2811334 2809069 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.30E-50
9.70E-15
5.30E-05
WP_000167332.1 2811846 2811561 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140319.1 2813675 2812001 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000125010.1 2814472 2813788 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.50E-85
2.20E-07
2.10E-04
8.60E-04
9.60E-04
WP_213892230.1 2815406 2814644 - 253PF01435Peptidase_M48Peptidase family M483.80E-26
WP_079794481.1 2816833 2815549 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-151
WP_079773361.1 2817992 2816903 - 362PF00266Aminotran_5Aminotransferase class-V1.10E-70
WP_000642861.1 2818870 2818177 - 230PF04239DUF421Protein of unknown function (DUF421)9.60E-16
WP_020843786.1 2819005 2820766 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-81
1.30E-64
WP_079794482.1 2821170 2822028 + 285PF01226Form_Nir_transFormate/nitrite transporter8.40E-76
WP_001292826.1 2822084 2824367 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.40E-209
4.90E-44
WP_213892232.1 2824558 2825299 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-30
1.20E-18
3.10E-06
WP_239699273.1 2828488 2825485 - 1000PF11924
PF02369
PF09134
PF10670
PF13620
IAT_beta
Big_1
Invasin_D3
DUF4198
CarboxypepD_reg
Inverse autotransporter, beta-domain
Bacterial Ig-like domain (group 1)
Invasin, domain 3
Domain of unknown function (DUF4198)
Carboxypeptidase regulatory-like domain
2.30E-96
1.10E-80
5.50E-31
6.10E-13
6.60E-11
WP_213892236.1 2830870 2829448 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.20E-27
1.50E-10
WP_000109261.1 2832236 2831087 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
2.70E-27
2.20E-08
2.20E-07
WP_000526460.1 2833449 2832585 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.20E-117
WP_000213081.1 2834068 2833450 - 205PF13247
PF12797
PF00037
PF13187
PF12838
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.80E-28
6.00E-13
8.50E-13
1.30E-12
2.90E-11

Results for WP_005703702.1 [Aggregatibacter aphrophilus ATCC 33389] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005703712.1 589771 591544 + 590PF01019G_glu_transpeptGamma-glutamyltranspeptidase1.30E-189
WP_005703711.1 593471 592247 - 407PF00480
PF01047
ROK
MarR
ROK family
MarR family
4.40E-69
9.50E-05
WP_005703710.1 594838 593533 - 434PF05201
PF01488
PF00745
PF03435
GlutR_N
Shikimate_DH
GlutR_dimer
Sacchrp_dh_NADP
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
Saccharopine dehydrogenase NADP binding domain
2.50E-48
1.10E-45
7.40E-20
1.30E-04
WP_005703708.1 595855 595153 - 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.80E-16
1.60E-10
4.50E-06
WP_032995126.1 595875 596571 + 231PF08241
PF13489
PF13649
Methyltransf_11
Methyltransf_23
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.00E-10
2.10E-06
2.70E-05
WP_005703706.1 598136 596642 - 497PF02378
PF00367
PTS_EIIC
PTS_EIIB
Phosphotransferase system, EIIC
phosphotransferase system, EIIB
3.10E-77
1.10E-13
WP_005703705.1 598682 598349 - 110PF07411DUF1508Domain of unknown function (DUF1508)2.50E-38
WP_005703703.1 598885 600088 + 400PF20511PMI_typeI_catPhosphomannose isomerase type I, catalytic domain4.80E-32
WP_005703702.1 600186 601950 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-77
1.20E-63
WP_032995104.1 602118 602427 + 102PF07119DUF1375Protein of unknown function (DUF1375)2.00E-10
WP_032995103.1 602564 602972 + 135PF06295
PF11382
DUF1043
MctB
Protein of unknown function (DUF1043)
Copper transport outer membrane protein, MctB
5.90E-44
9.50E-04
WP_005702689.1 603149 603812 + 220PF01027Bax1-IInhibitor of apoptosis-promoting Bax19.80E-35
WP_005703700.1 603897 604227 + 109PF04358DsrCDsrC like protein2.40E-44
WP_050332759.1 604325 605207 + 293PF01297ZnuAZinc-uptake complex component A periplasmic2.50E-82
WP_005703696.1 605206 606097 + 296PF00005
PF13304
PF13555
PF02463
PF13558
ABC_tran
AAA_21
AAA_29
SMC_N
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RecF/RecN/SMC N terminal domain
SbcC/RAD50-like, Walker B motif
1.20E-29
1.80E-08
2.80E-06
5.50E-06
8.70E-04
WP_005703695.1 606096 606954 + 285PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
4.30E-88
2.40E-07
WP_050332757.1 606950 607799 + 282PF00950
PF01032
ABC-3
FecCD
ABC 3 transport family
FecCD transport family
1.70E-92
1.70E-07

Results for WP_042653613.1 [Aeromonas encheleia] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_042653606.1 1942617 1943334 + 238PF13085
PF13534
PF13237
PF13183
PF12838
Fer2_3
Fer4_17
Fer4_10
Fer4_8
Fer4_7
2Fe-2S iron-sulfur cluster binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.60E-30
1.40E-10
3.90E-08
7.60E-08
2.40E-04
WP_042653607.1 1943456 1946264 + 935PF02779
PF00676
PF16870
PF16078
Transket_pyr
E1_dh
OxoGdeHyase_C
2-oxogl_dehyd_N
Transketolase, pyrimidine binding domain
Dehydrogenase E1 component
2-oxoglutarate dehydrogenase C-terminal
2-oxoglutarate dehydrogenase N-terminus
9.60E-66
7.00E-52
1.10E-51
9.70E-17
WP_042653608.1 1946302 1947493 + 396PF00198
PF00364
PF02817
2-oxoacid_dh
Biotin_lipoyl
E3_binding
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
6.50E-83
1.70E-16
2.90E-15
WP_042653609.1 1947789 1948956 + 388PF08442
PF00549
PF13549
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
ATP-grasp domain
CoA-ligase
ATP-grasp domain
3.20E-81
3.90E-24
1.20E-14
WP_042653610.1 1948955 1949828 + 290PF02629
PF00549
PF13607
PF13380
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
CoA binding domain
CoA-ligase
Succinyl-CoA ligase like flavodoxin domain
CoA binding domain
4.50E-31
9.80E-21
6.80E-13
3.80E-04
WP_042653757.1 1950037 1950475 + 145PF03692CxxCxxCCPutative zinc- or iron-chelating domain8.20E-09
WP_042653758.1 1953265 1950982 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.60E-201
1.00E-42
WP_042653611.1 1954155 1953306 - 282PF01226Form_Nir_transFormate/nitrite transporter5.20E-75
WP_042653613.1 1956298 1954537 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.20E-79
3.30E-65
WP_042653614.1 1956643 1957342 + 232PF03483B3_4B3/4 domain1.70E-15
WP_025326753.1 1957903 1957588 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein4.30E-29
WP_042653615.1 1958231 1959344 + 370PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
2.00E-58
1.40E-22
WP_042653616.1 1959680 1959461 - 72PF00313
PF08206
CSD
OB_RNB
'Cold-shock' DNA-binding domain
Ribonuclease B OB domain
6.90E-29
4.20E-04
WP_005310725.1 1959909 1960227 + 105PF02617ClpSATP-dependent Clp protease adaptor protein ClpS3.00E-34
WP_042653617.1 1960287 1962540 + 750PF07724
PF17871
PF10431
PF00004
PF07728
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA domain (Cdc48 subfamily)
AAA lid domain
C-terminal, D2-small domain, of ClpB protein
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
1.50E-53
3.20E-29
1.10E-24
2.30E-23
9.80E-21
WP_005300033.1 1962828 1962609 - 72PF01176
PF16745
eIF-1a
RsgA_N
Translation initiation factor 1A / IF-1
RsgA N-terminal domain
2.20E-26
7.90E-04
WP_042653618.1 1963613 1962896 - 238PF04377
PF04376
PF13480
ATE_C
ATE_N
Acetyltransf_6
Arginine-tRNA-protein transferase, C terminus
Arginine-tRNA-protein transferase, N terminus
Acetyltransferase (GNAT) domain
4.50E-37
2.40E-17
8.00E-04

Results for WP_005601083.1 back to top

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Couldn't process WP_005601083.1 Genbank filestream. May be corrupt.

Results for WP_059178456.1 [Lelliottia amnigena] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_263093152.1 579135 576870 - 754PF03772
PF00753
PF12706
PF13567
Competence
Lactamase_B
Lactamase_B_2
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Domain of unknown function (DUF4131)
1.50E-49
2.20E-18
5.10E-06
8.00E-06
WP_263093179.1 579031 579277 + 81NO PFAM MATCH---
WP_012016828.1 579633 579345 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.20E-29
5.90E-08
9.60E-05
WP_059178452.1 581478 579804 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.50E-99
7.10E-12
8.60E-07
WP_012016826.1 582272 581588 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.00E-85
3.60E-08
7.60E-05
3.50E-04
7.80E-04
WP_263093153.1 583740 582456 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.60E-150
WP_059178454.1 584898 583809 - 362PF00266Aminotran_5Aminotransferase class-V1.60E-69
WP_202694083.1 585753 585060 - 230PF04239DUF421Protein of unknown function (DUF421)6.50E-15
WP_059178456.1 585893 587654 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.40E-83
4.10E-66
WP_012016821.1 588058 588916 + 285PF01226Form_Nir_transFormate/nitrite transporter4.90E-74
WP_131488389.1 588966 591249 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.00E-205
1.70E-43
WP_012016819.1 591453 592194 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.20E-32
8.10E-19
3.00E-06
WP_263093154.1 592737 592233 - 167NO PFAM MATCH---
WP_059178459.1 594009 592860 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
6.40E-29
2.80E-10
3.10E-06
6.50E-06
WP_059178460.1 595147 594283 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.90E-114
WP_263093155.1 595766 595148 - 205PF13247
PF12797
PF00037
PF13187
PF12838
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.30E-27
3.40E-13
5.40E-13
1.50E-12
2.00E-11
WP_263093156.1 598221 595776 - 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.00E-109
5.30E-28
2.00E-18

Results for WP_064512891.1 [Yersinia entomophaga] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_064512900.1 155640 153891 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
3.60E-60
6.90E-35
4.20E-11
7.50E-06
2.20E-04
WP_005159911.1 155675 157918 + 747INFERRED GENE---
WP_049596507.1 158693 158408 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.20E-28
3.70E-07
WP_049596508.1 160427 158753 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.00E-96
1.20E-11
9.00E-07
WP_014268505.1 160582 161334 + 250INFERRED GENE---
WP_064512896.1 162818 161531 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)8.10E-149
WP_064512894.1 164043 162957 - 361PF00266Aminotran_5Aminotransferase class-V5.90E-64
WP_064512892.1 165399 164361 - 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
5.40E-61
5.70E-26
WP_064512891.1 165548 167312 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.70E-81
1.60E-65
WP_064512889.1 167910 168768 + 285PF01226Form_Nir_transFormate/nitrite transporter3.90E-74
WP_064512887.1 168824 171107 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.30E-207
1.10E-43
WP_064512883.1 171527 172268 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.80E-31
8.70E-19
4.00E-06
WP_064512881.1 173465 172319 - 381PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
1.40E-27
3.20E-10
3.20E-06
1.50E-04
WP_064512879.1 175045 173749 - 431PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.10E-36
1.00E-30
WP_064512877.1 176509 175165 - 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
4.90E-64
5.00E-23
4.70E-16
2.80E-13
1.20E-06
WP_064512875.1 177128 176516 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
6.00E-59
2.70E-05
WP_064512873.1 181043 177452 - 1196PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
3.90E-72
5.00E-44
2.40E-28
2.30E-27
5.10E-05

Results for WP_064513791.1 [Yersinia entomophaga] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_120805591.1 1196266 1195699 - 188PF06821
PF12697
PF12146
PF00561
Ser_hydrolase
Abhydrolase_6
Hydrolase_4
Abhydrolase_1
Serine hydrolase
Alpha/beta hydrolase family
Serine aminopeptidase, S33
alpha/beta hydrolase fold
2.00E-55
1.80E-06
8.00E-06
9.20E-05
WP_120805496.1 1196903 1196312 - 196PF05708Peptidase_C92Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family1.20E-35
WP_064513780.1 1198495 1197067 - 475PF00282
PF01212
PF00266
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Pyridoxal-dependent decarboxylase conserved domain
Beta-eliminating lyase
Aminotransferase class-V
5.40E-98
3.40E-05
1.20E-04
WP_064513782.1 1199382 1198530 - 283PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamily7.50E-07
WP_064513785.1 1200555 1199880 - 224PF13419
PF00702
PF13242
HAD_2
Hydrolase
Hydrolase_like
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
5.10E-21
6.50E-13
1.90E-12
WP_064513786.1 1203066 1200723 - 780PF13208
PF15615
PF05099
TerB_N
TerB_C
TerB
TerB N-terminal domain
TerB-C domain
Tellurite resistance protein TerB
3.20E-51
5.30E-12
8.70E-06
WP_064513788.1 1203546 1204098 + 183PF01292Ni_hydr_CYTBProkaryotic cytochrome b5617.20E-23
WP_064513790.1 1204189 1204951 + 253PF13181
PF07719
PF00515
PF13424
TPR_8
TPR_2
TPR_1
TPR_12
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.80E-05
4.70E-05
2.30E-04
3.50E-04
WP_064513791.1 1205579 1206794 + 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.40E-27
WP_064513794.1 1206774 1207734 + 319PF13649
PF13847
PF08242
PF08241
PF13489
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_11
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.10E-09
5.30E-09
2.90E-07
5.40E-07
4.20E-06
WP_064513796.1 1207730 1208645 + 304PF12697
PF00561
PF12146
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
6.70E-07
2.70E-06
9.50E-05
WP_064513798.1 1210197 1208760 - 478PF00245
PF01676
Alk_phosphatase
Metalloenzyme
Alkaline phosphatase
Metalloenzyme superfamily
5.10E-126
1.50E-06
WP_064513802.1 1210991 1210511 - 159PF06445
PF14526
GyrI-like
Cass2
GyrI-like small molecule binding domain
Integron-associated effector binding protein
1.60E-26
2.40E-15
WP_015377972.1 1211300 1211994 + 231INFERRED GENE---
WP_064513804.1 1212242 1212761 + 172PF01035
PF02870
DNA_binding_1
Methyltransf_1N
6-O-methylguanine DNA methyltransferase, DNA binding domain
6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
7.80E-35
6.00E-08
WP_064513806.1 1212834 1213587 + 250PF13545
PF00325
PF00027
HTH_Crp_2
Crp
cNMP_binding
Crp-like helix-turn-helix domain
Bacterial regulatory proteins, crp family
Cyclic nucleotide-binding domain
2.50E-17
8.20E-16
2.10E-15
WP_064513808.1 1213722 1214688 + 321PF00582UspUniversal stress protein family9.60E-36

Results for WP_014919593.1 [Lactobacillus helveticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014919586.1 2032109 2030810 - 432PF00206
PF10397
Lyase_1
ADSL_C
Lyase
Adenylosuccinate lyase C-terminus
2.40E-66
6.30E-21
WP_014919587.1 2033402 2032112 - 429PF00709Adenylsucc_syntAdenylosuccinate synthetase3.70E-178
WP_041808856.1 2033599 2034592 + 330PF00478
PF01070
PF03060
PF00977
PF04309
IMPDH
FMN_dh
NMO
His_biosynth
G3P_antiterm
IMP dehydrogenase / GMP reductase domain
FMN-dependent dehydrogenase
Nitronate monooxygenase
Histidine biosynthesis protein
Glycerol-3-phosphate responsive antiterminator
5.00E-68
8.00E-06
8.20E-06
8.20E-05
2.40E-04
WP_014919589.1 2036084 2035028 - 351PF19200
PF05913
MupG_N
MupG_C
6-phospho-N-acetylmuramidase, N-terminal
6-phospho-N-acetylmuramidase, C-terminal
1.80E-76
3.10E-28
WP_014919590.1 2036518 2037532 + 337PF03590
PF00152
AsnA
tRNA-synt_2
Aspartate-ammonia ligase
tRNA synthetases class II (D, K and N)
8.30E-101
1.10E-05
WP_107805705.1 2038199 2037995 - 67NO PFAM MATCH---
WP_237023006.1 2039267 2038253 - 337PF13936
PF13384
PF00665
PF08281
PF13518
HTH_38
HTH_23
rve
Sigma70_r4_2
HTH_28
Helix-turn-helix domain
Homeodomain-like domain
Integrase core domain
Sigma-70, region 4
Helix-turn-helix domain
1.20E-18
7.10E-07
1.20E-05
1.30E-05
7.40E-05
WP_126096210.1 2040337 2039287 - 349PF13936
PF00665
PF13384
PF08281
PF02796
HTH_38
rve
HTH_23
Sigma70_r4_2
HTH_7
Helix-turn-helix domain
Integrase core domain
Homeodomain-like domain
Sigma-70, region 4
Helix-turn-helix domain of resolvase
7.20E-21
7.30E-06
4.50E-05
9.80E-05
2.00E-04
WP_014919593.1 2040978 2040420 - 185PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-05
WP_014919594.1 2041307 2041097 - 69NO PFAM MATCH---
WP_014919595.1 2042307 2041311 - 331PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-06
WP_014919596.1 2043115 2042308 - 268NO PFAM MATCH---
WP_230856773.1 2043520 2043115 - 134NO PFAM MATCH---
WP_014919598.1 2043951 2043591 - 119NO PFAM MATCH---
WP_014919599.1 2044660 2043943 - 238PF00005
PF13304
PF02463
PF13555
PF13476
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
6.80E-15
6.80E-15
5.50E-09
1.60E-04
2.20E-04
WP_003625061.1 2045388 2044656 - 243NO PFAM MATCH---
WP_020828930.1 2045715 2045442 - 90NO PFAM MATCH---

Results for WP_061018055.1 [Microbacterium sp. Beta] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046746898.1 88143 87126 - 338PF01497Peripla_BP_2Periplasmic binding protein4.80E-23
WP_137771802.1 88936 88153 - 260PF00005
PF13304
PF13191
PF02463
PF13555
ABC_tran
AAA_21
AAA_16
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
3.30E-32
3.90E-09
8.00E-05
2.40E-04
6.00E-04
WP_197077665.1 90078 88932 - 381PF01032FecCDFecCD transport family3.50E-92
WP_127011648.1 91865 90074 - 596PF00326
PF12146
Peptidase_S9
Hydrolase_4
Prolyl oligopeptidase family
Serine aminopeptidase, S33
3.00E-26
5.60E-05
WP_046746895.1 93064 91861 - 400NO PFAM MATCH---
WP_017831216.1 93174 93273 + 32NO PFAM MATCH---
WP_127011649.1 93358 94168 + 269NO PFAM MATCH---
WP_137771801.1 94164 95154 + 329PF02129
PF12146
PF00561
Peptidase_S15
Hydrolase_4
Abhydrolase_1
X-Pro dipeptidyl-peptidase (S15 family)
Serine aminopeptidase, S33
alpha/beta hydrolase fold
2.30E-15
4.20E-09
4.50E-04
WP_061018055.1 95150 96554 + 467PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-39
WP_137771800.1 96592 97597 + 334NO PFAM MATCH---
WP_164734071.1 97593 99237 + 547PF00005
PF00664
PF02463
PF13304
PF13555
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
7.20E-26
7.00E-13
6.70E-07
3.30E-05
2.20E-04
WP_127011652.1 99233 100928 + 564PF00005
PF00664
PF02463
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.70E-27
1.70E-14
9.70E-05
1.50E-04
WP_127011653.1 103440 100905 - 844PF12029
PF00270
PF00271
DUF3516
DEAD
Helicase_C
Domain of unknown function (DUF3516)
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.90E-191
5.80E-10
6.70E-06
WP_046746887.1 103609 105121 + 503PF00474SSFSodium:solute symporter family3.40E-97
WP_127011654.1 105884 105173 - 236PF01048PNP_UDP_1Phosphorylase superfamily8.00E-38
WP_046746885.1 106644 105984 - 219PF08713DNA_alkylationDNA alkylation repair enzyme2.60E-17
WP_127011655.1 107766 106728 - 345PF13515
PF06081
PF04632
FUSC_2
ArAE_1
FUSC
Fusaric acid resistance protein-like
Aromatic acid exporter family member 1
Fusaric acid resistance protein family
1.90E-17
3.70E-14
2.70E-08

Results for WP_054013400.1 back to top

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Couldn't process WP_054013400.1 Genbank filestream. May be corrupt.

Results for WP_009884134.1 [Brevibacterium aurantiacum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244223195.1 2812050 2810886 - 387PF14281PDDEXK_4PD-(D/E)XK nuclease superfamily2.60E-09
WP_069599718.1 2812242 2812482 + 80INFERRED GENE---
WP_127363091.1 2814184 2812903 - 426PF03480DctPBacterial extracellular solute-binding protein, family 71.40E-23
WP_101584570.1 2815917 2814324 - 530PF06808DctMTripartite ATP-independent periplasmic transporter, DctM component1.40E-75
WP_096162379.1 2816466 2815929 - 178PF04290DctQTripartite ATP-independent periplasmic transporters, DctQ component1.90E-20
WP_127363092.1 2817452 2816465 - 328PF03466
PF00126
PF12840
LysR_substrate
HTH_1
HTH_20
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
Helix-turn-helix domain
8.00E-25
2.20E-21
9.50E-06
WP_009884130.1 2817556 2818249 + 230PF01177Asp_Glu_raceAsp/Glu/Hydantoin racemase6.30E-38
WP_009884133.1 2820231 2819397 - 277PF00881NitroreductaseNitroreductase family2.50E-13
WP_009884134.1 2821638 2820243 - 464PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-68
WP_208649180.1 2822611 2822002 - 202NO PFAM MATCH---
WP_240516177.1 2823246 2822613 - 210NO PFAM MATCH---
WP_164743343.1 2824022 2823326 - 231PF08241
PF13649
PF13489
PF13847
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.50E-10
3.90E-08
1.60E-05
2.70E-04
WP_009884138.1 2824591 2824024 - 188NO PFAM MATCH---
WP_244223196.1 2825437 2825203 - 77NO PFAM MATCH---
WP_244223316.1 2825781 2825433 - 115NO PFAM MATCH---
CXR23_RS20705 2825972 2826038 + 22INFERRED GENE---
WP_226823944.1 2826357 2826144 - 70NO PFAM MATCH---

Results for WP_043122518.1 [Aeromonas hydrophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043122506.1 110949 109854 - 364PF00005
PF13304
PF08402
PF09818
PF02463
ABC_tran
AAA_21
TOBE_2
ABC_ATPase
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
TOBE domain
ATPase of the ABC class
RecF/RecN/SMC N terminal domain
3.00E-33
6.00E-08
1.20E-07
7.00E-06
7.00E-05
WP_043122508.1 112238 111218 - 339PF13343
PF13416
PF01547
PF13531
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
4.40E-29
5.50E-20
1.20E-15
6.30E-14
WP_043122510.1 113066 112358 - 235PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.60E-34
3.70E-19
WP_043122513.1 113319 114462 + 380PF00266Aminotran_5Aminotransferase class-V5.50E-23
WP_043122515.1 114458 115883 + 474PF00202Aminotran_3Aminotransferase class-III3.80E-75
WP_051773367.1 115875 116715 + 279PF00702Hydrolasehaloacid dehalogenase-like hydrolase3.20E-04
WP_196481571.1 119126 116837 - 762PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.60E-201
4.70E-43
WP_011705812.1 120014 119165 - 282PF01226Form_Nir_transFormate/nitrite transporter1.50E-73
WP_043122518.1 122155 120394 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-78
4.10E-65
WP_011705814.1 122597 122282 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.50E-29
WP_016350519.1 122936 124052 + 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
9.00E-59
5.30E-23
WP_043122521.1 124667 127445 + 925PF05193
PF00675
Peptidase_M16_C
Peptidase_M16
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
8.70E-37
1.00E-25
WP_017409610.1 128702 127538 - 387PF01053
PF00155
PF03841
PF00266
Cys_Met_Meta_PP
Aminotran_1_2
SelA
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
L-seryl-tRNA selenium transferase
Aminotransferase class-V
3.50E-134
1.50E-06
7.60E-05
1.70E-04
WP_043122524.1 129865 128794 - 356PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
1.50E-33
1.40E-18
WP_043122527.1 130973 130334 - 212PF13460
PF05368
PF03435
PF01370
PF01073
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
3Beta_HSD
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
5.10E-27
2.30E-09
2.80E-07
8.50E-07
3.10E-04
WP_043122530.1 131074 131980 + 301PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
5.80E-40
1.70E-21
4.30E-04
WP_016350525.1 132846 132105 - 246PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
7.10E-57
4.00E-55
7.50E-19
6.30E-08
2.20E-04

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001530487.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194821.1 back to top

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Couldn't process WP_000194821.1 Genbank filestream. May be corrupt.

Results for WP_001538156.1 back to top

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Couldn't process WP_001538156.1 Genbank filestream. May be corrupt.

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194826.1 [Salmonella enterica subsp. enterica serovar Sandiego] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000534679.1 78924 79788 + 287PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
1.20E-119
7.80E-04
WP_000109271.1 80137 81286 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_001134260.1 81503 82925 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
7.50E-14
WP_000067928.1 84004 83206 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 84122 84449 + 109INFERRED GENE---
WP_001145572.1 84579 85539 + 319PF11047SopDSalmonella outer protein D5.90E-180
WP_001292803.1 87893 85610 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-208
4.80E-44
WP_000642539.1 88810 87952 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_000194826.1 90975 89214 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.00E-82
3.30E-65
WP_000642868.1 91111 91804 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000079590.1 91989 93078 + 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000445190.1 93148 94432 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.10E-151
WP_000792301.1 94574 95336 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 95508 96192 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 96305 97979 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 98134 98419 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_071646054.1 98648 100913 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
5.20E-54
1.70E-14
5.00E-07

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_031564992.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_031565026.1 36518 34253 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.50E-54
1.70E-14
5.00E-07
WP_000167332.1 37032 36747 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 38861 37187 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_031564999.1 39658 38974 - 227PF02224
PF13189
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
8.80E-85
3.20E-07
4.10E-04
WP_000792301.1 40592 39830 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_031564996.1 42019 40735 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.60E-150
WP_000079585.1 43178 42089 - 362PF00266Aminotran_5Aminotransferase class-V1.90E-70
WP_000642870.1 44056 43363 - 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_031564992.1 44192 45953 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-82
6.20E-65
WP_223231476.1 46315 47215 + 299PF01226Form_Nir_transFormate/nitrite transporter4.10E-75
WP_001292803.1 47274 49557 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-208
4.80E-44
WP_001123024.1 50589 49635 - 317PF11047SopDSalmonella outer protein D5.80E-144
WP_077916004.1 50720 51047 + 108NO PFAM MATCH---
WP_000067928.1 51165 51963 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 53675 52253 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 55041 53892 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_065305163.1 56254 55390 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)6.30E-119

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Any response failure from Entrez database (error on database side)

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Any response failure from Entrez database (error on database side)

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023993632.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001549599.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000705799.1 64203 61938 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.00E-53
5.90E-15
1.60E-07
WP_000167332.1 64717 64432 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 66546 64872 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 67343 66659 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 68277 67515 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_031564996.1 69704 68420 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.60E-150
WP_000079590.1 70863 69774 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642870.1 71741 71048 - 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_001549599.1 71877 73638 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-82
1.40E-64
WP_197394329.1 74042 74900 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-75
WP_265280223.1 74959 77242 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-207
4.80E-44
WP_001145566.1 78273 77313 - 319PF11047SopDSalmonella outer protein D1.10E-182
NP_459946.1 78404 78730 + 108INFERRED GENE---
WP_000067928.1 78848 79646 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 81359 79937 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109272.1 82725 81576 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534685.1 83938 83074 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

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Any response failure from Entrez database (error on database side)

Results for WP_001667762.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_039520604.1 [Salmonella enterica subsp. enterica serovar Havana] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023254583.1 12252 13116 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.90E-118
WP_039520508.1 13465 14614 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.50E-28
4.70E-09
6.90E-07
3.80E-04
WP_001134264.1 14831 16253 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000067928.1 17343 16545 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 17461 17799 + 112INFERRED GENE---
WP_039520511.1 17930 18890 + 319PF11047SopDSalmonella outer protein D3.50E-176
WP_001292799.1 21245 18962 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 22162 21304 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_039520604.1 24327 22566 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.10E-82
5.80E-65
WP_000642868.1 24463 25156 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000079590.1 25341 26430 + 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_109161268.1 26500 27562 + 354PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.40E-120

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Any response failure from Entrez database (error on database side)

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001747674.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_023258722.1 [Salmonella enterica subsp. enterica serovar Ohio] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023258904.1 20855 21719 + 287PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
8.30E-119
7.20E-04
WP_000109271.1 22068 23217 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_023258905.1 23434 24856 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
8.20E-14
WP_000067928.1 25946 25148 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 26064 26401 + 112INFERRED GENE---
WP_052940807.1 26531 27491 + 319PF11047SopDSalmonella outer protein D2.40E-190
WP_001292799.1 29849 27566 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 30766 29908 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_023258722.1 32931 31170 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.30E-81
3.40E-65
WP_000642868.1 33067 33760 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023258721.1 33945 35034 + 362PF00266Aminotran_5Aminotransferase class-V6.30E-70
WP_001528800.1 35104 36388 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-149
WP_000792301.1 36530 37292 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 37464 38148 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 38261 39935 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 40090 40375 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_023258720.1 40604 42869 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.40E-14
1.80E-06

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Couldn't process WP_023356641.1 Genbank filestream. May be corrupt.

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001535017.1 [Salmonella enterica subsp. enterica serovar Weltevreden] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000167332.1 509 224 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140325.1 2338 664 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.20E-101
1.00E-11
5.50E-07
WP_000125007.1 3135 2451 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 4069 3307 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_001535014.1 5495 4211 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.20E-151
WP_000079590.1 6654 5565 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 7532 6839 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_001535017.1 7668 9429 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.80E-82
3.80E-65
WP_000642539.1 9833 10691 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 10750 13033 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_001145549.1 14068 13108 - 319PF11047SopDSalmonella outer protein D3.70E-195
NP_459946.1 14198 14535 + 112INFERRED GENE---
WP_000067928.1 14653 15451 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 17164 15742 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 18530 17381 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534681.1 19743 18879 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

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Couldn't process WP_001604262.1 Genbank filestream. May be corrupt.

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_042949447.1 [Salmonella enterica subsp. enterica serovar Havana] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024157330.1 71421 69156 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.50E-53
1.40E-14
5.00E-07
WP_000167332.1 71935 71650 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 73764 72090 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 74561 73877 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 75495 74733 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_023207375.1 76921 75637 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-150
WP_042949449.1 78080 76991 - 362PF00266Aminotran_5Aminotransferase class-V2.10E-70
WP_000642868.1 78958 78265 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_042949447.1 79094 80855 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-81
3.30E-65
WP_000642539.1 81259 82117 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 82176 84459 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_042949444.1 85491 84531 - 319PF11047SopDSalmonella outer protein D1.40E-178
NP_459946.1 85622 85960 + 112INFERRED GENE---
WP_000067928.1 86078 86876 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 88589 87167 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_042949441.1 89955 88806 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
4.80E-25
1.50E-08
8.10E-07
WP_000534681.1 91168 90304 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001518494.1 [Salmonella enterica subsp. enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058821527.1 71429 69164 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
6.20E-54
1.40E-14
5.00E-07
WP_000167332.1 71943 71658 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 73772 72098 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 74569 73885 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 75503 74741 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_058821528.1 76929 75645 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.00E-150
WP_000079591.1 78088 76999 - 362PF00266Aminotran_5Aminotransferase class-V3.20E-70
WP_000642868.1 78966 78273 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_001518494.1 79102 80863 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.50E-82
3.30E-65
WP_000642539.1 81267 82125 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 82184 84467 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_031624605.1 85498 84538 - 319PF11047SopDSalmonella outer protein D7.50E-178
NP_459946.1 85628 85965 + 112INFERRED GENE---
WP_000067928.1 86083 86881 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 88595 87173 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 89961 88812 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000441561.1 91113 90310 - 266PF04976DmsCDMSO reductase anchor subunit (DmsC)1.40E-107

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Any response failure from Entrez database (error on database side)

Results for WP_001597101.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023193417.1 2886897 2884632 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.50E-14
5.00E-07
WP_000167332.1 2887411 2887126 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 2889240 2887566 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125006.1 2890037 2889353 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.90E-85
1.70E-07
2.60E-04
8.50E-04
9.10E-04
WP_000792301.1 2890971 2890209 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000445184.1 2892397 2891113 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-149
WP_000079584.1 2893556 2892467 - 362PF00266Aminotran_5Aminotransferase class-V1.20E-69
WP_052929579.1 2894434 2893741 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_001597101.1 2894570 2896331 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.70E-82
3.40E-65
WP_000642539.1 2896735 2897593 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 2897652 2899935 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
NP_459947.1 2900010 2900975 + 321INFERRED GENE---
WP_010989001.1 2901105 2901432 + 108NO PFAM MATCH---
WP_000067973.1 2901550 2902348 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134268.1 2904062 2902640 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
3.40E-28
8.80E-14
WP_023261478.1 2905428 2904279 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.40E-24
9.90E-09
7.70E-07
2.70E-04
WP_000534681.1 2906641 2905777 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023993632.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023136935.1 back to top

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Couldn't process WP_023136935.1 Genbank filestream. May be corrupt.

Results for WP_023227167.1 back to top

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Couldn't process WP_023227167.1 Genbank filestream. May be corrupt.

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001538156.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023203923.1 back to top

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Couldn't process WP_023203923.1 Genbank filestream. May be corrupt.

Results for WP_001535017.1 [Salmonella enterica subsp. enterica serovar Weltevreden] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000167332.1 509 224 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140325.1 2338 664 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.20E-101
1.00E-11
5.50E-07
WP_000125007.1 3135 2451 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 4069 3307 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_001535014.1 5495 4211 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.20E-151
WP_000079590.1 6654 5565 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 7532 6839 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_001535017.1 7668 9429 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.80E-82
3.80E-65
WP_000642539.1 9833 10691 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 10750 13033 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_001145549.1 14068 13108 - 319PF11047SopDSalmonella outer protein D3.70E-195
NP_459946.1 14198 14535 + 112INFERRED GENE---
WP_000067928.1 14653 15451 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 17164 15742 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 18530 17381 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534681.1 19743 18879 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023234775.1 back to top

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Couldn't process WP_023234775.1 Genbank filestream. May be corrupt.

Results for WP_001804686.1 back to top

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Couldn't process WP_001804686.1 Genbank filestream. May be corrupt.

Results for WP_060938722.1 [Rhodococcus erythropolis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_060938718.1 83049 82362 - 228PF00881NitroreductaseNitroreductase family7.80E-17
WP_047889351.1 84034 83053 - 326PF01497Peripla_BP_2Periplasmic binding protein1.50E-24
WP_020968054.1 84825 84030 - 264PF00005
PF13304
PF02463
PF13191
PF13175
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
1.60E-29
3.20E-12
7.00E-07
1.40E-05
8.00E-05
WP_060938782.1 85889 84821 - 355PF01032FecCDFecCD transport family1.60E-96
WP_060938719.1 87234 85974 - 419PF05977
PF07690
MFS_3
MFS_1
Transmembrane secretion effector
Major Facilitator Superfamily
4.60E-31
3.00E-16
WP_003943543.1 87326 87515 + 62NO PFAM MATCH---
WP_060938720.1 87609 88422 + 270NO PFAM MATCH---
WP_245206743.1 88511 89846 + 444PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
1.00E-21
6.90E-09
WP_060938722.1 89838 91179 + 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-53
WP_060938723.1 91175 92468 + 430PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.10E-44
WP_060938724.1 93386 92414 - 323PF04321
PF03435
RmlD_sub_bind
Sacchrp_dh_NADP
RmlD substrate binding domain
Saccharopine dehydrogenase NADP binding domain
1.80E-05
9.80E-05
WP_019746303.1 93437 94064 + 208PF00440TetR_NBacterial regulatory proteins, tetR family2.70E-12
WP_003943598.1 94511 94070 - 146PF13426
PF13188
PF00989
PF08448
PAS_9
PAS_8
PAS
PAS_4
PAS domain
PAS domain
PAS fold
PAS fold
9.00E-10
1.40E-07
6.10E-07
9.20E-07
WP_020968047.1 95363 94622 - 246PF00005
PF02463
PF13604
PF13304
PF13555
ABC_tran
SMC_N
AAA_30
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
2.40E-32
1.80E-10
2.00E-07
2.70E-07
7.60E-06
WP_060938783.1 96406 95359 - 348PF02687FtsXFtsX-like permease family2.50E-11
WP_021332670.1 96520 97723 + 400PF07730
PF02518
PF13581
HisKA_3
HATPase_c
HATPase_c_2
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
2.00E-15
3.20E-07
5.80E-04
WP_019746299.1 97719 98337 + 205PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
1.00E-20
3.00E-20
1.20E-04

Results for WP_020930783.1 [Streptomyces albulus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_020930779.1 4668921 4668123 - 265NO PFAM MATCH---
WP_037635852.1 4670028 4669188 - 279PF04545
PF04542
PF04539
PF08281
PF13384
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma-70, region 4
Sigma-70 region 2
Sigma-70 region 3
Sigma-70, region 4
Homeodomain-like domain
2.70E-20
2.70E-17
1.70E-11
1.10E-09
7.30E-05
WP_016575579.1 4671028 4670218 - 269PF04542
PF04545
PF04539
PF08281
PF13384
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma-70 region 2
Sigma-70, region 4
Sigma-70 region 3
Sigma-70, region 4
Homeodomain-like domain
2.00E-18
3.10E-17
8.10E-15
5.60E-11
2.20E-06
WP_016574700.1 4671586 4671292 - 97PF07876DabbStress responsive A/B Barrel Domain4.90E-20
WP_016574699.1 4671807 4671642 - 54NO PFAM MATCH---
WP_016574698.1 4672433 4673219 + 261PF09900DUF2127Predicted membrane protein (DUF2127)1.10E-42
WP_016574697.1 4673247 4673727 + 159PF02009
PF04893
PF06679
RIFIN
Yip1
DUF1180
Rifin
Yip1 domain
Protein of unknown function (DUF1180)
4.20E-04
6.00E-04
7.30E-04
WP_020930782.1 4674128 4674248 + 39NO PFAM MATCH---
WP_020930783.1 4674336 4676460 + 707PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-68
WP_016572558.1 4676517 4677684 + 388PF00881NitroreductaseNitroreductase family9.20E-16
WP_016572557.1 4677888 4678665 + 258PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
1.30E-50
5.00E-42
1.90E-06
1.00E-05
3.10E-05
WP_016572556.1 4678763 4679507 + 247PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
1.00E-58
3.90E-47
1.20E-18
WP_016572555.1 4680402 4679514 - 295PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.60E-34
6.30E-21
WP_020930784.1 4681298 4680797 - 166PF14437
PF00383
PF14439
MafB19-deam
dCMP_cyt_deam_1
Bd3614-deam
MafB19-like deaminase
Cytidine and deoxycytidylate deaminase zinc-binding region
Bd3614-like deaminase
6.90E-30
4.40E-27
6.60E-05
WP_016572553.1 4681890 4681365 - 174NO PFAM MATCH---
WP_016572552.1 4682106 4682742 + 211PF14681
PF00156
UPRTase
Pribosyltran
Uracil phosphoribosyltransferase
Phosphoribosyl transferase domain
1.90E-64
1.90E-12
WP_078487174.1 4683455 4682813 - 213PF13399LytR_CLytR cell envelope-related transcriptional attenuator5.10E-17

Results for WP_042232264.1 [Paenibacillus chitinolyticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_042232280.1 59974 60172 + 65NO PFAM MATCH---
WP_042232278.1 60849 62595 + 581PF03235
PF04326
DUF262
AlbA_2
Protein of unknown function DUF262
Putative DNA-binding domain
8.50E-19
3.20E-08
WP_042232275.1 64104 63174 - 309PF00294
PF08543
PfkB
Phos_pyr_kin
pfkB family carbohydrate kinase
Phosphomethylpyrimidine kinase
8.20E-70
1.40E-12
WP_042232274.1 65151 64221 - 309PF01156IU_nuc_hydroInosine-uridine preferring nucleoside hydrolase5.40E-89
WP_042232271.1 66355 65173 - 393PF07662
PF01773
Nucleos_tra2_C
Nucleos_tra2_N
Na+ dependent nucleoside transporter C-terminus
Na+ dependent nucleoside transporter N-terminus
9.70E-60
3.20E-16
WP_042232268.1 66680 67775 + 364PF00294
PF13412
PF08543
PF08279
PF12802
PfkB
HTH_24
Phos_pyr_kin
HTH_11
MarR_2
pfkB family carbohydrate kinase
Winged helix-turn-helix DNA-binding
Phosphomethylpyrimidine kinase
HTH domain
MarR family
2.50E-55
1.90E-10
1.30E-08
2.10E-05
3.00E-04
WP_156972847.1 68371 68233 - 45NO PFAM MATCH---
WP_042232266.1 68700 70659 + 652NO PFAM MATCH---
WP_042232264.1 70655 72599 + 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-85
WP_042232262.1 72654 74235 + 526PF00881NitroreductaseNitroreductase family1.60E-17
WP_042232258.1 74815 74419 - 131PF00903
PF18029
Glyoxalase
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
4.00E-05
3.10E-04
WP_042232256.1 75663 75021 - 213PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
5.10E-40
5.30E-09
WP_042232255.1 76237 75763 - 157PF02627CMDCarboxymuconolactone decarboxylase family9.00E-15
WP_042232252.1 76428 77319 + 296PF04542
PF08281
PF12680
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma-70 region 2
Sigma-70, region 4
SnoaL-like domain
1.40E-12
2.50E-05
4.50E-04
WP_042232250.1 77585 78125 + 179PF08281
PF04542
PF04545
PF13412
PF00196
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_24
GerE
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
Bacterial regulatory proteins, luxR family
6.90E-16
1.80E-15
3.30E-10
9.30E-05
3.00E-04
WP_241688782.1 78114 79041 + 308NO PFAM MATCH---
WP_042232248.1 79342 79705 + 120NO PFAM MATCH---

Results for WP_012849012.1 [Edwardsiella piscicida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012849004.1 893913 892158 - 584PF00664
PF00005
PF02463
PF06414
PF13191
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
Zeta toxin
AAA ATPase domain
2.30E-56
5.30E-34
8.70E-11
5.30E-05
1.20E-04
WP_012849005.1 896214 893949 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.80E-53
4.30E-12
1.70E-10
WP_012849006.1 896767 896482 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.70E-29
2.90E-07
WP_012849007.1 898528 896854 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.40E-99
2.80E-12
1.00E-06
WP_012849008.1 899433 898755 - 225PF02224
PF13189
PF13671
PF13207
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_33
AAA_17
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.50E-79
3.30E-07
2.50E-05
8.30E-05
1.20E-04
WP_012849009.1 901031 899744 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.60E-142
WP_012849010.1 902309 901217 - 363PF00266Aminotran_5Aminotransferase class-V2.40E-60
WP_012849011.1 903616 902569 - 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.90E-64
3.90E-27
WP_012849012.1 903759 905520 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-79
5.50E-65
WP_015461817.1 905934 906792 + 285PF01226Form_Nir_transFormate/nitrite transporter2.70E-74
WP_012849014.1 906856 909139 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.60E-206
1.60E-43
WP_012849015.1 909401 910142 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.00E-30
2.30E-18
1.00E-05
WP_012849016.1 910814 910202 - 203PF00440TetR_NBacterial regulatory proteins, tetR family1.20E-12
WP_012849017.1 910922 911387 + 154PF04224DUF417Protein of unknown function, DUF4172.60E-31
WP_012849018.1 911383 911761 + 125PF00085
PF13899
PF00578
PF08534
PF13098
Thioredoxin
Thioredoxin_7
AhpC-TSA
Redoxin
Thioredoxin_2
Thioredoxin
Thioredoxin-like
AhpC/TSA family
Redoxin
Thioredoxin-like domain
9.50E-16
7.40E-09
4.40E-07
3.30E-05
3.50E-05
WP_012849019.1 911770 912499 + 242PF02683
PF13386
DsbD
DsbD_2
Cytochrome C biogenesis protein transmembrane region
Cytochrome C biogenesis protein transmembrane region
1.10E-18
1.50E-13
WP_012849020.1 912558 912828 + 89PF07338YdgH_BhsA-likeYdgH/BhsA/McbA-like domain3.20E-11

Results for WP_013610829.1 [Odoribacter splanchnicus DSM 20712] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013610839.1 145082 145286 + 67PF09413DUF2007Putative prokaryotic signal transducing protein2.20E-11
WP_013610838.1 145278 146094 + 271PF01148CTP_transf_1Cytidylyltransferase family8.50E-59
WP_013610837.1 146194 146851 + 218PF02666PS_DcarbxylasePhosphatidylserine decarboxylase4.70E-28
WP_013610836.1 146930 147746 + 271PF02548
PF13714
Pantoate_transf
PEP_mutase
Ketopantoate hydroxymethyltransferase
Phosphoenolpyruvate phosphomutase
4.20E-113
3.00E-05
WP_013610835.1 147871 148564 + 230PF00849PseudoU_synth_2RNA pseudouridylate synthase2.40E-29
WP_013610833.1 150053 148802 - 416PF13189
PF07690
Cytidylate_kin2
MFS_1
Cytidylate kinase-like family
Major Facilitator Superfamily
2.10E-48
1.60E-18
WP_181998482.1 150097 150463 + 121PF10543ORF6NORF6N domain2.60E-04
WP_013610832.1 153416 150524 - 963PF04851
PF00270
PF00176
ResIII
DEAD
SNF2-rel_dom
Type III restriction enzyme, res subunit
DEAD/DEAH box helicase
SNF2-related domain
8.80E-16
2.60E-08
2.30E-04
WP_013610831.1 154306 153394 - 303PF07751Abi_2Abi-like protein4.30E-47
WP_013610829.1 155432 157256 + 607PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.40E-53
WP_118104491.1 157242 159552 + 769PF13715
PF14905
PF13620
PF02369
CarbopepD_reg_2
OMP_b-brl_3
CarboxypepD_reg
Big_1
CarboxypepD_reg-like domain
Outer membrane protein beta-barrel family
Carboxypeptidase regulatory-like domain
Bacterial Ig-like domain (group 1)
7.70E-18
1.50E-16
5.90E-12
3.90E-04
WP_013610827.1 159573 160761 + 395PF03412
PF00664
Peptidase_C39
ABC_membrane
Peptidase C39 family
ABC transporter transmembrane region
3.00E-31
5.70E-21
LK432_RS00700 160772 160979 + 69INFERRED GENE---
WP_229032362.1 161183 160964 - 72PF13102Phage_int_SAM_5Phage integrase SAM-like domain5.10E-10
WP_083813711.1 161585 161234 - 116PF17293Arm-DNA-bind_5Arm DNA-binding domain1.30E-04
WP_013610825.1 162550 163111 + 186PF08281
PF04545
PF04542
PF00196
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma-70, region 4
Sigma-70, region 4
Sigma-70 region 2
Bacterial regulatory proteins, luxR family
5.30E-16
3.60E-10
1.50E-09
2.90E-05
WP_013610824.1 163176 164256 + 359PF16344
PF04773
DUF4974
FecR
Domain of unknown function (DUF4974)
FecR protein
1.00E-13
1.80E-13
WP_013610823.1 164367 167730 + 1120PF13715
PF00593
PF07715
PF13620
PF07660
CarbopepD_reg_2
TonB_dep_Rec
Plug
CarboxypepD_reg
STN
CarboxypepD_reg-like domain
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Carboxypeptidase regulatory-like domain
Secretin and TonB N terminus short domain
4.10E-20
7.60E-19
8.20E-15
1.60E-12
1.50E-05

Results for WP_002611795.1 [[Clostridium] innocuum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038274740.1 13379 13670 + 96NO PFAM MATCH---
WP_002611780.1 14620 14296 - 107PF02772S-AdoMet_synt_MS-adenosylmethionine synthetase, central domain3.00E-26
MKA52_RS20555 14773 15283 + 170INFERRED GENE---
WP_002611782.1 16571 15794 - 258PF04326AlbA_2Putative DNA-binding domain8.00E-16
WP_002611783.1 18599 16988 - 536PF00005
PF00664
PF13304
PF02463
PF13555
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
1.10E-20
2.70E-18
3.00E-07
2.10E-06
3.20E-04
WP_002611784.1 19408 18595 - 270PF00881NitroreductaseNitroreductase family2.70E-15
WP_002611787.1 20619 19704 - 304NO PFAM MATCH---
WP_157419525.1 21680 20699 - 326PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-07
WP_002611795.1 22806 21825 - 326PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-08
WP_038274744.1 23447 22802 - 214NO PFAM MATCH---
WP_002611798.1 24273 23439 - 277NO PFAM MATCH---
WP_002611800.1 24604 24382 - 73NO PFAM MATCH---
WP_002611802.1 24724 26419 + 564PF13155
PF16403
Toprim_2
DUF5011
Toprim-like
Domain of unknown function (DUF5011)
2.60E-11
1.60E-04
WP_002611804.1 27310 28771 + 486PF00239ResolvaseResolvase, N terminal domain1.50E-19
WP_002610674.1 29045 29435 + 130INFERRED GENE---
WP_002611808.1 30338 29759 - 192PF09515
PF12822
Thia_YuaJ
ECF_trnsprt
Thiamine transporter protein (Thia_YuaJ)
ECF transporter, substrate-specific component
2.40E-26
8.70E-07
WP_002608216.1 32528 31664 - 287PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
4.00E-20
3.10E-17

Results for WP_001538156.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_039495928.1 [Pectobacterium brasiliense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_039276326.1 2883914 2884652 + 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
1.10E-77
1.40E-08
1.50E-06
1.00E-05
1.60E-05
WP_010277156.1 2884633 2885410 + 258PF00977
PF03060
PF01207
His_biosynth
NMO
Dus
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
1.20E-73
4.10E-05
1.80E-04
WP_240348758.1 2885472 2886036 + 187PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
4.10E-31
1.00E-15
WP_005967571.1 2886480 2886195 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.80E-29
8.40E-07
9.80E-04
WP_010277167.1 2888243 2886569 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-95
1.60E-12
3.10E-06
WP_010277170.1 2889037 2888359 - 225PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.10E-81
1.20E-07
6.70E-06
6.80E-05
WP_268197390.1 2890547 2889257 - 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.40E-150
WP_268197391.1 2891714 2890628 - 361PF00266Aminotran_5Aminotransferase class-V5.60E-62
WP_039495928.1 2892043 2893807 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.10E-83
9.00E-68
WP_014915080.1 2894245 2895103 + 285PF01226Form_Nir_transFormate/nitrite transporter1.40E-73
WP_039468965.1 2895160 2897443 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.20E-207
1.50E-43
WP_010277183.1 2897712 2898453 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-30
8.50E-19
3.80E-06
WP_268197392.1 2900109 2898540 - 522PF05378
PF01968
PF13941
PF06406
PF14450
Hydant_A_N
Hydantoinase_A
MutL
StbA
FtsA
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
Cell division protein FtsA
2.80E-35
2.40E-31
2.20E-07
2.10E-04
4.00E-04
WP_268197393.1 2901229 2900119 - 369PF06032DUF917Protein of unknown function (DUF917)1.50E-126
WP_268197394.1 2902571 2901266 - 434PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin3.10E-18
WP_268197395.1 2902846 2903788 + 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.40E-15
5.50E-14
WP_039286987.1 2904928 2903773 - 384PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
1.30E-38
1.10E-06
1.90E-06
5.10E-05

Results for WP_001530487.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_059753713.1 [Agrobacterium deltaense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_059753640.1 253746 255165 + 472PF04932Wzy_CO-Antigen ligase1.00E-04
WP_059753643.1 255657 255174 - 160PF01272GreA_GreBTranscription elongation factor, GreA/GreB, C-term8.70E-17
WP_020811758.1 255934 257332 + 465PF00722
PF03935
PF00353
Glyco_hydro_16
SKN1_KRE6_Sbg1
HemolysinCabind
Glycosyl hydrolases family 16
Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1
RTX calcium-binding nonapeptide repeat (4 copies)
2.10E-34
7.50E-09
8.30E-06
WP_059753646.1 258325 257410 - 304PF01261AP_endonuc_2Xylose isomerase-like TIM barrel5.50E-35
WP_059753710.1 259090 258748 - 113NO PFAM MATCH---
WP_035261386.1 259711 259219 - 163NO PFAM MATCH---
WP_059753647.1 259883 261836 + 650PF03704
PF13414
BTAD
TPR_11
Bacterial transcriptional activator domain
TPR repeat
4.50E-24
5.30E-04
WP_059753650.1 261844 262273 + 142NO PFAM MATCH---
WP_059753713.1 262310 263507 + 398PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-49
WP_059753653.1 263503 264217 + 237PF07812TfuATfuA-like protein4.00E-41
WP_082710454.1 264213 265359 + 381NO PFAM MATCH---
WP_003520859.1 265485 265923 + 145PF01381
PF13560
PF12844
PF13443
HTH_3
HTH_31
HTH_19
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.30E-12
1.10E-10
3.40E-07
1.80E-06
WP_020811749.1 266017 266251 + 77NO PFAM MATCH---
WP_120357005.1 268791 266442 - 782PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
5.20E-155
1.10E-126
WP_059753655.1 269947 269164 - 260PF00005
PF13304
PF02463
PF09818
PF13604
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA domain
9.90E-30
4.60E-11
2.20E-06
1.70E-05
8.00E-05
WP_059753657.1 271279 269965 - 437PF02653BPD_transp_2Branched-chain amino acid transport system / permease component2.30E-26
WP_059753660.1 272563 271522 - 346PF13407
PF00532
Peripla_BP_4
Peripla_BP_1
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
2.70E-59
3.50E-07

Results for WP_064318002.1 [Bibersteinia trehalosi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_131927906.1 148291 149215 + 307PF01171ATP_bind_3PP-loop family3.40E-15
WP_025267118.1 149502 150873 + 456PF03553
PF13726
PF03600
PF03606
Na_H_antiporter
Na_H_antiport_2
CitMHS
DcuC
Na+/H+ antiporter family
Na+-H+ antiporter family
Citrate transporter
C4-dicarboxylate anaerobic carrier
3.50E-66
8.70E-23
5.30E-12
4.50E-04
WP_131927907.1 150937 151741 + 267PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family2.10E-23
WP_015432373.1 151911 152385 + 157PF04074DUF386YhcH/YjgK/YiaL4.00E-34
WP_025267115.1 152385 153252 + 288PF01418
PF01380
PF13580
HTH_6
SIS
SIS_2
Helix-turn-helix domain, rpiR family
SIS domain
SIS domain
6.50E-25
2.70E-24
1.50E-10
WP_015432375.1 153329 154211 + 293PF00701DHDPSDihydrodipicolinate synthetase family4.60E-99
WP_025267114.1 154399 154723 + 107PF03840SecGPreprotein translocase SecG subunit1.00E-19
WP_131927908.1 154873 155884 + 336PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.10E-08
6.60E-06
3.20E-05
WP_064318002.1 157684 155920 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.90E-78
2.00E-63
WP_015432380.1 157976 160103 + 708PF13597
PF01228
PF03477
NRDD
Gly_radical
ATP-cone
Anaerobic ribonucleoside-triphosphate reductase
Glycine radical
ATP cone domain
1.30E-181
1.50E-27
4.00E-22
WP_015432381.1 160115 160595 + 159PF13353
PF13394
Fer4_12
Fer4_14
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.00E-50
2.20E-34
WP_015432382.1 160689 162165 + 491PF10150
PF00575
RNase_E_G
S1
Ribonuclease E/G family
S1 RNA binding domain
1.30E-101
7.70E-06
WP_025267112.1 162350 163388 + 345PF13416
PF01547
PF13343
PF13531
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.90E-40
3.20E-30
1.40E-29
4.80E-10
WP_131927909.1 164282 163676 - 201PF08239SH3_3Bacterial SH3 domain1.50E-08
WP_131927910.1 165625 164362 - 420PF01384PHO4Phosphate transporter family1.40E-109
WP_015432386.1 166317 165636 - 226PF01865PhoU_divProtein of unknown function DUF472.40E-66
WP_131927911.1 166571 167555 + 327PF01409
PF02912
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA synthetases class II core domain (F)
Aminoacyl tRNA synthetase class II, N-terminal domain
8.10E-103
4.80E-27

Results for WP_000194825.1 back to top

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Couldn't process WP_000194825.1 Genbank filestream. May be corrupt.

Results for WP_040111608.1 [Rhizobium sophoriradicis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014765039.1 311377 311852 + 158INFERRED GENE---
WP_077989561.1 313305 312027 - 425PF13378
PF07476
PF02746
MR_MLE_C
MAAL_C
MR_MLE_N
Enolase C-terminal domain-like
Methylaspartate ammonia-lyase C-terminus
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
1.90E-60
7.90E-05
1.50E-04
WP_077989560.1 314205 313470 - 244PF13561
PF00106
PF01370
PF00107
PF08659
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
KR domain
3.10E-57
3.00E-44
2.30E-06
1.20E-04
2.00E-04
WP_009991484.1 314506 315292 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
2.60E-12
2.60E-11
4.80E-08
1.80E-06
5.20E-05
WP_077989559.1 315363 316200 + 278PF04909Amidohydro_2Amidohydrolase3.80E-41
WP_004668301.1 316471 316876 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.70E-07
3.30E-06
WP_040111606.1 317182 316915 - 88NO PFAM MATCH---
WP_077989558.1 317991 317247 - 247PF07812TfuATfuA-like protein1.40E-38
WP_040111608.1 319253 317987 - 421PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-64
WP_010041717.1 319410 319266 - 47NO PFAM MATCH---
WP_077989557.1 321467 319514 - 650PF03704
PF14559
PF00515
PF07719
PF13424
BTAD
TPR_19
TPR_1
TPR_2
TPR_12
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-14
1.30E-11
8.80E-09
4.60E-08
4.00E-07
WP_183738186.1 322693 321772 - 306PF01729
PF02749
PF13533
QRPTase_C
QRPTase_N
Biotin_lipoyl_2
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
Biotin-lipoyl like
6.90E-59
1.10E-27
3.50E-04
WP_077989555.1 324212 322670 - 513PF00890
PF07992
PF02910
PF01266
FAD_binding_2
Pyr_redox_2
Succ_DH_flav_C
DAO
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
Fumarate reductase flavoprotein C-term
FAD dependent oxidoreductase
1.60E-78
1.30E-04
1.60E-04
2.10E-04
WP_077989554.1 325180 324208 - 323PF02445NadAQuinolinate synthetase A protein6.00E-113
WP_183738191.1 326176 325249 - 308PF19368AraR_CAraR C-terminal winged HTH domain1.10E-07
WP_077989552.1 327330 326517 - 270PF02548Pantoate_transfKetopantoate hydroxymethyltransferase3.80E-43
WP_077989551.1 328586 327359 - 408PF07992
PF14759
PF00070
PF01266
PF01262
Pyr_redox_2
Reductase_C
Pyr_redox
DAO
AlaDh_PNT_C
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
Alanine dehydrogenase/PNT, C-terminal domain
2.90E-65
7.90E-21
2.30E-19
6.50E-06
8.20E-05

Results for WP_037258035.1 [Kibdelosporangium aridum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_037258014.1 122946 123846 + 299PF02424ApbEApbE family1.60E-45
WP_037258018.1 123842 124382 + 179PF01794Ferric_reductFerric reductase like transmembrane component1.00E-09
WP_051793767.1 124378 125635 + 418PF01512
PF10589
PF10531
Complex1_51K
NADH_4Fe-4S
SLBB
Respiratory-chain NADH dehydrogenase 51 Kd subunit
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SLBB domain
1.10E-29
2.00E-14
2.70E-04
WP_260478596.1 125631 125838 + 68PF13459
PF13370
Fer4_15
Fer4_13
4Fe-4S single cluster domain
4Fe-4S single cluster domain of Ferredoxin I
1.70E-11
3.90E-05
WP_037258026.1 125862 126864 + 333PF13377
PF00532
PF13407
PF00356
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
3.70E-33
7.60E-29
2.20E-18
4.40E-17
WP_051793768.1 127868 126947 - 306PF01183Glyco_hydro_25Glycosyl hydrolases family 251.40E-24
WP_037258029.1 128160 128730 + 189NO PFAM MATCH---
WP_125725852.1 129072 129294 + 73NO PFAM MATCH---
WP_037258035.1 129301 131581 + 759PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-99
WP_037258038.1 131608 133102 + 497PF00881NitroreductaseNitroreductase family6.30E-14
WP_185845471.1 133250 134405 + 384PF07730HisKA_3Histidine kinase2.40E-14
WP_033391670.1 135134 134528 - 201PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
8.60E-21
1.70E-15
3.20E-04
WP_125725854.1 135886 135340 - 181NO PFAM MATCH---
WP_037258654.1 136157 138842 + 894PF13191
PF00196
PF13424
PF13401
PF13466
AAA_16
GerE
TPR_12
AAA_22
STAS_2
AAA ATPase domain
Bacterial regulatory proteins, luxR family
Tetratricopeptide repeat
AAA domain
STAS domain
4.60E-17
3.70E-11
9.70E-06
1.30E-05
1.40E-04
WP_063758513.1 139756 138913 - 280PF00440
PF17940
PF13977
TetR_N
TetR_C_31
TetR_C_6
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
BetI-type transcriptional repressor, C-terminal
2.00E-09
1.00E-08
1.30E-05
WP_037258045.1 140025 141282 + 418PF00155Aminotran_1_2Aminotransferase class I and II1.30E-39
WP_221760853.1 141567 142314 + 248PF03707MHYTBacterial signalling protein N terminal repeat1.80E-30

Results for WP_053613371.1 [Streptomyces sp. MMS21 TC-5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_185557886.1 401369 402488 + 372PF00144Beta-lactamaseBeta-lactamase1.90E-65
WP_051734647.1 403085 402509 - 191PF01814HemerythrinHemerythrin HHE cation binding domain1.20E-14
WP_030651973.1 403252 403519 + 88PF14019DUF4235Protein of unknown function (DUF4235)3.00E-26
WP_053613374.1 403567 404110 + 180PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
4.30E-19
5.10E-11
WP_191868634.1 404240 406076 + 611PF00723
PF19291
Glyco_hydro_15
TREH_N
Glycosyl hydrolases family 15
Trehalase-like, N-terminal
6.10E-56
7.80E-16
WP_030651982.1 407054 406100 - 317PF07859
PF20434
Abhydrolase_3
BD-FAE
alpha/beta hydrolase fold
BD-FAE
2.10E-67
1.20E-16
WP_019434318.1 407578 409314 + 578INFERRED GENE---
WP_242707428.1 409476 411735 + 752PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.50E-14
WP_053613371.1 411724 413662 + 645PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-80
WP_242707429.1 413702 415268 + 521PF00881NitroreductaseNitroreductase family5.30E-18
WP_242707430.1 415281 418071 + 929PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.50E-42
WP_030652003.1 418058 419162 + 367PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.40E-94
WP_030652007.1 419158 420259 + 366PF02163Peptidase_M50Peptidase family M501.90E-04
WP_242707431.1 420321 421305 + 327PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.90E-28
2.00E-16
8.20E-07
8.90E-06
WP_030652012.1 421301 422057 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
9.90E-27
8.50E-18
WP_018890431.1 422197 423991 + 598INFERRED GENE---
WP_007268044.1 424240 424066 - 57NO PFAM MATCH---

Results for WP_026860848.1 [Pseudidiomarina sediminum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026860842.1 73677 74064 + 128PF11399DUF3192Protein of unknown function (DUF3192)1.90E-24
WP_026860843.1 74177 76019 + 613PF04546
PF04539
PF03979
PF04542
PF04545
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma-70, non-essential region
Sigma-70 region 3
Sigma-70 factor, region 1.1
Sigma-70 region 2
Sigma-70, region 4
5.80E-67
1.80E-29
3.10E-29
8.10E-22
3.70E-19
WP_241970488.1 76174 76969 + 264PF04909Amidohydro_2Amidohydrolase8.80E-13
WP_051206938.1 77479 78004 + 174NO PFAM MATCH---
WP_126775201.1 79247 78170 - 358PF00254
PF01346
FKBP_C
FKBP_N
FKBP-type peptidyl-prolyl cis-trans isomerase
Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
3.20E-22
8.60E-07
WP_026860845.1 81231 79416 - 604PF02872
PF00149
PF09587
5_nucleotid_C
Metallophos
PGA_cap
5'-nucleotidase, C-terminal domain
Calcineurin-like phosphoesterase
Bacterial capsule synthesis protein PGA_cap
1.30E-13
2.60E-08
1.70E-05
WP_026860846.1 81527 83894 + 788PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.00E-44
8.40E-17
WP_026860847.1 84269 83954 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein4.70E-30
WP_026860848.1 86591 84404 - 728PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.10E-77
7.10E-73
2.90E-09
WP_169513602.1 86768 88481 + 570PF00990
PF07695
PF07696
GGDEF
7TMR-DISM_7TM
7TMR-DISMED2
Diguanylate cyclase, GGDEF domain
7TM diverse intracellular signalling
7TMR-DISM extracellular 2
5.50E-48
3.80E-26
1.40E-07
WP_026860849.1 89518 88522 - 331PF00199CatalaseCatalase3.00E-23
WP_026860850.1 89641 90940 + 432PF07992
PF00070
PF01266
PF13454
PF13738
Pyr_redox_2
Pyr_redox
DAO
NAD_binding_9
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
FAD-NAD(P)-binding
Pyridine nucleotide-disulphide oxidoreductase
1.10E-58
9.30E-14
9.30E-07
9.80E-07
1.20E-06
WP_026860851.1 91034 92525 + 496PF00916
PF01740
PF16983
Sulfate_transp
STAS
MFS_MOT1
Sulfate permease family
STAS domain
Molybdate transporter of MFS superfamily
4.50E-58
6.20E-09
7.80E-05
WP_026860852.1 92541 93390 + 282PF00582UspUniversal stress protein family9.70E-27
WP_026860853.1 93957 93450 - 168PF06127Mpo1-like2-hydroxy-palmitic acid dioxygenase Mpo1-like6.20E-27
WP_026860854.1 94039 95104 + 354PF01594AI-2E_transportAI-2E family transporter2.40E-51
WP_026860855.1 96215 95090 - 374PF02353
PF13489
PF13649
PF08241
PF08242
CMAS
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_12
Mycolic acid cyclopropane synthetase
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
5.80E-90
2.10E-15
1.40E-13
9.70E-12
1.10E-07

Results for WP_016077960.1 back to top

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Couldn't process WP_016077960.1 Genbank filestream. May be corrupt.

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_071087005.1 back to top

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Couldn't process WP_071087005.1 Genbank filestream. May be corrupt.

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_071088855.1 [Rhizobium sp. RMa-01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_071088818.1 18553 17704 - 282PF01061ABC2_membraneABC-2 type transporter5.40E-18
WP_071088816.1 18668 21692 + 1007PF00535
PF01522
PF05401
PF13641
PF10111
Glycos_transf_2
Polysacc_deac_1
NodS
Glyco_tranf_2_3
Glyco_tranf_2_2
Glycosyl transferase family 2
Polysaccharide deacetylase
Nodulation protein S (NodS)
Glycosyltransferase like family 2
Glycosyltransferase like family 2
1.00E-32
5.70E-24
4.30E-18
6.20E-17
4.00E-15
WP_071088856.1 22730 21680 - 349PF00535
PF10111
PF13641
PF13506
PF13704
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_tranf_2_4
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 21
Glycosyl transferase family 2
6.00E-34
2.70E-30
5.90E-19
4.70E-07
1.50E-05
WP_020051248.1 22884 23395 + 170INFERRED GENE---
WP_071088813.1 23391 24516 + 374PF00535
PF10111
PF13641
PF13704
PF13632
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Glyco_trans_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 2
Glycosyl transferase family group 2
1.00E-33
4.00E-23
2.30E-20
2.60E-05
5.00E-04
WP_012558648.1 25724 25931 + 68NO PFAM MATCH---
WP_049733766.1 26698 26449 - 82NO PFAM MATCH---
WP_049733765.1 27508 26800 - 235PF07812TfuATfuA-like protein4.20E-41
WP_071088855.1 28695 27504 - 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.40E-65
WP_049733764.1 29453 29027 - 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.60E-12
1.00E-07
6.30E-07
1.70E-04
WP_071088811.1 30334 29701 - 210PF13489
PF08241
PF13649
PF08242
PF13847
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-23
1.90E-16
1.60E-14
3.50E-12
1.80E-11
WP_049733807.1 30838 31726 + 295PF19495DUF6030Family of unknown function (DUF6030)7.80E-63
WP_049733762.1 32142 31767 - 124NO PFAM MATCH---
WP_071088809.1 32346 33420 + 357PF00331Glyco_hydro_10Glycosyl hydrolase family 107.40E-67
WP_071088807.1 33451 34603 + 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
3.50E-28
3.30E-24
3.80E-12
3.40E-08
3.40E-06
WP_049733759.1 34602 35109 + 168PF14602
PF00132
Hexapep_2
Hexapep
Hexapeptide repeat of succinyl-transferase
Bacterial transferase hexapeptide (six repeats)
3.40E-15
1.10E-11
WP_071088805.1 35105 36008 + 300PF04230PS_pyruv_transPolysaccharide pyruvyl transferase9.00E-08

Results for WP_025912935.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_000912283.1 [Helicobacter pylori] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_231627288.1 8315 7433 - 293PF00899ThiFThiF family3.60E-22
WP_197298275.1 10746 8763 - 660PF03432RelaxaseRelaxase/Mobilisation nuclease domain1.50E-14
WP_197298276.1 11083 10735 - 115PF05713MobCBacterial mobilisation protein (MobC)1.70E-06
WP_197298277.1 11243 11525 + 93NO PFAM MATCH---
WP_197298278.1 11533 11803 + 89PF15738
PF05016
YafQ_toxin
ParE_toxin
Bacterial toxin of type II toxin-antitoxin system, YafQ
ParE toxin of type II toxin-antitoxin system, parDE
1.30E-27
1.50E-08
WP_000271050.1 11832 12107 + 91INFERRED GENE---
WP_001941815.1 12214 12406 + 63NO PFAM MATCH---
WP_197298279.1 12406 13321 + 304NO PFAM MATCH---
WP_000912283.1 13320 14643 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-39
WP_000592968.1 14654 15476 + 273PF00881NitroreductaseNitroreductase family1.00E-08
WP_231627287.1 15459 16602 + 380NO PFAM MATCH---

Results for WP_001934599.1 [Helicobacter pylori] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_127964962.1 49849 48685 - 387PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
1.10E-19
1.60E-04
WP_232256218.1 50937 49860 - 358PF00899ThiFThiF family1.10E-21
WP_187928724.1 53207 51191 - 671PF03432RelaxaseRelaxase/Mobilisation nuclease domain5.80E-16
WP_187928725.1 53544 53196 - 115PF05713MobCBacterial mobilisation protein (MobC)8.10E-07
WP_187928726.1 53704 53986 + 93NO PFAM MATCH---
WP_187928727.1 53994 54264 + 89PF15738
PF05016
YafQ_toxin
ParE_toxin
Bacterial toxin of type II toxin-antitoxin system, YafQ
ParE toxin of type II toxin-antitoxin system, parDE
9.60E-29
1.80E-08
WP_001941815.1 54675 54867 + 63NO PFAM MATCH---
WP_232256220.1 54867 55521 + 217NO PFAM MATCH---
WP_001934599.1 55781 57104 + 440PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-39
WP_187928728.1 57115 57937 + 273PF00881NitroreductaseNitroreductase family9.90E-09
WP_232256221.1 57920 59063 + 380NO PFAM MATCH---
WP_097681738.1 59052 59754 + 233PF00005
PF13304
PF02463
PF13401
PF13555
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
3.50E-18
7.50E-10
1.90E-08
1.70E-05
3.20E-05
WP_001973251.1 59753 60509 + 252INFERRED GENE---
WP_187928730.1 70135 60571 - 3187PF03077VacA2Putative vacuolating cytotoxin9.80E-93
WP_000716810.1 70865 70295 - 189PF01856
PF13505
HP_OMP
OMP_b-brl
Helicobacter outer membrane protein
Outer membrane protein beta-barrel domain
1.10E-08
4.40E-06
WP_187928731.1 73948 70861 - 1028PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
0.00E+00
2.70E-14
WP_000984715.1 74665 73960 - 234PF13437
PF16576
PF13533
PF00364
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Biotin-requiring enzyme
4.60E-15
1.00E-11
1.80E-06
2.50E-04

Results for WP_064379257.1 [Klebsiella michiganensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_047724196.1 120576 119778 - 265PF00456
PF13292
PF00676
PF02775
PF09364
Transketolase_N
DXP_synthase_N
E1_dh
TPP_enzyme_C
XFP_N
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
XFP N-terminal domain
7.50E-44
1.80E-14
2.70E-06
3.10E-04
5.20E-04
WP_219655794.1 121830 120588 - 413PF03611EIIC-GATPTS system sugar-specific permease component7.30E-119
WP_032749742.1 123026 121832 - 397PF01609DDE_Tnp_1Transposase DDE domain2.30E-21
WP_014228635.1 123469 123193 - 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit3.70E-12
WP_014837957.1 123591 124449 + 285PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
5.30E-16
1.20E-08
WP_004871674.1 125244 124503 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.60E-32
8.10E-19
2.70E-06
WP_064379255.1 127730 125447 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.80E-205
1.80E-43
YP_005226112.1 127781 128639 + 286INFERRED GENE---
WP_064379257.1 130786 129025 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-82
1.20E-66
WP_014228639.1 130900 131593 + 230PF04239DUF421Protein of unknown function (DUF421)7.20E-15
WP_004849472.1 131779 132868 + 362PF00266Aminotran_5Aminotransferase class-V1.80E-68
WP_004849473.1 132941 134225 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-152
WP_004849475.1 134517 135201 + 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
5.70E-82
2.00E-07
WP_004100702.1 135338 137012 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-98
7.70E-12
1.00E-06
WP_004100704.1 137162 137450 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.10E-08
9.30E-05
WP_032748908.1 137665 139921 + 751PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
4.70E-47
9.60E-19
6.20E-04
9.20E-04
WP_032748909.1 139966 141715 + 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
2.00E-59
4.90E-36
1.80E-10
5.60E-06
4.90E-05

Results for WP_010674506.1 [Aeromonas sp. QDB30] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032491559.1 0 388 + 129INFERRED GENE---
WP_203762095.1 613 1069 + 151PF03692CxxCxxCCPutative zinc- or iron-chelating domain3.10E-09
WP_010674504.1 4017 1734 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-201
4.60E-43
WP_010674505.1 4907 4058 - 282PF01226Form_Nir_transFormate/nitrite transporter2.50E-74
WP_010674506.1 7050 5289 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-79
1.00E-64
WP_039039002.1 7385 8069 + 227PF03483B3_4B3/4 domain3.10E-16
WP_041211362.1 8600 8285 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein2.10E-29
WP_103243235.1 8939 10052 + 370PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.20E-58
6.90E-23
WP_010674510.1 10387 10168 - 72PF00313
PF08206
CSD
OB_RNB
'Cold-shock' DNA-binding domain
Ribonuclease B OB domain
3.20E-28
8.70E-04
WP_124245184.1 10615 10933 + 105PF02617ClpSATP-dependent Clp protease adaptor protein ClpS2.30E-34
WP_128273140.1 10993 13246 + 750PF07724
PF17871
PF10431
PF00004
PF07728
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA domain (Cdc48 subfamily)
AAA lid domain
C-terminal, D2-small domain, of ClpB protein
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
2.60E-53
7.30E-29
1.40E-24
1.20E-23
1.20E-20
WP_005300033.1 13534 13315 - 72PF01176
PF16745
eIF-1a
RsgA_N
Translation initiation factor 1A / IF-1
RsgA N-terminal domain
2.20E-26
7.90E-04
WP_010674512.1 14319 13602 - 238PF04377
PF04376
PF13480
ATE_C
ATE_N
Acetyltransf_6
Arginine-tRNA-protein transferase, C terminus
Arginine-tRNA-protein transferase, N terminus
Acetyltransferase (GNAT) domain
8.30E-38
7.30E-18
9.80E-05

Results for WP_018246199.1 back to top

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Couldn't process WP_018246199.1 Genbank filestream. May be corrupt.

Results for WP_018243193.1 back to top

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Couldn't process WP_018243193.1 Genbank filestream. May be corrupt.

Results for WP_062777569.1 [Kluyvera intermedia] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_062777555.1 2981057 2979308 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
7.10E-59
2.30E-35
4.30E-10
5.60E-06
5.40E-04
WP_153743259.1 2983355 2981093 - 753PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
8.00E-44
1.20E-19
2.50E-04
WP_062777559.1 2983857 2983572 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
3.20E-29
3.10E-08
2.50E-04
WP_062777561.1 2985682 2984008 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.50E-99
1.40E-11
7.50E-07
WP_153743260.1 2986481 2985797 - 227PF02224
PF13189
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
1.20E-83
4.80E-07
6.10E-04
WP_153743261.1 2987946 2986662 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.80E-150
WP_153743262.1 2989107 2988018 - 362PF00266Aminotran_5Aminotransferase class-V4.90E-71
WP_062777567.1 2989962 2989269 - 230PF04239DUF421Protein of unknown function (DUF421)8.60E-15
WP_062777569.1 2990089 2991850 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.40E-82
1.30E-65
WP_062777571.1 2992253 2993111 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-74
WP_062777573.1 2993166 2995449 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.00E-204
3.20E-43
WP_062777575.1 2995653 2996394 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
8.40E-32
2.30E-18
1.80E-06
WP_153743263.1 2997940 2996521 - 472PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
4.40E-28
2.90E-12
WP_153743264.1 2999279 2998127 - 383PF07690
PF06779
PF00083
PF05977
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_3
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
Transmembrane secretion effector
MFS_1 like family
3.70E-30
1.80E-09
3.50E-08
1.60E-04
6.50E-04
WP_153743265.1 3000404 2999540 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.10E-109
WP_153743266.1 3001023 3000405 - 205PF13247
PF12797
PF13187
PF12838
PF00037
Fer4_11
Fer4_2
Fer4_9
Fer4_7
Fer4
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
8.40E-28
4.10E-13
1.10E-12
3.00E-12
5.10E-12
WP_153744061.1 3003439 3001033 - 801PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.60E-80
6.50E-27
5.40E-14

Results for WP_004150842.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_024165588.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000705752.1 158111 155846 - 754PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
2.40E-50
1.90E-19
WP_000167336.1 158602 158317 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 160435 158761 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 161229 160545 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_001308530.1 162166 161401 - 254PF01435Peptidase_M48Peptidase family M481.40E-26
WP_000445209.1 163618 162334 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.80E-150
WP_000057130.1 164777 163688 - 362PF00266Aminotran_5Aminotransferase class-V5.60E-76
WP_000642852.1 165668 164975 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_024165588.1 165797 167558 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-83
8.40E-66
WP_001140910.1 168005 168821 + 271PF01226Form_Nir_transFormate/nitrite transporter9.10E-75
WP_001292809.1 168875 171158 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.90E-208
1.60E-43
WP_000111043.1 171349 172090 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
NP_415420.1 172188 172299 + 37INFERRED GENE---
WP_000918505.1 173730 172299 - 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
6.50E-28
1.00E-12
WP_000109291.1 175088 173939 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
4.70E-27
4.40E-10
1.10E-06
WP_000165876.1 175402 176029 + 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_000534628.1 176928 176064 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)7.70E-123

Results for WP_026426216.1 [Actinomyces slackii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_126412096.1 578637 579420 + 260PF13359
PF01609
PF13613
PF13545
DDE_Tnp_4
DDE_Tnp_1
HTH_Tnp_4
HTH_Crp_2
DDE superfamily endonuclease
Transposase DDE domain
Helix-turn-helix of DDE superfamily endonuclease
Crp-like helix-turn-helix domain
3.70E-22
1.10E-09
7.30E-07
2.60E-04
WP_034514607.1 580825 579907 - 305PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.50E-26
WP_026426212.1 583350 580824 - 841PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.50E-04
WP_026426213.1 584531 583346 - 394NO PFAM MATCH---
EL266_RS13610 584723 584816 + 31INFERRED GENE---
WP_051280928.1 585737 584966 - 256NO PFAM MATCH---
WP_026426214.1 587469 585726 - 580NO PFAM MATCH---
WP_034514608.1 588090 587469 - 206NO PFAM MATCH---
WP_026426216.1 589465 588115 - 449PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-65
WP_034514609.1 589735 590440 + 234PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
2.10E-16
4.80E-16
2.70E-04
WP_026426217.1 591347 590528 - 272NO PFAM MATCH---
WP_026426218.1 591461 591743 + 93PF02583Trns_repr_metalMetal-sensitive transcriptional repressor2.60E-30
WP_026426219.1 591784 592054 + 89PF00403HMAHeavy-metal-associated domain6.50E-13
WP_034514610.1 592062 594579 + 838PF00122
PF00702
PF00403
PF08282
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
1.20E-48
4.20E-37
1.50E-13
3.40E-04
WP_269471444.1 596018 594803 - 404PF19407DUF5979Domain of unknown function (DUF5979)1.30E-24
WP_026426222.1 597943 596971 - 323PF00756EsterasePutative esterase4.40E-42
WP_026426223.1 598315 601060 + 914PF03706
PF06293
LPG_synthase_TM
Kdo
Lysylphosphatidylglycerol synthase TM region
Lipopolysaccharide kinase (Kdo/WaaP) family
7.80E-38
2.60E-06

Results for WP_061787443.1 [Arachnia propionica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041696013.1 60507 60753 + 81PF04023FeoAFeoA domain1.30E-16
WP_197720309.1 60809 62690 + 626PF02421
PF07670
PF07664
PF01926
FeoB_N
Gate
FeoB_C
MMR_HSR1
Ferrous iron transport protein B
Nucleoside recognition
Ferrous iron transport protein B C terminus
50S ribosome-binding GTPase
2.80E-40
9.20E-33
7.90E-18
7.20E-12
WP_014845216.1 62686 63265 + 192PF01106NifUNifU-like domain4.90E-16
WP_014845217.1 64138 63664 - 157NO PFAM MATCH---
WP_061787447.1 65472 64203 - 422PF02720
PF01844
DUF222
HNH
Domain of unknown function (DUF222)
HNH endonuclease
5.10E-12
1.00E-04
WP_061787446.1 66392 65618 - 257PF00455
PF08220
DeoRC
HTH_DeoR
DeoR C terminal sensor domain
DeoR-like helix-turn-helix domain
6.60E-38
1.40E-10
WP_061787445.1 66421 67237 + 271PF08282
PF05116
PF00702
Hydrolase_3
S6PP
Hydrolase
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
haloacid dehalogenase-like hydrolase
1.50E-46
2.80E-14
2.00E-04
WP_061787444.1 68135 67412 - 240PF00881NitroreductaseNitroreductase family1.30E-16
WP_061787443.1 69378 68139 - 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-43
WP_041696018.1 69874 69403 - 156NO PFAM MATCH---
WP_061787442.1 70725 70005 - 239NO PFAM MATCH---
WP_061787441.1 70790 71570 + 259PF01497Peripla_BP_2Periplasmic binding protein2.20E-04
WP_197720278.1 72742 71524 - 405PF07690
PF06779
PF05977
PF00083
MFS_1
MFS_4
MFS_3
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Transmembrane secretion effector
Sugar (and other) transporter
3.10E-41
5.80E-11
4.40E-07
1.20E-06
WP_014845226.1 72943 73297 + 117PF12840
PF01022
HTH_20
HTH_5
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
1.70E-10
1.90E-06
WP_244926130.1 73862 73979 + 38PF01402RHH_1Ribbon-helix-helix protein, copG family9.30E-09
WP_061787437.1 74033 74225 + 63NO PFAM MATCH---
WP_061787436.1 75499 74287 - 403PF02655ATP-grasp_3ATP-grasp domain5.50E-04

Results for WP_061787600.1 [Arachnia propionica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_159424543.1 3077643 3077802 + 52NO PFAM MATCH---
WP_061787605.1 3078060 3079206 + 381PF06114Peptidase_M78IrrE N-terminal-like domain1.80E-14
WP_126409491.1 3079730 3079184 - 181NO PFAM MATCH---
WP_126409493.1 3081244 3079900 - 447NO PFAM MATCH---
WP_013350322.1 3081636 3082932 + 432INFERRED GENE---
WP_244926158.1 3083250 3082887 - 120PF01527HTH_Tnp_1Transposase1.90E-07
WP_061787602.1 3083681 3084395 + 237NO PFAM MATCH---
WP_061787601.1 3084391 3085936 + 514PF02129
PF08530
PF12146
Peptidase_S15
PepX_C
Hydrolase_4
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Serine aminopeptidase, S33
7.40E-32
7.20E-07
4.40E-04
WP_061787600.1 3085932 3087303 + 456PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-47
WP_061787599.1 3087314 3088424 + 369PF00881NitroreductaseNitroreductase family1.80E-04
WP_061787598.1 3088420 3090181 + 586PF00005
PF00664
PF02463
PF09818
PF13191
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA ATPase domain
1.10E-30
1.50E-17
1.30E-06
4.30E-05
5.20E-04
WP_061787597.1 3090170 3091979 + 602PF00005
PF00664
PF13191
PF02463
PF03193
ABC_tran
ABC_membrane
AAA_16
SMC_N
RsgA_GTPase
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
RsgA GTPase
2.30E-28
2.90E-13
2.30E-05
5.40E-05
1.70E-04
WP_061787720.1 3092758 3091975 - 260PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.20E-30
3.00E-09
2.80E-07
1.70E-04
WP_061787596.1 3093762 3092763 - 332PF01032FecCDFecCD transport family5.30E-52
WP_061787595.1 3094706 3093758 - 315PF01032FecCDFecCD transport family3.20E-54
WP_073970026.1 3095719 3094705 - 337PF01497Peripla_BP_2Periplasmic binding protein5.40E-21
WP_061787593.1 3096043 3096769 + 241PF13649
PF08241
PF08242
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.30E-08
1.90E-06
5.20E-06
7.60E-05

Results for WP_000194830.1 [Escherichia coli 536] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000850288.1 954740 957185 + 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
4.30E-114
1.70E-29
4.30E-18
WP_000213094.1 957195 957813 + 205PF13247
PF00037
PF12797
PF13187
PF12837
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_6
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
3.10E-29
8.80E-13
1.00E-12
3.90E-12
2.70E-11
WP_000534668.1 957814 958678 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)4.90E-122
WP_000165876.1 959340 958713 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_000109283.1 959653 960802 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.20E-27
1.20E-09
4.10E-07
7.20E-04
WP_000111043.1 961639 960898 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292822.1 964113 961830 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.70E-209
1.60E-43
WP_000642546.1 965025 964167 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_000194830.1 967191 965430 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.30E-83
7.20E-67
WP_000642840.1 967320 968013 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057158.1 968211 969300 + 362PF00266Aminotran_5Aminotransferase class-V1.70E-76
WP_000445244.1 969370 970654 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)8.60E-152
WP_001298297.1 970823 971588 + 254PF01435Peptidase_M48Peptidase family M483.60E-26
WP_000125016.1 971760 972444 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 972554 974228 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 974387 974672 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000705728.1 974877 977142 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.50E-51
1.10E-19
9.70E-06

Results for WP_032415649.1 back to top

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Couldn't process WP_032415649.1 Genbank filestream. May be corrupt.

Results for WP_023325131.1 back to top

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Couldn't process WP_023325131.1 Genbank filestream. May be corrupt.

Results for WP_036562414.1 [Candidatus Schmidhempelia bombi str. Bimp] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000067755.1 0 429 + 143INFERRED GENE---
WP_024495589.1 767 2057 + 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.80E-35
2.20E-32
WP_024495590.1 2311 3232 + 306PF00892EamAEamA-like transporter family7.00E-13
WP_024495591.1 4082 3332 - 249PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-27
7.70E-19
1.20E-07
WP_024495592.1 6787 4504 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
6.40E-207
9.50E-44
WP_024495593.1 7710 6861 - 282PF01226Form_Nir_transFormate/nitrite transporter4.10E-71
WP_036562414.1 9809 8057 - 583PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-78
3.30E-57
WP_024495595.1 10874 10223 - 216PF03458Gly_transporterGlycine transporter2.20E-44
WP_024495596.1 11581 10888 - 230PF01048PNP_UDP_1Phosphorylase superfamily2.30E-45
WP_024495597.1 11735 12518 + 260PF00106
PF13561
PF08659
PF13460
PF08643
adh_short
adh_short_C2
KR
NAD_binding_10
DUF1776
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
NAD(P)H-binding
Fungal family of unknown function (DUF1776)
5.50E-40
3.80E-30
6.50E-09
1.10E-05
9.80E-04
WP_024495598.1 12614 13484 + 289PF14561
PF14559
PF00085
PF12688
PF13098
TPR_20
TPR_19
Thioredoxin
TPR_5
Thioredoxin_2
Tetratricopeptide repeat
Tetratricopeptide repeat
Thioredoxin
Tetratrico peptide repeat
Thioredoxin-like domain
2.00E-26
4.90E-19
1.80E-17
1.20E-07
7.60E-05
WP_024495599.1 15302 13550 - 583PF13654
PF05362
AAA_32
Lon_C
LonB-like, AAA domain
Lon protease (S16) C-terminal proteolytic domain
3.30E-12
9.90E-10
WP_036562416.1 15550 17356 + 601PF11893
PF00884
PF01663
DUF3413
Sulfatase
Phosphodiest
Domain of unknown function (DUF3413)
Sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase
3.10E-86
8.40E-20
7.80E-04
WP_024495601.1 17687 17414 - 90PF03776MinESeptum formation topological specificity factor MinE8.40E-23
WP_024495602.1 18503 17690 - 270PF13614
PF10609
PF01656
PF09140
PF02374
AAA_31
ParA
CbiA
MipZ
ArsA_ATPase
AAA domain
NUBPL iron-transfer P-loop NTPase
CobQ/CobB/MinD/ParA nucleotide binding domain
ATPase MipZ
Anion-transporting ATPase
3.10E-22
3.00E-21
1.40E-20
4.10E-10
6.00E-10

Results for WP_005171039.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005171070.1 29117 32738 + 1206PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
7.30E-73
4.10E-44
3.90E-28
1.20E-26
3.30E-05
WP_005171053.1 33129 33741 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
3.00E-59
6.70E-05
WP_269846056.1 33757 35092 + 444PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
2.20E-63
1.70E-22
2.10E-15
8.50E-13
7.70E-07
WP_005162747.1 35263 36556 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.80E-35
4.90E-30
WP_005171044.1 36953 38102 + 382PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
6.60E-31
7.40E-07
1.00E-05
2.60E-04
WP_005171041.1 38920 38179 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.50E-31
1.70E-18
4.50E-06
WP_005166521.1 41281 38998 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-205
1.30E-43
NP_309014.1 41333 42191 + 286INFERRED GENE---
WP_005171039.1 44773 43006 - 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-81
7.20E-65
WP_005171031.1 44921 45959 + 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
3.20E-62
2.20E-26
WP_005171029.1 46104 46797 + 230PF04239DUF421Protein of unknown function (DUF421)8.60E-16
WP_005171026.1 47003 48089 + 361PF00266Aminotran_5Aminotransferase class-V8.70E-68
WP_005171024.1 48184 49471 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.00E-149
WP_005171002.1 49710 50403 + 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
3.40E-81
9.60E-07
1.60E-04
3.00E-04
WP_004391091.1 50571 52245 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_005159907.1 52308 52593 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.10E-28
8.20E-07
WP_005170997.1 52929 55215 + 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
6.70E-52
3.10E-20
2.10E-08

Results for WP_044521954.1 [Klebsiella quasipneumoniae subsp. quasipneumoniae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004201371.1 16556 17849 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.80E-36
2.00E-33
WP_271097257.1 18047 20486 + 812PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
4.50E-108
2.70E-28
5.20E-18
WP_048334592.1 20496 21114 + 205PF13247
PF12797
PF13187
PF00037
PF12838
Fer4_11
Fer4_2
Fer4_9
Fer4
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
7.70E-28
3.70E-13
2.00E-12
4.60E-12
2.80E-11
WP_023289013.1 21115 21979 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.90E-112
WP_008805851.1 22253 23402 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
1.10E-25
2.50E-09
1.90E-07
WP_271097258.1 24296 23555 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.90E-31
3.20E-18
9.10E-06
WP_023289014.1 26770 24487 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-207
1.60E-43
WP_023289015.1 27679 26821 - 285PF01226Form_Nir_transFormate/nitrite transporter2.30E-74
WP_044521954.1 29825 28064 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.70E-84
2.10E-67
WP_023289017.1 29940 30633 + 230PF04239DUF421Protein of unknown function (DUF421)1.90E-15
WP_023289018.1 30821 31910 + 362PF00266Aminotran_5Aminotransferase class-V3.50E-70
WP_032455267.1 31983 33267 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.00E-150
WP_049014842.1 33414 34182 + 255PF01435Peptidase_M48Peptidase family M482.60E-27
WP_271097261.1 34353 35037 + 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
2.90E-82
5.90E-08
WP_002898162.1 35170 36844 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.00E-98
5.10E-12
2.70E-06
WP_002898165.1 36995 37283 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.20E-08
9.40E-05
WP_271097263.1 37485 39750 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.50E-51
2.30E-17
6.90E-04

Results for WP_023286197.1 back to top

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Couldn't process WP_023286197.1 Genbank filestream. May be corrupt.

Results for WP_029497153.1 back to top

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Couldn't process WP_029497153.1 Genbank filestream. May be corrupt.

Results for WP_075541481.1 [Mycobacterium innocens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_075541480.1 1943 476 - 488PF07812TfuATfuA-like protein8.70E-43
WP_075541481.1 3196 1939 - 418PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-58

Results for WP_010443069.1 [Ruegeria conchae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010443078.1 145218 146517 + 432PF13440
PF14667
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
1.30E-12
2.10E-07
WP_010443077.1 148447 146563 - 627PF13522GATase_6Glutamine amidotransferase domain3.60E-07
WP_010443076.1 150410 148496 - 637PF00733
PF13537
PF13522
PF12481
Asn_synthase
GATase_7
GATase_6
DUF3700
Asparagine synthase
Glutamine amidotransferase domain
Glutamine amidotransferase domain
Aluminium induced protein
8.80E-57
7.50E-39
9.40E-35
4.10E-04
WP_010443075.1 151289 150413 - 291PF13489
PF08241
PF13847
PF08242
PF13649
Methyltransf_23
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.80E-18
3.70E-17
1.60E-14
3.70E-14
3.00E-13
WP_010443074.1 152208 151275 - 310PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
9.50E-26
2.20E-06
WP_010443073.1 154064 152285 - 592NO PFAM MATCH---
WP_238528835.1 155581 154249 - 443PF03721
PF00984
PF03720
PF03446
UDPG_MGDP_dh_N
UDPG_MGDP_dh
UDPG_MGDP_dh_C
NAD_binding_2
UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
NAD binding domain of 6-phosphogluconate dehydrogenase
1.90E-41
6.40E-30
1.00E-19
1.30E-07
WP_076611976.1 155782 156535 + 251INFERRED GENE---
WP_010443069.1 156806 158000 + 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-77
WP_010443068.1 157996 159313 + 438PF07812TfuATfuA-like protein4.20E-48
WP_010443067.1 159325 160636 + 436NO PFAM MATCH---
WP_010443066.1 160773 161703 + 309NO PFAM MATCH---
WP_010443065.1 162365 161867 - 165PF13508
PF13527
PF00583
PF13673
Acetyltransf_7
Acetyltransf_9
Acetyltransf_1
Acetyltransf_10
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
5.10E-09
6.90E-09
1.60E-08
8.20E-05
WP_010443064.1 162636 162372 - 87PF09857YjhX_toxinPutative toxin of bacterial toxin-antitoxin pair5.50E-25
WP_010443063.1 164498 162728 - 589PF00515
PF07719
PF13414
PF00211
PF14559
TPR_1
TPR_2
TPR_11
Guanylate_cyc
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Adenylate and Guanylate cyclase catalytic domain
Tetratricopeptide repeat
7.80E-18
1.60E-14
2.00E-14
3.50E-14
6.10E-12
WP_010443062.1 165212 164576 - 211PF13302
PF00583
PF13420
Acetyltransf_3
Acetyltransf_1
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
3.60E-18
1.40E-09
2.30E-06
WP_010443061.1 165683 165383 - 99PF07578LAB_NLipid A Biosynthesis N-terminal domain9.00E-34

Results for WP_075542765.1 [Mycobacterium innocens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_075542768.1 1826 230 - 531PF05872
PF01935
PF10412
PF13191
PF04851
HerA_C
DUF87
TrwB_AAD_bind
AAA_16
ResIII
Helicase HerA-like C-terminal
Helicase HerA, central domain
Type IV secretion-system coupling protein DNA-binding domain
AAA ATPase domain
Type III restriction enzyme, res subunit
3.40E-205
1.50E-07
1.40E-05
2.60E-05
1.70E-04
WP_063469805.1 1933 2581 + 215PF00929RNase_TExonuclease1.00E-31
WP_167470660.1 2855 3197 + 113PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-08
WP_075542765.1 3454 3781 + 108PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.80E-06
WP_075542764.1 4999 3802 - 398PF17964
PF03734
PF13205
Big_10
YkuD
Big_5
Bacterial Ig domain
L,D-transpeptidase catalytic domain
Bacterial Ig-like domain
8.80E-68
6.20E-16
9.00E-05
WP_063469801.1 5747 5519 - 75PF12277DUF3618Protein of unknown function (DUF3618)6.60E-17
WP_075542763.1 5838 6312 + 157PF00578
PF08534
PF05988
PF13911
AhpC-TSA
Redoxin
DUF899
AhpC-TSA_2
AhpC/TSA family
Redoxin
Bacterial protein of unknown function (DUF899)
AhpC/TSA antioxidant enzyme
4.60E-40
3.30E-30
1.80E-05
6.80E-04
NP_217038.1 6262 7677 + 471INFERRED GENE---
WP_075542762.1 7677 8823 + 381PF19354
PF02518
DUF5931
HATPase_c
Family of unknown function (DUF5931)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
3.00E-11
4.70E-07
WP_075542761.1 8815 9472 + 218PF00072
PF00196
PF08281
PF04545
PF13384
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
Homeodomain-like domain
1.50E-23
9.60E-22
4.00E-06
5.50E-05
6.30E-05
WP_075542772.1 9531 11313 + 593PF10101DUF2339Predicted membrane protein (DUF2339)9.00E-25
WP_023366014.1 11777 11384 - 130PF01648ACPS4'-phosphopantetheinyl transferase superfamily5.20E-19

Results for WP_051490166.1 [Mycobacterium pseudokansasii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_136627656.1 437 0 - 146PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
6.30E-13
6.60E-12
WP_099188049.1 2958 495 - 820PF00005
PF00498
PF16697
PF01061
PF13304
ABC_tran
FHA
Yop-YscD_cpl
ABC2_membrane
AAA_21
ABC transporter
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
ABC-2 type transporter
AAA domain, putative AbiEii toxin, Type IV TA system
6.10E-32
2.70E-21
4.90E-16
2.60E-15
5.80E-09
WP_036398228.1 5607 2985 - 873PF00005
PF00498
PF16697
PF01061
PF13304
ABC_tran
FHA
Yop-YscD_cpl
ABC2_membrane
AAA_21
ABC transporter
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
ABC-2 type transporter
AAA domain, putative AbiEii toxin, Type IV TA system
7.30E-33
2.10E-31
3.20E-23
1.80E-17
4.00E-09
WP_051490166.1 6195 7446 + 416PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-59
WP_063467722.1 7442 8891 + 482PF07812TfuATfuA-like protein1.30E-41

Results for WP_049992560.1 [Halapricum salinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049992553.1 2786707 2786977 + 89PF20068Amphi-TrpAmphi-Trp domain3.70E-31
WP_170178708.1 2787365 2787215 - 49NO PFAM MATCH---
WP_049992554.1 2787450 2788164 + 237NO PFAM MATCH---
WP_049992555.1 2789054 2788160 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
5.70E-38
WP_136342358.1 2789165 2789534 + 122NO PFAM MATCH---
WP_049992557.1 2790803 2789534 - 422PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
3.30E-152
5.00E-10
5.00E-04
WP_136342359.1 2791122 2792997 + 624NO PFAM MATCH---
WP_049992559.1 2793206 2794025 + 272PF19138DUF5821Family of unknown function (DUF5821)1.30E-100
WP_049992560.1 2794158 2795859 + 566PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.00E-51
WP_049992561.1 2797015 2795869 - 381PF01889DUF63Membrane protein of unknown function DUF632.10E-35
WP_049992562.1 2797120 2798344 + 407PF03453
PF00994
PF03454
MoeA_N
MoCF_biosynth
MoeA_C
MoeA N-terminal region (domain I and II)
Probable molybdopterin binding domain
MoeA C-terminal region (domain IV)
4.50E-40
4.40E-26
2.30E-18
WP_049992563.1 2798336 2800250 + 637PF03453
PF12727
PF00994
PF03454
MoeA_N
PBP_like
MoCF_biosynth
MoeA_C
MoeA N-terminal region (domain I and II)
PBP superfamily domain
Probable molybdopterin binding domain
MoeA C-terminal region (domain IV)
8.40E-39
3.00E-27
2.40E-26
1.10E-09
WP_049992564.1 2800928 2800250 - 225PF13419
PF00702
PF12710
HAD_2
Hydrolase
HAD
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
3.00E-19
1.60E-12
5.00E-08
WP_049992565.1 2801975 2801012 - 320PF15902
PF14870
PF13570
Sortilin-Vps10
PSII_BNR
PQQ_3
Sortilin, neurotensin receptor 3,
Photosynthesis system II assembly factor YCF48
PQQ-like domain
1.80E-05
1.50E-04
8.00E-04
WP_049992566.1 2803850 2802038 - 603PF13231
PF03901
PMT_2
Glyco_transf_22
Dolichyl-phosphate-mannose-protein mannosyltransferase
Alg9-like mannosyltransferase family
6.50E-11
2.90E-04
WP_049992567.1 2805359 2803910 - 482PF01139RtcBtRNA-splicing ligase RtcB1.20E-57
WP_161569359.1 2805548 2807276 + 575PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle2.20E-44

Results for WP_015763174.1 [Halomicrobium sp. ZPS1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015763166.1 2768134 2767987 - 48PF09079Cdc6_CCDC6, C terminal winged helix domain1.70E-04
WP_015763167.1 2768192 2768906 + 237NO PFAM MATCH---
WP_015763168.1 2769389 2768906 - 160PF00293NUDIXNUDIX domain2.10E-05
WP_015763169.1 2770284 2769390 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
6.50E-68
8.40E-35
WP_015763170.1 2770922 2770364 - 185NO PFAM MATCH---
WP_015763171.1 2772485 2771210 - 424PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.20E-151
8.40E-11
5.50E-05
WP_015763172.1 2772625 2774686 + 686NO PFAM MATCH---
WP_015763173.1 2774880 2775699 + 272PF19138DUF5821Family of unknown function (DUF5821)8.20E-95
WP_015763174.1 2775732 2777466 + 577PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.10E-48
WP_015763175.1 2777572 2778889 + 438NO PFAM MATCH---
WP_015763176.1 2780052 2778885 - 388PF01889DUF63Membrane protein of unknown function DUF631.50E-34
WP_015763177.1 2780978 2780135 - 280PF00459Inositol_PInositol monophosphatase family1.10E-45
WP_015763178.1 2781234 2781036 - 65NO PFAM MATCH---
WP_015763179.1 2781691 2781982 + 96PF13821DUF4187Domain of unknown function (DUF4187)6.90E-04
WP_015763180.1 2782032 2782527 + 164PF03745DUF309Domain of unknown function (DUF309)5.30E-16
WP_015763181.1 2782575 2783370 + 264PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.80E-18
WP_015763182.1 2783986 2783524 - 153PF03684UPF0179Uncharacterised protein family (UPF0179)3.10E-46

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_044449639.1 [Mastigocladus laminosus UU774] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_044449652.1 16799 17324 + 174NO PFAM MATCH---
WP_044449731.1 17494 18007 + 170NO PFAM MATCH---
WP_044449650.1 19786 20023 + 78NO PFAM MATCH---
WP_044449648.1 20029 21166 + 378PF01636
PF01633
APH
Choline_kinase
Phosphotransferase enzyme family
Choline/ethanolamine kinase
3.90E-13
6.70E-04
WP_044449646.1 21162 22179 + 338PF17914HopA1HopA1 effector protein family1.80E-33
WP_044449644.1 22175 23084 + 302PF01636APHPhosphotransferase enzyme family4.70E-06
WP_052508307.1 23080 23713 + 210PF02441FlavoproteinFlavoprotein3.70E-32
WP_167737897.1 23945 24914 + 322PF06325
PF13649
PF02475
PF08241
PF13489
PrmA
Methyltransf_25
Met_10
Methyltransf_11
Methyltransf_23
Ribosomal protein L11 methyltransferase (PrmA)
Methyltransferase domain
Met-10+ like-protein
Methyltransferase domain
Methyltransferase domain
6.30E-13
1.20E-07
1.20E-04
6.40E-04
6.80E-04
WP_044449639.1 24926 26282 + 451PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-74
WP_044449638.1 26278 26950 + 223PF07812TfuATfuA-like protein2.70E-41
WP_044449636.1 26933 27785 + 283PF05721PhyHPhytanoyl-CoA dioxygenase (PhyH)2.00E-22
WP_135107297.1 27781 28504 + 240PF08241
PF13649
PF08242
PF13489
PF13847
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.80E-12
5.50E-12
6.30E-12
1.00E-11
7.20E-10
WP_015213505.1 28570 28666 + 32INFERRED GENE---
WP_135105769.1 29186 29687 + 166PF13565
PF13592
PF13384
PF13551
PF13518
HTH_32
HTH_33
HTH_23
HTH_29
HTH_28
Homeodomain-like domain
Winged helix-turn helix
Homeodomain-like domain
Winged helix-turn helix
Helix-turn-helix domain
2.50E-10
5.60E-08
8.20E-08
8.80E-08
1.80E-07
WP_135105767.1 29680 30247 + 188PF13358
PF03184
DDE_3
DDE_1
DDE superfamily endonuclease
DDE superfamily endonuclease
3.20E-21
2.30E-04
WP_015183761.1 30254 30653 + 133INFERRED GENE---
WP_015196134.1 30809 32172 + 454INFERRED GENE---

Results for WP_000192994.1 back to top

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Couldn't process WP_000192994.1 Genbank filestream. May be corrupt.

Results for WP_001220022.1 [Streptococcus pneumoniae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_271207700.1 0 801 + 266NO PFAM MATCH---
WP_000386786.1 829 1738 + 302NO PFAM MATCH---
WP_001220022.1 1739 3638 + 632PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-62
WP_271207701.1 3661 4162 + 167PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-27

Results for WP_031179496.1 [Streptomyces seoulensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_234312610.1 6222839 6221510 - 442PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
1.10E-18
2.20E-09
WP_031179489.1 6223025 6223199 + 57NO PFAM MATCH---
WP_031179490.1 6225246 6223311 - 644PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-80
WP_031179491.1 6225995 6225242 - 250PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.50E-25
3.90E-20
WP_037774389.1 6226948 6225991 - 318PF00005
PF13304
PF02463
PF13175
PF13558
ABC_tran
AAA_21
SMC_N
AAA_15
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
SbcC/RAD50-like, Walker B motif
1.50E-28
3.40E-18
2.80E-07
1.60E-05
2.20E-04
WP_051887468.1 6229362 6228243 - 372PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.80E-92
WP_051887469.1 6232091 6229358 - 910PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.70E-42
WP_031179495.1 6233742 6232155 - 528PF00881NitroreductaseNitroreductase family1.20E-11
WP_031179496.1 6235751 6233834 - 638PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-78
WP_031179497.1 6237969 6235740 - 742PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-17
WP_107059504.1 6239091 6238002 - 362PF03704
PF00486
PF13428
BTAD
Trans_reg_C
TPR_14
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
1.40E-36
1.70E-09
6.60E-04
WP_031179499.1 6239360 6239558 + 65NO PFAM MATCH---
WP_031179500.1 6240557 6239579 - 325PF19459DUF5996Family of unknown function (DUF5996)2.40E-73
WP_031179501.1 6240855 6241962 + 368PF00296Bac_luciferaseLuciferase-like monooxygenase4.30E-61
WP_037774330.1 6241958 6242564 + 201PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
7.20E-35
1.70E-06
WP_051887471.1 6242740 6244600 + 619PF09206
PF00652
PF14200
ArabFuran-catal
Ricin_B_lectin
RicinB_lectin_2
Alpha-L-arabinofuranosidase B, catalytic
Ricin-type beta-trefoil lectin domain
Ricin-type beta-trefoil lectin domain-like
1.00E-134
1.30E-46
1.90E-40
WP_031179504.1 6244745 6245540 + 264PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
6.40E-44
5.90E-39
2.20E-08

Results for WP_031179497.1 [Streptomyces seoulensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_031179489.1 6223025 6223199 + 57NO PFAM MATCH---
WP_031179490.1 6225246 6223311 - 644PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-80
WP_031179491.1 6225995 6225242 - 250PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.50E-25
3.90E-20
WP_037774389.1 6226948 6225991 - 318PF00005
PF13304
PF02463
PF13175
PF13558
ABC_tran
AAA_21
SMC_N
AAA_15
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
SbcC/RAD50-like, Walker B motif
1.50E-28
3.40E-18
2.80E-07
1.60E-05
2.20E-04
WP_051887468.1 6229362 6228243 - 372PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.80E-92
WP_051887469.1 6232091 6229358 - 910PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.70E-42
WP_031179495.1 6233742 6232155 - 528PF00881NitroreductaseNitroreductase family1.20E-11
WP_031179496.1 6235751 6233834 - 638PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-78
WP_031179497.1 6237969 6235740 - 742PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-17
WP_107059504.1 6239091 6238002 - 362PF03704
PF00486
PF13428
BTAD
Trans_reg_C
TPR_14
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
1.40E-36
1.70E-09
6.60E-04
WP_031179499.1 6239360 6239558 + 65NO PFAM MATCH---
WP_031179500.1 6240557 6239579 - 325PF19459DUF5996Family of unknown function (DUF5996)2.40E-73
WP_031179501.1 6240855 6241962 + 368PF00296Bac_luciferaseLuciferase-like monooxygenase4.30E-61
WP_037774330.1 6241958 6242564 + 201PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
7.20E-35
1.70E-06
WP_051887471.1 6242740 6244600 + 619PF09206
PF00652
PF14200
ArabFuran-catal
Ricin_B_lectin
RicinB_lectin_2
Alpha-L-arabinofuranosidase B, catalytic
Ricin-type beta-trefoil lectin domain
Ricin-type beta-trefoil lectin domain-like
1.00E-134
1.30E-46
1.90E-40
WP_031179504.1 6244745 6245540 + 264PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
6.40E-44
5.90E-39
2.20E-08
WP_031179505.1 6246070 6245536 - 177PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
9.50E-22
5.90E-10

Results for WP_024260246.1 [Shigella flexneri 5a str. M90T] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000167336.1 987680 987395 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 989513 987839 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 990307 989623 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_024260247.1 991244 990479 - 254PF01435Peptidase_M48Peptidase family M483.80E-26
NP_706843.1 991379 992727 + 449INFERRED GENE---
WP_000445222.1 994136 992852 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.70E-150
WP_000057149.1 995295 994206 - 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
NP_415426.1 995493 996120 + 209INFERRED GENE---
WP_024260246.1 996249 998010 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-82
6.20E-67
WP_000642544.1 998415 999273 + 285PF01226Form_Nir_transFormate/nitrite transporter2.20E-74
WP_001292813.1 999327 1001610 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.50E-209
1.60E-43
WP_000111043.1 1001801 1002542 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
NP_415421.1 1002623 1002884 + 87INFERRED GENE---
WP_094081550.1 1004081 1002924 - 385PF01527
PF00665
PF13683
PF13333
PF13276
HTH_Tnp_1
rve
rve_3
rve_2
HTH_21
Transposase
Integrase core domain
Integrase core domain
Integrase core domain
HTH-like domain
1.50E-20
1.00E-18
2.40E-15
7.30E-12
2.10E-10
NP_415419.2 1004138 1004534 + 132INFERRED GENE---
NP_415420.1 1004534 1005308 + 258INFERRED GENE---
WP_223368647.1 1006022 1005324 - 232PF03400
PF12759
PF03811
DDE_Tnp_IS1
HTH_Tnp_IS1
Zn_Tnp_IS1
IS1 transposase
InsA C-terminal domain
InsA N-terminal domain
1.50E-73
1.10E-26
8.00E-20
NP_415420.1 1006075 1006219 + 48INFERRED GENE---

Results for WP_046491033.1 [Pseudomonas veronii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046491020.1 4824966 4826370 + 467PF07690MFS_1Major Facilitator Superfamily2.70E-48
WP_155678329.1 4827324 4826403 - 306PF00583
PF13508
PF13673
PF01047
PF12802
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
MarR
MarR_2
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
MarR family
MarR family
5.10E-17
6.10E-14
2.20E-13
1.10E-10
1.10E-09
WP_046491024.1 4828419 4827414 - 334PF00892EamAEamA-like transporter family4.30E-11
WP_017846425.1 4828510 4829419 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.30E-27
3.70E-18
WP_155678330.1 4833596 4829537 - 1352PF00384
PF01568
PF00258
PF00667
PF04879
Molybdopterin
Molydop_binding
Flavodoxin_1
FAD_binding_1
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Flavodoxin
FAD binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.40E-69
1.20E-32
5.40E-29
8.00E-28
6.20E-18
WP_155678331.1 4834111 4836679 + 855PF07992
PF01077
PF00070
PF03460
PF18267
Pyr_redox_2
NIR_SIR
Pyr_redox
NIR_SIR_ferr
Rubredoxin_C
Pyridine nucleotide-disulphide oxidoreductase
Nitrite and sulphite reductase 4Fe-4S domain
Pyridine nucleotide-disulphide oxidoreductase
Nitrite/Sulfite reductase ferredoxin-like half domain
Rubredoxin NAD+ reductase C-terminal domain
1.70E-45
4.90E-19
3.70E-13
3.30E-11
4.30E-11
WP_017846422.1 4836678 4837041 + 120PF13806Rieske_2Rieske-like [2Fe-2S] domain5.80E-35
WP_155678332.1 4838684 4837115 - 522PF00015
PF13426
PF08447
PF00989
MCPsignal
PAS_9
PAS_3
PAS
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS domain
PAS fold
PAS fold
5.30E-47
3.10E-10
8.20E-10
4.90E-09
WP_046491033.1 4838897 4841096 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.30E-74
4.80E-73
2.10E-08
WP_046486027.1 4842744 4841577 - 388PF01053
PF00266
PF00155
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class-V
Aminotransferase class I and II
1.40E-149
4.20E-04
9.90E-04
WP_155678333.1 4844120 4842740 - 459PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
5.20E-62
1.70E-15
WP_046486031.1 4844375 4846172 + 598PF01425AmidaseAmidase1.00E-88
WP_046486033.1 4846174 4846909 + 244PF07729
PF00392
PF01325
PF13412
FCD
GntR
Fe_dep_repress
HTH_24
FCD domain
Bacterial regulatory proteins, gntR family
Iron dependent repressor, N-terminal DNA binding domain
Winged helix-turn-helix DNA-binding
2.80E-20
2.60E-17
3.50E-06
3.70E-04
WP_155678334.1 4847735 4846883 - 283PF00701DHDPSDihydrodipicolinate synthetase family6.30E-52
WP_017846413.1 4848580 4848097 - 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.80E-45
WP_155678335.1 4849722 4848792 - 309PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.10E-36
4.00E-18
WP_155678336.1 4849865 4850270 + 134PF01042Ribonuc_L-PSPEndoribonuclease L-PSP1.10E-25

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_071680745.1 [Serratia sp. JSRIV002] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021804934.1 2176179 2176788 + 202PF02613Nitrate_red_delNitrate reductase delta subunit2.00E-24
WP_059200388.1 2176787 2177354 + 188PF00037
PF12838
PF13187
PF12837
PF13484
Fer4
Fer4_7
Fer4_9
Fer4_6
Fer4_16
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S double cluster binding domain
1.40E-12
2.90E-12
6.40E-11
5.00E-10
7.60E-08
WP_179247828.1 2177475 2178621 + 381PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
1.70E-30
1.00E-10
1.70E-06
3.70E-06
WP_179247829.1 2180154 2178654 - 499PF00916
PF16983
Sulfate_transp
MFS_MOT1
Sulfate permease family
Molybdate transporter of MFS superfamily
2.20E-58
2.00E-05
WP_223665363.1 2180771 2180150 - 206PF00484Pro_CACarbonic anhydrase3.10E-45
WP_024484611.1 2181952 2181211 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4.40E-29
2.90E-18
4.90E-06
WP_021804926.1 2184544 2182261 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.00E-206
2.00E-43
WP_024484609.1 2185465 2184604 - 286PF01226Form_Nir_transFormate/nitrite transporter2.10E-74
WP_071680745.1 2187678 2185914 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.90E-83
7.00E-68
WP_037375004.1 2187826 2188873 + 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
3.10E-64
3.40E-26
WP_059200392.1 2188958 2189651 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-13
WP_021804922.1 2189899 2190985 + 361PF00266Aminotran_5Aminotransferase class-V1.40E-64
WP_021804921.1 2191101 2192388 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.00E-150
WP_021804920.1 2192580 2193270 + 229PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
8.10E-83
3.00E-08
1.30E-05
9.90E-05
7.90E-04
WP_021804919.1 2193461 2195138 + 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.50E-98
7.70E-12
7.30E-07
WP_004928264.1 2195200 2195485 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.60E-28
4.00E-07
6.30E-04
WP_245399449.1 2195774 2198006 + 743PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
7.10E-55
1.10E-17
1.40E-10
5.20E-04

Results for WP_014845221.1 [Arachnia propionica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_234028360.1 3397346 3398534 + 395PF02655ATP-grasp_3ATP-grasp domain4.20E-04
WP_197720310.1 3398707 3398596 - 36NO PFAM MATCH---
WP_014845228.1 3399112 3398842 - 89PF01402RHH_1Ribbon-helix-helix protein, copG family5.20E-09
WP_014845226.1 3399877 3399523 - 117PF12840
PF01022
HTH_20
HTH_5
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
1.70E-10
1.90E-06
WP_051014886.1 3400105 3401296 + 396PF07690
PF06779
PF05977
PF00083
MFS_1
MFS_4
MFS_3
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Transmembrane secretion effector
Sugar (and other) transporter
2.10E-41
2.50E-11
1.40E-07
7.50E-07
WP_014845224.1 3402030 3401250 - 259PF01497Peripla_BP_2Periplasmic binding protein3.00E-04
WP_041696019.1 3402095 3402815 + 239NO PFAM MATCH---
WP_014845222.1 3403162 3403417 + 84NO PFAM MATCH---
WP_014845221.1 3403442 3404681 + 412PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-44
WP_014845220.1 3404685 3405408 + 240PF00881NitroreductaseNitroreductase family3.40E-16
WP_234028411.1 3406359 3405585 - 257PF08282
PF05116
Hydrolase_3
S6PP
haloacid dehalogenase-like hydrolase
Sucrose-6F-phosphate phosphohydrolase
1.90E-44
2.30E-12
WP_041696016.1 3406430 3407204 + 257PF00455
PF08220
DeoRC
HTH_DeoR
DeoR C terminal sensor domain
DeoR-like helix-turn-helix domain
9.00E-38
1.60E-10
WP_123823979.1 3407335 3408619 + 427PF02720
PF01844
DUF222
HNH
Domain of unknown function (DUF222)
HNH endonuclease
2.40E-12
1.00E-04
WP_014845217.1 3408684 3409158 + 157NO PFAM MATCH---
WP_014845216.1 3410136 3409557 - 192PF01106NifUNifU-like domain4.90E-16
WP_198341735.1 3412013 3410132 - 626PF02421
PF07670
PF07664
PF01926
FeoB_N
Gate
FeoB_C
MMR_HSR1
Ferrous iron transport protein B
Nucleoside recognition
Ferrous iron transport protein B C terminus
50S ribosome-binding GTPase
2.80E-40
5.10E-33
7.90E-18
7.20E-12
WP_041696013.1 3412315 3412069 - 81PF04023FeoAFeoA domain1.30E-16

Results for WP_000923699.1 [Bacillus pacificus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001200502.1 166109 167306 + 398PF07662
PF01773
Nucleos_tra2_C
Nucleos_tra2_N
Na+ dependent nucleoside transporter C-terminus
Na+ dependent nucleoside transporter N-terminus
3.30E-56
7.60E-18
WP_001233742.1 167479 168562 + 360PF01522
PF08481
Polysacc_deac_1
GBS_Bsp-like
Polysaccharide deacetylase
GBS Bsp-like repeat
3.70E-17
8.00E-05
WP_000007360.1 168678 169908 + 409PF02073Peptidase_M29Thermophilic metalloprotease (M29)2.00E-175
WP_000915099.1 169949 170134 + 61INFERRED GENE---
WP_003209857.1 170262 170886 + 208INFERRED GENE---
WP_000794852.1 172241 170975 - 421PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
4.30E-26
3.00E-22
WP_044790841.1 173567 172277 - 429PF19985DUF6421Family of unknown function (DUF6421)2.00E-05
WP_014481552.1 174559 173578 - 326NO PFAM MATCH---
WP_000923699.1 175937 174572 - 454PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-21
WP_000098406.1 176702 175937 - 254PF00881NitroreductaseNitroreductase family6.50E-17
WP_000243160.1 177777 176682 - 364PF00881NitroreductaseNitroreductase family7.50E-06
WP_000695082.1 178876 177790 - 361PF00881NitroreductaseNitroreductase family1.10E-07
WP_014481551.1 180252 178872 - 459PF13483
PF12706
PF00753
Lactamase_B_3
Lactamase_B_2
Lactamase_B
Beta-lactamase superfamily domain
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
2.40E-14
1.30E-12
3.10E-04
WP_014481550.1 180482 180344 - 45NO PFAM MATCH---

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_057975777.1 [Pseudomonas sp. MF2857] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_054921370.1 87558 88467 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-26
5.60E-20
WP_014718638.1 89790 88497 - 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.30E-11
2.50E-05
WP_054921373.1 90212 89786 - 141PF09990DUF2231Predicted membrane protein (DUF2231)3.80E-09
WP_057975773.1 90624 90300 - 107NO PFAM MATCH---
WP_034127588.1 90847 91327 + 159PF13671
PF13238
PF01712
AAA_33
AAA_18
dNK
AAA domain
AAA domain
Deoxynucleoside kinase
9.80E-28
5.40E-06
1.00E-04
WP_020302289.1 91323 92121 + 266INFERRED GENE---
WP_057975775.1 92113 92563 + 149PF00293NUDIXNUDIX domain4.00E-15
WP_057975776.1 93251 92672 - 192PF00857IsochorismataseIsochorismatase family1.50E-36
WP_057975777.1 93415 95614 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
9.10E-75
6.60E-71
5.10E-08
WP_019817159.1 96904 95737 - 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme1.70E-149
WP_057975778.1 98277 96900 - 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
7.50E-64
2.50E-15
WP_057975779.1 99446 98963 - 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.90E-46
WP_054897361.1 100690 99505 - 394PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
2.90E-33
1.40E-10
5.40E-09
WP_057975780.1 100784 101678 + 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.50E-38
4.30E-16
WP_057975781.1 101947 103546 + 532PF07693KAP_NTPaseKAP family P-loop domain4.00E-05
WP_232458751.1 104420 103724 - 231NO PFAM MATCH---
WP_003180299.1 104564 104846 + 94INFERRED GENE---

Results for WP_004730992.1 [Acinetobacter lwoffii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004730980.1 3136271 3133691 - 859PF00563
PF00990
PF13426
PF00989
PF08448
EAL
GGDEF
PAS_9
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
7.70E-74
1.80E-39
2.30E-31
3.50E-24
8.20E-18
WP_004730982.1 3137137 3136477 - 219PF01144CoA_transCoenzyme A transferase2.70E-31
WP_004730985.1 3137808 3137136 - 223PF01144CoA_transCoenzyme A transferase8.80E-65
WP_004646972.1 3139129 3137848 - 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_004646973.1 3140583 3139383 - 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.60E-35
1.10E-27
1.40E-19
3.50E-04
WP_004730987.1 3141769 3140614 - 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
9.70E-32
6.30E-28
1.20E-25
WP_004280319.1 3142271 3143108 + 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
1.30E-11
1.40E-04
WP_222112174.1 3143335 3145048 + 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.00E-50
2.80E-07
9.00E-07
2.60E-06
5.00E-06
WP_004730992.1 3147542 3145340 - 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-75
3.40E-73
8.80E-09
WP_085064590.1 3148654 3147883 - 256NO PFAM MATCH---
WP_004730996.1 3150437 3148781 - 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.20E-95
1.30E-41
7.70E-04
WP_085064589.1 3151924 3150448 - 491PF00171AldedhAldehyde dehydrogenase family9.50E-175
WP_004731001.1 3152524 3151945 - 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_004731003.1 3152794 3154831 + 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.20E-175
WP_004280329.1 3154859 3155468 + 202PF01914MarCMarC family integral membrane protein9.30E-14
WP_004731005.1 3157697 3155531 - 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
9.70E-28
2.30E-11
WP_004731007.1 3159115 3158197 - 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.00E-14

Results for WP_018269664.1 back to top

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Couldn't process WP_018269664.1 Genbank filestream. May be corrupt.

Results for WP_026111117.1 [Pseudoalteromonas sp. CNC9-20] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022944995.1 48839 49127 + 95NO PFAM MATCH---
WP_239409285.1 49123 50731 + 535PF03929PepSY_TMPepSY-associated TM region1.90E-47
WP_239409286.1 50727 50964 + 78NO PFAM MATCH---
WP_239409287.1 51704 50969 - 244PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
1.90E-56
2.60E-48
1.10E-12
7.60E-05
WP_022944991.1 52671 51744 - 308PF01145Band_7SPFH domain / Band 7 family1.40E-30
WP_239409288.1 53624 52751 - 290PF00753Lactamase_BMetallo-beta-lactamase superfamily1.50E-10
WP_022944989.1 53851 54946 + 364PF00990GGDEFDiguanylate cyclase, GGDEF domain9.00E-43
WP_239409289.1 57201 54942 - 752PF01804Penicil_amidasePenicillin amidase7.90E-126
WP_026111117.1 57354 59115 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.70E-76
1.30E-58
WP_239409290.1 59257 63661 + 1467PF08447
PF02518
PF00072
PF00512
PF03924
PAS_3
HATPase_c
Response_reg
HisKA
CHASE
PAS fold
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
2.00E-31
2.80E-31
4.10E-25
3.20E-18
2.60E-17
WP_151173619.1 63756 64587 + 276PF02540NAD_synthaseNAD synthase8.30E-67
WP_239409291.1 64738 65446 + 235PF13561
PF00106
PF08659
PF01370
PF05368
adh_short_C2
adh_short
KR
Epimerase
NmrA
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NmrA-like family
1.20E-31
4.00E-27
2.70E-09
4.20E-07
3.00E-05
WP_239409292.1 65457 66012 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I1.30E-77
WP_022944982.1 66020 66377 + 118PF02152FolBDihydroneopterin aldolase1.30E-29
WP_026111116.1 66863 66404 - 152PF09335SNARE_assocSNARE associated Golgi protein3.80E-11
WP_045979475.1 67216 66901 - 104PF09685DUF4870Domain of unknown function (DUF4870)8.40E-38
WP_022944979.1 67484 67955 + 156PF11026DUF2721Protein of unknown function (DUF2721)4.60E-30

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Results for WP_043492332.1 [Hafnia alvei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043492321.1 3301 4162 + 286PF04976DmsCDMSO reductase anchor subunit (DmsC)3.60E-106
WP_043492322.1 4275 4890 + 204PF02613Nitrate_red_delNitrate reductase delta subunit1.40E-25
WP_043492324.1 4889 5477 + 195PF12837
PF00037
PF13187
PF12838
PF13237
Fer4_6
Fer4
Fer4_9
Fer4_7
Fer4_10
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
6.80E-15
3.40E-14
1.00E-12
2.00E-12
2.40E-09
WP_043492326.1 5593 6733 + 379PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
6.30E-26
8.30E-08
4.60E-05
7.40E-04
WP_043492328.1 7264 6808 - 151PF00359PTS_EIIA_2Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 21.00E-04
WP_025800959.1 8557 7816 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4.00E-30
6.40E-18
1.60E-05
WP_025800960.1 11137 8854 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
6.60E-207
1.50E-43
WP_025800961.1 12056 11198 - 285PF01226Form_Nir_transFormate/nitrite transporter5.20E-74
WP_043492332.1 14335 12574 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.10E-83
2.40E-68
WP_025800963.1 14478 15525 + 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.50E-63
3.10E-26
WP_043492334.1 15617 16310 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_043492336.1 16584 17673 + 362PF00266Aminotran_5Aminotransferase class-V2.40E-69
WP_043492338.1 17825 19106 + 426PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.20E-148
WP_025800967.1 19454 20144 + 229PF02224
PF13189
PF13238
PF13671
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_33
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.50E-82
1.10E-06
1.40E-06
2.50E-04
3.00E-04
WP_025800968.1 20365 22042 + 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.10E-98
7.10E-11
8.70E-07
WP_004095742.1 22127 22412 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.20E-28
2.20E-07
WP_264097701.1 22662 24930 + 755PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.40E-44
1.10E-14
2.90E-11

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Results for WP_017961647.1 [Rhizobium leguminosarum bv. viciae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_131644879.1 32521 33703 + 393PF00535
PF13641
PF13506
PF13632
Glycos_transf_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_trans_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family 21
Glycosyl transferase family group 2
7.00E-24
1.00E-19
2.50E-06
2.00E-05
WP_131644880.1 33696 36699 + 1000PF00535
PF05401
PF01522
PF13641
PF13649
Glycos_transf_2
NodS
Polysacc_deac_1
Glyco_tranf_2_3
Methyltransf_25
Glycosyl transferase family 2
Nodulation protein S (NodS)
Polysaccharide deacetylase
Glycosyltransferase like family 2
Methyltransferase domain
6.70E-27
1.50E-24
8.60E-19
6.80E-14
1.30E-12
WP_131644881.1 36706 37783 + 358PF00535
PF10111
PF13641
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
1.80E-33
8.70E-19
1.60E-16
WP_131644882.1 37775 39530 + 584PF00005
PF00664
PF02463
PF13555
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA ATPase domain
7.90E-30
1.10E-11
3.50E-06
1.10E-04
1.40E-04
WP_017961645.1 39526 40651 + 374PF00535
PF10111
PF13641
PF13704
PF13506
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 2
Glycosyl transferase family 21
8.80E-37
1.90E-24
1.90E-23
1.80E-06
2.70E-05
WP_003542083.1 41968 42175 + 68NO PFAM MATCH---
WP_003542090.1 42840 42591 - 82NO PFAM MATCH---
WP_017961646.1 43651 42943 - 235PF07812TfuATfuA-like protein1.20E-42
WP_017961647.1 44841 43647 - 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-62
WP_017961648.1 45096 44883 - 70NO PFAM MATCH---
WP_017961649.1 46964 45116 - 615PF14559TPR_19Tetratricopeptide repeat2.10E-04
WP_017961650.1 47399 46973 - 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
3.60E-12
5.90E-08
2.00E-07
1.60E-04
WP_018446803.1 47570 47770 + 66INFERRED GENE---
WP_131644883.1 47894 48785 + 296PF19495DUF6030Family of unknown function (DUF6030)3.60E-61
WP_043294569.1 49190 48815 - 124NO PFAM MATCH---
WP_131629762.1 49395 50469 + 357PF00331Glyco_hydro_10Glycosyl hydrolase family 101.30E-67
WP_003542111.1 50500 51652 + 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
8.80E-29
1.00E-24
1.80E-12
9.90E-09
3.70E-06

Results for WP_017957752.1 [Rhizobium leguminosarum bv. viciae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017957760.1 164784 165600 + 271PF02548Pantoate_transfKetopantoate hydroxymethyltransferase2.90E-42
WP_246706596.1 165803 166628 + 274PF19368AraR_CAraR C-terminal winged HTH domain1.80E-07
WP_017957758.1 166697 167669 + 323PF02445NadAQuinolinate synthetase A protein2.60E-112
WP_017957757.1 167665 169207 + 513PF00890
PF01266
PF02910
PF07992
FAD_binding_2
DAO
Succ_DH_flav_C
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
Fumarate reductase flavoprotein C-term
Pyridine nucleotide-disulphide oxidoreductase
1.00E-79
1.10E-07
7.60E-05
2.40E-04
WP_017957756.1 169184 170108 + 307PF01729
PF02749
QRPTase_C
QRPTase_N
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
6.60E-60
5.30E-28
HZ318_RS34935 170254 170464 + 70INFERRED GENE---
WP_210271621.1 170755 172687 + 643PF03704
PF14559
PF07719
PF13424
PF00515
BTAD
TPR_19
TPR_2
TPR_12
TPR_1
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
8.70E-13
3.80E-11
1.00E-08
1.70E-08
9.10E-08
WP_003548235.1 172792 172936 + 47NO PFAM MATCH---
WP_017957752.1 172949 174212 + 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-67
WP_017957751.1 174208 174952 + 247PF07812TfuATfuA-like protein1.60E-38
WP_003548229.1 175017 175284 + 88NO PFAM MATCH---
WP_012763606.1 175749 175344 - 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.70E-07
3.20E-06
WP_205920612.1 176770 175951 - 272PF04909Amidohydro_2Amidohydrolase7.30E-38
WP_017957749.1 177645 176859 - 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
2.70E-13
2.50E-11
4.10E-08
1.80E-06
5.50E-05
WP_017957748.1 178083 178833 + 249PF13561
PF00106
PF00107
PF01370
PF08659
adh_short_C2
adh_short
ADH_zinc_N
Epimerase
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
Zinc-binding dehydrogenase
NAD dependent epimerase/dehydratase family
KR domain
1.10E-55
6.00E-43
1.20E-05
1.30E-05
2.80E-04
WP_017957747.1 178928 180206 + 425PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
1.30E-59
2.50E-04
3.80E-04
WP_017957746.1 180429 183009 + 859PF00656
PF08238
Peptidase_C14
Sel1
Caspase domain
Sel1 repeat
2.20E-31
3.00E-25

Results for WP_004973821.1 [Acinetobacter towneri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_096902340.1 9366 8910 - 151PF01220DHquinase_IIDehydroquinase class II2.50E-60
WP_104851943.1 11740 10333 - 468PF00512
PF02518
PF08521
HisKA
HATPase_c
2CSK_N
His Kinase A (phospho-acceptor) domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Two-component sensor kinase N-terminal
5.00E-10
2.20E-09
3.50E-09
WP_104851944.1 12405 11736 - 222PF00072
PF00486
PF06490
Response_reg
Trans_reg_C
FleQ
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
Flagellar regulatory protein FleQ
1.70E-24
2.00E-22
2.50E-05
WP_253116781.1 12575 14639 + 687PF11412
PF02683
PF13899
PF00085
PF13098
DsbC
DsbD
Thioredoxin_7
Thioredoxin
Thioredoxin_2
Disulphide bond corrector protein DsbC
Cytochrome C biogenesis protein transmembrane region
Thioredoxin-like
Thioredoxin
Thioredoxin-like domain
3.60E-25
9.10E-16
6.20E-09
1.80E-08
1.00E-06
WP_104851946.1 14635 15466 + 276PF00578
PF08534
PF00085
PF13098
PF13905
AhpC-TSA
Redoxin
Thioredoxin
Thioredoxin_2
Thioredoxin_8
AhpC/TSA family
Redoxin
Thioredoxin
Thioredoxin-like domain
Thioredoxin-like
8.90E-14
4.60E-12
6.70E-08
2.10E-07
2.20E-07
WP_004973828.1 15526 16285 + 252PF13098
PF13462
Thioredoxin_2
Thioredoxin_4
Thioredoxin-like domain
Thioredoxin
2.30E-14
8.50E-09
WP_178319301.1 17024 16394 - 209PF13649
PF03848
PF08241
PF08242
Methyltransf_25
TehB
Methyltransf_11
Methyltransf_12
Methyltransferase domain
Tellurite resistance protein TehB
Methyltransferase domain
Methyltransferase domain
2.00E-10
1.30E-05
2.10E-05
7.90E-04
WP_004973824.1 17402 17054 - 115PF02627CMDCarboxymuconolactone decarboxylase family1.40E-20
WP_004973821.1 17695 19903 + 735PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.10E-75
2.90E-73
1.50E-08
WP_004973819.1 20398 20083 - 104PF01381
PF13560
PF15731
PF20432
PF12844
HTH_3
HTH_31
MqsA_antitoxin
Xre-like-HTH
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Antitoxin component of bacterial toxin-antitoxin system, MqsA
Antitoxin Xre-like helix-turn-helix domain
Helix-turn-helix domain
9.40E-08
5.20E-06
4.50E-05
1.80E-04
3.60E-04
WP_253116783.1 22109 20813 - 431PF00817
PF11799
PF13438
PF11798
PF11731
IMS
IMS_C
DUF4113
IMS_HHH
Cdd1
impB/mucB/samB family
impB/mucB/samB family C-terminal domain
Domain of unknown function (DUF4113)
IMS family HHH motif
Pathogenicity locus
1.00E-27
1.30E-12
9.30E-08
1.20E-05
5.70E-04
WP_253116785.1 22764 22149 - 204PF00717Peptidase_S24Peptidase S24-like1.40E-16
WP_168419301.1 22961 23543 + 193NO PFAM MATCH---
WP_253116787.1 23635 24823 + 395PF01636
PF06293
PF07914
PF01633
PF02958
APH
Kdo
DUF1679
Choline_kinase
EcKL
Phosphotransferase enzyme family
Lipopolysaccharide kinase (Kdo/WaaP) family
Uncharacterized oxidoreductase dhs-27
Choline/ethanolamine kinase
Ecdysteroid kinase-like family
8.50E-22
6.70E-05
1.10E-04
3.20E-04
9.20E-04
WP_253116789.1 26474 25469 - 334PF13379
PF09084
NMT1_2
NMT1
NMT1-like family
NMT1/THI5 like
7.80E-54
9.80E-07
WP_070154220.1 27063 26484 - 192PF03861
PF00072
ANTAR
Response_reg
ANTAR domain
Response regulator receiver domain
7.50E-14
6.00E-05

Results for WP_037386776.1 [Sinorhizobium americanum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_132076268.1 62001 62712 + 236PF05988
PF00578
DUF899
AhpC-TSA
Bacterial protein of unknown function (DUF899)
AhpC/TSA family
3.00E-64
4.50E-04
WP_037386762.1 62910 64014 + 367NO PFAM MATCH---
WP_132076271.1 64357 65032 + 224PF13411
PF00376
MerR_1
MerR
MerR HTH family regulatory protein
MerR family regulatory protein
9.90E-15
3.00E-08
WP_037386768.1 65307 65550 + 80PF05433Rick_17kDa_AntiGlycine zipper 2TM domain2.80E-05
WP_082912157.1 65668 66019 + 116PF00036
PF13405
PF13202
PF13499
PF13833
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_8
EF hand
EF-hand domain
EF hand
EF-hand domain pair
EF-hand domain pair
1.40E-15
2.50E-15
5.20E-15
1.00E-11
3.10E-07
WP_037386771.1 66761 66074 - 228NO PFAM MATCH---
WP_037387272.1 67967 66782 - 394NO PFAM MATCH---
WP_037386774.1 68810 68003 - 268PF07812TfuATfuA-like protein1.40E-40
WP_037386776.1 70023 68814 - 402PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-43
WP_037386778.1 73081 70006 - 1024PF13191
PF00211
PF13401
AAA_16
Guanylate_cyc
AAA_22
AAA ATPase domain
Adenylate and Guanylate cyclase catalytic domain
AAA domain
4.80E-16
4.70E-08
1.30E-04
WP_132076274.1 73990 73357 - 210PF01810LysELysE type translocator2.70E-29
WP_132076277.1 75153 74025 - 375PF13604
PF13538
PF13245
PF01443
PF05970
AAA_30
UvrD_C_2
AAA_19
Viral_helicase1
PIF1
AAA domain
UvrD-like helicase C-terminal domain
AAA domain
Viral (Superfamily 1) RNA helicase
PIF1-like helicase
8.90E-25
1.90E-18
1.10E-14
2.20E-10
8.90E-08
WP_064252522.1 75417 76506 + 362PF05145AbrBTransition state regulatory protein AbrB4.40E-90
WP_037415719.1 76637 77012 + 124PF03640Lipoprotein_15Secreted repeat of unknown function3.70E-34
WP_132076280.1 76995 77544 + 182PF08281
PF04542
PF04545
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
1.60E-14
6.30E-10
1.10E-08
WP_132076283.1 77540 78353 + 270NO PFAM MATCH---
WP_037386793.1 78740 78362 - 125PF02211NHase_betaNitrile hydratase beta subunit1.30E-07

Results for WP_064517507.1 [Buttiauxella sp. BIGb0552] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_243839601.1 294434 292217 - 738PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
2.60E-54
8.60E-16
1.10E-05
6.60E-04
WP_034456367.1 294979 294691 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.30E-29
1.10E-07
1.70E-04
WP_064517522.1 296746 295069 - 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.20E-98
6.80E-12
1.50E-07
WP_064517519.1 297628 296941 - 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.40E-84
9.80E-08
4.00E-05
3.10E-04
6.10E-04
WP_134183574.1 298566 297807 - 252PF01435Peptidase_M48Peptidase family M485.00E-26
WP_134184177.1 300035 298751 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.50E-150
WP_134183576.1 301200 300114 - 361PF00266Aminotran_5Aminotransferase class-V1.30E-66
WP_064517511.1 302053 301360 - 230PF04239DUF421Protein of unknown function (DUF421)2.50E-15
WP_064517507.1 302191 303949 + 585PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-82
4.80E-67
WP_064517504.1 304355 305213 + 285PF01226Form_Nir_transFormate/nitrite transporter1.30E-73
WP_064517500.1 305266 307549 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.30E-203
5.20E-44
WP_064517497.1 307749 308490 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.80E-32
2.30E-18
3.40E-06
WP_064517495.1 309707 308558 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.10E-31
3.40E-11
6.00E-07
6.50E-05
WP_064517491.1 310852 309991 - 286PF04976DmsCDMSO reductase anchor subunit (DmsC)1.10E-105
WP_064517490.1 311471 310853 - 205PF13247
PF12797
PF00037
PF13187
PF13237
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_10
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
9.90E-27
5.10E-13
8.50E-13
4.50E-12
2.40E-10
WP_064517487.1 313926 311481 - 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.50E-107
1.10E-28
2.70E-18
WP_064517484.1 315572 314279 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.30E-36
7.70E-32

Results for WP_046812350.1 [Acinetobacter pittii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_080947713.1 21516 22209 + 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
9.00E-11
WP_046812355.1 23197 22252 - 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
2.20E-12
3.60E-06
WP_000470071.1 24286 23209 - 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
3.30E-54
9.40E-19
1.30E-05
WP_046812354.1 25707 24519 - 395PF03573OprDouter membrane porin, OprD family1.90E-35
WP_080947716.1 26673 25719 - 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 19.70E-68
WP_046812353.1 28384 26698 - 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
9.80E-76
1.00E-05
1.00E-04
WP_046812352.1 28756 30103 + 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
1.20E-47
8.30E-25
2.60E-09
WP_046812351.1 30134 31415 + 426PF03573OprDouter membrane porin, OprD family2.30E-105
WP_046812350.1 31668 33867 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.60E-75
5.10E-73
1.80E-08
WP_046812349.1 35602 33931 - 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
1.00E-17
1.20E-09
2.60E-05
4.30E-05
WP_046812348.1 36523 35629 - 297PF07859
PF10340
PF20434
PF00326
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
2.20E-53
1.10E-10
4.10E-09
5.00E-05
WP_046812347.1 37450 36595 - 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.80E-50
6.10E-36
1.10E-11
WP_046812346.1 38982 37494 - 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.50E-20
7.70E-17
5.70E-12
2.80E-11
4.00E-09
WP_080947712.1 39117 40131 + 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.00E-37
9.30E-15
2.30E-06
WP_046812344.1 41018 40142 - 291PF04072LCMLeucine carboxyl methyltransferase2.00E-37
WP_046812343.1 42655 41131 - 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.50E-17
3.40E-15
7.70E-14
1.00E-10
1.60E-07
WP_017386375.1 43511 42677 - 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.50E-48
2.00E-41
3.00E-13

Results for WP_001491178.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_267843465.1 0 509 + 168PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
5.90E-25
5.90E-07
WP_000111043.1 1331 590 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292812.1 3805 1522 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000642546.1 4717 3859 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001491178.1 6883 5122 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-83
1.80E-66
WP_000642849.1 7012 7705 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 7903 8992 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000445231.1 9062 10346 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_001295345.1 10514 11279 + 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000125016.1 11451 12135 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 12245 13919 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 14078 14363 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
NP_415433.4 14570 16834 + 754INFERRED GENE---

Results for WP_056771810.1 [Rahnella rivi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_056769245.1 105363 105981 + 205PF13247
PF00037
PF12797
PF13187
PF12838
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
2.00E-27
5.40E-13
1.80E-12
4.50E-12
3.20E-11
WP_217203996.1 105982 106840 + 285PF04976DmsCDMSO reductase anchor subunit (DmsC)4.60E-96
WP_217203997.1 106913 107522 + 202PF02613Nitrate_red_delNitrate reductase delta subunit5.00E-23
WP_238485162.1 107542 108076 + 177PF00037
PF12838
PF12837
PF13187
PF14697
Fer4
Fer4_7
Fer4_6
Fer4_9
Fer4_21
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
8.80E-18
8.00E-13
2.60E-12
1.40E-11
9.60E-11
WP_056769251.1 108209 109355 + 381PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
8.60E-34
2.40E-08
6.20E-08
4.80E-05
WP_056769253.1 110195 109454 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.70E-30
2.60E-18
6.30E-06
WP_122094770.1 112747 110464 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.20E-205
1.50E-43
NP_309014.1 112821 113679 + 286INFERRED GENE---
WP_056771810.1 115917 114153 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-83
2.90E-65
WP_217203999.1 116223 117309 + 361PF00266Aminotran_5Aminotransferase class-V1.70E-67
WP_238485163.1 117389 118697 + 435PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.30E-150
WP_056769261.1 118892 119591 + 232PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.30E-82
1.20E-07
7.10E-06
7.50E-05
WP_235533387.1 119747 121424 + 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.00E-98
1.30E-11
4.10E-07
WP_013574835.1 121484 121769 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.80E-28
4.00E-07
WP_217204000.1 122013 124293 + 759PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
8.70E-52
9.20E-13
2.80E-08
WP_217204001.1 124331 126080 + 582PF00664
PF00005
PF02463
PF13191
PF13401
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
9.40E-62
1.30E-35
3.50E-10
8.10E-05
1.10E-04
WP_217204002.1 126076 127066 + 329PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase4.10E-117

Results for WP_071727890.1 [Bacillus anthracis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_071727894.1 104381 104111 - 89NO PFAM MATCH---
WP_001036560.1 104759 104399 - 119NO PFAM MATCH---
WP_001178301.1 105076 104893 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109889.1 105482 105104 - 125NO PFAM MATCH---
WP_000428510.1 105694 105484 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_267580118.1 106520 109388 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.90E-63
5.00E-55
5.00E-37
WP_071727892.1 109521 110781 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.80E-81
3.40E-20
3.70E-13
1.60E-04
WP_071727891.1 110907 112827 + 639NO PFAM MATCH---
WP_071727890.1 112823 114773 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-82
WP_088313356.1 114789 116331 + 513PF00881NitroreductaseNitroreductase family5.60E-13
WP_016109564.1 116422 117013 + 197INFERRED GENE---
WP_078418809.1 117455 117044 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.10E-53
WP_136444310.1 118091 117599 - 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.00E-11
4.30E-07
2.00E-05
WP_088313352.1 119527 118192 - 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
7.10E-64
5.80E-20
7.10E-17
3.20E-15
2.90E-10
WP_071727885.1 119724 120156 + 143NO PFAM MATCH---
WP_016128956.1 120199 120426 + 75INFERRED GENE---
WP_071727884.1 121284 120510 - 257PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
9.40E-05
1.10E-04

Results for WP_047436735.1 [Aeromonas veronii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_236302084.1 78503 78938 + 144PF00085
PF13098
PF13905
PF04756
PF13899
Thioredoxin
Thioredoxin_2
Thioredoxin_8
OST3_OST6
Thioredoxin_7
Thioredoxin
Thioredoxin-like domain
Thioredoxin-like
OST3 / OST6 family, transporter family
Thioredoxin-like
2.30E-30
1.00E-09
8.90E-09
4.60E-06
1.10E-05
WP_005333606.1 79099 80482 + 460PF00939
PF03600
PF06808
Na_sulph_symp
CitMHS
DctM
Sodium:sulfate symporter transmembrane region
Citrate transporter
Tripartite ATP-independent periplasmic transporter, DctM component
5.80E-50
3.00E-32
8.60E-05
WP_236302085.1 83020 80545 - 824PF00343PhosphorylaseCarbohydrate phosphorylase0.00E+00
WP_005333612.1 83593 83395 - 65PF14056DUF4250Domain of unknown function (DUF4250)6.60E-20
WP_139429787.1 83823 84309 + 161NO PFAM MATCH---
WP_041235073.1 84716 85154 + 145PF03692CxxCxxCCPutative zinc- or iron-chelating domain4.10E-09
WP_005352571.1 88006 85723 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.80E-202
4.60E-43
WP_005333620.1 88901 88052 - 282PF01226Form_Nir_transFormate/nitrite transporter1.30E-74
WP_047436735.1 91043 89282 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.30E-77
1.00E-64
WP_021231363.1 92669 91235 - 477PF00232
PF00331
Glyco_hydro_1
Glyco_hydro_10
Glycosyl hydrolase family 1
Glycosyl hydrolase family 10
9.40E-173
3.40E-04
WP_236302086.1 92835 93699 + 287PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
7.90E-30
8.30E-16
WP_236302087.1 94485 93735 - 249PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.50E-20
WP_236302088.1 96926 94661 - 754PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
5.00E-157
2.10E-126
WP_136501226.1 97202 98111 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.30E-39
9.90E-17
WP_047436724.1 99053 98117 - 311PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.10E-39
1.40E-17
WP_047436721.1 99245 99983 + 245PF00857IsochorismataseIsochorismatase family4.70E-21
WP_047436718.1 100042 100942 + 299PF05726
PF02678
Pirin_C
Pirin
Pirin C-terminal cupin domain
Pirin
1.60E-20
3.60E-15

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_065223893.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_241677378.1 328842 326913 - 642NO PFAM MATCH---
WP_001036584.1 329625 329262 - 120NO PFAM MATCH---
WP_001178291.1 329940 329757 - 60PF13121DUF3976Domain of unknown function (DUF3976)8.70E-27
WP_065223895.1 330346 329968 - 125NO PFAM MATCH---
WP_000428506.1 330558 330348 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_065223894.1 331382 334250 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.20E-36
WP_000569896.1 334383 335643 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_001061555.1 335767 337687 + 639NO PFAM MATCH---
WP_065223893.1 337683 339633 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.30E-84
WP_070179961.1 339648 341190 + 513PF00881NitroreductaseNitroreductase family8.70E-13
WP_065223891.1 341281 341872 + 196PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.60E-18
1.00E-17
7.30E-17
2.50E-12
5.50E-12
WP_000996782.1 342313 341902 - 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_088349954.1 343808 342473 - 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
1.00E-64
2.30E-20
6.20E-17
3.10E-15
2.40E-10
WP_000332407.1 344005 344437 + 143NO PFAM MATCH---
WP_137049670.1 345718 344482 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
1.30E-21
2.90E-05
WP_065223887.1 346523 345737 - 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.00E-05
1.20E-04
WP_000424522.1 346719 347553 + 277NO PFAM MATCH---

Results for WP_000615601.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074626135.1 2447085 2447769 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.50E-74
WP_047385758.1 2448617 2447783 - 277PF11667DUF3267Putative zincin peptidase8.40E-04
WP_074626132.1 2448813 2449599 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.20E-06
7.80E-04
WP_242785508.1 2449618 2450854 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
9.60E-22
1.30E-05
WP_000332393.1 2451322 2450899 - 140PF13157EnasEndospore appendages5.70E-04
WP_242785509.1 2451521 2452856 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.80E-64
3.70E-20
9.20E-17
1.80E-15
2.60E-10
WP_000996782.1 2453015 2453426 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_074626122.1 2454998 2453456 - 513PF00881NitroreductaseNitroreductase family3.20E-13
WP_000615601.1 2456963 2455013 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-84
WP_001061563.1 2458879 2456959 - 639NO PFAM MATCH---
WP_242785510.1 2460263 2459003 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.40E-81
3.40E-20
4.10E-13
1.70E-04
WP_000197124.1 2463264 2460396 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.10E-63
5.10E-55
1.30E-36
WP_000428506.1 2464081 2464291 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_001109911.1 2464293 2464671 + 125NO PFAM MATCH---
WP_001178294.1 2464699 2464882 + 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_001042762.1 2465014 2465377 + 120NO PFAM MATCH---
WP_001195087.1 2465405 2465650 + 81INFERRED GENE---

Results for WP_046800019.1 [Agrobacterium sp. LC34] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046799792.1 187642 186559 - 360PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.70E-05
WP_046799793.1 188553 187641 - 303PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.40E-13
WP_046799794.1 189994 188620 - 457NO PFAM MATCH---
WP_046799795.1 190157 191297 + 379PF00480
PF13412
PF12802
PF01047
ROK
HTH_24
MarR_2
MarR
ROK family
Winged helix-turn-helix DNA-binding
MarR family
MarR family
1.40E-22
6.30E-07
5.90E-06
7.80E-04
WP_225341538.1 191649 191325 - 107NO PFAM MATCH---
WP_046799796.1 192322 191830 - 163NO PFAM MATCH---
WP_046799797.1 192494 194447 + 650PF03704
PF13414
BTAD
TPR_11
Bacterial transcriptional activator domain
TPR repeat
4.50E-21
1.40E-04
WP_046799798.1 194455 194884 + 142NO PFAM MATCH---
WP_046800019.1 194921 196115 + 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.60E-47
WP_046799799.1 196111 196825 + 237PF07812TfuATfuA-like protein2.80E-39
WP_046799800.1 196821 197940 + 372NO PFAM MATCH---
WP_046799801.1 198079 198517 + 145PF01381
PF13560
PF12844
PF13443
HTH_3
HTH_31
HTH_19
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
2.80E-13
4.80E-11
2.30E-07
1.50E-06
WP_046799802.1 198611 198845 + 77NO PFAM MATCH---
WP_046800020.1 201374 199022 - 783PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
3.20E-157
1.10E-125
WP_046799804.1 202534 201751 - 260PF00005
PF13304
PF02463
PF09818
PF13604
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA domain
1.00E-29
4.60E-11
2.20E-06
1.80E-05
8.10E-05
WP_046799805.1 203866 202552 - 437PF02653BPD_transp_2Branched-chain amino acid transport system / permease component2.00E-25
WP_046799806.1 204985 203944 - 346PF13407
PF00532
Peripla_BP_4
Peripla_BP_1
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
2.80E-59
3.60E-07

Results for WP_042310147.1 [Citrobacter werkmanii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_042309449.1 2770851 2769102 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
5.10E-61
4.20E-36
1.40E-10
1.50E-05
4.80E-05
WP_042309451.1 2773152 2770887 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.60E-49
1.80E-17
4.00E-05
WP_003035780.1 2773642 2773357 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.80E-29
5.40E-07
4.30E-04
WP_003035776.1 2775475 2773801 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.10E-100
7.50E-12
9.00E-07
WP_032939922.1 2776272 2775588 - 227PF02224
PF13189
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
3.60E-84
1.60E-06
7.30E-04
WP_042309453.1 2777727 2776443 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.00E-150
WP_042309454.1 2778884 2777795 - 362PF00266Aminotran_5Aminotransferase class-V1.60E-70
WP_042309456.1 2779790 2779097 - 230PF04239DUF421Protein of unknown function (DUF421)9.10E-17
WP_042310147.1 2779925 2781686 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.30E-83
3.00E-68
WP_032939923.1 2782090 2782948 + 285PF01226Form_Nir_transFormate/nitrite transporter2.00E-74
WP_006685273.1 2783007 2785290 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-207
4.70E-44
WP_003035751.1 2785475 2786216 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-32
1.30E-18
4.50E-06
WP_042309459.1 2786454 2787249 + 264NO PFAM MATCH---
WP_042309464.1 2788103 2787254 - 282PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
2.40E-14
2.90E-07
WP_042309466.1 2788224 2788500 + 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.30E-12
WP_042309469.1 2788517 2789783 + 421PF03611EIIC-GATPTS system sugar-specific permease component2.20E-119
WP_042309470.1 2789795 2790593 + 265PF00456
PF13292
PF02775
PF00676
Transketolase_N
DXP_synthase_N
TPP_enzyme_C
E1_dh
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Dehydrogenase E1 component
3.40E-42
9.60E-15
1.20E-04
1.80E-04

Results for WP_048937410.1 [Sphingobium sp. MP9-4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_048937404.1 70000 70927 + 308PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann fold1.30E-17
WP_048937405.1 70946 72512 + 521PF06964Alpha-L-AF_CAlpha-L-arabinofuranosidase C-terminal domain5.10E-45
WP_048937406.1 72594 73623 + 342PF04616Glyco_hydro_43Glycosyl hydrolases family 436.70E-56
WP_048937407.1 73675 75109 + 477PF04616Glyco_hydro_43Glycosyl hydrolases family 431.80E-63
WP_010338082.1 75368 78197 + 942PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
2.40E-31
4.60E-15
WP_048937408.1 78318 80349 + 676PF00754
PF03200
PF01204
PF17389
F5_F8_type_C
Glyco_hydro_63
Trehalase
Bac_rhamnosid6H
F5/8 type C domain
Glycosyl hydrolase family 63 C-terminal domain
Trehalase
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
4.60E-09
3.00E-05
5.20E-05
6.70E-04
WP_122928353.1 80466 82491 + 674PF07719
PF13431
PF00515
PF14559
PF13181
TPR_2
TPR_17
TPR_1
TPR_19
TPR_8
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.70E-08
5.60E-07
2.10E-05
5.60E-05
1.30E-04
WP_048937409.1 83170 82477 - 230PF07812TfuATfuA-like protein4.60E-38
WP_048937410.1 84345 83166 - 392PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-63
WP_048937411.1 84629 84359 - 89NO PFAM MATCH---
WP_004208507.1 85050 84735 - 104NO PFAM MATCH---
WP_234415719.1 87304 85111 - 730NO PFAM MATCH---
WP_137406123.1 88726 87400 - 441PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
5.40E-37
3.10E-18
WP_122928834.1 90000 88722 - 425PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
2.50E-34
6.20E-12
WP_048937414.1 90066 92229 + 720PF01804Penicil_amidasePenicillin amidase1.10E-121
WP_048937415.1 92238 93603 + 454PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
4.30E-22
1.20E-14
WP_048937416.1 93599 94724 + 374PF01244Peptidase_M19Membrane dipeptidase (Peptidase family M19)2.60E-73

Results for WP_008441436.1 [Halorubrum sp. GN11GM_10-3_MGM] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008441411.1 33200 33950 + 249PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.00E-24
WP_008441412.1 34802 33959 - 280NO PFAM MATCH---
WP_049905518.1 36049 34948 - 366PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family1.30E-69
WP_008441430.1 36162 36324 + 53NO PFAM MATCH---
WP_008441432.1 37626 36387 - 412PF07282
PF01385
OrfB_Zn_ribbon
OrfB_IS605
Putative transposase DNA-binding domain
Probable transposase
1.20E-23
5.50E-20
WP_008441433.1 38467 37873 - 197PF00072Response_regResponse regulator receiver domain1.80E-11
WP_008441434.1 40076 38798 - 425PF00266
PF01041
PF00155
PF01212
PF01053
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotransferase class-V
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class I and II
Beta-eliminating lyase
Cys/Met metabolism PLP-dependent enzyme
3.10E-149
1.20E-11
1.50E-07
4.10E-06
1.60E-04
WP_008441435.1 40548 40209 - 112PF07883
PF02311
PF07847
PF00190
Cupin_2
AraC_binding
PCO_ADO
Cupin_1
Cupin domain
AraC-like ligand binding domain
PCO_ADO
Cupin
2.70E-17
6.70E-09
1.70E-04
6.80E-04
WP_008441436.1 42335 40643 - 563PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-53
WP_008441437.1 43271 42452 - 272PF19138DUF5821Family of unknown function (DUF5821)1.30E-93
WP_008441438.1 43511 44759 + 415PF00464
PF01212
PF00155
SHMT
Beta_elim_lyase
Aminotran_1_2
Serine hydroxymethyltransferase
Beta-eliminating lyase
Aminotransferase class I and II
5.70E-147
2.90E-04
3.30E-04
WP_008441439.1 44856 45267 + 136PF11255DUF3054Protein of unknown function (DUF3054)2.70E-22
WP_008441440.1 45449 45692 + 80NO PFAM MATCH---
WP_008441441.1 45750 46752 + 333PF02423
PF01488
OCD_Mu_crystall
Shikimate_DH
Ornithine cyclodeaminase/mu-crystallin family
Shikimate / quinate 5-dehydrogenase
2.50E-56
5.60E-05
WP_008441442.1 46788 47298 + 169PF12850
PF00149
Metallophos_2
Metallophos
Calcineurin-like phosphoesterase superfamily domain
Calcineurin-like phosphoesterase
5.50E-34
8.80E-07
WP_008441444.1 47390 47636 + 81PF04014
PF15937
MazE_antitoxin
PrlF_antitoxin
Antidote-toxin recognition MazE, bacterial antitoxin
prlF antitoxin for toxin YhaV_toxin
8.80E-08
2.60E-05
WP_008441445.1 47635 48064 + 142PF01850PINPIN domain2.40E-17

Results for WP_002990434.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194826.1 [Salmonella enterica subsp. enterica serovar Sandiego] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000534679.1 78924 79788 + 287PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
1.20E-119
7.80E-04
WP_000109271.1 80137 81286 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_001134260.1 81503 82925 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
7.50E-14
WP_000067928.1 84004 83206 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 84122 84449 + 109INFERRED GENE---
WP_001145572.1 84579 85539 + 319PF11047SopDSalmonella outer protein D5.90E-180
WP_001292803.1 87893 85610 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-208
4.80E-44
WP_000642539.1 88810 87952 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_000194826.1 90975 89214 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.00E-82
3.30E-65
WP_000642868.1 91111 91804 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000079590.1 91989 93078 + 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000445190.1 93148 94432 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.10E-151
WP_000792301.1 94574 95336 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 95508 96192 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 96305 97979 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 98134 98419 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_071646054.1 98648 100913 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
5.20E-54
1.70E-14
5.00E-07

Results for WP_001764662.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003047821.1 [Streptococcus canis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_164405823.1 1262063 1260104 - 652PF01653
PF03120
PF12826
PF00533
PF14520
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
NAD-dependent DNA ligase adenylation domain
NAD-dependent DNA ligase OB-fold domain
Helix-hairpin-helix motif
BRCA1 C Terminus (BRCT) domain
Helix-hairpin-helix domain
2.40E-116
9.00E-35
8.80E-18
5.30E-14
3.80E-12
WP_003047843.1 1262813 1262309 - 167PF06177QueTQueT transporter1.80E-32
WP_164405824.1 1265995 1263175 - 939PF03372
PF19580
PF01336
PF18942
Exo_endo_phos
Exo_endo_phos_3
tRNA_anti-codon
DUF5689
Endonuclease/Exonuclease/phosphatase family
Endonuclease/Exonuclease/phosphatase family
OB-fold nucleic acid binding domain
Family of unknown function (DUF5689)
3.70E-06
4.70E-06
8.50E-05
6.10E-04
WP_164228841.1 1267457 1266338 - 372PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
2.20E-41
4.20E-20
9.10E-08
WP_003047833.1 1268581 1267453 - 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
7.20E-26
1.40E-18
2.20E-11
WP_003047830.1 1269513 1268589 - 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
2.30E-34
2.40E-14
1.40E-04
WP_164405825.1 1270221 1269534 - 228PF19393DUF5968Family of unknown function (DUF5968)3.70E-20
WP_003047824.1 1270892 1270220 - 223PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.20E-10
WP_003047821.1 1272225 1270866 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-43
WP_003047818.1 1273301 1272236 - 354NO PFAM MATCH---
WP_164405826.1 1274248 1273297 - 316PF00881NitroreductaseNitroreductase family2.10E-13
WP_012766767.1 1274629 1274467 - 53NO PFAM MATCH---
WP_003047814.1 1276443 1275135 - 435PF00113
PF03952
PF07476
PF13378
Enolase_C
Enolase_N
MAAL_C
MR_MLE_C
Enolase, C-terminal TIM barrel domain
Enolase, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
Enolase C-terminal domain-like
1.30E-129
1.30E-60
3.10E-07
1.30E-06
WP_164228829.1 1276666 1277122 + 151PF07997DUF1694Protein of unknown function (DUF1694)3.80E-28
WP_076611512.1 1277175 1277609 + 144INFERRED GENE---
WP_093998492.1 1279626 1277901 - 574PF06160EzrASeptation ring formation regulator, EzrA9.20E-185
WP_164405827.1 1281929 1279976 - 650PF00204
PF00986
PF02518
PF01751
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
DNA gyrase B
DNA gyrase B subunit, carboxyl terminus
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Toprim domain
4.90E-65
6.20E-30
4.40E-22
8.50E-18

Results for WP_015016859.1 [Streptococcus dysgalactiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046177190.1 1551 1947 + 131NO PFAM MATCH---
WP_046177189.1 2164 2530 + 121PF05973Gp49Phage derived protein Gp49-like (DUF891)1.10E-22
WP_027971722.1 2519 2816 + 98PF01381
PF13744
PF13560
PF13443
PF12844
HTH_3
HTH_37
HTH_31
HTH_26
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
Helix-turn-helix domain
1.60E-14
2.50E-08
3.20E-06
1.40E-04
7.90E-04
WP_046177188.1 2837 4043 + 401NO PFAM MATCH---
WP_165626014.1 4049 4217 + 55NO PFAM MATCH---
WP_012766767.1 5114 5276 + 53NO PFAM MATCH---
WP_003061458.1 5494 6445 + 316PF00881NitroreductaseNitroreductase family6.00E-14
WP_046177187.1 6441 7506 + 354NO PFAM MATCH---
WP_015016859.1 7518 8877 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.20E-43
WP_046177186.1 8851 9526 + 224PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like9.60E-11
WP_015016860.1 9522 10209 + 228PF19393DUF5968Family of unknown function (DUF5968)2.30E-21
WP_046177185.1 10229 11153 + 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
1.70E-33
1.40E-14
2.90E-04
WP_046177184.1 11161 12289 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.40E-25
5.30E-20
5.60E-11
WP_003057434.1 12285 13404 + 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
2.00E-41
6.40E-20
WP_153227912.1 13759 16585 + 941PF19580
PF03372
PF01336
PF18942
PF00746
Exo_endo_phos_3
Exo_endo_phos
tRNA_anti-codon
DUF5689
Gram_pos_anchor
Endonuclease/Exonuclease/phosphatase family
Endonuclease/Exonuclease/phosphatase family
OB-fold nucleic acid binding domain
Family of unknown function (DUF5689)
LPXTG cell wall anchor motif
1.40E-06
7.80E-06
2.30E-05
5.90E-05
1.50E-04
WP_003050124.1 16915 17419 + 167PF06177QueTQueT transporter3.20E-33
WP_046177182.1 17565 19524 + 652PF01653
PF03120
PF12826
PF00533
PF14520
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
NAD-dependent DNA ligase adenylation domain
NAD-dependent DNA ligase OB-fold domain
Helix-hairpin-helix motif
BRCA1 C Terminus (BRCT) domain
Helix-hairpin-helix domain
2.90E-115
3.80E-35
1.40E-16
4.60E-14
1.80E-09

Results for WP_024595461.1 [Pseudoalteromonas sp. LC2018020214] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007377323.1 3584783 3585158 + 124PF03965
PF01978
Penicillinase_R
TrmB
Penicillinase repressor
Sugar-specific transcriptional regulator TrmB
7.50E-35
4.00E-04
WP_197121530.1 3585167 3586376 + 402PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
6.30E-37
1.80E-17
WP_024605945.1 3586833 3586449 - 127PF01124MAPEGMAPEG family1.20E-20
WP_200219653.1 3587068 3587947 + 292PF00892EamAEamA-like transporter family1.60E-12
WP_002962354.1 3588331 3588013 - 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein5.80E-21
WP_024595458.1 3589863 3588330 - 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
7.60E-32
5.20E-05
WP_193226766.1 3590800 3589951 - 282PF00753Lactamase_BMetallo-beta-lactamase superfamily6.50E-09
WP_200219654.1 3593144 3590858 - 761PF01804Penicil_amidasePenicillin amidase2.20E-123
WP_024595461.1 3593300 3595061 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.20E-78
3.10E-58
WP_138489822.1 3595176 3598539 + 1120PF02518
PF00072
PF00512
PF03924
PF13492
HATPase_c
Response_reg
HisKA
CHASE
GAF_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
GAF domain
1.20E-28
4.40E-23
7.20E-19
9.60E-17
2.70E-06
WP_002962344.1 3598582 3599212 + 209PF04337DUF480Protein of unknown function, DUF4806.60E-60
WP_024589633.1 3599280 3600111 + 276PF02540NAD_synthaseNAD synthase1.10E-63
WP_039486916.1 3600334 3601054 + 239PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
2.00E-26
3.80E-24
1.30E-07
5.70E-04
WP_002962341.1 3601076 3601631 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I3.40E-77
WP_002962340.1 3601635 3601992 + 118PF02152FolBDihydroneopterin aldolase3.60E-27
WP_033021866.1 3602443 3602008 - 144PF09335SNARE_assocSNARE associated Golgi protein7.80E-14
WP_002962338.1 3603037 3602671 - 121PF09685DUF4870Domain of unknown function (DUF4870)1.70E-40

Results for WP_046457978.1 [Obesumbacterium proteus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_130985056.1 93101 91352 - 582PF00664
PF00005
PF02463
PF13401
PF03193
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
RsgA GTPase
3.50E-56
1.40E-36
6.10E-11
4.40E-05
4.50E-05
WP_234556001.1 95405 93137 - 755PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.00E-43
1.60E-15
7.00E-10
WP_004095742.1 95948 95663 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.20E-28
2.20E-07
WP_025800968.1 97710 96033 - 558PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.10E-98
7.10E-11
8.70E-07
WP_025800967.1 98621 97931 - 229PF02224
PF13189
PF13238
PF13671
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_33
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
2.50E-82
1.10E-06
1.40E-06
2.50E-04
3.00E-04
WP_234555839.1 100254 98973 - 426PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.70E-148
WP_046457977.1 101496 100407 - 362PF00266Aminotran_5Aminotransferase class-V9.90E-69
WP_025800963.1 103005 101958 - 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.50E-63
3.10E-26
WP_046457978.1 103148 104909 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.60E-83
2.40E-68
WP_002211331.1 105428 106286 + 286INFERRED GENE---
WP_131020645.1 106347 108630 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.90E-206
1.50E-43
WP_025800959.1 108928 109669 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4.00E-30
6.40E-18
1.60E-05
WP_234555835.1 110221 110677 + 151PF00359PTS_EIIA_2Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 21.20E-04
WP_234555833.1 111894 110754 - 379PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
7.10E-26
1.70E-08
2.50E-05
8.80E-05
WP_234555832.1 112598 112010 - 195PF12837
PF00037
PF12838
PF13187
PF13237
Fer4_6
Fer4
Fer4_7
Fer4_9
Fer4_10
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
8.10E-16
1.50E-14
9.30E-13
1.50E-12
2.90E-09
WP_234555830.1 113212 112597 - 204PF02613Nitrate_red_delNitrate reductase delta subunit1.10E-24
WP_046457984.1 114185 113324 - 286PF04976DmsCDMSO reductase anchor subunit (DmsC)2.30E-106

Results for WP_015432379.1 [Bibersteinia trehalosi USDA-ARS-USMARC-188] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025267110.1 1325566 1324582 - 327PF01409
PF02912
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA synthetases class II core domain (F)
Aminoacyl tRNA synthetase class II, N-terminal domain
8.00E-103
3.70E-27
WP_015432386.1 1325820 1326501 + 226PF01865PhoU_divProtein of unknown function DUF472.40E-66
WP_025267111.1 1326512 1327775 + 420PF01384PHO4Phosphate transporter family1.70E-109
WP_015432384.1 1327855 1328461 + 201PF08239SH3_3Bacterial SH3 domain1.50E-08
WP_025267112.1 1329787 1328749 - 345PF13416
PF01547
PF13343
PF13531
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.90E-40
3.20E-30
1.40E-29
4.80E-10
WP_015432382.1 1331448 1329972 - 491PF10150
PF00575
RNase_E_G
S1
Ribonuclease E/G family
S1 RNA binding domain
1.30E-101
7.70E-06
WP_015432381.1 1332022 1331542 - 159PF13353
PF13394
Fer4_12
Fer4_14
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.00E-50
2.20E-34
WP_015432380.1 1334161 1332034 - 708PF13597
PF01228
PF03477
NRDD
Gly_radical
ATP-cone
Anaerobic ribonucleoside-triphosphate reductase
Glycine radical
ATP cone domain
1.30E-181
1.50E-27
4.00E-22
WP_015432379.1 1334453 1336217 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.80E-78
2.00E-63
WP_025267113.1 1337264 1336253 - 336PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.00E-08
6.60E-06
3.20E-05
WP_025267114.1 1337738 1337414 - 107PF03840SecGPreprotein translocase SecG subunit1.00E-19
WP_015432375.1 1338808 1337926 - 293PF00701DHDPSDihydrodipicolinate synthetase family4.60E-99
WP_025267115.1 1339752 1338885 - 288PF01418
PF01380
PF13580
HTH_6
SIS
SIS_2
Helix-turn-helix domain, rpiR family
SIS domain
SIS domain
6.50E-25
2.70E-24
1.50E-10
WP_025267116.1 1340226 1339752 - 157PF04074DUF386YhcH/YjgK/YiaL3.60E-34
WP_025267117.1 1341200 1340396 - 267PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family1.30E-23
WP_025267118.1 1342635 1341264 - 456PF03553
PF13726
PF03600
PF03606
Na_H_antiporter
Na_H_antiport_2
CitMHS
DcuC
Na+/H+ antiporter family
Na+-H+ antiporter family
Citrate transporter
C4-dicarboxylate anaerobic carrier
3.50E-66
8.70E-23
5.30E-12
4.50E-04
WP_025267119.1 1343846 1342922 - 307PF01171ATP_bind_3PP-loop family4.90E-15

Results for WP_016802978.1 [Acinetobacter pittii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016802986.1 17338 18637 + 432PF07690
PF06779
PF12832
MFS_1
MFS_4
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
2.50E-49
3.40E-07
3.80E-05
WP_016802985.1 18686 19586 + 299PF05681FumeraseFumarate hydratase (Fumerase)3.50E-74
WP_016802984.1 19582 20191 + 202PF05683Fumerase_CFumarase C-terminus2.10E-41
WP_025465435.1 21247 20233 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.10E-37
1.10E-14
6.50E-05
WP_016802982.1 21382 22870 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.60E-20
9.30E-17
7.10E-12
2.80E-11
5.00E-09
WP_016802981.1 22914 23769 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.30E-50
2.20E-36
1.30E-11
WP_016802980.1 23841 24735 + 297PF07859
PF10340
PF20434
PF00326
PF01738
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
DLH
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Dienelactone hydrolase family
9.40E-57
1.30E-11
3.10E-10
3.90E-06
1.60E-04
WP_016802979.1 24762 26433 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
1.00E-17
1.20E-09
2.60E-05
4.20E-05
WP_016802978.1 28695 26496 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.60E-75
5.00E-73
1.80E-08
WP_044425130.1 30227 28946 - 426PF03573OprDouter membrane porin, OprD family9.40E-105
WP_016803385.1 31605 30258 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
7.00E-48
3.70E-24
2.70E-09
WP_057066617.1 31978 33664 + 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
2.90E-77
3.50E-06
3.40E-05
WP_080779847.1 33689 34643 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 15.20E-67
WP_016803274.1 34655 35843 + 395PF03573OprDouter membrane porin, OprD family3.30E-36
WP_016803273.1 36076 37153 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
1.40E-54
9.40E-19
1.30E-05
WP_016803272.1 37165 38110 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
1.30E-12
7.40E-06
WP_005802836.1 38846 38153 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
1.00E-10

Results for WP_011792498.1 [Desulfovibrio desulfuricans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_223294582.1 95089 96046 + 318PF01694RhomboidRhomboid family5.80E-17
WP_010938510.1 98625 96432 - 730PF13231
PF02366
PMT_2
PMT
Dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-protein mannosyltransferase
5.60E-14
4.30E-06
WP_011792502.1 99236 98621 - 204PF01569
PF14378
PAP2
PAP2_3
PAP2 superfamily
PAP2 superfamily
5.50E-20
5.30E-04
WP_011792501.1 99913 101323 + 469PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
5.50E-45
2.10E-07
WP_011792500.1 101953 101653 - 99PF01910Thiamine_BPThiamine-binding protein1.70E-28
WP_010938515.1 104202 102006 - 731NO PFAM MATCH---
WP_010938516.1 104368 105193 + 274PF00881
PF00037
PF13187
PF12837
PF13237
Nitroreductase
Fer4
Fer4_9
Fer4_6
Fer4_10
Nitroreductase family
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
2.00E-32
4.50E-07
7.40E-07
7.10E-06
7.80E-06
WP_011792499.1 105415 105943 + 175NO PFAM MATCH---
WP_011792498.1 107869 106111 - 585PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-47
WP_011792497.1 108399 109248 + 282PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.10E-41
WP_011792496.1 110188 109735 - 150NO PFAM MATCH---
WP_010938524.1 111029 110510 - 172PF08534
PF00578
Redoxin
AhpC-TSA
Redoxin
AhpC/TSA family
3.90E-21
1.20E-20
WP_011792495.1 111331 112540 + 402PF00909Ammonium_transpAmmonium Transporter Family1.20E-126
WP_010938528.1 112662 113001 + 112PF00543P-IINitrogen regulatory protein P-II7.60E-46
WP_011792493.1 113056 115777 + 906PF08335
PF01966
PF01842
GlnD_UR_UTase
HD
ACT
GlnD PII-uridylyltransferase
HD domain
ACT domain
8.60E-28
1.20E-09
2.70E-06
WP_011792492.1 115835 116579 + 247PF01925TauESulfite exporter TauE/SafE1.60E-30
WP_043629436.1 116963 117584 + 206NO PFAM MATCH---

Results for WP_011791995.1 [Desulfovibrio desulfuricans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011791990.1 138305 138035 - 89PF08765MorMor transcription activator family2.70E-07
WP_011791991.1 138679 139726 + 348PF03193
PF00009
PF01926
PF02421
PF00005
RsgA_GTPase
GTP_EFTU
MMR_HSR1
FeoB_N
ABC_tran
RsgA GTPase
Elongation factor Tu GTP binding domain
50S ribosome-binding GTPase
Ferrous iron transport protein B
ABC transporter
5.80E-40
7.50E-06
7.50E-06
8.60E-06
3.10E-05
WP_043629310.1 139797 140304 + 168PF00583
PF13527
PF13508
Acetyltransf_1
Acetyltransf_9
Acetyltransf_7
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.50E-08
4.10E-07
3.50E-06
WP_010939491.1 141102 140838 - 87PF01176eIF-1aTranslation initiation factor 1A / IF-11.10E-24
WP_010939490.1 141451 141181 - 89PF00076
PF16842
RRM_1
RRM_occluded
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Occluded RNA-recognition motif
3.10E-21
1.90E-04
WP_141291659.1 142557 141855 - 233PF00565SNaseStaphylococcal nuclease homologue8.20E-07
WP_010939487.1 143264 142901 - 120PF02391MoaEMoaE protein3.10E-07
WP_223294662.1 143348 145913 + 854PF07719
PF13432
PF13424
TPR_2
TPR_16
TPR_12
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
8.00E-08
8.70E-05
2.30E-04
WP_011791995.1 147787 146059 - 575PF02624
PF00515
PF07719
PF13181
PF13424
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.80E-60
7.00E-14
1.00E-12
8.70E-11
3.50E-08
WP_010939484.1 148506 147783 - 240PF10294
PF05175
PF13649
PF13847
PF06325
Methyltransf_16
MTS
Methyltransf_25
Methyltransf_31
PrmA
Lysine methyltransferase
Methyltransferase small domain
Methyltransferase domain
Methyltransferase domain
Ribosomal protein L11 methyltransferase (PrmA)
2.00E-16
2.80E-10
1.20E-08
1.50E-08
6.20E-08
WP_258312783.1 149218 149464 + 81PF08348PAS_6YheO-like PAS domain6.00E-20
WP_258312784.1 149438 149876 + 145PF13309
PF08348
PF13551
HTH_22
PAS_6
HTH_29
HTH domain
YheO-like PAS domain
Winged helix-turn helix
8.50E-23
1.60E-10
9.00E-04
WP_141291661.1 151462 150181 - 426PF03222Trp_Tyr_permTryptophan/tyrosine permease family6.80E-140
WP_010939479.1 153021 151632 - 462PF01212
PF00155
Beta_elim_lyase
Aminotran_1_2
Beta-eliminating lyase
Aminotransferase class I and II
1.10E-96
3.30E-06
WP_011791997.1 153505 153130 - 124PF01042Ribonuc_L-PSPEndoribonuclease L-PSP2.80E-41
WP_011791998.1 153829 155347 + 505PF00497
PF01464
SBP_bac_3
SLT
Bacterial extracellular solute-binding proteins, family 3
Transglycosylase SLT domain
2.60E-28
1.30E-13
WP_010939476.1 156815 155657 - 385PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
3.80E-85
9.30E-09

Results for WP_033539685.1 [Shewanella marisflavi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_033539691.1 879696 879447 - 82PF11730DUF3297Protein of unknown function (DUF3297)6.10E-36
WP_033539690.1 879862 880249 + 128PF12614RRF_GIRibosome recycling factor2.60E-54
WP_033539689.1 881270 880328 - 313PF13620CarboxypepD_regCarboxypeptidase regulatory-like domain7.00E-04
WP_033539688.1 882981 881262 - 572NO PFAM MATCH---
WP_033539687.1 883321 883891 + 189PF02586SRAPSOS response associated peptidase (SRAP)3.20E-28
WP_235363928.1 884781 883887 - 297PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.50E-28
WP_033539686.1 884975 885233 + 85NO PFAM MATCH---
WP_235363927.1 885485 887072 + 528PF00990
PF02743
GGDEF
dCache_1
Diguanylate cyclase, GGDEF domain
Cache domain
2.30E-37
3.30E-08
WP_033539685.1 887256 889443 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.60E-72
4.90E-71
2.20E-09
WP_235363926.1 894634 889555 - 1692PF00082
PF02225
PF05922
PF18911
PF17963
Peptidase_S8
PA
Inhibitor_I9
PKD_4
Big_9
Subtilase family
PA domain
Peptidase inhibitor I9
PKD domain
Bacterial Ig domain
1.20E-43
1.60E-04
3.10E-04
3.50E-04
4.80E-04
WP_235363925.1 896205 895464 - 246PF13743
PF01323
Thioredoxin_5
DSBA
Thioredoxin
DSBA-like thioredoxin domain
4.60E-17
1.30E-11
WP_033539751.1 896579 896825 + 81NO PFAM MATCH---
WP_033539683.1 899066 896990 - 691PF05649
PF01431
Peptidase_M13_N
Peptidase_M13
Peptidase family M13
Peptidase family M13
7.70E-94
5.10E-64
WP_033539682.1 899384 899855 + 156PF06172Cupin_5Cupin superfamily (DUF985)4.20E-44
WP_033539681.1 900189 899889 - 99PF08895DUF1840Domain of unknown function (DUF1840)7.40E-31
WP_033539680.1 901607 900506 - 366PF00990
PF17853
GGDEF
GGDEF_2
Diguanylate cyclase, GGDEF domain
GGDEF-like domain
9.30E-49
2.60E-04
WP_033539679.1 902146 902827 + 226PF01891CbiMCobalt uptake substrate-specific transmembrane region1.70E-10

Results for WP_023227167.1 back to top

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Couldn't process WP_023227167.1 Genbank filestream. May be corrupt.

Results for WP_001984386.1 [Bacillus thuringiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001195383.1 3736344 3736074 - 89NO PFAM MATCH---
WP_001036561.1 3736722 3736362 - 119NO PFAM MATCH---
WP_001178298.1 3737039 3736856 - 60PF13121DUF3976Domain of unknown function (DUF3976)4.60E-29
WP_001109889.1 3737445 3737067 - 125NO PFAM MATCH---
WP_000428510.1 3737657 3737447 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_000197127.1 3738482 3741350 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.10E-55
5.20E-37
WP_000569912.1 3741483 3742740 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
4.20E-13
1.70E-04
WP_042511598.1 3742864 3744784 + 639NO PFAM MATCH---
WP_001984386.1 3744780 3746730 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-82
WP_042511599.1 3746746 3748288 + 513PF00881NitroreductaseNitroreductase family8.80E-13
WP_000996788.1 3748729 3748318 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.30E-54
WP_042511600.1 3749365 3748873 - 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
9.50E-10
2.80E-06
5.30E-04
WP_042511601.1 3750801 3749466 - 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
2.40E-63
5.80E-20
3.90E-17
3.30E-15
1.90E-10
WP_000332408.1 3750998 3751430 + 143NO PFAM MATCH---
WP_017672808.1 3751534 3751701 + 55INFERRED GENE---
WP_000649874.1 3752563 3751777 - 261PF12773
PF13240
DZR
zinc_ribbon_2
Double zinc ribbon
zinc-ribbon domain
2.70E-04
2.90E-04
WP_000424518.1 3752760 3753594 + 277PF11667DUF3267Putative zincin peptidase5.40E-04

Results for WP_074688968.1 [Pseudomonas sp. LAIL14HWK12:I2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007951487.1 306619 307486 + 288PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.80E-14
WP_007951486.1 307495 308296 + 266PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.20E-09
WP_039767461.1 308306 308579 + 90PF09928DUF2160Predicted small integral membrane protein (DUF2160)6.10E-37
WP_064380728.1 308626 310369 + 580NO PFAM MATCH---
WP_039767456.1 310802 310424 - 125PF01850PINPIN domain1.50E-16
WP_074688974.1 311230 310798 - 143PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system1.20E-11
WP_039767453.1 312267 311388 - 292PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
1.90E-18
1.10E-08
1.10E-06
WP_074688970.1 313214 312263 - 316PF13649
PF13847
PF08241
PF08242
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.10E-09
3.90E-06
9.60E-06
6.50E-04
WP_074688968.1 314434 313210 - 407PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-29
WP_256574470.1 314613 314484 - 42NO PFAM MATCH---
WP_074688966.1 316395 314985 - 469PF02518
PF00512
PF00672
PF14501
HATPase_c
HisKA
HAMP
HATPase_c_5
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
HAMP domain
GHKL domain
1.10E-21
2.50E-11
8.20E-10
6.20E-05
WP_007951475.1 317066 316391 - 224PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
5.00E-28
7.70E-27
WP_074688964.1 317473 318721 + 415PF02321OEPOuter membrane efflux protein1.70E-52
WP_074688961.1 318770 319964 + 397PF16576
PF13437
PF13533
PF00364
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Biotin-requiring enzyme
1.20E-42
4.50E-24
1.90E-07
3.40E-04
WP_074688959.1 319979 323132 + 1050PF00873ACR_tranAcrB/AcrD/AcrF family0.00E+00
WP_039767439.1 323266 323467 + 66NO PFAM MATCH---
WP_039767437.1 323546 323879 + 110PF10976DUF2790Protein of unknown function (DUF2790)4.90E-26

Results for WP_035911697.1 [Frankia sp. B2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_240724117.1 418 0 - 139PF13546DDE_5DDE superfamily endonuclease4.80E-30
WP_011438583.1 1327 736 - 196PF01814HemerythrinHemerythrin HHE cation binding domain1.40E-09
WP_134351106.1 3059 4463 + 467PF19307
PF00027
PCLP
cNMP_binding
Phage capsid-like protein
Cyclic nucleotide-binding domain
3.50E-136
6.20E-16
WP_134351108.1 4782 7065 + 760PF19086Terpene_syn_C_2Terpene synthase family 2, C-terminal metal binding1.40E-86
WP_134351110.1 7818 7065 - 250PF00881NitroreductaseNitroreductase family5.70E-34
WP_035911697.1 9186 7848 - 445PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-48
WP_011438589.1 10596 9195 - 466PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.50E-52
WP_011438590.1 12206 10592 - 537PF02129
PF08530
PF00561
PF00326
PF12146
Peptidase_S15
PepX_C
Abhydrolase_1
Peptidase_S9
Hydrolase_4
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
alpha/beta hydrolase fold
Prolyl oligopeptidase family
Serine aminopeptidase, S33
2.30E-40
3.10E-20
7.60E-05
9.20E-05
2.10E-04
WP_011438591.1 13026 12216 - 269NO PFAM MATCH---
WP_023840694.1 13431 13317 - 37NO PFAM MATCH---
WP_083282201.1 14871 13542 - 442PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
4.60E-20
2.10E-18
WP_011438594.1 15929 14927 - 333PF01497Peripla_BP_2Periplasmic binding protein1.00E-24
WP_011438595.1 16819 15961 - 285PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.00E-29
4.10E-10
6.40E-05
3.60E-04
WP_011438596.1 17961 16815 - 381PF01032FecCDFecCD transport family7.80E-94

Results for WP_017560877.1 [Bacillus sp. UTDS19-33BHI26] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017560880.1 360347 359513 - 277PF11667DUF3267Putative zincin peptidase8.20E-04
WP_017560879.1 360696 361470 + 257PF12773
PF13240
PF13248
DZR
zinc_ribbon_2
zf-ribbon_3
Double zinc ribbon
zinc-ribbon domain
zinc-ribbon domain
6.40E-06
7.80E-06
4.90E-04
WP_017672808.1 361546 361773 + 75INFERRED GENE---
WP_000332390.1 362248 361816 - 143NO PFAM MATCH---
WP_001110220.1 362445 363780 + 445INFERRED GENE---
WP_017560878.1 363882 364374 + 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.30E-10
6.30E-07
5.30E-05
WP_000996787.1 364518 364929 + 136PF13048DUF3908Protein of unknown function (DUF3908)4.10E-54
WP_001984439.1 366501 364959 - 513PF00881NitroreductaseNitroreductase family7.70E-13
WP_017560877.1 368467 366517 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-82
WP_017560876.1 370383 368463 - 639NO PFAM MATCH---
WP_000569912.1 371764 370507 - 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
4.20E-13
1.70E-04
WP_017560875.1 374767 371899 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
2.10E-54
5.10E-37
WP_000428510.1 375592 375802 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_001109889.1 375804 376182 + 125NO PFAM MATCH---
WP_001178301.1 376210 376393 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_017560874.1 376527 376884 + 118NO PFAM MATCH---
WP_017560873.1 376902 377172 + 89NO PFAM MATCH---

Results for WP_065878960.1 [Pseudomonas sp. A-RE-26] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017528469.1 143467 145705 + 745PF02922
PF02806
PF00128
CBM_48
Alpha-amylase_C
Alpha-amylase
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha amylase, C-terminal all-beta domain
Alpha amylase, catalytic domain
1.60E-25
4.90E-23
8.90E-12
WP_017528468.1 145756 146923 + 388PF00990GGDEFDiguanylate cyclase, GGDEF domain3.70E-46
WP_135196797.1 149118 146931 - 728PF00072
PF02518
PF01590
PF13185
PF00512
Response_reg
HATPase_c
GAF
GAF_2
HisKA
Response regulator receiver domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GAF domain
GAF domain
His Kinase A (phospho-acceptor) domain
1.80E-16
4.80E-15
7.30E-15
8.50E-14
8.40E-08
WP_135196796.1 150136 149284 - 283PF00188CAPCysteine-rich secretory protein family8.70E-20
WP_217855068.1 151432 150217 - 404PF07690
PF06609
PF12832
PF03137
MFS_1
TRI12
MFS_1_like
OATP
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
MFS_1 like family
Organic Anion Transporter Polypeptide (OATP) family
1.50E-55
2.90E-04
3.20E-04
6.90E-04
WP_017528465.1 151545 152427 + 293PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.90E-23
2.20E-15
WP_017528464.1 152482 153160 + 225PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
8.40E-06
8.80E-05
9.00E-04
WP_017528463.1 154766 153200 - 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
5.40E-49
4.10E-13
5.90E-09
1.10E-08
7.10E-05
WP_065878960.1 154928 157130 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-72
8.00E-71
3.70E-08
WP_017528461.1 158052 157197 - 284PF00701DHDPSDihydrodipicolinate synthetase family2.90E-53
WP_017528459.1 158832 158334 - 165PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase9.80E-48
WP_263290836.1 159080 159947 + 288PF06445
PF12833
PF14526
PF00165
GyrI-like
HTH_18
Cass2
HTH_AraC
GyrI-like small molecule binding domain
Helix-turn-helix domain
Integron-associated effector binding protein
Bacterial regulatory helix-turn-helix proteins, AraC family
3.70E-31
8.50E-20
1.10E-13
1.20E-12
WP_241665010.1 160035 160347 + 103NO PFAM MATCH---
WP_065878964.1 161747 160409 - 445PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
2.90E-33
4.00E-29
WP_032883464.1 162806 161834 - 323PF00892
PF10639
EamA
TMEM234
EamA-like transporter family
Putative transmembrane family 234
6.30E-16
7.50E-04
WP_068936573.1 164125 163393 - 243NO PFAM MATCH---
WP_017528451.1 164979 164250 - 242NO PFAM MATCH---

Results for WP_074979417.1 [Pseudomonas citronellolis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074986498.1 6777 6384 - 130PF04828GFAGlutathione-dependent formaldehyde-activating enzyme1.60E-16
WP_074986500.1 7005 8172 + 388PF00990GGDEFDiguanylate cyclase, GGDEF domain2.40E-36
WP_074986502.1 8743 9322 + 192PF04828GFAGlutathione-dependent formaldehyde-activating enzyme1.50E-09
WP_074986504.1 9420 11988 + 855PF00005
PF17755
PF00684
PF13555
PF02463
ABC_tran
UvrA_DNA-bind
DnaJ_CXXCXGXG
AAA_29
SMC_N
ABC transporter
UvrA DNA-binding domain
DnaJ central domain
P-loop containing region of AAA domain
RecF/RecN/SMC N terminal domain
1.40E-15
5.00E-14
1.10E-06
4.10E-06
2.00E-05
WP_074986506.1 13249 12037 - 403PF07690MFS_1Major Facilitator Superfamily6.00E-40
WP_074986508.1 15831 13515 - 771PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
1.30E-158
6.30E-127
WP_074979411.1 17781 17082 - 232PF04055
PF13353
Radical_SAM
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
2.10E-11
7.80E-07
CW310_RS02755 17777 20004 + 742INFERRED GENE---
WP_074979417.1 22946 20684 - 753PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.10E-75
2.50E-74
9.20E-09
WP_135499795.1 23841 23034 - 268PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 33.50E-26
WP_061561373.1 24234 24978 + 247PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
7.60E-48
1.60E-36
2.40E-06
6.30E-06
4.10E-04
WP_074979419.1 25081 25819 + 245PF08241
PF13649
PF13489
PF08242
PF13847
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.30E-21
6.50E-19
1.20E-16
7.10E-11
1.40E-09
WP_043266559.1 26224 25825 - 132PF04828GFAGlutathione-dependent formaldehyde-activating enzyme1.70E-18
WP_074979421.1 26531 26309 - 73PF11390FdsDNADH-dependant formate dehydrogenase delta subunit FdsD5.50E-25
WP_074979423.1 29407 26527 - 959PF00384
PF01568
PF13510
PF10588
PF04879
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
2Fe-2S iron-sulfur cluster binding domain
NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Molybdopterin oxidoreductase Fe4S4 domain
6.30E-75
1.10E-27
7.40E-23
6.40E-17
1.30E-15
WP_074979425.1 30966 29403 - 520PF01512
PF10589
Complex1_51K
NADH_4Fe-4S
Respiratory-chain NADH dehydrogenase 51 Kd subunit
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
2.00E-45
1.30E-27
WP_074979427.1 31442 30959 - 160PF012572Fe-2S_thioredxThioredoxin-like [2Fe-2S] ferredoxin5.50E-38

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003849343.1 [Pantoea sp. MT58] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_008925846.1 2706269 2705282 - 328PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase1.10E-119
WP_003849365.1 2708014 2706265 - 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
8.70E-59
1.10E-35
2.80E-09
1.30E-06
2.80E-04
WP_008925845.1 2710304 2708048 - 751PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.20E-50
4.20E-20
1.70E-07
WP_003849360.1 2710793 2710508 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_003849352.1 2712549 2710875 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-98
9.90E-13
3.20E-07
WP_008925844.1 2713344 2712657 - 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
7.20E-82
7.70E-07
2.80E-05
1.80E-04
9.20E-04
WP_003849347.1 2714831 2713544 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)6.90E-149
WP_003849345.1 2715998 2714912 - 361PF00266Aminotran_5Aminotransferase class-V2.30E-63
WP_003849343.1 2716311 2718075 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.10E-82
2.30E-66
WP_003849342.1 2718444 2719305 + 286PF01226Form_Nir_transFormate/nitrite transporter1.80E-72
WP_008925843.1 2719375 2721658 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-204
8.20E-44
WP_008925842.1 2721823 2722564 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-30
7.60E-17
7.10E-05
WP_003849339.1 2723767 2722615 - 383PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
7.60E-33
8.30E-11
1.40E-06
8.80E-04
WP_008925841.1 2725378 2724085 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.70E-37
1.60E-33
WP_003849336.1 2726814 2725470 - 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
9.20E-64
3.80E-24
4.30E-17
2.30E-14
2.60E-07
WP_003849334.1 2727433 2726821 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.00E-56
1.10E-05
WP_187961140.1 2731142 2727611 - 1176PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.60E-72
1.10E-43
5.70E-28
5.30E-27
4.50E-05

Results for WP_063168715.1 [Mesorhizobium sp. B2-8-7] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063168718.1 62869 62071 - 265PF00497
PF10613
SBP_bac_3
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Ligated ion channel L-glutamate- and glycine-binding site
2.60E-58
1.30E-04
WP_063170306.1 63708 62940 - 255PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
6.00E-35
2.90E-13
1.70E-07
FJ438_RS34850 63903 64905 + 334INFERRED GENE---
WP_063168717.1 66499 64972 - 508PF02913
PF01565
FAD-oxidase_C
FAD_binding_4
FAD linked oxidases, C-terminal domain
FAD binding domain
2.60E-38
2.10E-35
WP_082826519.1 67617 66495 - 373PF00155Aminotran_1_2Aminotransferase class I and II1.80E-38
WP_063168716.1 68787 67659 - 375PF00175
PF00111
PF00970
NAD_binding_1
Fer2
FAD_binding_6
Oxidoreductase NAD-binding domain
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase FAD-binding domain
1.20E-16
3.30E-08
5.60E-06
WP_013530418.1 69824 68783 - 346PF19112
PF00355
VanA_C
Rieske
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
6.00E-45
1.10E-17
WP_013530419.1 69946 70864 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.50E-22
1.10E-16
WP_063168715.1 72662 71264 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-42
WP_063168714.1 72826 74737 + 636PF13414TPR_11TPR repeat7.80E-05
WP_013530422.1 75174 74772 - 133NO PFAM MATCH---
WP_164755110.1 76755 75228 - 508PF03098An_peroxidaseAnimal haem peroxidase1.80E-09
WP_244514330.1 77908 77032 - 291PF00892EamAEamA-like transporter family8.50E-34
WP_013530425.1 78745 78046 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
6.10E-30
5.00E-12
WP_013530426.1 79554 78783 - 256NO PFAM MATCH---
WP_013530427.1 80379 80577 + 65NO PFAM MATCH---
WP_013530428.1 81241 80722 - 172PF05974DUF892Domain of unknown function (DUF892)8.10E-60

Results for WP_043327001.1 [Micromonospora sp. XM-20-01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_043326989.1 86253 86940 + 228PF00106
PF13561
PF01370
PF08659
PF16363
adh_short
adh_short_C2
Epimerase
KR
GDP_Man_Dehyd
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
NAD dependent epimerase/dehydratase family
KR domain
GDP-mannose 4,6 dehydratase
6.20E-36
3.50E-28
2.40E-09
2.30E-07
1.80E-05
WP_043326991.1 86968 87622 + 217PF03807
PF02826
PF03446
PF02737
F420_oxidored
2-Hacid_dh_C
NAD_binding_2
3HCDH_N
NADP oxidoreductase coenzyme F420-dependent
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD binding domain of 6-phosphogluconate dehydrogenase
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
4.30E-18
3.90E-05
1.00E-04
1.90E-04
WP_043326993.1 87829 87631 - 65NO PFAM MATCH---
WP_043326995.1 89409 88023 - 461PF01341
PF00553
Glyco_hydro_6
CBM_2
Glycosyl hydrolases family 6
Cellulose binding domain
1.50E-58
2.60E-18
WP_043326997.1 89562 90831 + 422PF13185
PF01590
PF08448
GAF_2
GAF
PAS_4
GAF domain
GAF domain
PAS fold
3.00E-16
8.00E-13
1.50E-08
WP_043326999.1 91904 90836 - 355PF11017DUF2855Protein of unknown function (DUF2855)1.10E-90
WP_084789551.1 94131 91998 - 710PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
3.80E-12
4.10E-07
WP_051611251.1 95539 94141 - 465PF07812TfuATfuA-like protein1.90E-45
WP_043327001.1 96698 95531 - 388PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-60
WP_043327003.1 97103 96728 - 124NO PFAM MATCH---
WP_124778775.1 97610 97247 - 120NO PFAM MATCH---
WP_158559965.1 97978 98725 + 248PF13411MerR_1MerR HTH family regulatory protein3.40E-14
WP_199744080.1 101765 98732 - 1010PF00005
PF00664
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
7.10E-31
6.30E-18
1.80E-05
6.80E-04
WP_051611255.1 103973 101789 - 727PF03412
PF00005
PF00664
Peptidase_C39
ABC_tran
ABC_membrane
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
2.00E-32
8.40E-29
3.20E-19
WP_043327011.1 104779 103969 - 269PF13437
PF16576
PF13533
PF00529
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
Cation efflux system protein CusB domain 1
8.00E-07
5.30E-05
1.60E-04
2.50E-04
WP_051611257.1 106281 104775 - 501PF00881NitroreductaseNitroreductase family8.00E-13
WP_140946145.1 108593 106316 - 758PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-93

Results for WP_018208094.1 back to top

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Couldn't process WP_018208094.1 Genbank filestream. May be corrupt.

Results for WP_011976340.1 back to top

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Couldn't process WP_011976340.1 Genbank filestream. May be corrupt.

Results for WP_015016859.1 [Streptococcus dysgalactiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046177190.1 1551 1947 + 131NO PFAM MATCH---
WP_046177189.1 2164 2530 + 121PF05973Gp49Phage derived protein Gp49-like (DUF891)1.10E-22
WP_027971722.1 2519 2816 + 98PF01381
PF13744
PF13560
PF13443
PF12844
HTH_3
HTH_37
HTH_31
HTH_26
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
Helix-turn-helix domain
1.60E-14
2.50E-08
3.20E-06
1.40E-04
7.90E-04
WP_046177188.1 2837 4043 + 401NO PFAM MATCH---
WP_165626014.1 4049 4217 + 55NO PFAM MATCH---
WP_012766767.1 5114 5276 + 53NO PFAM MATCH---
WP_003061458.1 5494 6445 + 316PF00881NitroreductaseNitroreductase family6.00E-14
WP_046177187.1 6441 7506 + 354NO PFAM MATCH---
WP_015016859.1 7518 8877 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.20E-43
WP_046177186.1 8851 9526 + 224PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like9.60E-11
WP_015016860.1 9522 10209 + 228PF19393DUF5968Family of unknown function (DUF5968)2.30E-21
WP_046177185.1 10229 11153 + 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
1.70E-33
1.40E-14
2.90E-04
WP_046177184.1 11161 12289 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.40E-25
5.30E-20
5.60E-11
WP_003057434.1 12285 13404 + 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
2.00E-41
6.40E-20
WP_153227912.1 13759 16585 + 941PF19580
PF03372
PF01336
PF18942
PF00746
Exo_endo_phos_3
Exo_endo_phos
tRNA_anti-codon
DUF5689
Gram_pos_anchor
Endonuclease/Exonuclease/phosphatase family
Endonuclease/Exonuclease/phosphatase family
OB-fold nucleic acid binding domain
Family of unknown function (DUF5689)
LPXTG cell wall anchor motif
1.40E-06
7.80E-06
2.30E-05
5.90E-05
1.50E-04
WP_003050124.1 16915 17419 + 167PF06177QueTQueT transporter3.20E-33
WP_046177182.1 17565 19524 + 652PF01653
PF03120
PF12826
PF00533
PF14520
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
NAD-dependent DNA ligase adenylation domain
NAD-dependent DNA ligase OB-fold domain
Helix-hairpin-helix motif
BRCA1 C Terminus (BRCT) domain
Helix-hairpin-helix domain
2.90E-115
3.80E-35
1.40E-16
4.60E-14
1.80E-09

Results for WP_034014199.1 back to top

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Couldn't process WP_034014199.1 Genbank filestream. May be corrupt.

Results for WP_074950574.1 [Myxococcus fulvus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_046715575.1 152567 153176 + 202PF13036LpoBPeptidoglycan-synthase activator LpoB3.30E-44
WP_143097005.1 153222 154476 + 417NO PFAM MATCH---
WP_046715574.1 154507 155281 + 257PF02535ZipZIP Zinc transporter1.90E-35
WP_074950582.1 155726 155342 - 127PF00072Response_regResponse regulator receiver domain2.60E-20
WP_074950581.1 156028 156466 + 145PF00571CBSCBS domain2.80E-28
WP_052771222.1 156485 157562 + 358PF03706LPG_synthase_TMLysylphosphatidylglycerol synthase TM region7.50E-40
WP_074950578.1 157637 158492 + 284PF13649
PF13489
PF08241
PF13847
PF08242
Methyltransf_25
Methyltransf_23
Methyltransf_11
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.40E-11
7.00E-11
1.90E-09
9.60E-09
1.40E-08
WP_074950576.1 159933 158580 - 450PF07812TfuATfuA-like protein1.10E-48
WP_074950574.1 161189 159929 - 419PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.00E-80
WP_074950572.1 161830 161188 - 213NO PFAM MATCH---
WP_074950570.1 165361 161902 - 1152PF00069
PF07714
PF13191
PF13424
PF03109
Pkinase
PK_Tyr_Ser-Thr
AAA_16
TPR_12
ABC1
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
Tetratricopeptide repeat
ABC1 atypical kinase-like domain
3.80E-42
5.00E-22
1.50E-21
3.70E-05
6.20E-04
WP_083559716.1 165691 167416 + 574PF00158
PF14532
PF07728
PF07724
PF00004
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
AAA
Sigma-54 interaction domain
Sigma-54 interaction domain
AAA domain (dynein-related subfamily)
AAA domain (Cdc48 subfamily)
ATPase family associated with various cellular activities (AAA)
1.70E-49
1.20E-15
6.70E-07
4.20E-04
9.40E-04
WP_046715565.1 167503 168307 + 267PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
2.90E-56
2.60E-48
3.90E-12
WP_046715564.1 169089 168276 - 270PF01126Heme_oxygenaseHeme oxygenase2.20E-25
WP_082165382.1 169340 169085 - 84NO PFAM MATCH---
WP_074950566.1 170400 169719 - 226PF14345GDYXXLXYGDYXXLXY protein3.80E-33
WP_046715563.1 171497 170399 - 365PF14351DUF4401Domain of unknown function (DUF4401)1.70E-53

Results for WP_074957200.1 [Myxococcus fulvus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074957204.1 413330 411428 - 633PF03169OPTOPT oligopeptide transporter protein5.90E-98
WP_046712672.1 413942 413456 - 161PF00254FKBP_CFKBP-type peptidyl-prolyl cis-trans isomerase1.50E-13
WP_046712671.1 415286 414008 - 425PF00375SDFSodium:dicarboxylate symporter family6.30E-121
WP_074957203.1 415391 416030 + 212PF136402OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamily5.20E-06
WP_074957392.1 416959 416176 - 260PF01555N6_N4_MtaseDNA methylase1.00E-14
WP_245772499.1 417917 417014 - 300PF09544DUF2381Protein of unknown function (DUF2381)9.00E-45
WP_074957202.1 419922 417927 - 664PF00069
PF07714
PF01636
Pkinase
PK_Tyr_Ser-Thr
APH
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Phosphotransferase enzyme family
2.40E-19
4.10E-09
8.50E-04
WP_074957201.1 421530 420372 - 385PF07812TfuATfuA-like protein2.60E-44
WP_074957200.1 422636 421526 - 369PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-55
WP_046712665.1 422881 423358 + 158PF00578
PF08534
AhpC-TSA
Redoxin
AhpC/TSA family
Redoxin
1.30E-30
1.30E-16
WP_082165128.1 423938 423359 - 192PF09536DUF2378Protein of unknown function (DUF2378)1.80E-04
WP_074957199.1 424113 424749 + 211PF04542
PF08281
PF04545
PF00196
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
Sigma-70 region 2
Sigma-70, region 4
Sigma-70, region 4
Bacterial regulatory proteins, luxR family
3.20E-15
3.60E-11
4.70E-09
3.10E-05
WP_074957198.1 424748 425282 + 177PF13490zf-HC2Putative zinc-finger9.30E-04
WP_074957197.1 425278 425797 + 172PF13801Metal_resistHeavy-metal resistance6.20E-04
WP_074957196.1 425915 426497 + 193PF13590DUF4136Domain of unknown function (DUF4136)1.40E-28
WP_012235908.1 426856 427042 + 62INFERRED GENE---
WP_074957194.1 428847 427845 - 333PF19459DUF5996Family of unknown function (DUF5996)2.60E-126

Results for WP_074959357.1 [Myxococcus fulvus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074959364.1 22769 23414 + 214NO PFAM MATCH---
WP_074959363.1 23482 23758 + 91NO PFAM MATCH---
WP_074959362.1 23973 25404 + 476PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
4.00E-60
8.10E-06
WP_074959361.1 25604 26831 + 408PF07994
PF01658
NAD_binding_5
Inos-1-P_synth
Myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase
5.30E-63
5.10E-31
WP_074959360.1 26838 27771 + 310NO PFAM MATCH---
WP_074959378.1 27767 28967 + 399PF08241
PF13649
PF13489
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
2.60E-09
3.00E-06
7.10E-05
WP_074959359.1 28968 30003 + 344PF01408
PF02894
GFO_IDH_MocA
GFO_IDH_MocA_C
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
6.80E-24
1.20E-14
WP_074959358.1 29993 30827 + 277NO PFAM MATCH---
WP_074959357.1 30823 32299 + 491PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-67
WP_074959356.1 32302 33169 + 288PF01261AP_endonuc_2Xylose isomerase-like TIM barrel1.10E-36
WP_218035703.1 33165 34452 + 428PF00534
PF13692
PF13579
PF13439
PF13524
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_transf_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyltransferase Family 4
Glycosyl transferases group 1
2.70E-30
5.00E-29
3.30E-15
4.70E-14
3.80E-12
WP_074959355.1 34448 35222 + 257PF02585PIG-LGlcNAc-PI de-N-acetylase4.40E-16
WP_245772702.1 36122 35243 - 292PF13460
PF01370
PF04321
PF16363
PF05368
NAD_binding_10
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
NmrA
NAD(P)H-binding
NAD dependent epimerase/dehydratase family
RmlD substrate binding domain
GDP-mannose 4,6 dehydratase
NmrA-like family
1.00E-28
7.80E-28
5.60E-23
3.90E-18
2.70E-17
WP_074959353.1 36169 36952 + 260PF12833
PF00165
PF13542
HTH_18
HTH_AraC
HTH_Tnp_ISL3
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain of transposase family ISL3
6.30E-19
2.30E-14
8.20E-04
WP_074959352.1 37891 37063 - 275PF17765
PF13560
PF01381
MLTR_LBD
HTH_31
HTH_3
MmyB-like transcription regulator ligand binding domain
Helix-turn-helix domain
Helix-turn-helix
9.50E-48
6.30E-20
6.10E-05
WP_074959351.1 37992 38871 + 292PF01370
PF13460
PF05368
PF01073
PF04321
Epimerase
NAD_binding_10
NmrA
3Beta_HSD
RmlD_sub_bind
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
NmrA-like family
3-beta hydroxysteroid dehydrogenase/isomerase family
RmlD substrate binding domain
1.90E-15
4.20E-12
7.00E-09
3.60E-06
1.40E-05
WP_074959350.1 41724 38919 - 934PF17963
PF17892
PF17803
PF13540
PF00415
Big_9
Cadherin_5
Cadherin_4
RCC1_2
RCC1
Bacterial Ig domain
Cadherin-like domain
Bacterial cadherin-like domain
Regulator of chromosome condensation (RCC1) repeat
Regulator of chromosome condensation (RCC1) repeat
8.10E-93
2.90E-80
2.60E-57
4.70E-55
1.30E-30

Results for WP_074959403.1 [Myxococcus fulvus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074959410.1 23361 22215 - 381PF06441
PF00561
EHN
Abhydrolase_1
Epoxide hydrolase N terminus
alpha/beta hydrolase fold
1.20E-28
3.30E-07
WP_074959409.1 24911 23486 - 474PF07586HXXSHHProtein of unknown function (DUF1552)2.40E-47
WP_074959408.1 26431 24907 - 507PF07631
PF07627
PF07637
PF07626
PF07624
PSD4
PSCyt3
PSD5
PSD3
PSD2
Protein of unknown function (DUF1592)
Protein of unknown function (DUF1588)
Protein of unknown function (DUF1595)
Protein of unknown function (DUF1587)
Protein of unknown function (DUF1585)
2.90E-38
1.60E-28
2.60E-20
4.20E-14
9.90E-13
WP_074959407.1 28231 26857 - 457NO PFAM MATCH---
WP_074959406.1 28871 30008 + 378NO PFAM MATCH---
WP_245772706.1 31876 30073 - 600PF00158
PF14532
PF07728
PF00004
PF07724
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
AAA_2
Sigma-54 interaction domain
Sigma-54 interaction domain
AAA domain (dynein-related subfamily)
ATPase family associated with various cellular activities (AAA)
AAA domain (Cdc48 subfamily)
3.50E-50
3.40E-15
2.90E-09
1.30E-05
3.10E-05
WP_245772705.1 31997 35435 + 1145PF00069
PF07714
PF13191
PF03109
PF13424
Pkinase
PK_Tyr_Ser-Thr
AAA_16
ABC1
TPR_12
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
ABC1 atypical kinase-like domain
Tetratricopeptide repeat
8.60E-44
1.50E-25
3.10E-24
1.30E-04
3.50E-04
WP_074959404.1 35447 36815 + 455NO PFAM MATCH---
WP_074959403.1 36811 38029 + 405PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.20E-73
WP_074959402.1 38025 39360 + 444PF07812TfuATfuA-like protein1.60E-48
WP_074959401.1 39558 40536 + 325NO PFAM MATCH---
WP_074959400.1 41090 40625 - 154PF03446NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenase7.40E-04
WP_170300574.1 41543 42149 + 201PF14417MEDSMEDS: MEthanogen/methylotroph, DcmR Sensory domain7.00E-47
WP_245772704.1 42196 43417 + 406PF02518
PF00512
PF13581
HATPase_c
HisKA
HATPase_c_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
Histidine kinase-like ATPase domain
4.50E-26
3.90E-10
1.30E-04
WP_012098485.1 43641 43740 + 33INFERRED GENE---
WP_074959397.1 43929 45354 + 474PF00400
PF12894
WD40
ANAPC4_WD40
WD domain, G-beta repeat
Anaphase-promoting complex subunit 4 WD40 domain
1.60E-10
4.60E-04
WP_074959396.1 45490 46045 + 184PF01872RibD_CRibD C-terminal domain4.60E-17

Results for WP_044426978.1 [Skermanella aerolata] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_052830888.1 151813 149920 - 630PF13632
PF00535
PF13506
Glyco_trans_2_3
Glycos_transf_2
Glyco_transf_21
Glycosyl transferase family group 2
Glycosyl transferase family 2
Glycosyl transferase family 21
4.10E-11
7.80E-08
3.90E-06
WP_044427419.1 152005 153466 + 486PF04349MdoGPeriplasmic glucan biosynthesis protein, MdoG6.90E-175
WP_211099231.1 153968 153434 - 177PF03167UDGUracil DNA glycosylase superfamily1.30E-11
WP_044426969.1 154337 155576 + 412PF07994
PF01658
NAD_binding_5
Inos-1-P_synth
Myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase
1.50E-56
9.30E-33
WP_044426971.1 155565 156462 + 298PF13023HD_3HD domain7.30E-07
WP_044426973.1 156458 157601 + 380PF13649Methyltransf_25Methyltransferase domain6.40E-04
WP_044426974.1 157600 158572 + 323PF01408
PF02894
GFO_IDH_MocA
GFO_IDH_MocA_C
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
5.60E-24
1.50E-13
WP_044426976.1 158562 159396 + 277PF00753Lactamase_BMetallo-beta-lactamase superfamily3.80E-04
WP_044426978.1 159392 160844 + 483PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.20E-61
WP_044426980.1 160879 161767 + 295PF01261AP_endonuc_2Xylose isomerase-like TIM barrel3.90E-39
WP_044426982.1 161771 163043 + 423PF00534
PF13692
PF13579
PF13439
PF13524
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_transf_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyltransferase Family 4
Glycosyl transferases group 1
1.80E-33
3.80E-29
1.70E-17
3.70E-16
1.50E-09
WP_211099232.1 163063 163849 + 261PF02585PIG-LGlcNAc-PI de-N-acetylase8.00E-14
WP_052830889.1 164144 163835 - 102NO PFAM MATCH---
WP_044426987.1 164266 164671 + 134PF00072Response_regResponse regulator receiver domain5.90E-06
WP_044426989.1 165902 164672 - 409PF07690
PF00083
PF13347
MFS_1
Sugar_tr
MFS_2
Major Facilitator Superfamily
Sugar (and other) transporter
MFS/sugar transport protein
5.00E-43
9.50E-13
3.50E-07
WP_147040222.1 166004 166631 + 208PF03458Gly_transporterGlycine transporter8.90E-42
WP_044426994.1 166701 167286 + 194PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
6.80E-40
8.90E-09

Results for WP_048819674.1 [Streptomyces ipomoeae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_009298711.1 54415 53812 - 200PF01725Ham1p_likeHam1 family3.90E-62
WP_141575181.1 54927 54528 - 132PF07361
PF09731
PF12795
PF07889
PF06810
Cytochrom_B562
Mitofilin
MscS_porin
DUF1664
Phage_GP20
Cytochrome b562
Mitochondrial inner membrane protein
Mechanosensitive ion channel porin domain
Protein of unknown function (DUF1664)
Phage minor structural protein GP20
1.00E-05
3.00E-05
9.00E-05
1.50E-04
3.90E-04
WP_009298736.1 55839 55101 - 245PF01138
PF03725
RNase_PH
RNase_PH_C
3' exoribonuclease family, domain 1
3' exoribonuclease family, domain 2
8.30E-25
4.70E-10
WP_009298733.1 56148 55914 - 77PF00367PTS_EIIBphosphotransferase system, EIIB8.70E-14
WP_141595818.1 57561 56253 - 435PF07690
PF05977
PF00083
MFS_1
MFS_3
Sugar_tr
Major Facilitator Superfamily
Transmembrane secretion effector
Sugar (and other) transporter
3.70E-26
5.80E-13
3.70E-07
WP_258544001.1 58493 57626 - 288PF04072LCMLeucine carboxyl methyltransferase5.50E-19
WP_100243841.1 58974 60864 + 629PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
2.90E-08
1.10E-04
WP_009298735.1 60985 61120 + 44NO PFAM MATCH---
WP_048819674.1 61197 62361 + 387PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-09
WP_258544002.1 62266 63652 + 461PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-35
WP_234022122.1 63663 65652 + 662PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
7.20E-08
1.50E-04
WP_141595819.1 65620 66481 + 286PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
7.90E-13
3.70E-10
5.00E-07
WP_141586016.1 66477 67932 + 484PF07969
PF01979
Amidohydro_3
Amidohydro_1
Amidohydrolase family
Amidohydrolase family
3.60E-07
2.00E-06
WP_258539992.1 67921 69196 + 424PF00067p450Cytochrome P4506.60E-13
WP_181800394.1 69284 71198 + 637PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.10E-08
1.00E-04
WP_100243843.1 71359 71974 + 204PF09860DUF2087Uncharacterized protein conserved in bacteria (DUF2087)3.20E-21
WP_141574956.1 71979 73458 + 492PF00883
PF02789
Peptidase_M17
Peptidase_M17_N
Cytosol aminopeptidase family, catalytic domain
Cytosol aminopeptidase family, N-terminal domain
1.60E-100
2.10E-15

Results for WP_063364670.1 [Pseudoalteromonas luteoviolacea DSM 6061] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063364666.1 561340 560890 - 149PF00583
PF13673
PF13508
PF17013
PF13420
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_15
Acetyltransf_4
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Putative acetyl-transferase
Acetyltransferase (GNAT) domain
7.70E-12
3.10E-09
5.10E-09
3.00E-07
8.30E-05
WP_063364667.1 561819 561381 - 145NO PFAM MATCH---
WP_063359071.1 562450 561811 - 212PF00132
PF14602
Hexapep
Hexapep_2
Bacterial transferase hexapeptide (six repeats)
Hexapeptide repeat of succinyl-transferase
1.10E-10
3.10E-04
WP_063364668.1 563002 562465 - 178PF01885PTS_2-RNARNA 2'-phosphotransferase, Tpt1 / KptA family6.00E-41
WP_063359073.1 563385 563094 - 96NO PFAM MATCH---
WP_063359074.1 564363 563472 - 296PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.00E-21
9.30E-16
WP_063359075.1 565467 564414 - 350PF17676
PF02016
Peptidase_S66C
Peptidase_S66
LD-carboxypeptidase C-terminal domain
LD-carboxypeptidase N-terminal domain
8.10E-28
5.20E-27
WP_063364669.1 565818 566124 + 101NO PFAM MATCH---
WP_063364670.1 568417 566233 - 727PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
4.60E-73
7.70E-73
6.30E-09
WP_063359078.1 569121 568602 - 172PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
5.60E-28
3.90E-05
WP_063359079.1 569388 569169 - 72PF20110DUF6500Family of unknown function (DUF6500)4.70E-29
WP_063359080.1 569772 569574 - 65PF01361
PF14552
Tautomerase
Tautomerase_2
Tautomerase enzyme
Tautomerase enzyme
3.60E-20
2.70E-06
WP_063359081.1 570150 569784 - 121PF12893
PF13577
Lumazine_bd_2
SnoaL_4
Putative lumazine-binding
SnoaL-like domain
8.90E-23
2.70E-04
WP_063359082.1 570780 570165 - 204PF02798
PF13417
GST_N
GST_N_3
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
1.90E-06
2.80E-06
WP_063364671.1 570932 571814 + 293PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.80E-30
6.60E-18
WP_063364677.1 572718 571818 - 299PF00165
PF12833
HTH_AraC
HTH_18
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain
4.40E-18
1.30E-16
WP_063364672.1 575892 572799 - 1030PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
1.40E-147
7.60E-13
4.80E-08

Results for WP_055705670.1 [Streptomyces puniciscabiei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244329078.1 78475 77341 - 377PF00201
PF04101
UDPGT
Glyco_tran_28_C
UDP-glucoronosyl and UDP-glucosyl transferase
Glycosyltransferase family 28 C-terminal domain
3.00E-08
7.50E-05
WP_234357704.1 79986 78606 - 459PF07690
PF00083
PF05977
MFS_1
Sugar_tr
MFS_3
Major Facilitator Superfamily
Sugar (and other) transporter
Transmembrane secretion effector
2.50E-62
1.70E-07
8.90E-05
WP_055705664.1 80391 81384 + 330PF01370
PF13460
PF01073
PF16363
PF04321
Epimerase
NAD_binding_10
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
3-beta hydroxysteroid dehydrogenase/isomerase family
GDP-mannose 4,6 dehydratase
RmlD substrate binding domain
1.10E-42
3.30E-15
1.40E-13
3.30E-12
5.60E-10
WP_055705665.1 81432 82533 + 366PF01041
PF00266
DegT_DnrJ_EryC1
Aminotran_5
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class-V
2.60E-111
2.80E-05
WP_055705666.1 82532 83138 + 201PF00908dTDP_sugar_isomdTDP-4-dehydrorhamnose 3,5-epimerase2.60E-52
WP_055705667.1 83139 84036 + 298PF00483
PF12804
NTP_transferase
NTP_transf_3
Nucleotidyl transferase
MobA-like NTP transferase domain
2.60E-60
3.40E-10
WP_055705668.1 84069 85101 + 343PF16363
PF01370
PF01073
PF02719
PF04321
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
GDP-mannose 4,6 dehydratase
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
Polysaccharide biosynthesis protein
RmlD substrate binding domain
7.70E-80
2.00E-62
1.20E-18
3.50E-18
2.30E-15
WP_055705669.1 85209 85575 + 121NO PFAM MATCH---
WP_055705670.1 85571 87869 + 765PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-101
WP_063797059.1 88001 89255 + 417PF07730HisKA_3Histidine kinase7.10E-14
WP_055705671.1 89358 89967 + 202PF00072
PF00196
PF08281
PF04545
PF14493
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_40
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
Helix-turn-helix domain
1.80E-20
3.50E-16
1.50E-05
6.90E-05
1.70E-04
WP_063797060.1 90640 90010 - 209NO PFAM MATCH---
WP_055705672.1 90926 91205 + 92PF00550PP-bindingPhosphopantetheine attachment site5.90E-07
WP_055705673.1 91226 92021 + 264PF00106
PF13561
PF08659
PF01370
adh_short
adh_short_C2
KR
Epimerase
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
NAD dependent epimerase/dehydratase family
2.70E-65
1.80E-60
1.80E-12
6.30E-05
WP_055705674.1 92048 92984 + 311PF03364
PF10604
Polyketide_cyc
Polyketide_cyc2
Polyketide cyclase / dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport
5.30E-17
6.50E-17
WP_055705675.1 93276 94557 + 426PF00109
PF02801
PF00108
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
Thiolase, N-terminal domain
6.70E-58
2.70E-35
7.80E-06
WP_079048716.1 94553 95831 + 425PF00109
PF02801
ketoacyl-synt
Ketoacyl-synt_C
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
7.90E-39
7.90E-20

Results for WP_055703613.1 [Streptomyces puniciscabiei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_055703605.1 198892 198361 - 176NO PFAM MATCH---
WP_055703606.1 199860 198888 - 323PF11583AurFP-aminobenzoate N-oxygenase AurF5.80E-38
WP_063797008.1 200930 199889 - 346PF00891
PF16864
PF01022
PF09339
PF13545
Methyltransf_2
Dimerisation2
HTH_5
HTH_IclR
HTH_Crp_2
O-methyltransferase domain
Dimerisation domain
Bacterial regulatory protein, arsR family
IclR helix-turn-helix domain
Crp-like helix-turn-helix domain
6.00E-42
8.90E-10
1.70E-04
2.40E-04
3.30E-04
WP_063797006.1 202174 200932 - 413PF00067p450Cytochrome P4506.50E-24
WP_055703609.1 202531 203155 + 207PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
1.70E-17
6.20E-10
5.10E-07
WP_055703610.1 204379 203206 - 390PF01494
PF01266
PF12831
PF00890
PF04820
FAD_binding_3
DAO
FAD_oxidored
FAD_binding_2
Trp_halogenase
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
Tryptophan halogenase
1.40E-21
1.90E-08
5.80E-07
5.00E-06
1.60E-05
WP_055703611.1 205911 204399 - 503PF00881NitroreductaseNitroreductase family2.50E-16
WP_055703612.1 207440 205907 - 510PF00881NitroreductaseNitroreductase family1.50E-11
WP_055703613.1 209467 207451 - 671PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.50E-79
WP_055703614.1 211328 209459 - 622NO PFAM MATCH---
WP_055703615.1 212638 211495 - 380PF04101
PF00201
PF06722
Glyco_tran_28_C
UDPGT
DUF1205
Glycosyltransferase family 28 C-terminal domain
UDP-glucoronosyl and UDP-glucosyl transferase
Protein of unknown function (DUF1205)
1.60E-05
1.30E-04
3.40E-04
WP_055703616.1 213166 212641 - 174PF16363
PF01370
GDP_Man_Dehyd
Epimerase
GDP-mannose 4,6 dehydratase
NAD dependent epimerase/dehydratase family
4.60E-10
1.80E-06
WP_055703617.1 214230 213162 - 355PF00483
PF12804
NTP_transferase
NTP_transf_3
Nucleotidyl transferase
MobA-like NTP transferase domain
1.20E-47
8.00E-11
WP_234357546.1 214960 214264 - 231PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.40E-20
1.00E-11
WP_015657129.1 215097 216070 + 324INFERRED GENE---
WP_055710494.1 217364 216122 - 413PF00067p450Cytochrome P4503.10E-26
WP_142218395.1 218602 217360 - 413PF00201
PF04101
PF03033
UDPGT
Glyco_tran_28_C
Glyco_transf_28
UDP-glucoronosyl and UDP-glucosyl transferase
Glycosyltransferase family 28 C-terminal domain
Glycosyltransferase family 28 N-terminal domain
1.50E-14
3.50E-12
3.80E-05

Results for WP_019030955.1 [Salinispora arenicola] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_142116561.1 65860 67267 + 468PF01593
PF13450
PF01266
PF01946
PF12831
Amino_oxidase
NAD_binding_8
DAO
Thi4
FAD_oxidored
Flavin containing amine oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
Thi4 family
FAD dependent oxidoreductase
1.40E-45
2.30E-13
5.70E-11
2.90E-08
3.50E-08
WP_029024279.1 69362 67421 - 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-81
WP_016812434.1 70114 69358 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
4.80E-26
2.80E-17
WP_012182727.1 71037 70110 - 308PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.10E-26
5.80E-14
9.70E-07
WP_142116560.1 72230 71033 - 398PF02163Peptidase_M50Peptidase family M508.50E-04
WP_012182729.1 73294 72226 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.80E-91
WP_018802307.1 76050 73290 - 919PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.80E-47
WP_029024803.1 77699 76049 - 549PF00881NitroreductaseNitroreductase family9.70E-23
WP_019030955.1 79601 77708 - 630PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-83
WP_029024802.1 81778 79597 - 726PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-10
WP_029024275.1 83583 81774 - 602PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
2.20E-32
1.10E-08
3.80E-08
2.80E-05
WP_012182735.1 84199 85186 + 328PF00196
PF01978
PF13384
PF08279
GerE
TrmB
HTH_23
HTH_11
Bacterial regulatory proteins, luxR family
Sugar-specific transcriptional regulator TrmB
Homeodomain-like domain
HTH domain
2.60E-10
8.50E-07
9.90E-07
5.00E-04
WP_029024274.1 85789 85225 - 187PF13523
PF13302
Acetyltransf_8
Acetyltransf_3
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.40E-48
3.30E-05
WP_012182737.1 85963 86674 + 236PF04954
PF08021
SIP
FAD_binding_9
Siderophore-interacting protein
Siderophore-interacting FAD-binding domain
9.30E-22
8.60E-10
WP_016812452.1 86701 86884 + 60NO PFAM MATCH---
WP_142116559.1 86965 88495 + 509PF07690MFS_1Major Facilitator Superfamily5.70E-44
WP_016812453.1 88926 88551 - 124PF01850PINPIN domain6.80E-12

Results for WP_029024279.1 [Salinispora arenicola] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_170201888.1 59770 59617 - 50NO PFAM MATCH---
WP_080676215.1 60768 60276 - 163PF01980TrmOtRNA-methyltransferase O1.30E-22
WP_170201887.1 62199 60804 - 464PF13424TPR_12Tetratricopeptide repeat3.70E-06
WP_029021347.1 62853 63108 + 84NO PFAM MATCH---
WP_029024809.1 63230 63545 + 104PF14408Actino_peptideRibosomally synthesised peptide in actinomycetes2.20E-13
WP_029024808.1 63549 64506 + 318NO PFAM MATCH---
WP_029024807.1 64502 65648 + 381PF01135
PF13649
PF05175
PF13489
PF13847
PCMT
Methyltransf_25
MTS
Methyltransf_23
Methyltransf_31
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransferase domain
Methyltransferase small domain
Methyltransferase domain
Methyltransferase domain
7.30E-27
2.30E-06
6.40E-05
1.70E-04
1.80E-04
WP_142116561.1 65860 67267 + 468PF01593
PF13450
PF01266
PF01946
PF12831
Amino_oxidase
NAD_binding_8
DAO
Thi4
FAD_oxidored
Flavin containing amine oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
Thi4 family
FAD dependent oxidoreductase
1.40E-45
2.30E-13
5.70E-11
2.90E-08
3.50E-08
WP_029024279.1 69362 67421 - 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-81
WP_016812434.1 70114 69358 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
4.80E-26
2.80E-17
WP_012182727.1 71037 70110 - 308PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.10E-26
5.80E-14
9.70E-07
WP_142116560.1 72230 71033 - 398PF02163Peptidase_M50Peptidase family M508.50E-04
WP_012182729.1 73294 72226 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.80E-91
WP_018802307.1 76050 73290 - 919PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.80E-47
WP_029024803.1 77699 76049 - 549PF00881NitroreductaseNitroreductase family9.70E-23
WP_019030955.1 79601 77708 - 630PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-83
WP_029024802.1 81778 79597 - 726PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-10

Results for WP_029024802.1 [Salinispora arenicola] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_029024279.1 69362 67421 - 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-81
WP_016812434.1 70114 69358 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
4.80E-26
2.80E-17
WP_012182727.1 71037 70110 - 308PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.10E-26
5.80E-14
9.70E-07
WP_142116560.1 72230 71033 - 398PF02163Peptidase_M50Peptidase family M508.50E-04
WP_012182729.1 73294 72226 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.80E-91
WP_018802307.1 76050 73290 - 919PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.80E-47
WP_029024803.1 77699 76049 - 549PF00881NitroreductaseNitroreductase family9.70E-23
WP_019030955.1 79601 77708 - 630PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-83
WP_029024802.1 81778 79597 - 726PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-10
WP_029024275.1 83583 81774 - 602PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
2.20E-32
1.10E-08
3.80E-08
2.80E-05
WP_012182735.1 84199 85186 + 328PF00196
PF01978
PF13384
PF08279
GerE
TrmB
HTH_23
HTH_11
Bacterial regulatory proteins, luxR family
Sugar-specific transcriptional regulator TrmB
Homeodomain-like domain
HTH domain
2.60E-10
8.50E-07
9.90E-07
5.00E-04
WP_029024274.1 85789 85225 - 187PF13523
PF13302
Acetyltransf_8
Acetyltransf_3
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.40E-48
3.30E-05
WP_012182737.1 85963 86674 + 236PF04954
PF08021
SIP
FAD_binding_9
Siderophore-interacting protein
Siderophore-interacting FAD-binding domain
9.30E-22
8.60E-10
WP_016812452.1 86701 86884 + 60NO PFAM MATCH---
WP_142116559.1 86965 88495 + 509PF07690MFS_1Major Facilitator Superfamily5.70E-44
WP_016812453.1 88926 88551 - 124PF01850PINPIN domain6.80E-12
WP_012182741.1 89177 88922 - 84PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system5.80E-10

Results for WP_047525920.1 [Agrobacterium rhizogenes] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_047525915.1 32999 34628 + 542PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 Middle6.10E-78
WP_047525924.1 34736 35726 + 329PF00528
PF19300
BPD_transp_1
BPD_transp_1_N
Binding-protein-dependent transport system inner membrane component
Binding-prot-dependent transport system membrane comp, N-term
7.10E-39
1.20E-14
WP_113137711.1 35722 36652 + 309PF00528
PF12911
BPD_transp_1
OppC_N
Binding-protein-dependent transport system inner membrane component
N-terminal TM domain of oligopeptide transport permease C
1.40E-27
1.50E-06
WP_047525917.1 36661 38383 + 573PF00005
PF13304
PF08352
PF02463
PF13555
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Oligopeptide/dipeptide transporter, C-terminal region
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
5.50E-64
1.50E-18
1.40E-13
6.00E-12
4.50E-08
WP_161601216.1 38774 38621 - 50NO PFAM MATCH---
WP_131596184.1 39538 39166 - 123NO PFAM MATCH---
WP_174035113.1 40001 40784 + 260PF00565SNaseStaphylococcal nuclease homologue4.60E-04
WP_047525919.1 41977 41251 - 241PF07812TfuATfuA-like protein1.10E-42
WP_047525920.1 43173 41973 - 399PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-63
WP_047525921.1 43721 43235 - 161NO PFAM MATCH---
WP_229202693.1 44471 45092 + 206PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
2.10E-13
2.20E-07
1.30E-05
WP_034517292.1 45582 45363 - 72NO PFAM MATCH---
WP_142889747.1 47567 45608 - 652PF13414
PF14559
PF07719
TPR_11
TPR_19
TPR_2
TPR repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.00E-05
1.50E-04
3.70E-04
WP_041723043.1 47934 48621 + 228PF13610
PF03050
PF00665
DDE_Tnp_IS240
DDE_Tnp_IS66
rve
DDE domain
Transposase IS66 family
Integrase core domain
2.10E-56
2.40E-05
5.70E-05
WP_234905581.1 48722 49517 + 264PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.10E-15
WP_142889749.1 49635 50535 + 299PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.30E-33
1.00E-17
WP_142889750.1 50737 51892 + 384PF01266
PF00070
PF00890
PF07992
PF12831
DAO
Pyr_redox
FAD_binding_2
Pyr_redox_2
FAD_oxidored
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
6.10E-33
2.90E-07
1.40E-06
9.80E-06
2.10E-05

Results for WP_006253504.1 back to top

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Couldn't process WP_006253504.1 Genbank filestream. May be corrupt.

Results for WP_044899156.1 [Brevibacillus sp. LEMMJ03] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_255433752.1 31468 33049 + 526PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
5.10E-102
8.60E-23
WP_255433753.1 33097 34468 + 456PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
4.40E-26
6.00E-26
WP_017248420.1 34984 36605 + 540INFERRED GENE---
WP_044899161.1 36691 37465 + 257PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
4.00E-64
2.20E-59
1.30E-17
WP_255433754.1 37496 38285 + 262PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
1.30E-60
1.10E-34
WP_143864194.1 38366 39341 + 324PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
2.10E-33
1.60E-23
8.50E-15
WP_143864195.1 40077 39840 - 78NO PFAM MATCH---
WP_143864196.1 40267 42229 + 653NO PFAM MATCH---
WP_044899156.1 42225 44169 + 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.10E-85
WP_082059622.1 44259 44538 + 92PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA3.40E-13
WP_143864197.1 44542 45211 + 222PF02492
PF03205
PF03308
PF00009
cobW
MobB
MeaB
GTP_EFTU
CobW/HypB/UreG, nucleotide-binding domain
Molybdopterin guanine dinucleotide synthesis protein B
Methylmalonyl Co-A mutase-associated GTPase MeaB
Elongation factor Tu GTP binding domain
4.40E-27
3.30E-05
7.60E-05
1.50E-04

Results for WP_041480435.1 [Pseudomonas koreensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041478658.1 342646 343405 + 252PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
7.20E-50
2.50E-41
2.30E-11
WP_041478657.1 343436 344393 + 318PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3.20E-42
1.70E-21
WP_221264808.1 344885 345115 + 75NO PFAM MATCH---
WP_041480431.1 345894 345552 - 113NO PFAM MATCH---
WP_041480628.1 346621 345979 - 213PF13230GATase_4Glutamine amidotransferases class-II2.50E-05
WP_041480432.1 346788 347037 + 82NO PFAM MATCH---
WP_041480433.1 347142 348300 + 385PF00990GGDEFDiguanylate cyclase, GGDEF domain1.80E-36
WP_041480434.1 348308 348803 + 164NO PFAM MATCH---
WP_041480435.1 351142 348937 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.80E-73
8.20E-71
7.90E-08
WP_041480436.1 351362 353972 + 869PF00563
PF00990
PF05228
PF00989
PF08448
EAL
GGDEF
CHASE4
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
CHASE4 domain
PAS fold
PAS fold
6.50E-72
2.60E-49
8.40E-13
5.20E-09
2.10E-07
WP_041480437.1 354977 353975 - 333PF02322Cyt_bd_oxida_IICytochrome bd terminal oxidase subunit II8.20E-78
WP_041480438.1 356363 354989 - 457PF01654Cyt_bd_oxida_ICytochrome bd terminal oxidase subunit I1.60E-144
WP_041480439.1 356756 356366 - 129PF00903
PF18029
Glyoxalase
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
1.40E-05
5.70E-04
WP_041480440.1 356995 356779 - 71NO PFAM MATCH---
WP_041480441.1 358518 357702 - 271PF03976PPK2Polyphosphate kinase 2 (PPK2)1.40E-93
WP_041480442.1 358708 360835 + 708PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.40E-26
1.30E-10
WP_041480443.1 361073 361859 + 261PF14581
PF07179
SseB_C
SseB
SseB protein C-terminal domain
SseB protein N-terminal domain
1.50E-33
6.00E-22

Results for WP_041986885.1 [Pseudomonas chlororaphis subsp. aureofaciens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038631508.1 112638 112902 + 87PF01320Colicin_PyocinColicin immunity protein / pyocin immunity protein1.50E-30
WP_038636525.1 112906 113167 + 86PF01320Colicin_PyocinColicin immunity protein / pyocin immunity protein4.00E-35
WP_041986875.1 113224 113845 + 206NO PFAM MATCH---
WP_041986877.1 117032 113942 - 1029PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
3.80E-148
1.60E-04
WP_041986879.1 118138 117028 - 369PF16576
PF13437
PF13533
PF00364
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
Biotin-requiring enzyme
1.40E-14
1.60E-11
3.50E-06
1.10E-04
WP_041986881.1 118356 119817 + 486PF02321OEPOuter membrane efflux protein2.10E-44
WP_041986883.1 121221 119949 - 423PF03349
PF02530
PF10677
Toluene_X
Porin_2
DUF2490
Outer membrane protein transport protein (OMPP1/FadL/TodX)
Porin subfamily
Protein of unknown function (DUF2490)
4.00E-115
5.50E-05
1.60E-04
WP_009048299.1 122039 121418 - 206PF00440
PF17935
TetR_N
TetR_C_27
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
5.50E-13
8.90E-09
WP_041986885.1 122405 124607 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.80E-74
8.00E-73
1.00E-07
WP_041986888.1 127530 124692 - 945PF00593
PF07715
PF07660
TonB_dep_Rec
Plug
STN
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Secretin and TonB N terminus short domain
7.20E-36
1.40E-15
1.90E-06
WP_041986890.1 128593 127627 - 321PF16220
PF04773
DUF4880
FecR
Domain of unknown function (DUF4880)
FecR protein
7.00E-13
2.20E-11
WP_009048295.1 129096 128589 - 168PF04542
PF08281
PF04545
PF07638
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma-70 region 2
Sigma-70, region 4
Sigma-70, region 4
ECF sigma factor
1.00E-14
1.70E-10
3.40E-05
1.90E-04
WP_009048294.1 129368 129671 + 100NO PFAM MATCH---
WP_041986892.1 129936 130689 + 250PF00484Pro_CACarbonic anhydrase1.00E-35
WP_041986894.1 131090 130811 - 92NO PFAM MATCH---
WP_009043206.1 132122 131573 - 182PF07883
PF01381
PF13560
PF12844
PF00190
Cupin_2
HTH_3
HTH_31
HTH_19
Cupin_1
Cupin domain
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cupin
1.00E-17
9.10E-12
4.00E-09
4.10E-07
1.80E-04
WP_169751700.1 133765 132484 - 426PF01266
PF01946
PF01494
PF00890
PF13450
DAO
Thi4
FAD_binding_3
FAD_binding_2
NAD_binding_8
FAD dependent oxidoreductase
Thi4 family
FAD binding domain
FAD binding domain
NAD(P)-binding Rossmann-like domain
5.50E-53
2.40E-06
2.50E-06
2.30E-05
2.60E-05

Results for WP_063260286.1 [Bacillus mobilis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063260292.1 93761 93491 - 89NO PFAM MATCH---
WP_063260291.1 94139 93779 - 119NO PFAM MATCH---
WP_001178300.1 94447 94264 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_063260290.1 94853 94475 - 125NO PFAM MATCH---
WP_063260289.1 95065 94849 - 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.20E-05
7.40E-05
WP_063260288.1 95890 98758 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
7.80E-64
5.10E-55
1.00E-36
WP_000569925.1 98890 100150 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.10E-81
3.40E-20
5.10E-13
1.60E-04
WP_063260287.1 100424 102344 + 639NO PFAM MATCH---
WP_063260286.1 102340 104290 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-84
WP_063260285.1 104306 105848 + 513PF00881NitroreductaseNitroreductase family2.00E-12
WP_063260284.1 105939 106530 + 196PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.20E-17
9.30E-16
1.60E-15
1.60E-11
3.60E-11
WP_063260283.1 106971 106560 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.80E-52
WP_063260282.1 107757 107268 - 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.30E-10
7.10E-07
1.60E-05
WP_063260281.1 109192 107857 - 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
1.10E-64
3.10E-20
6.50E-17
1.40E-14
6.20E-11
WP_063260280.1 109393 109822 + 142NO PFAM MATCH---
WP_063260279.1 111096 109860 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
1.70E-22
7.10E-06
WP_063260278.1 111901 111115 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.80E-06
1.50E-05
7.50E-04

Results for WP_024595461.1 [Pseudoalteromonas sp. LC2018020214] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007377323.1 3584783 3585158 + 124PF03965
PF01978
Penicillinase_R
TrmB
Penicillinase repressor
Sugar-specific transcriptional regulator TrmB
7.50E-35
4.00E-04
WP_197121530.1 3585167 3586376 + 402PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
6.30E-37
1.80E-17
WP_024605945.1 3586833 3586449 - 127PF01124MAPEGMAPEG family1.20E-20
WP_200219653.1 3587068 3587947 + 292PF00892EamAEamA-like transporter family1.60E-12
WP_002962354.1 3588331 3588013 - 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein5.80E-21
WP_024595458.1 3589863 3588330 - 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
7.60E-32
5.20E-05
WP_193226766.1 3590800 3589951 - 282PF00753Lactamase_BMetallo-beta-lactamase superfamily6.50E-09
WP_200219654.1 3593144 3590858 - 761PF01804Penicil_amidasePenicillin amidase2.20E-123
WP_024595461.1 3593300 3595061 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.20E-78
3.10E-58
WP_138489822.1 3595176 3598539 + 1120PF02518
PF00072
PF00512
PF03924
PF13492
HATPase_c
Response_reg
HisKA
CHASE
GAF_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
GAF domain
1.20E-28
4.40E-23
7.20E-19
9.60E-17
2.70E-06
WP_002962344.1 3598582 3599212 + 209PF04337DUF480Protein of unknown function, DUF4806.60E-60
WP_024589633.1 3599280 3600111 + 276PF02540NAD_synthaseNAD synthase1.10E-63
WP_039486916.1 3600334 3601054 + 239PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
2.00E-26
3.80E-24
1.30E-07
5.70E-04
WP_002962341.1 3601076 3601631 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I3.40E-77
WP_002962340.1 3601635 3601992 + 118PF02152FolBDihydroneopterin aldolase3.60E-27
WP_033021866.1 3602443 3602008 - 144PF09335SNARE_assocSNARE associated Golgi protein7.80E-14
WP_002962338.1 3603037 3602671 - 121PF09685DUF4870Domain of unknown function (DUF4870)1.70E-40

Results for WP_018642010.1 back to top

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Couldn't process WP_018642010.1 Genbank filestream. May be corrupt.

Results for WP_022718503.1 [Rhizobium mongolense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022718511.1 13601 12884 - 238PF01520Amidase_3N-acetylmuramoyl-L-alanine amidase2.20E-17
WP_022718510.1 14344 13597 - 248PF08239SH3_3Bacterial SH3 domain4.30E-06
WP_022718509.1 15727 14653 - 357PF00246Peptidase_M14Zinc carboxypeptidase6.90E-44
WP_145611433.1 16027 15730 - 98NO PFAM MATCH---
WP_022718507.1 17538 16197 - 446PF03415Peptidase_C11Clostripain family3.80E-48
WP_022718506.1 19173 17586 - 528PF00082Peptidase_S8Subtilase family1.00E-35
WP_167521877.1 19623 21300 + 558PF07719
PF03704
PF13428
PF13414
PF13431
TPR_2
BTAD
TPR_14
TPR_11
TPR_17
Tetratricopeptide repeat
Bacterial transcriptional activator domain
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
1.30E-07
2.90E-07
1.70E-05
1.20E-04
2.10E-04
WP_022718504.1 21309 21867 + 185NO PFAM MATCH---
WP_022718503.1 21871 23113 + 413PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.00E-38
WP_022718502.1 23109 23820 + 236PF07812TfuATfuA-like protein7.60E-41
WP_145611431.1 23851 25147 + 431NO PFAM MATCH---
WP_071831742.1 25158 25398 + 80INFERRED GENE---
WP_022718500.1 27126 25761 - 454NO PFAM MATCH---
WP_007690308.1 27224 27700 + 158INFERRED GENE---
WP_084797076.1 28207 29482 + 424PF00149MetallophosCalcineurin-like phosphoesterase2.70E-09
WP_022718496.1 29482 30670 + 395NO PFAM MATCH---
WP_145611429.1 30821 31427 + 201PF11185DUF2971Protein of unknown function (DUF2971)1.70E-06

Results for WP_014197662.1 [Azospirillum baldaniorum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_174451889.1 645 3747 + 1033PF00211
PF13191
PF13424
PF07719
PF13176
Guanylate_cyc
AAA_16
TPR_12
TPR_2
TPR_7
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.50E-21
8.20E-17
4.70E-10
5.40E-08
2.10E-04
WP_014197659.1 4072 3763 - 102PF13467RHH_4Ribbon-helix-helix domain4.60E-21
WP_014197661.1 4303 4498 + 64NO PFAM MATCH---
WP_014197662.1 4661 5924 + 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-83
WP_014197663.1 5977 6745 + 255PF07812TfuATfuA-like protein4.40E-49
WP_014197664.1 6801 7512 + 236PF00027
PF13545
PF00392
cNMP_binding
HTH_Crp_2
GntR
Cyclic nucleotide-binding domain
Crp-like helix-turn-helix domain
Bacterial regulatory proteins, gntR family
1.80E-23
6.60E-15
2.20E-04
WP_145707769.1 7617 8004 + 128PF13467RHH_4Ribbon-helix-helix domain1.50E-19
WP_109138743.1 8221 10264 + 680PF17159
PF02518
PF08448
PF00989
PF00512
MASE3
HATPase_c
PAS_4
PAS
HisKA
Membrane-associated sensor domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PAS fold
PAS fold
His Kinase A (phospho-acceptor) domain
5.50E-77
8.00E-21
2.90E-09
1.70E-07
4.20E-07
WP_041812332.1 10241 10637 + 131PF00072Response_regResponse regulator receiver domain1.50E-18
WP_014197670.1 10991 11924 + 310PF01370
PF16363
PF01073
PF02719
PF04321
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
3-beta hydroxysteroid dehydrogenase/isomerase family
Polysaccharide biosynthesis protein
RmlD substrate binding domain
1.90E-55
4.50E-47
6.60E-20
3.90E-19
3.60E-13
WP_244948017.1 13584 11943 - 546PF02690
PF01895
Na_Pi_cotrans
PhoU
Na+/Pi-cotransporter
PhoU domain
1.90E-38
6.40E-16
WP_145707774.1 14668 13768 - 299PF00892
PF03151
EamA
TPT
EamA-like transporter family
Triose-phosphate Transporter family
9.30E-43
5.50E-04

Results for WP_044979135.1 [Treponema putidum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_255824035.1 869994 870159 + 54PF04452Methyltrans_RNARNA methyltransferase domain1.40E-10
WP_255824037.1 870139 870880 + 246PF03808Glyco_tran_WecGGlycosyl transferase WecG/TagA/CpsF family2.40E-27
WP_255824039.1 870893 872021 + 375NO PFAM MATCH---
WP_255824041.1 872345 872024 - 106NO PFAM MATCH---
WP_255824043.1 872444 872750 + 101PF01391CollagenCollagen triple helix repeat (20 copies)4.60E-05
WP_255824045.1 872800 873637 + 278PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.20E-18
WP_255824047.1 873596 874442 + 281NO PFAM MATCH---
WP_255824049.1 874434 875025 + 196NO PFAM MATCH---
WP_255824051.1 875047 876004 + 318PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.90E-07
WP_044979135.1 876014 877007 + 330PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-09
WP_255824053.1 877026 878655 + 542PF00664
PF00005
PF02463
ABC_membrane
ABC_tran
SMC_N
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
6.70E-24
7.30E-18
2.70E-04
WP_255824055.1 878833 881101 + 755PF08367
PF05193
PF00675
M16C_assoc
Peptidase_M16_C
Peptidase_M16
Peptidase M16C associated
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
3.10E-51
9.10E-24
6.50E-08
WP_255824057.1 881108 881906 + 265NO PFAM MATCH---
WP_255806229.1 881938 882475 + 178PF02075RuvCCrossover junction endodeoxyribonuclease RuvC5.90E-49
WP_044979138.1 882467 883073 + 201PF01330
PF14520
PF00633
PF14716
RuvA_N
HHH_5
HHH
HHH_8
RuvA N terminal domain
Helix-hairpin-helix domain
Helix-hairpin-helix motif
Helix-hairpin-helix domain
4.40E-17
2.00E-16
6.30E-07
1.00E-04
WP_255806230.1 883155 884022 + 288PF04754Transposase_31Putative transposase, YhgA-like2.30E-06
WP_255818977.1 885395 884108 - 428PF13349DUF4097Putative adhesin7.80E-17
WP_255824059.1 886447 885475 - 323PF13349DUF4097Putative adhesin3.00E-14

Results for WP_021553487.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_415433.4 49 1228 + 393INFERRED GENE---
WP_000167336.1 1720 1435 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 3553 1879 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 4347 3663 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_001295345.1 5284 4519 - 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000445231.1 6736 5452 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_000057149.1 7895 6806 - 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000642849.1 8786 8093 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_021553487.1 8915 10676 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-83
6.50E-67
WP_060707410.1 11081 11939 + 285PF01226Form_Nir_transFormate/nitrite transporter6.30E-75
WP_001292812.1 11993 14276 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.60E-208
1.60E-43
WP_000111043.1 14467 15208 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06

Results for WP_048214575.1 [Citrobacter portucalensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003831906.1 20841 21705 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.90E-119
WP_003035746.1 22442 21815 - 208PF00857IsochorismataseIsochorismatase family9.50E-22
WP_003831907.1 22827 23976 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.60E-29
3.80E-09
4.90E-07
8.70E-05
WP_128316672.1 24189 25611 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-29
5.10E-13
WP_255584655.1 26460 25665 - 264NO PFAM MATCH---
WP_003035751.1 27287 26546 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-32
1.30E-18
4.50E-06
WP_003035753.1 29880 27597 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.00E-208
4.70E-44
WP_003831909.1 30797 29939 - 285PF01226Form_Nir_transFormate/nitrite transporter3.10E-74
WP_048214575.1 32962 31201 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-82
4.70E-67
WP_008784261.1 33098 33791 + 230PF04239DUF421Protein of unknown function (DUF421)2.50E-16
WP_237857193.1 34003 35092 + 362PF00266Aminotran_5Aminotransferase class-V1.00E-69
WP_237857192.1 35162 36446 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.20E-151
WP_003831921.1 36617 37301 + 227PF02224
PF13189
PF00005
PF13238
Cytidylate_kin
Cytidylate_kin2
ABC_tran
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
ABC transporter
AAA domain
1.70E-84
2.10E-06
8.30E-04
9.10E-04
WP_003035776.1 37414 39088 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.10E-100
7.50E-12
9.00E-07
WP_003035780.1 39247 39532 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.80E-29
5.40E-07
4.30E-04
WP_270562629.1 39738 42003 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.60E-50
3.30E-18
3.60E-05
WP_048214571.1 42039 43788 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
4.90E-61
4.20E-36
7.70E-11
1.40E-05
2.50E-04

Results for WP_065944197.1 [Pseudomonas brenneri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003171868.1 485595 485139 - 151PF02381MraZMraZ protein, putative antitoxin-like2.60E-33
WP_090292010.1 487270 486397 - 290PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases1.00E-28
WP_090292012.1 487489 489301 + 603PF04348
PF13458
LppC
Peripla_BP_6
LppC putative lipoprotein
Periplasmic binding protein
5.70E-168
2.70E-07
WP_032860049.1 489300 489672 + 123PF02021UPF0102Uncharacterised protein family UPF01023.10E-26
WP_003171862.1 489776 490370 + 197PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
1.20E-33
9.40E-07
WP_032860050.1 490366 490948 + 193PF04972BONBON domain4.40E-28
WP_032860051.1 491781 491016 - 254PF00691
PF13488
PF13441
OmpA
Gly-zipper_Omp
Gly-zipper_YMGG
OmpA family
Glycine zipper
YMGG-like Gly-zipper
1.20E-22
7.90E-06
8.10E-04
WP_090292014.1 492592 491947 - 214PF00753
PF14597
Lactamase_B
Lactamase_B_5
Metallo-beta-lactamase superfamily
Metallo-beta-lactamase superfamily
7.60E-30
8.90E-04
WP_065944197.1 494794 492604 - 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.90E-73
3.90E-72
3.70E-08
WP_090292017.1 497605 494866 - 912PF00196
PF17874
PF13191
GerE
TPR_MalT
AAA_16
Bacterial regulatory proteins, luxR family
MalT-like TPR region
AAA ATPase domain
3.40E-18
1.00E-11
3.70E-08
WP_029297800.1 499247 497882 - 454PF07044
PF17131
DUF1329
LolA_like
Protein of unknown function (DUF1329)
Outer membrane lipoprotein-sorting protein
5.00E-157
3.20E-07
WP_032860055.1 501168 499275 - 630PF06980DUF1302Protein of unknown function (DUF1302)1.10E-171
WP_032860056.1 503186 501503 - 560PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
9.60E-86
6.20E-17
WP_032860057.1 503962 503332 - 209PF01810LysELysE type translocator9.40E-35
WP_090292019.1 504046 505012 + 321PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
4.80E-50
2.10E-24
WP_090292021.1 505043 506042 + 332PF05175
PF08468
PF13649
PF08242
PF00891
MTS
MTS_N
Methyltransf_25
Methyltransf_12
Methyltransf_2
Methyltransferase small domain
Methyltransferase small domain N-terminal
Methyltransferase domain
Methyltransferase domain
O-methyltransferase domain
1.60E-55
5.30E-42
2.80E-08
5.00E-06
8.70E-06
WP_032860060.1 506302 506887 + 194PF01169UPF0016Uncharacterized protein family UPF00161.80E-41

Results for WP_039029489.1 [Leclercia adecarboxylata] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_139564680.1 3715491 3717936 + 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
3.00E-105
3.90E-27
1.90E-17
WP_139564681.1 3717946 3718564 + 205PF13247
PF12797
PF00037
PF13187
PF12837
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_6
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
1.90E-28
9.90E-13
1.70E-12
3.60E-12
6.40E-11
WP_138369443.1 3718565 3719429 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.20E-113
WP_039029494.1 3719703 3720852 + 382PF07690
PF06779
PF00083
PF13347
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_2
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS/sugar transport protein
MFS_1 like family
5.70E-28
8.90E-12
3.40E-06
6.00E-05
1.30E-04
WP_039029493.1 3720975 3721488 + 170NO PFAM MATCH---
WP_039029492.1 3722263 3721522 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.40E-31
1.40E-18
2.20E-06
WP_039029491.1 3724749 3722466 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.40E-205
5.10E-44
WP_139564682.1 3725658 3724800 - 285PF01226Form_Nir_transFormate/nitrite transporter3.80E-74
WP_039029489.1 3727823 3726062 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.80E-84
3.40E-67
WP_139564683.1 3727961 3728654 + 230PF04239DUF421Protein of unknown function (DUF421)8.20E-15
WP_139564684.1 3728816 3729905 + 362PF00266Aminotran_5Aminotransferase class-V7.00E-69
WP_139564685.1 3729974 3731258 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-151
WP_039029485.1 3731441 3732125 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
8.50E-85
3.90E-08
6.80E-05
4.80E-04
8.80E-04
WP_032617357.1 3732236 3733910 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-98
1.50E-11
9.10E-07
WP_039029484.1 3734030 3734318 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
3.10E-29
4.40E-08
1.80E-04
WP_139564686.1 3734531 3736796 + 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
5.90E-50
3.20E-17
9.10E-07
WP_039029482.1 3736832 3738581 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
2.70E-60
6.90E-37
1.10E-10
1.70E-05
1.20E-04

Results for WP_030698891.1 [Streptomyces sp. WAC00276] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_030698896.1 3946724 3947096 + 123NO PFAM MATCH---
WP_030698895.1 3947092 3948034 + 313PF00005
PF13304
PF13401
ABC_tran
AAA_21
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
1.70E-28
2.50E-14
1.10E-04
WP_030698894.1 3948030 3948828 + 265PF12698
PF12730
ABC2_membrane_3
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 family transporter protein
2.90E-05
1.00E-04
WP_008405005.1 3949167 3948891 - 91PF03621MbtHMbtH-like protein7.00E-30
WP_030698893.1 3950133 3949323 - 269PF12697
PF00561
PF12146
PF08386
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Abhydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
TAP-like protein
1.00E-19
7.80E-17
1.30E-09
7.00E-05
WP_047471013.1 3951594 3950169 - 474PF00171AldedhAldehyde dehydrogenase family1.10E-26
WP_023418725.1 3952488 3953436 + 315PF12840
PF01022
PF12802
PF13545
PF13412
HTH_20
HTH_5
MarR_2
HTH_Crp_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Crp-like helix-turn-helix domain
Winged helix-turn-helix DNA-binding
3.00E-08
1.70E-06
3.20E-05
2.80E-04
3.00E-04
WP_175457485.1 3953671 3953848 + 58NO PFAM MATCH---
WP_030698891.1 3953844 3956136 + 763PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-98
WP_047471011.1 3956281 3957544 + 420PF07730HisKA_3Histidine kinase3.00E-15
WP_023418729.1 3957586 3958198 + 203PF00072
PF00196
PF08281
PF13384
PF04545
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
Sigma-70, region 4
1.80E-19
8.70E-18
6.60E-06
1.40E-05
1.50E-04
WP_030698889.1 3958891 3958207 - 227NO PFAM MATCH---
WP_247860761.1 3960602 3959063 - 512PF03703bPH_2Bacterial PH domain3.00E-43
WP_175457487.1 3961132 3960598 - 177PF03703bPH_2Bacterial PH domain1.20E-14
WP_030698886.1 3961163 3962306 + 380PF00346Complex1_49kDaRespiratory-chain NADH dehydrogenase, 49 Kd subunit2.40E-67
WP_018895486.1 3962443 3963489 + 348INFERRED GENE---
WP_030698884.1 3963678 3964884 + 401PF07730
PF02518
HisKA_3
HATPase_c
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
4.90E-22
3.70E-05

Results for WP_042870233.1 [Dickeya poaceiphila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_042870245.1 2350721 2351459 + 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
9.60E-78
4.90E-07
1.80E-06
2.40E-06
9.70E-06
WP_042870243.1 2351440 2352217 + 258PF00977
PF01207
PF03060
PF05690
His_biosynth
Dus
NMO
ThiG
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Thiazole biosynthesis protein ThiG
7.60E-76
3.90E-07
1.10E-05
6.80E-05
WP_042870241.1 2352210 2352825 + 204PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
1.30E-31
4.10E-14
WP_042870239.1 2353247 2352962 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
5.60E-29
2.00E-06
WP_042873892.1 2355014 2353340 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.30E-98
2.60E-12
1.70E-06
WP_042870237.1 2355807 2355120 - 228PF02224
PF13189
PF13238
Cytidylate_kin
Cytidylate_kin2
AAA_18
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
4.50E-82
8.40E-07
3.90E-04
WP_042873891.1 2357290 2356000 - 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.20E-149
WP_042870235.1 2358474 2357388 - 361PF00266Aminotran_5Aminotransferase class-V1.20E-60
WP_042870233.1 2358738 2360505 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.20E-81
6.70E-69
WP_042870231.1 2360995 2361853 + 285PF01226Form_Nir_transFormate/nitrite transporter1.40E-73
WP_146411319.1 2361909 2364192 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
6.50E-207
3.40E-43
WP_042873889.1 2364494 2365235 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.60E-30
2.40E-18
2.70E-06
WP_042873888.1 2366541 2365392 - 382PF07690
PF06779
MFS_1
MFS_4
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
1.00E-26
3.40E-09
WP_042870227.1 2367189 2367834 + 214PF01323DSBADSBA-like thioredoxin domain1.50E-04
WP_042870226.1 2367959 2368565 + 201PF02798
PF13417
PF13409
PF00043
PF13410
GST_N
GST_N_3
GST_N_2
GST_C
GST_C_2
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
7.40E-15
2.60E-13
6.30E-10
2.00E-07
2.50E-06
WP_042870223.1 2369327 2368712 - 204PF02613Nitrate_red_delNitrate reductase delta subunit3.30E-19
WP_042870221.1 2370914 2369618 - 431PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
3.90E-34
1.40E-31

Results for WP_061139690.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001128614.1 1159658 1160342 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.90E-74
WP_000424529.1 1161190 1160356 - 277PF11667DUF3267Putative zincin peptidase8.40E-04
WP_000650084.1 1161386 1162172 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.00E-05
1.20E-04
WP_016513130.1 1162191 1163427 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
2.90E-22
1.30E-05
WP_000332398.1 1163895 1163466 - 142NO PFAM MATCH---
WP_001110239.1 1164094 1165429 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
8.10E-65
1.50E-20
6.60E-17
1.90E-15
2.10E-10
WP_000996782.1 1165588 1165999 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001175540.1 1167571 1166029 - 513PF00881NitroreductaseNitroreductase family9.50E-12
WP_061139690.1 1169536 1167586 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-84
WP_061139689.1 1171452 1169532 - 639NO PFAM MATCH---
WP_000569926.1 1172836 1171576 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
4.10E-13
1.70E-04
WP_044795471.1 1175837 1172969 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.10E-63
5.20E-55
1.30E-36
WP_001178294.1 1176665 1176848 + 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_061139688.1 1176980 1177343 + 120NO PFAM MATCH---
WP_061139687.1 1177765 1178362 + 198PF12870DUF4878Domain of unknown function (DUF4878)2.90E-04
WP_000846655.1 1179232 1178767 - 154PF20251
PF16723
Big_14
DUF5065
Bacterial Ig-like domain
Domain of unknown function (DUF5065)
1.90E-05
3.10E-04
WP_000196288.1 1180043 1179821 - 73NO PFAM MATCH---

Results for WP_057770866.1 [Bacillus dafuensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_057770851.1 2833849 2831572 - 758PF18211Csm1_BCsm1 subunit domain B2.60E-13
WP_057770853.1 2835745 2834638 - 368PF13378
PF02746
PF00113
MR_MLE_C
MR_MLE_N
Enolase_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Enolase, C-terminal TIM barrel domain
3.80E-46
2.50E-12
2.60E-04
WP_057770855.1 2836300 2835760 - 179PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
3.60E-27
8.00E-11
WP_057770858.1 2836578 2836788 + 69PF00684DnaJ_CXXCXGXGDnaJ central domain5.20E-06
WP_057770860.1 2838031 2836846 - 394PF00990
PF13492
PF13185
PF01590
GGDEF
GAF_3
GAF_2
GAF
Diguanylate cyclase, GGDEF domain
GAF domain
GAF domain
GAF domain
2.40E-38
4.10E-09
1.30E-07
9.00E-07
WP_057770862.1 2839480 2838496 - 327PF13487
PF01966
HD_5
HD
HD domain
HD domain
1.40E-09
2.50E-07
WP_057771518.1 2840679 2839623 - 351PF03576Peptidase_S58Peptidase family S586.90E-107
WP_057770864.1 2842763 2841194 - 522PF00881NitroreductaseNitroreductase family2.40E-13
WP_057770866.1 2844729 2842785 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-82
WP_057770868.1 2846690 2844725 - 654NO PFAM MATCH---
WP_228460206.1 2847320 2846915 - 134NO PFAM MATCH---
WP_057770873.1 2848611 2847546 - 354PF00246Peptidase_M14Zinc carboxypeptidase1.00E-17
WP_057770875.1 2849094 2851143 + 682PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.10E-61
4.60E-17
2.30E-15
WP_057770877.1 2851987 2851213 - 257PF03741
PF04332
TerC
DUF475
Integral membrane protein TerC family
Protein of unknown function (DUF475)
2.70E-52
1.40E-06
WP_057770879.1 2854480 2852284 - 731PF00563
PF00990
PF13426
PF08448
PF00989
EAL
GGDEF
PAS_9
PAS_4
PAS
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
8.20E-78
3.10E-43
6.20E-24
4.10E-14
1.40E-12
WP_057770881.1 2855399 2855828 + 142PF13673
PF13508
PF00583
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
1.10E-08
3.90E-05
7.20E-05
WP_057770883.1 2856044 2856509 + 154PF00583
PF13673
PF08445
PF13508
PF14542
Acetyltransf_1
Acetyltransf_10
FR47
Acetyltransf_7
Acetyltransf_CG
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
FR47-like protein
Acetyltransferase (GNAT) domain
GCN5-related N-acetyl-transferase
5.20E-15
5.00E-09
2.90E-06
9.70E-06
6.30E-04
WP_267128883.1 2856632 2856500 - 43NO PFAM MATCH---

Results for WP_025343802.1 [Sulfurospirillum multivorans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025343794.1 594680 594026 - 217PF08843AbiEiiNucleotidyl transferase AbiEii toxin, Type IV TA system8.90E-10
WP_025343795.1 595122 594672 - 149NO PFAM MATCH---
WP_025343796.1 595265 595766 + 166PF00355RieskeRieske [2Fe-2S] domain1.00E-10
WP_025343797.1 595762 596923 + 386PF00033
PF13631
PF00032
PF14358
Cytochrome_B
Cytochrom_B_N_2
Cytochrom_B_C
DUF4405
Cytochrome b/b6/petB
Cytochrome b(N-terminal)/b6/petB
Cytochrome b(C-terminal)/b6/petD
Domain of unknown function (DUF4405)
3.50E-48
2.20E-31
4.30E-21
1.40E-05
WP_025343798.1 596909 597179 + 89NO PFAM MATCH---
WP_025343799.1 597714 597201 - 170PF03653
PF05425
UPF0093
CopD
Uncharacterised protein family (UPF0093)
Copper resistance protein D
2.90E-48
1.50E-04
WP_025343800.1 597854 599096 + 413PF00270
PF00271
PF04851
DEAD
Helicase_C
ResIII
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
2.50E-47
1.00E-27
1.90E-07
WP_025343801.1 600458 599117 - 446PF02447
PF03600
GntP_permease
CitMHS
GntP family permease
Citrate transporter
3.40E-97
3.30E-13
WP_025343802.1 602215 600592 - 540PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-64
6.10E-06
WP_025343803.1 602794 603313 + 172NO PFAM MATCH---
WP_025343804.1 604997 603398 - 532PF08269
PF17200
PF02518
PF17201
PF14501
dCache_2
sCache_2
HATPase_c
Cache_3-Cache_2
HATPase_c_5
Cache domain
Single Cache domain 2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Cache 3/Cache 2 fusion domain
GHKL domain
3.60E-23
3.00E-19
4.70E-18
1.10E-05
4.40E-05
WP_025343805.1 605080 605755 + 224PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
1.00E-23
3.60E-12
WP_025343806.1 605918 606908 + 329PF03480DctPBacterial extracellular solute-binding protein, family 71.50E-99
WP_025343807.1 607013 607577 + 187PF04290DctQTripartite ATP-independent periplasmic transporters, DctQ component2.60E-31
WP_025343808.1 607563 608847 + 427PF06808DctMTripartite ATP-independent periplasmic transporter, DctM component4.50E-122
WP_025343809.1 608951 609245 + 97PF01909
PF18765
NTP_transf_2
Polbeta
Nucleotidyltransferase domain
Polymerase beta, Nucleotidyltransferase
2.10E-13
9.70E-13
WP_025343810.1 609237 609591 + 117PF01934HepT-likeRibonuclease HepT-like5.60E-24

Results for WP_034623592.1 back to top

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Couldn't process WP_034623592.1 Genbank filestream. May be corrupt.

Results for WP_004068676.1 [Pyrococcus furiosus DSM 3638] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244949829.1 1866627 1866051 - 191NO PFAM MATCH---
WP_014835502.1 1867421 1866827 - 197PF04055
PF13394
PF13353
Radical_SAM
Fer4_14
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-08
3.10E-06
1.60E-05
WP_011013209.1 1867790 1868606 + 271PF01061ABC2_membraneABC-2 type transporter3.40E-08
WP_011013210.1 1868609 1868894 + 94PF12802
PF13412
PF01978
PF01047
PF03965
MarR_2
HTH_24
TrmB
MarR
Penicillinase_R
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
MarR family
Penicillinase repressor
1.80E-07
1.80E-06
2.40E-06
2.80E-06
2.50E-05
WP_011013211.1 1870654 1868899 - 584PF01433Peptidase_M1Peptidase family M1 domain1.40E-13
WP_004068689.1 1872130 1870711 - 472PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-16
1.20E-08
1.50E-08
WP_004068683.1 1874397 1872627 - 589PF01433Peptidase_M1Peptidase family M1 domain1.00E-14
WP_004068677.1 1875395 1874561 - 277PF00881NitroreductaseNitroreductase family2.20E-30
WP_004068676.1 1876711 1875406 - 434PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.70E-58
WP_004068674.1 1877808 1876707 - 366PF00899
PF01488
ThiF
Shikimate_DH
ThiF family
Shikimate / quinate 5-dehydrogenase
3.90E-19
1.40E-05
WP_223208989.1 1878426 1877820 - 201NO PFAM MATCH---
WP_004068668.1 1879394 1878590 - 267PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
3.80E-21
5.80E-12
9.00E-05
WP_020953572.1 1879599 1879440 - 52NO PFAM MATCH---
WP_011011118.1 1879775 1880768 + 330PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
1.90E-23
5.00E-10
4.90E-04
WP_011011119.1 1880931 1882419 + 495PF01637
PF13173
PF13191
PF13412
PF04471
ATPase_2
AAA_14
AAA_16
HTH_24
Mrr_cat
ATPase domain predominantly from Archaea
AAA domain
AAA ATPase domain
Winged helix-turn-helix DNA-binding
Restriction endonuclease
3.60E-12
3.40E-11
2.10E-10
1.70E-05
2.40E-05
WP_011011120.1 1882521 1883016 + 164PF01230
PF11969
PF04677
HIT
DcpS_C
CwfJ_C_1
HIT domain
Scavenger mRNA decapping enzyme C-term binding
Protein similar to CwfJ C-terminus 1
3.80E-16
2.80E-08
8.80E-05
WP_011011121.1 1883005 1883698 + 230PF00899
PF03435
ThiF
Sacchrp_dh_NADP
ThiF family
Saccharopine dehydrogenase NADP binding domain
1.70E-59
6.60E-04

Results for WP_032639257.1 [Enterobacter chengduensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032639269.1 145380 143631 - 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
7.30E-61
2.60E-36
8.80E-10
8.80E-06
2.00E-04
WP_032639267.1 147681 145416 - 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.00E-51
7.40E-21
2.30E-05
WP_008499965.1 148183 147895 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
2.80E-29
3.40E-07
2.60E-04
WP_008499966.1 150027 148353 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
9.60E-99
8.90E-12
9.90E-07
WP_265204833.1 150822 150138 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.80E-85
6.70E-08
5.60E-05
3.40E-04
8.60E-04
WP_032639263.1 152291 151007 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.70E-153
WP_032639261.1 153449 152360 - 362PF00266Aminotran_5Aminotransferase class-V1.30E-71
WP_032639259.1 154304 153611 - 230PF04239DUF421Protein of unknown function (DUF421)1.70E-15
WP_032639257.1 154431 156192 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.50E-86
1.00E-67
WP_008499974.1 156598 157456 + 285PF01226Form_Nir_transFormate/nitrite transporter1.20E-74
WP_032639255.1 157507 159790 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-208
5.10E-44
WP_010429226.1 159993 160734 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.20E-33
1.60E-18
2.90E-06
WP_032639253.1 161291 160769 - 173NO PFAM MATCH---
WP_045261768.1 162563 161414 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
7.90E-28
1.90E-11
1.10E-05
1.30E-04
WP_032639249.1 163702 162838 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.80E-115
WP_032639247.1 164321 163703 - 205PF13247
PF00037
PF12797
PF13187
PF12838
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.00E-27
5.40E-13
6.60E-13
2.90E-12
6.40E-11
WP_032639244.1 166776 164331 - 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
8.10E-109
1.30E-28
1.90E-18

Results for WP_070437619.1 [Streptococcus salivarius] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_149561034.1 131663 131822 + 52PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.70E-10
WP_149561034.1 131872 132031 + 52PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.70E-10
WP_149561034.1 132081 132240 + 52PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.70E-10
WP_149561034.1 132290 132449 + 52PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.70E-10
WP_149561034.1 132499 132658 + 52PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.70E-10
WP_149561034.1 132708 132867 + 52PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.70E-10
WP_076611514.1 132879 134158 + 426INFERRED GENE---
WP_070437622.1 134816 135593 + 258NO PFAM MATCH---
WP_070437619.1 135589 137320 + 576PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-40
WP_070437614.1 137345 138188 + 280PF00005
PF13304
PF02463
PF13604
PF19263
ABC_tran
AAA_21
SMC_N
AAA_30
DUF5906
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
Family of unknown function (DUF5906)
3.20E-26
6.60E-14
1.30E-05
1.30E-04
1.70E-04
WP_070437611.1 138187 138907 + 239PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.80E-07
5.20E-07
WP_149561036.1 138906 140001 + 364PF01546Peptidase_M20Peptidase family M20/M25/M401.10E-15
WP_245085454.1 139981 142513 + 843PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus6.90E-11
WP_070437603.1 142530 143607 + 358NO PFAM MATCH---
WP_149561038.1 143607 144135 + 175NO PFAM MATCH---
WP_149561039.1 144112 145792 + 559PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.20E-65
WP_149561040.1 145798 146707 + 302PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.10E-33

Results for WP_066387324.1 [[Arcobacter] porcinus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_066173455.1 656323 655870 - 150NO PFAM MATCH---
WP_066387333.1 656522 657989 + 488PF03062
PF13813
MBOAT
MBOAT_2
MBOAT, membrane-bound O-acyltransferase family
Membrane bound O-acyl transferase family
1.40E-37
3.50E-08
WP_066178898.1 657998 659108 + 369NO PFAM MATCH---
WP_066387332.1 660559 659128 - 476PF07992
PF02852
PF00070
PF13738
PF12831
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
4.40E-56
1.30E-30
1.10E-11
1.40E-08
3.70E-08
WP_066173467.1 662227 660571 - 551PF00198
PF00364
PF02817
PF13533
PF01597
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
GCV_H
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
Glycine cleavage H-protein
4.40E-77
2.00E-28
7.10E-13
3.60E-10
1.00E-05
WP_066173470.1 664910 662237 - 890PF17831
PF00456
PDH_E1_M
Transketolase_N
Pyruvate dehydrogenase E1 component middle domain
Transketolase, thiamine diphosphate binding domain
3.70E-109
3.70E-15
WP_066387329.1 665014 665731 + 238PF03099BPL_LplA_LipBBiotin/lipoate A/B protein ligase family1.70E-07
WP_066387326.1 665733 666645 + 303PF04055Radical_SAMRadical SAM superfamily9.10E-15
WP_066387324.1 668283 666678 - 534PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.20E-57
9.40E-06
WP_066387317.1 668424 669126 + 233PF03473MOSCMOSC domain5.90E-18
WP_066387314.1 669137 670316 + 392PF00202Aminotran_3Aminotransferase class-III1.90E-84
WP_066387310.1 671545 670372 - 390PF03594
PF16983
BenE
MFS_MOT1
Benzoate membrane transport protein
Molybdate transporter of MFS superfamily
1.20E-133
1.50E-06
WP_066387308.1 671753 672236 + 160PF00075RNase_HRNase H2.10E-12
WP_066387306.1 672344 673163 + 272PF08238
PF13176
PF13424
PF07719
PF00515
Sel1
TPR_7
TPR_12
TPR_2
TPR_1
Sel1 repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.00E-49
1.70E-15
5.60E-12
1.40E-11
1.30E-10
WP_066387304.1 674185 673354 - 276PF01035
PF00165
PF12833
DNA_binding_1
HTH_AraC
HTH_18
6-O-methylguanine DNA methyltransferase, DNA binding domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain
2.60E-27
1.60E-18
9.30E-15
WP_066387301.1 675465 674202 - 420PF00464
PF01212
PF01041
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Serine hydroxymethyltransferase
Beta-eliminating lyase
DegT/DnrJ/EryC1/StrS aminotransferase family
6.40E-169
4.40E-06
7.20E-05
WP_066173906.1 675856 675541 - 104PF19669DUF6172Family of unknown function (DUF6172)2.40E-27

Results for WP_023234775.1 back to top

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Couldn't process WP_023234775.1 Genbank filestream. May be corrupt.

Results for WP_013242479.1 [Corynebacterium pseudotuberculosis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014300883.1 147493 148168 + 224PF00924MS_channelMechanosensitive ion channel3.70E-38
WP_013242471.1 148190 148583 + 130PF01152Bac_globinBacterial-like globin3.90E-34
WP_013242472.1 148594 149491 + 298PF04657DMT_YdcZPutative inner membrane exporter, YdcZ6.30E-70
WP_250544460.1 150052 149494 - 185NO PFAM MATCH---
WP_013242474.1 150537 150108 - 142PF13279
PF03061
PF01643
4HBT_2
4HBT
Acyl-ACP_TE
Thioesterase-like superfamily
Thioesterase superfamily
Acyl-ACP thioesterase
3.60E-16
3.20E-10
1.40E-08
WP_250544461.1 152392 150742 - 549PF00005
PF13304
PF12848
PF02463
PF13555
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
8.80E-54
1.60E-17
2.20E-16
4.20E-09
2.30E-06
WP_013242476.1 153163 152602 - 186PF00436SSBSingle-strand binding protein family9.10E-13
WP_014300886.1 153691 155446 + 584NO PFAM MATCH---
WP_013242479.1 155442 156981 + 512PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-56
WP_013242480.1 157007 158486 + 492PF00881NitroreductaseNitroreductase family6.40E-09
WP_014522248.1 158482 161086 + 867PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.90E-11
WP_013242482.1 161085 162099 + 337PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.60E-86
WP_013242483.1 162095 163076 + 326NO PFAM MATCH---
WP_014300888.1 163114 163291 + 58NO PFAM MATCH---
WP_013242484.1 163363 164815 + 483PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-43
WP_013242485.1 165595 164836 - 252NO PFAM MATCH---
WP_013242486.1 166515 165591 - 307PF00005
PF13304
PF02463
PF13732
PF13555
ABC_tran
AAA_21
SMC_N
DUF4162
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
Domain of unknown function (DUF4162)
P-loop containing region of AAA domain
1.90E-29
6.10E-14
2.30E-05
1.10E-04
4.90E-04

Results for WP_005687300.1 back to top

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Couldn't process WP_005687300.1 Genbank filestream. May be corrupt.

Results for WP_000193004.1 [Bacillus cereus group sp. TH243-1LC] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000650060.1 36196 36982 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
6.60E-06
2.60E-05
6.40E-04
WP_061403188.1 37001 38237 + 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
2.40E-23
7.10E-06
1.50E-04
WP_000336279.1 38705 38276 - 142NO PFAM MATCH---
WP_071679304.1 38904 40239 + 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
2.10E-64
2.30E-20
6.00E-17
5.00E-15
3.40E-10
WP_071679305.1 40338 40827 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.20E-11
3.10E-07
1.20E-05
WP_000996805.1 40973 41384 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.10E-51
WP_071679306.1 42005 41414 - 196PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.30E-17
1.80E-16
1.90E-15
7.10E-11
1.20E-10
WP_071679307.1 43638 42096 - 513PF00881NitroreductaseNitroreductase family5.20E-12
WP_000193004.1 45603 43653 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-83
WP_270682645.1 47519 45599 - 639NO PFAM MATCH---
WP_000569898.1 48904 47644 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_000197145.1 51907 49039 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.60E-63
5.10E-55
1.00E-36
WP_000428506.1 52732 52942 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_001109924.1 52944 53322 + 125NO PFAM MATCH---
WP_001178301.1 53350 53533 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001036565.1 53667 54027 + 119NO PFAM MATCH---
WP_001195379.1 54045 54315 + 89NO PFAM MATCH---

Results for WP_001530487.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_034138271.1 [Pseudomonas rhodesiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_034138279.1 108323 108803 + 159PF13671
PF13238
AAA_33
AAA_18
AAA domain
AAA domain
9.90E-28
4.40E-05
WP_231980915.1 108805 109594 + 262PF01909
PF18765
NTP_transf_2
Polbeta
Nucleotidyltransferase domain
Polymerase beta, Nucleotidyltransferase
1.50E-07
1.30E-05
WP_034138277.1 111524 109583 - 646PF00015
PF02743
PF00672
PF17201
MCPsignal
dCache_1
HAMP
Cache_3-Cache_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
Cache 3/Cache 2 fusion domain
1.10E-39
5.00E-27
5.70E-10
1.70E-04
WP_034138276.1 115680 111672 - 1335PF00384
PF01568
PF00667
PF00258
PF04879
Molybdopterin
Molydop_binding
FAD_binding_1
Flavodoxin_1
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
FAD binding domain
Flavodoxin
Molybdopterin oxidoreductase Fe4S4 domain
1.60E-71
8.00E-33
3.90E-30
3.00E-27
5.50E-19
WP_034138275.1 116188 118750 + 853PF07992
PF01077
PF00070
PF03460
PF04324
Pyr_redox_2
NIR_SIR
Pyr_redox
NIR_SIR_ferr
Fer2_BFD
Pyridine nucleotide-disulphide oxidoreductase
Nitrite and sulphite reductase 4Fe-4S domain
Pyridine nucleotide-disulphide oxidoreductase
Nitrite/Sulfite reductase ferredoxin-like half domain
BFD-like [2Fe-2S] binding domain
8.20E-47
4.20E-19
6.60E-14
1.30E-11
9.70E-11
WP_034138274.1 118749 119115 + 121PF13806Rieske_2Rieske-like [2Fe-2S] domain3.40E-35
WP_034138273.1 119942 121346 + 467NO PFAM MATCH---
WP_034138272.1 122954 121388 - 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
9.80E-48
3.50E-13
9.90E-11
4.30E-10
2.00E-04
WP_034138271.1 123116 125315 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.30E-74
6.50E-70
3.40E-08

Results for WP_010565468.1 [Pseudomonas extremaustralis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010565478.1 76648 75871 - 258PF00005
PF12399
PF13304
PF13604
PF03193
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_30
RsgA_GTPase
ABC transporter
Branched-chain amino acid ATP-binding cassette transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
RsgA GTPase
1.10E-28
2.10E-11
2.90E-05
9.80E-05
6.90E-04
WP_010565477.1 77711 76631 - 359PF00501AMP-bindingAMP-binding enzyme1.40E-13
WP_010565476.1 78100 78607 + 168NO PFAM MATCH---
WP_010565475.1 78606 79425 + 272PF13469
PF00685
Sulfotransfer_3
Sulfotransfer_1
Sulfotransferase family
Sulfotransferase domain
2.30E-16
2.90E-10
WP_081480370.1 79468 82585 + 1038PF03797
PF13018
Autotransporter
ESPR
Autotransporter beta-domain
Extended Signal Peptide of Type V secretion system
1.30E-42
6.00E-12
WP_010565471.1 82589 83450 + 286PF12146Hydrolase_4Serine aminopeptidase, S332.30E-06
WP_010565470.1 83439 83634 + 64NO PFAM MATCH---
WP_010565469.1 85251 83685 - 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
7.10E-49
1.20E-13
2.40E-10
4.80E-10
7.50E-05
WP_010565468.1 85414 87613 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-74
1.00E-70
2.80E-08
WP_010565467.1 88376 87659 - 238PF00005
PF13304
PF13191
PF03215
ABC_tran
AAA_21
AAA_16
Rad17
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
Rad17 P-loop domain
2.70E-30
7.00E-06
1.60E-04
7.90E-04
WP_010565466.1 89200 88372 - 275PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component2.40E-24
WP_010565465.1 90182 89210 - 323PF09084
PF12974
PF13379
PF00497
PF16868
NMT1
Phosphonate-bd
NMT1_2
SBP_bac_3
NMT1_3
NMT1/THI5 like
ABC transporter, phosphonate, periplasmic substrate-binding protein
NMT1-like family
Bacterial extracellular solute-binding proteins, family 3
NMT1-like family
1.20E-27
6.30E-09
2.00E-08
1.20E-06
1.10E-05
WP_003173733.1 90503 90719 + 71PF03459TOBETOBE domain4.80E-15
WP_010565464.1 91916 90770 - 381PF00155Aminotran_1_2Aminotransferase class I and II4.50E-32
WP_010565463.1 92096 93821 + 574PF01019G_glu_transpeptGamma-glutamyltranspeptidase6.80E-172
WP_010565462.1 94936 93814 - 373PF01494
PF13450
PF01266
PF07992
FAD_binding_3
NAD_binding_8
DAO
Pyr_redox_2
FAD binding domain
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
7.90E-24
3.20E-05
2.10E-04
7.20E-04
WP_231998139.1 94978 95452 + 157PF12802
PF01047
PF13463
MarR_2
MarR
HTH_27
MarR family
MarR family
Winged helix DNA-binding domain
2.50E-13
2.10E-09
4.80E-08

Results for WP_005540205.1 [Aggregatibacter actinomycetemcomitans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005542067.1 910580 910760 + 59NO PFAM MATCH---
WP_005542066.1 912812 911588 - 407PF00480
PF01047
ROK
MarR
ROK family
MarR family
2.20E-66
1.00E-05
WP_005542063.1 914178 912873 - 434PF05201
PF01488
PF00745
GlutR_N
Shikimate_DH
GlutR_dimer
Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate / quinate 5-dehydrogenase
Glutamyl-tRNAGlu reductase, dimerisation domain
6.20E-48
5.90E-44
2.80E-20
WP_005542061.1 915065 914363 - 233PF16123
PF00753
PF12706
HAGH_C
Lactamase_B
Lactamase_B_2
Hydroxyacylglutathione hydrolase C-terminus
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.80E-17
1.80E-14
6.20E-05
WP_005542060.1 915085 915784 + 232PF08241
PF13489
PF13649
Methyltransf_11
Methyltransf_23
Methyltransf_25
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.20E-08
5.50E-06
3.70E-04
WP_005556599.1 915841 917334 + 497INFERRED GENE---
WP_005540212.1 917860 917521 - 112PF07411DUF1508Domain of unknown function (DUF1508)1.40E-40
WP_061866523.1 918035 919241 + 401PF20511
PF07883
PMI_typeI_cat
Cupin_2
Phosphomannose isomerase type I, catalytic domain
Cupin domain
8.00E-31
3.10E-06
WP_005540205.1 919336 921100 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.90E-79
1.30E-63
WP_005540203.1 921269 921680 + 136PF06295DUF1043Protein of unknown function (DUF1043)5.00E-43
WP_005540201.1 921870 923253 + 460PF13365
PF00595
PF13180
PF02163
PF17820
Trypsin_2
PDZ
PDZ_2
Peptidase_M50
PDZ_6
Trypsin-like peptidase domain
PDZ domain
PDZ domain
Peptidase family M50
PDZ domain
3.10E-31
4.80E-30
6.00E-24
1.30E-23
1.60E-23
WP_005540199.1 924514 923443 - 356PF01389
PF00691
PF13505
PF09476
OmpA_membrane
OmpA
OMP_b-brl
Pilus_CpaD
OmpA-like transmembrane domain
OmpA family
Outer membrane protein beta-barrel domain
Pilus biogenesis CpaD protein (pilus_cpaD)
4.40E-62
1.80E-25
4.40E-18
7.70E-04
WP_005540197.1 926783 924740 - 680PF17757
PF12344
PF00271
PF04851
PF02151
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
UvrB interaction domain
Ultra-violet resistance protein B
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
UvrB/uvrC motif
2.50E-33
2.10E-20
9.10E-19
1.10E-11
7.00E-08
WP_005551275.1 928426 927394 - 343PF03824NicOHigh-affinity nickel-transport protein4.70E-48
WP_005540191.1 929106 928440 - 221PF06226DUF1007Protein of unknown function (DUF1007)4.40E-49
WP_005594265.1 929484 931155 + 556PF00005
PF12848
PF13304
PF02463
PF01926
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
ABC transporter
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
8.60E-60
3.80E-16
7.30E-16
3.70E-08
1.70E-06
WP_005540188.1 932146 931258 - 295PF03895
PF19220
YadA_anchor
Crescentin
YadA-like membrane anchor domain
Crescentin protein
9.60E-14
7.40E-04

Results for WP_038981416.1 [Enterobacter cloacae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058682857.1 71596 74041 + 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
4.40E-109
1.80E-28
8.00E-18
WP_013097316.1 74051 74669 + 205PF13247
PF12797
PF00037
PF13187
PF12838
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
2.00E-28
5.60E-13
1.00E-12
1.80E-12
7.60E-11
WP_058682858.1 74670 75534 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)5.80E-117
WP_013097314.1 75808 76957 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
5.20E-27
4.40E-12
1.90E-05
7.70E-05
WP_040022911.1 77080 77608 + 175PF06823DUF1236Protein of unknown function (DUF1236)4.80E-04
WP_014831281.1 78385 77644 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.20E-32
4.40E-18
2.00E-06
WP_013097311.1 80866 78583 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.70E-207
5.10E-44
WP_013097310.1 81775 80917 - 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-74
WP_038981416.1 83942 82181 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-84
6.60E-68
WP_058682859.1 84070 84763 + 230PF04239DUF421Protein of unknown function (DUF421)7.40E-16
WP_058682860.1 84925 86014 + 362PF00266Aminotran_5Aminotransferase class-V5.80E-73
WP_058682861.1 86082 87366 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-151
WP_013097305.1 87551 88235 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.70E-85
4.70E-08
5.80E-05
3.10E-04
9.40E-04
WP_008499966.1 88346 90020 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
9.60E-99
8.90E-12
9.90E-07
WP_003858233.1 90190 90478 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
5.20E-29
2.40E-07
5.00E-04
WP_270301636.1 90692 92957 + 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
4.80E-52
6.60E-20
1.90E-05
WP_270301638.1 92993 94742 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
1.10E-60
4.40E-37
7.50E-10
9.40E-06
1.30E-04

Results for WP_034104973.1 [Pseudomonas lurida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_034104989.1 492255 492792 + 178PF13238
PF13671
PF01202
AAA_18
AAA_33
SKI
AAA domain
AAA domain
Shikimate kinase
9.80E-05
3.90E-04
8.00E-04
WP_122711585.1 492887 493508 + 206PF01810LysELysE type translocator9.90E-23
WP_034104985.1 493546 493939 + 130PF07366
PF12680
SnoaL
SnoaL_2
SnoaL-like polyketide cyclase
SnoaL-like domain
5.30E-37
1.20E-17
WP_034104983.1 493973 494453 + 159PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase4.20E-45
WP_238354282.1 494598 495969 + 456NO PFAM MATCH---
WP_034104979.1 496262 497126 + 287PF00701DHDPSDihydrodipicolinate synthetase family1.20E-52
WP_105162345.1 497242 498619 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
1.30E-64
2.90E-16
WP_155003815.1 498615 499782 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme2.00E-149
WP_034104973.1 502101 499902 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.10E-75
6.70E-71
4.10E-08
WP_122767753.1 502264 503830 + 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
1.40E-49
1.00E-12
5.60E-09
5.90E-09
5.40E-04
WP_034104970.1 503957 504578 + 206PF01810LysELysE type translocator7.10E-30
WP_034104968.1 505307 504650 - 218PF13578
PF01596
Methyltransf_24
Methyltransf_3
Methyltransferase domain
O-methyltransferase
2.10E-13
4.30E-12
WP_187515886.1 505418 506051 + 210PF17923
PF00440
PF17918
TetR_C_18
TetR_N
TetR_C_15
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
1.90E-36
1.90E-14
4.20E-07
WP_105162350.1 506079 506880 + 266PF05076SUFUSuppressor of fused protein (SUFU)6.10E-08
WP_069023663.1 507557 507125 - 143PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily2.80E-04
WP_187515924.1 509422 507793 - 542PF00015
PF12729
PF00672
PF02203
MCPsignal
4HB_MCP_1
HAMP
TarH
Methyl-accepting chemotaxis protein (MCP) signalling domain
Four helix bundle sensory module for signal transduction
HAMP domain
Tar ligand binding domain homologue
2.70E-42
1.30E-22
5.70E-08
7.30E-08
WP_034104961.1 509884 509665 - 72NO PFAM MATCH---

Results for WP_040450622.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_038995803.1 [Pseudomonas putida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_052251521.1 2097663 2096550 - 370PF00072
PF01966
PF13487
Response_reg
HD
HD_5
Response regulator receiver domain
HD domain
HD domain
3.40E-25
8.80E-19
3.90E-18
WP_052251523.1 2098073 2097728 - 114PF03992ABMAntibiotic biosynthesis monooxygenase1.80E-14
WP_224793793.1 2098282 2099260 + 325NO PFAM MATCH---
WP_224793792.1 2099256 2099784 + 175NO PFAM MATCH---
WP_052251524.1 2102207 2099771 - 811PF00593
PF07715
PF07660
TonB_dep_Rec
Plug
STN
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Secretin and TonB N terminus short domain
3.00E-54
1.90E-18
5.30E-08
WP_038995800.1 2103284 2102315 - 322PF16220
PF04773
DUF4880
FecR
Domain of unknown function (DUF4880)
FecR protein
3.00E-13
2.30E-06
WP_038995801.1 2103784 2103280 - 167PF08281
PF04542
PF04545
PF07638
PF13384
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Sigma-70, region 4
Sigma-70 region 2
Sigma-70, region 4
ECF sigma factor
Homeodomain-like domain
6.10E-14
7.20E-13
5.60E-06
6.60E-06
3.50E-04
WP_038995802.1 2104756 2103943 - 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
1.00E-20
1.40E-20
1.10E-14
2.60E-13
1.20E-08
WP_038995803.1 2107125 2104920 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.90E-76
4.10E-71
4.90E-08
WP_008070768.1 2107302 2107467 + 55INFERRED GENE---
WP_052251525.1 2108009 2107529 - 159PF08896DUF1842Domain of unknown function (DUF1842)5.00E-33
WP_038995804.1 2108628 2108028 - 199PF08896DUF1842Domain of unknown function (DUF1842)4.70E-34
WP_038995805.1 2109807 2108991 - 271NO PFAM MATCH---
WP_038995806.1 2110129 2110549 + 139NO PFAM MATCH---
WP_038995807.1 2110545 2110833 + 95PF01337BarstarBarstar (barnase inhibitor)2.00E-19
WP_038995808.1 2111027 2112704 + 558PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
2.00E-36
1.60E-21
WP_038995809.1 2112853 2115271 + 805PF01011
PF13360
PQQ
PQQ_2
PQQ enzyme repeat
PQQ-like domain
3.40E-41
5.20E-16

Results for WP_000192983.1 back to top

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Couldn't process WP_000192983.1 Genbank filestream. May be corrupt.

Results for WP_031637724.1 [Pseudomonas aeruginosa] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019396152.1 16193 15494 - 232PF04055
PF13353
Radical_SAM
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
3.40E-14
1.80E-07
WP_003105835.1 16336 16189 - 48PF13597NRDDAnaerobic ribonucleoside-triphosphate reductase1.90E-09
WP_003111559.1 18407 16379 - 675PF13597
PF03477
NRDD
ATP-cone
Anaerobic ribonucleoside-triphosphate reductase
ATP cone domain
3.70E-169
1.20E-20
WP_003088221.1 19374 18564 - 269PF13649
PF04672
PF08242
PF08241
PF13847
Methyltransf_25
Methyltransf_19
Methyltransf_12
Methyltransf_11
Methyltransf_31
Methyltransferase domain
S-adenosyl methyltransferase
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
8.60E-10
7.80E-08
6.00E-06
2.80E-05
4.10E-05
WP_019396805.1 19541 21503 + 653PF00593
PF07715
PF14905
TonB_dep_Rec
Plug
OMP_b-brl_3
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel family
8.80E-62
1.90E-27
2.40E-09
WP_019396806.1 21502 25348 + 1281PF02514CobN-Mg_chelCobN/Magnesium Chelatase1.70E-288
WP_003088234.1 25344 25821 + 158PF01618MotA_ExbBMotA/TolQ/ExbB proton channel family1.20E-06
WP_003088238.1 25820 26147 + 108PF09919DUF2149Uncharacterized conserved protein (DUF2149)1.00E-25
WP_031637724.1 26227 28498 + 756PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.10E-73
6.90E-73
3.40E-08
WP_003139809.1 28630 30931 + 766PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
3.90E-159
7.10E-127
WP_003119171.1 31562 30992 - 189PF13302
PF00583
PF13523
PF13420
Acetyltransf_3
Acetyltransf_1
Acetyltransf_8
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.60E-18
1.50E-06
1.50E-05
8.10E-05
WP_003114923.1 31905 31608 - 98NO PFAM MATCH---
WP_019396808.1 32276 33572 + 431PF00015
PF08448
PF13426
PF08447
PF00989
MCPsignal
PAS_4
PAS_9
PAS_3
PAS
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
6.50E-33
2.70E-28
8.50E-28
7.60E-25
2.00E-18
WP_003088271.1 33741 34254 + 170PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.10E-31
4.10E-07
1.70E-04
WP_003102358.1 34250 35240 + 329PF00941
PF03450
FAD_binding_5
CO_deh_flav_C
FAD binding domain in molybdopterin dehydrogenase
CO dehydrogenase flavoprotein C-terminal domain
2.20E-50
7.80E-16
WP_019396809.1 35236 37441 + 734PF20256
PF02738
PF01315
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
6.80E-51
1.50E-47
1.50E-17
WP_003111130.1 37935 38316 + 126PF14263DUF4354Domain of unknown function (DUF4354)3.80E-50

Results for WP_015343654.1 [Rhizobium tropici] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041678484.1 35278 34378 - 299PF06719
PF12833
PF00165
PF00440
AraC_N
HTH_18
HTH_AraC
TetR_N
AraC-type transcriptional regulator N-terminus
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Bacterial regulatory proteins, tetR family
2.50E-45
1.70E-21
4.60E-12
7.40E-04
WP_085999228.1 35487 36405 + 305PF00248Aldo_ket_redAldo/keto reductase family3.50E-54
WP_015343647.1 37748 36524 - 407PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
1.80E-42
6.50E-09
WP_015343648.1 37941 38592 + 216PF14246
PF00440
PF13384
TetR_C_7
TetR_N
HTH_23
AefR-like transcriptional repressor, C-terminal domain
Bacterial regulatory proteins, tetR family
Homeodomain-like domain
2.00E-20
1.80E-14
2.60E-04
WP_018068484.1 38803 39049 + 82INFERRED GENE---
WP_015343650.1 41505 39165 - 779PF00015
PF00672
MCPsignal
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
1.10E-51
1.00E-11
WP_015343652.1 42598 42376 - 73NO PFAM MATCH---
WP_015343653.1 43408 42703 - 234PF07812TfuATfuA-like protein1.20E-41
WP_015343654.1 44577 43404 - 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-60
WP_015343655.1 44810 44591 - 72NO PFAM MATCH---
WP_041678267.1 46631 44822 - 602PF13414TPR_11TPR repeat5.60E-04
WP_135488172.1 47081 46640 - 146PF12844
PF01381
PF13560
HTH_19
HTH_3
HTH_31
Helix-turn-helix domain
Helix-turn-helix
Helix-turn-helix domain
7.20E-09
3.10E-07
5.30E-05
WP_041678268.1 48160 47260 - 299PF18014
PF13527
PF13673
Acetyltransf_18
Acetyltransf_9
Acetyltransf_10
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.40E-14
5.40E-05
8.10E-05
WP_015343659.1 48394 49519 + 374PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
3.50E-34
1.10E-19
WP_015343660.1 49546 50470 + 307PF02826
PF03446
2-Hacid_dh_C
NAD_binding_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD binding domain of 6-phosphogluconate dehydrogenase
1.40E-45
5.60E-05
WP_015343661.1 50492 50849 + 118PF05899
PF07883
Cupin_3
Cupin_2
EutQ-like cupin domain
Cupin domain
8.10E-23
1.90E-06
WP_015343662.1 51019 52483 + 487PF00171
PF07368
Aldedh
DUF1487
Aldehyde dehydrogenase family
Protein of unknown function (DUF1487)
7.80E-148
7.30E-06

Results for WP_006350677.1 [Streptomyces tsukubensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006350667.1 7540088 7538834 - 417NO PFAM MATCH---
WP_040916946.1 7540241 7541222 + 326PF01497Peripla_BP_2Periplasmic binding protein8.80E-19
WP_130585255.1 7541218 7542265 + 348PF01032FecCDFecCD transport family1.40E-67
WP_006350671.1 7542261 7543272 + 336PF01032FecCDFecCD transport family2.20E-63
WP_015613002.1 7543268 7544196 + 309INFERRED GENE---
WP_006350673.1 7544252 7544393 + 46NO PFAM MATCH---
WP_130585254.1 7544780 7545833 + 350NO PFAM MATCH---
WP_130585253.1 7545829 7547374 + 514PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
1.70E-34
4.20E-22
WP_006350677.1 7547370 7548753 + 460PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-42
WP_130585252.1 7548854 7550138 + 427NO PFAM MATCH---
WP_130585251.1 7550134 7551886 + 583PF00005
PF00664
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
1.50E-31
1.00E-07
2.60E-05
1.60E-04
WP_130585250.1 7551882 7553607 + 574PF00005
PF00664
ABC_tran
ABC_membrane
ABC transporter
ABC transporter transmembrane region
3.40E-24
1.30E-08
WP_006350681.1 7554141 7553661 - 159PF00582UspUniversal stress protein family2.30E-08
WP_006350682.1 7555415 7554149 - 421PF02040
PF03600
ArsB
CitMHS
Arsenical pump membrane protein
Citrate transporter
6.10E-22
3.40E-15
WP_006350683.1 7555599 7556166 + 188PF14124DUF4291Domain of unknown function (DUF4291)1.20E-60
WP_233168746.1 7559893 7556248 - 1214PF00082
PF13620
PF11721
PF13715
PF17210
Peptidase_S8
CarboxypepD_reg
Malectin
CarbopepD_reg_2
SdrD_B
Subtilase family
Carboxypeptidase regulatory-like domain
Malectin domain
CarboxypepD_reg-like domain
SdrD B-like domain
4.80E-43
1.00E-30
3.90E-25
2.00E-23
3.20E-07
WP_006350685.1 7561114 7560175 - 312PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.20E-17
1.20E-06

Results for WP_006347379.1 [Streptomyces tsukubensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006347371.1 3667586 3667130 - 151PF01037
PF13404
PF13412
PF12802
PF12840
AsnC_trans_reg
HTH_AsnC-type
HTH_24
MarR_2
HTH_20
Lrp/AsnC ligand binding domain
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Helix-turn-helix domain
4.90E-19
4.00E-17
3.00E-14
7.90E-07
3.60E-05
WP_040914965.1 3668447 3667739 - 235PF02441FlavoproteinFlavoprotein7.40E-16
WP_040914966.1 3669096 3668535 - 186PF05685Uma2Putative restriction endonuclease1.30E-21
WP_006347374.1 3670069 3669139 - 309PF01040UbiAUbiA prenyltransferase family8.30E-49
WP_006347375.1 3671511 3670065 - 481PF01977UbiD3-octaprenyl-4-hydroxybenzoate carboxy-lyase5.20E-160
WP_006347376.1 3671599 3671968 + 122PF13396PLDc_NPhospholipase_D-nuclease N-terminal1.40E-11
WP_233168880.1 3672978 3671973 - 334PF07479
PF01210
PF20618
PF02558
PF03807
NAD_Gly3P_dh_C
NAD_Gly3P_dh_N
GPD_NAD_C_bact
ApbA
F420_oxidored
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Bacterial GPD, NAD-dependent C-terminal
Ketopantoate reductase PanE/ApbA
NADP oxidoreductase coenzyme F420-dependent
3.50E-53
2.60E-48
8.10E-23
2.40E-10
1.90E-08
WP_045852909.1 3673823 3673013 - 269PF08241
PF13649
PF13489
PF13847
PF08242
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.80E-17
3.00E-15
1.70E-14
1.10E-12
2.70E-09
WP_006347379.1 3674964 3673815 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-51
WP_006347380.1 3676145 3674960 - 394PF07812TfuATfuA-like protein1.40E-41
WP_006347381.1 3676595 3676409 - 61PF04149DUF397Domain of unknown function (DUF397)3.10E-22
WP_078902188.1 3677485 3676591 - 297PF19054
PF13560
PF01381
DUF5753
HTH_31
HTH_3
Domain of unknown function (DUF5753)
Helix-turn-helix domain
Helix-turn-helix
5.30E-44
5.10E-10
1.60E-05
WP_006347383.1 3678738 3677652 - 361PF01578Cytochrom_C_asmCytochrome C assembly protein3.60E-44
WP_006347384.1 3680570 3678734 - 611PF05140ResBResB-like family3.50E-129
WP_040914981.1 3681346 3680575 - 256PF02683
PF13386
DsbD
DsbD_2
Cytochrome C biogenesis protein transmembrane region
Cytochrome C biogenesis protein transmembrane region
1.20E-49
8.00E-08
WP_006347386.1 3681959 3681359 - 199PF00578
PF08534
PF13905
PF00085
AhpC-TSA
Redoxin
Thioredoxin_8
Thioredoxin
AhpC/TSA family
Redoxin
Thioredoxin-like
Thioredoxin
2.30E-21
5.70E-21
1.20E-09
9.90E-07
WP_040914983.1 3683336 3682046 - 429NO PFAM MATCH---

Results for WP_023234775.1 back to top

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Couldn't process WP_023234775.1 Genbank filestream. May be corrupt.

Results for WP_001530487.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_048591378.1 [Salmonella enterica subsp. enterica serovar Napoli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076611657.1 0 737 + 245INFERRED GENE---
WP_000167332.1 1134 849 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 2963 1289 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3760 3076 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_048591377.1 4694 3932 - 253PF01435Peptidase_M48Peptidase family M484.40E-26
WP_000445201.1 6120 4836 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-148
WP_000079590.1 7278 6189 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 8156 7463 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_048591378.1 8292 10053 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.20E-82
2.30E-64

Results for WP_000194821.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_262944308.1 74735 72470 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
9.00E-14
5.00E-07
WP_000167332.1 75249 74964 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 77078 75404 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 77875 77191 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 78809 78047 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_020898601.1 80235 78951 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-149
WP_020898600.1 81394 80305 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 82272 81579 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000194821.1 82408 84169 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-82
3.30E-65
WP_000642539.1 84573 85431 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 85490 87773 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_020898599.1 88804 87844 - 319PF11047SopDSalmonella outer protein D5.90E-178
NP_459946.1 88991 89272 + 93INFERRED GENE---
WP_000067928.1 89390 90188 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 91902 90480 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109272.1 93268 92119 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_023217513.1 94481 93617 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.30E-118

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_024157329.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024157330.1 553104 550839 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.50E-53
1.40E-14
5.00E-07
WP_000167332.1 553618 553333 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 555447 553773 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 556244 555560 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 557178 556416 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_023203924.1 558604 557320 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)8.20E-149
WP_000079590.1 559762 558673 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 560640 559947 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_024157329.1 560776 562537 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.10E-82
3.30E-65
WP_000642539.1 562941 563799 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 563858 566141 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_024157328.1 567172 566212 - 319PF11047SopDSalmonella outer protein D2.20E-178
NP_459946.1 567302 567639 + 112INFERRED GENE---
WP_000067928.1 567757 568555 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 570269 568847 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 571635 570486 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534681.1 572848 571984 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_001652482.1 back to top

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Couldn't process WP_001652482.1 Genbank filestream. May be corrupt.

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001530487.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_000194821.1 back to top

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Couldn't process WP_000194821.1 Genbank filestream. May be corrupt.

Results for WP_001538156.1 back to top

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Couldn't process WP_001538156.1 Genbank filestream. May be corrupt.

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023220172.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_080102595.1 2896652 2894387 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.00E-54
1.40E-14
1.60E-07
WP_000167332.1 2897166 2896881 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_023220171.1 2898995 2897321 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.20E-100
5.00E-11
4.60E-07
WP_000125007.1 2899792 2899108 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 2900726 2899964 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_001528800.1 2902152 2900868 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-149
WP_000079585.1 2903311 2902222 - 362PF00266Aminotran_5Aminotransferase class-V1.90E-70
WP_000642868.1 2904189 2903496 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023220172.1 2904325 2906086 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.80E-82
6.20E-65
WP_000642539.1 2906490 2907348 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 2907407 2909690 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_023220173.1 2910723 2909763 - 319PF11047SopDSalmonella outer protein D3.10E-180
WP_023220174.1 2910965 2911190 + 74NO PFAM MATCH---
WP_023785365.1 2911281 2912106 + 274PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.40E-31
2.30E-18
3.30E-06
WP_001134264.1 2913818 2912396 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 2915184 2914035 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534681.1 2916397 2915533 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_001521452.1 back to top

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Couldn't process WP_001521452.1 Genbank filestream. May be corrupt.

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_050068298.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001727829.1 3032806 3030541 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.30E-14
5.00E-07
WP_000167332.1 3033320 3033035 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 3035149 3033475 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3035946 3035262 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 3036880 3036118 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_023242433.1 3038306 3037022 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.90E-149
WP_024797293.1 3039465 3038376 - 362PF00266Aminotran_5Aminotransferase class-V7.30E-70
WP_000642866.1 3040343 3039650 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_050068298.1 3040479 3042240 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.90E-82
3.30E-65
WP_000642539.1 3042644 3043502 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 3043561 3045844 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_079953602.1 3046870 3045916 - 317PF11047SopDSalmonella outer protein D3.90E-148
NP_459946.1 3047000 3047337 + 112INFERRED GENE---
WP_000067973.1 3047455 3048253 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 3049967 3048545 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_001727823.1 3051333 3050184 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
4.60E-31
1.40E-08
3.10E-07
2.10E-04
WP_057935447.1 3052546 3051682 - 287PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
1.10E-118
8.50E-04

Results for WP_011233085.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_001747674.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023216582.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024147203.1 3081997 3079732 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
8.80E-54
5.30E-15
1.50E-06
WP_000167332.1 3082511 3082226 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 3084340 3082666 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3085137 3084453 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_198889105.1 3086071 3085309 - 253PF01435Peptidase_M48Peptidase family M484.40E-26
WP_023216581.1 3087497 3086213 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.50E-151
WP_000079590.1 3088656 3087567 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 3089534 3088841 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023216582.1 3089670 3091431 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.00E-82
7.40E-65
WP_000642539.1 3091835 3092693 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 3092752 3095035 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_031624605.1 3096066 3095106 - 319PF11047SopDSalmonella outer protein D7.50E-178
WP_077957232.1 3096253 3096523 + 89NO PFAM MATCH---
WP_000067928.1 3096641 3097439 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 3099151 3097729 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_001727823.1 3100517 3099368 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
4.60E-31
1.40E-08
3.10E-07
2.10E-04
WP_000534681.1 3101730 3100866 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_050038117.1 [Haloarcula sp. CBA1122] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961170.1 21252 21105 - 48NO PFAM MATCH---
WP_050007612.1 21311 22031 + 239NO PFAM MATCH---
WP_191449334.1 22518 22035 - 160PF00293NUDIXNUDIX domain3.70E-13
WP_014040444.1 23412 22518 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
4.50E-67
2.10E-35
WP_058990820.1 24075 23487 - 195NO PFAM MATCH---
WP_050038115.1 25406 24158 - 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
2.20E-151
7.30E-08
WP_014040447.1 25559 27647 + 695NO PFAM MATCH---
WP_008309020.1 28018 28836 + 272INFERRED GENE---
WP_050038117.1 28867 30577 + 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-48
WP_014040450.1 31768 30619 - 382PF01889DUF63Membrane protein of unknown function DUF634.50E-35
WP_064288120.1 32710 31870 - 279PF00459Inositol_PInositol monophosphatase family2.70E-46
WP_004518094.1 32983 32782 - 66NO PFAM MATCH---
WP_191449335.1 33102 33282 + 59NO PFAM MATCH---
WP_252718702.1 33877 34381 + 167PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
1.90E-21
2.90E-05
WP_252718703.1 34341 35091 + 249NO PFAM MATCH---
WP_050007609.1 36106 35119 - 328PF18884TSP3_bacBacterial TSP3 repeat1.40E-11
WP_252718704.1 36457 37777 + 439PF01882DUF58Protein of unknown function DUF581.30E-20

Results for WP_016828012.1 [Streptomyces viridosporus T7A] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018839346.1 544110 544301 + 63INFERRED GENE---
WP_171817515.1 544474 544618 + 47NO PFAM MATCH---
WP_016828018.1 545146 544765 - 126NO PFAM MATCH---
WP_016828017.1 545358 545145 - 70NO PFAM MATCH---
WP_223887034.1 546084 545430 - 217NO PFAM MATCH---
WP_078495543.1 547885 546229 - 551PF00005
PF00664
PF02463
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
6.50E-28
8.80E-08
4.30E-05
2.20E-04
WP_026085493.1 549684 547956 - 575PF00005
PF00664
PF02463
PF13191
PF13401
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
2.90E-31
1.90E-10
1.30E-06
1.50E-06
5.90E-04
WP_016828013.1 550850 549680 - 389NO PFAM MATCH---
WP_016828012.1 552199 550849 - 449PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-38
WP_016828011.1 553581 552195 - 461PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
2.50E-31
4.80E-16
WP_063744529.1 554372 553577 - 264NO PFAM MATCH---
WP_016828009.1 554587 554458 - 42NO PFAM MATCH---
WP_016828008.1 555497 554648 - 282PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
4.30E-31
1.50E-06
1.30E-04
1.60E-04
WP_016828007.1 556525 555499 - 341PF01032FecCDFecCD transport family1.20E-67
WP_086019084.1 557484 556521 - 320PF01032FecCDFecCD transport family1.50E-68
WP_026085491.1 558482 557498 - 327PF01497Peripla_BP_2Periplasmic binding protein3.50E-18
WP_016828004.1 558628 559855 + 408NO PFAM MATCH---

Results for WP_055555497.1 [Streptomyces kanamyceticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_055548111.1 6041415 6043080 + 554PF17392
PF01175
PF17391
Urocanase_C
Urocanase
Urocanase_N
Urocanase C-terminal domain
Urocanase Rossmann-like domain
Urocanase N-terminal domain
4.90E-91
7.00E-85
9.00E-61
WP_055548113.1 6043174 6044377 + 400PF01546Peptidase_M20Peptidase family M20/M25/M401.50E-23
WP_055548115.1 6044373 6045735 + 453PF01979Amidohydro_1Amidohydrolase family2.80E-42
WP_055555507.1 6046028 6047201 + 390PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
4.20E-25
2.90E-18
WP_169801301.1 6047313 6047952 + 212PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
5.70E-11
2.20E-10
2.10E-04
WP_055555503.1 6049288 6048205 - 360PF00296Bac_luciferaseLuciferase-like monooxygenase1.00E-55
WP_055555501.1 6050187 6049347 - 279PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.10E-05
WP_055555499.1 6051053 6050183 - 289PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like2.10E-08
WP_055555497.1 6052386 6051030 - 451PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-35
WP_055555495.1 6053419 6052378 - 346NO PFAM MATCH---
WP_055555494.1 6054706 6053440 - 421PF04055Radical_SAMRadical SAM superfamily7.30E-14
WP_055555493.1 6055629 6054702 - 308PF00881NitroreductaseNitroreductase family1.00E-18
WP_055555490.1 6056249 6055625 - 207PF00903
PF18029
Glyoxalase
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
4.10E-05
7.70E-05
WP_157877838.1 6056492 6056321 - 56NO PFAM MATCH---
WP_055555487.1 6056738 6057665 + 308PF00005
PF13304
PF13732
PF02463
ABC_tran
AAA_21
DUF4162
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
RecF/RecN/SMC N terminal domain
1.80E-24
6.40E-11
3.30E-04
7.90E-04
WP_055555485.1 6057666 6058413 + 248PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
1.90E-09
6.90E-07
WP_055555483.1 6059116 6058447 - 222PF00072
PF00196
Response_reg
GerE
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
4.80E-28
7.20E-19

Results for WP_055553439.1 [Streptomyces kanamyceticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_055546548.1 4984962 4984065 - 298PF01694RhomboidRhomboid family2.50E-37
WP_055546556.1 4985639 4985105 - 177PF00160Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD1.70E-42
WP_055546557.1 4985901 4986597 + 231PF17258DUF5324Family of unknown function (DUF5324)9.00E-116
WP_079043882.1 4986818 4988411 + 530PF07690MFS_1Major Facilitator Superfamily7.80E-56
WP_055553446.1 4989784 4988545 - 412PF00067p450Cytochrome P4503.10E-24
WP_157877791.1 4990065 4990209 + 47NO PFAM MATCH---
WP_157877790.1 4990454 4991210 + 251PF00881NitroreductaseNitroreductase family5.80E-16
WP_150493699.1 4991301 4992354 + 350NO PFAM MATCH---
WP_055553439.1 4992353 4993682 + 442PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-42
WP_055553438.1 4993656 4994442 + 261PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like9.30E-09
WP_055553436.1 4994484 4995378 + 297NO PFAM MATCH---
WP_055553434.1 4995407 4996478 + 356PF00296Bac_luciferaseLuciferase-like monooxygenase1.10E-51
WP_055553431.1 4996561 4997272 + 236PF02909
PF00440
TetR_C_1
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
2.10E-18
1.60E-10
WP_157877789.1 4997476 4997302 - 57NO PFAM MATCH---
WP_150493701.1 4998573 4997523 - 349PF00891
PF16864
PF13649
Methyltransf_2
Dimerisation2
Methyltransf_25
O-methyltransferase domain
Dimerisation domain
Methyltransferase domain
1.70E-37
4.10E-05
6.50E-04
WP_150493703.1 4999209 4998840 - 122NO PFAM MATCH---
WP_055553425.1 4999673 5000222 + 182PF13560HTH_31Helix-turn-helix domain9.80E-04

Results for WP_055550599.1 [Streptomyces kanamyceticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_079043710.1 7111271 7112570 + 432PF00201
PF04101
PF13692
UDPGT
Glyco_tran_28_C
Glyco_trans_1_4
UDP-glucoronosyl and UDP-glucosyl transferase
Glycosyltransferase family 28 C-terminal domain
Glycosyl transferases group 1
4.30E-16
8.60E-13
7.40E-05
WP_055550585.1 7112566 7114501 + 644PF00201
PF04101
UDPGT
Glyco_tran_28_C
UDP-glucoronosyl and UDP-glucosyl transferase
Glycosyltransferase family 28 C-terminal domain
8.10E-16
3.70E-12
WP_055550587.1 7114497 7115793 + 431PF00067p450Cytochrome P4504.20E-30
WP_055550589.1 7115831 7117082 + 416PF00201
PF04101
UDPGT
Glyco_tran_28_C
UDP-glucoronosyl and UDP-glucosyl transferase
Glycosyltransferase family 28 C-terminal domain
6.10E-20
1.30E-09
WP_055550591.1 7117078 7118146 + 355PF00483
PF12804
NTP_transferase
NTP_transf_3
Nucleotidyl transferase
MobA-like NTP transferase domain
1.60E-50
1.40E-11
WP_055550593.1 7118142 7119141 + 332PF16363
PF01370
PF07993
PF04321
PF01073
GDP_Man_Dehyd
Epimerase
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
GDP-mannose 4,6 dehydratase
NAD dependent epimerase/dehydratase family
Male sterility protein
RmlD substrate binding domain
3-beta hydroxysteroid dehydrogenase/isomerase family
6.80E-71
6.20E-61
8.70E-16
1.20E-15
6.20E-15
WP_055550595.1 7119231 7120491 + 419PF06722DUF1205Protein of unknown function (DUF1205)2.70E-15
WP_150494221.1 7120640 7122563 + 640NO PFAM MATCH---
WP_055550599.1 7122555 7124565 + 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-80
WP_150494223.1 7124573 7126154 + 526PF00881NitroreductaseNitroreductase family5.80E-12
WP_150494225.1 7126150 7127773 + 540PF00881NitroreductaseNitroreductase family6.80E-05
CP970_RS30820 7127811 7128399 + 196INFERRED GENE---
WP_055555835.1 7128398 7129577 + 392PF01494
PF01266
PF12831
PF04820
PF00890
FAD_binding_3
DAO
FAD_oxidored
Trp_halogenase
FAD_binding_2
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
Tryptophan halogenase
FAD binding domain
1.20E-22
1.50E-12
8.60E-07
2.20E-06
1.80E-05
WP_055555833.1 7130188 7129597 - 196PF00196
PF08281
PF04545
GerE
Sigma70_r4_2
Sigma70_r4
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
5.50E-19
1.30E-07
1.40E-05
WP_055555831.1 7130819 7132133 + 437PF00067p450Cytochrome P4501.20E-25
WP_055555829.1 7132129 7133200 + 356PF00891
PF16864
Methyltransf_2
Dimerisation2
O-methyltransferase domain
Dimerisation domain
1.50E-44
2.10E-07
WP_079044019.1 7133402 7133174 - 75PF00196
PF08281
PF13384
PF13551
PF13560
GerE
Sigma70_r4_2
HTH_23
HTH_29
HTH_31
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
Winged helix-turn helix
Helix-turn-helix domain
2.90E-14
2.90E-09
1.30E-07
7.50E-07
1.20E-06

Results for WP_062842336.1 [Pseudomonas aeruginosa] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_058150324.1 656 275 - 126PF14263DUF4354Domain of unknown function (DUF4354)6.60E-51
WP_003114922.1 2369 1073 - 431PF00015
PF08448
PF13426
PF08447
PF00989
MCPsignal
PAS_4
PAS_9
PAS_3
PAS
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
6.50E-33
2.90E-28
1.20E-27
3.20E-25
1.10E-18
WP_003114923.1 2740 3037 + 98NO PFAM MATCH---
WP_003119171.1 3083 3653 + 189PF13302
PF00583
PF13523
PF13420
Acetyltransf_3
Acetyltransf_1
Acetyltransf_8
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.60E-18
1.50E-06
1.50E-05
8.10E-05
WP_003119172.1 6015 3714 - 766PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
9.30E-159
1.20E-126
WP_062842336.1 8418 6147 - 756PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.10E-73
1.20E-72
3.30E-08
WP_003088238.1 8825 8498 - 108PF09919DUF2149Uncharacterized conserved protein (DUF2149)1.00E-25
WP_003088234.1 9301 8824 - 158PF01618MotA_ExbBMotA/TolQ/ExbB proton channel family1.20E-06
WP_124203096.1 13143 9297 - 1281PF02514CobN-Mg_chelCobN/Magnesium Chelatase3.20E-287
WP_023102109.1 15104 13142 - 653PF00593
PF07715
PF14905
TonB_dep_Rec
Plug
OMP_b-brl_3
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel family
1.10E-61
1.50E-26
1.80E-09
WP_003088221.1 15271 16081 + 269PF13649
PF04672
PF08242
PF08241
PF13847
Methyltransf_25
Methyltransf_19
Methyltransf_12
Methyltransf_11
Methyltransf_31
Methyltransferase domain
S-adenosyl methyltransferase
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
8.60E-10
7.80E-08
6.00E-06
2.80E-05
4.10E-05
M9C63_RS02005 16238 18456 + 739INFERRED GENE---
WP_033983765.1 18452 19151 + 232PF04055
PF13353
Radical_SAM
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
3.20E-14
1.00E-07
WP_031673194.1 19344 20745 + 466PF01266
PF01946
PF07992
PF13450
DAO
Thi4
Pyr_redox_2
NAD_binding_8
FAD dependent oxidoreductase
Thi4 family
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
1.30E-54
2.10E-05
1.30E-04
2.80E-04

Results for WP_003730945.1 back to top

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Couldn't process WP_003730945.1 Genbank filestream. May be corrupt.

Results for WP_060766117.1 [Pseudomonas lactis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_060766117.1 2231 32 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.60E-75
7.90E-71
1.50E-07
WP_056787493.1 2376 2937 + 186PF00857IsochorismataseIsochorismatase family3.90E-36
WP_056787490.1 2951 3995 + 347PF01266
PF07992
PF00890
PF13450
PF13241
DAO
Pyr_redox_2
FAD_binding_2
NAD_binding_8
NAD_binding_7
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
NAD(P)-binding Rossmann-like domain
Putative NAD(P)-binding
6.00E-41
6.80E-07
2.00E-06
2.70E-06
5.00E-05
WP_056787488.1 4450 3991 - 152PF00293NUDIXNUDIX domain1.60E-15
WP_056787485.1 4599 6036 + 478NO PFAM MATCH---
WP_056787484.1 6846 6072 - 257PF01909NTP_transf_2Nucleotidyltransferase domain6.60E-04
WP_056787480.1 7322 6842 - 159PF13671
PF13238
AAA_33
AAA_18
AAA domain
AAA domain
9.20E-27
5.20E-05

Results for WP_069076254.1 [Pseudomonas extremaustralis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_150294947.1 3736710 3737331 + 206PF01810LysELysE type translocator2.60E-24
WP_150294949.1 3737558 3738041 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase3.20E-47
WP_024075779.1 3738211 3739600 + 462NO PFAM MATCH---
WP_150055734.1 3739920 3740784 + 287PF00701DHDPSDihydrodipicolinate synthetase family1.40E-52
WP_150294950.1 3741527 3740825 - 233PF07729
PF00392
PF01325
FCD
GntR
Fe_dep_repress
FCD domain
Bacterial regulatory proteins, gntR family
Iron dependent repressor, N-terminal DNA binding domain
2.30E-19
9.80E-17
5.90E-04
WP_150294952.1 3743326 3741529 - 598PF01425AmidaseAmidase6.80E-90
WP_150294954.1 3743592 3744969 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
1.50E-64
5.00E-16
WP_069076255.1 3744965 3746132 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme5.60E-149
WP_069076254.1 3748616 3746417 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.90E-73
1.80E-71
1.40E-08
WP_024075786.1 3748829 3750395 + 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
1.80E-48
3.80E-13
8.70E-11
3.30E-09
1.30E-05
WP_150294955.1 3750977 3750452 - 174PF00583
PF13673
PF13508
PF14542
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_CG
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
GCN5-related N-acetyl-transferase
2.80E-12
7.40E-11
1.80E-10
2.50E-07
WP_069076252.1 3752420 3751016 - 467NO PFAM MATCH---
WP_102623464.1 3752547 3753126 + 192PF00857IsochorismataseIsochorismatase family8.30E-33
WP_190362362.1 3753798 3753153 - 214PF17918
PF00440
TetR_C_15
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.30E-16
1.30E-10
WP_150294957.1 3753870 3754737 + 288PF00248Aldo_ket_redAldo/keto reductase family8.50E-49
WP_150294959.1 3754937 3756878 + 646PF00015
PF02743
PF00672
MCPsignal
dCache_1
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
2.60E-39
5.70E-27
7.00E-09
WP_150294960.1 3757566 3757086 - 159PF13671
PF13238
PF01712
AAA_33
AAA_18
dNK
AAA domain
AAA domain
Deoxynucleoside kinase
2.30E-27
1.90E-05
2.70E-04

Results for WP_000192959.1 [Bacillus cereus group sp. TH41-1LC] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049772327.1 37723 37408 - 104NO PFAM MATCH---
WP_000101451.1 39385 38029 - 451PF01385
PF07282
OrfB_IS605
OrfB_Zn_ribbon
Probable transposase
Putative transposase DNA-binding domain
2.00E-18
3.00E-06
WP_001178301.1 40090 39907 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109906.1 40496 40118 - 125NO PFAM MATCH---
WP_000428510.1 40708 40498 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_000197153.1 41533 44401 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.90E-63
5.10E-55
6.30E-37
WP_000569908.1 44534 45791 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
3.70E-13
1.60E-04
WP_000067620.1 45915 47835 + 639NO PFAM MATCH---
WP_000192959.1 47831 49781 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-83
WP_001175520.1 49797 51339 + 513PF00881NitroreductaseNitroreductase family6.20E-12
WP_000025740.1 51431 52022 + 196PF13649
PF08241
PF13847
PF13489
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.30E-17
1.00E-16
2.70E-15
1.50E-10
2.20E-10
WP_000996791.1 52465 52054 - 136PF13048DUF3908Protein of unknown function (DUF3908)3.80E-52
WP_000470981.1 53101 52609 - 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.20E-11
3.10E-07
1.20E-05
WP_001110200.1 54538 53203 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
6.70E-64
2.30E-20
4.00E-17
3.30E-15
1.80E-10
WP_000332405.1 54737 55169 + 143NO PFAM MATCH---
WP_017672808.1 55212 55439 + 75INFERRED GENE---
WP_000649878.1 56301 55515 - 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.90E-05
1.20E-04

Results for WP_069076254.1 [Pseudomonas extremaustralis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_150294947.1 3736710 3737331 + 206PF01810LysELysE type translocator2.60E-24
WP_150294949.1 3737558 3738041 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase3.20E-47
WP_024075779.1 3738211 3739600 + 462NO PFAM MATCH---
WP_150055734.1 3739920 3740784 + 287PF00701DHDPSDihydrodipicolinate synthetase family1.40E-52
WP_150294950.1 3741527 3740825 - 233PF07729
PF00392
PF01325
FCD
GntR
Fe_dep_repress
FCD domain
Bacterial regulatory proteins, gntR family
Iron dependent repressor, N-terminal DNA binding domain
2.30E-19
9.80E-17
5.90E-04
WP_150294952.1 3743326 3741529 - 598PF01425AmidaseAmidase6.80E-90
WP_150294954.1 3743592 3744969 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
1.50E-64
5.00E-16
WP_069076255.1 3744965 3746132 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme5.60E-149
WP_069076254.1 3748616 3746417 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.90E-73
1.80E-71
1.40E-08
WP_024075786.1 3748829 3750395 + 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
1.80E-48
3.80E-13
8.70E-11
3.30E-09
1.30E-05
WP_150294955.1 3750977 3750452 - 174PF00583
PF13673
PF13508
PF14542
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_CG
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
GCN5-related N-acetyl-transferase
2.80E-12
7.40E-11
1.80E-10
2.50E-07
WP_069076252.1 3752420 3751016 - 467NO PFAM MATCH---
WP_102623464.1 3752547 3753126 + 192PF00857IsochorismataseIsochorismatase family8.30E-33
WP_190362362.1 3753798 3753153 - 214PF17918
PF00440
TetR_C_15
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.30E-16
1.30E-10
WP_150294957.1 3753870 3754737 + 288PF00248Aldo_ket_redAldo/keto reductase family8.50E-49
WP_150294959.1 3754937 3756878 + 646PF00015
PF02743
PF00672
MCPsignal
dCache_1
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
Cache domain
HAMP domain
2.60E-39
5.70E-27
7.00E-09
WP_150294960.1 3757566 3757086 - 159PF13671
PF13238
PF01712
AAA_33
AAA_18
dNK
AAA domain
AAA domain
Deoxynucleoside kinase
2.30E-27
1.90E-05
2.70E-04

Results for WP_005725885.1 [Lactobacillus crispatus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_151495702.1 1052 62 - 329PF13793
PF14572
PF00156
Pribosyltran_N
Pribosyl_synth
Pribosyltran
N-terminal domain of ribose phosphate pyrophosphokinase
Phosphoribosyl synthetase-associated domain
Phosphoribosyl transferase domain
8.60E-42
2.80E-17
1.30E-09
WP_151495703.1 1889 1142 - 248NO PFAM MATCH---
WP_013085673.1 3102 1866 - 411PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
1.40E-16
2.40E-06
WP_005725885.1 4177 3124 - 350PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.80E-17
WP_151495704.1 4935 4179 - 251NO PFAM MATCH---

Results for WP_050038117.1 [Haloarcula sp. CBA1122] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961170.1 21252 21105 - 48NO PFAM MATCH---
WP_050007612.1 21311 22031 + 239NO PFAM MATCH---
WP_191449334.1 22518 22035 - 160PF00293NUDIXNUDIX domain3.70E-13
WP_014040444.1 23412 22518 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
4.50E-67
2.10E-35
WP_058990820.1 24075 23487 - 195NO PFAM MATCH---
WP_050038115.1 25406 24158 - 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
2.20E-151
7.30E-08
WP_014040447.1 25559 27647 + 695NO PFAM MATCH---
WP_008309020.1 28018 28836 + 272INFERRED GENE---
WP_050038117.1 28867 30577 + 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-48
WP_014040450.1 31768 30619 - 382PF01889DUF63Membrane protein of unknown function DUF634.50E-35
WP_064288120.1 32710 31870 - 279PF00459Inositol_PInositol monophosphatase family2.70E-46
WP_004518094.1 32983 32782 - 66NO PFAM MATCH---
WP_191449335.1 33102 33282 + 59NO PFAM MATCH---
WP_252718702.1 33877 34381 + 167PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
1.90E-21
2.90E-05
WP_252718703.1 34341 35091 + 249NO PFAM MATCH---
WP_050007609.1 36106 35119 - 328PF18884TSP3_bacBacterial TSP3 repeat1.40E-11
WP_252718704.1 36457 37777 + 439PF01882DUF58Protein of unknown function DUF581.30E-20

Results for WP_065171647.1 [Photobacterium damselae subsp. damselae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_264954910.1 757505 757166 - 112PF127294HB_MCP_1Four helix bundle sensory module for signal transduction3.40E-11
WP_264954911.1 758750 757508 - 413PF13343
PF13531
PF13416
PF01547
SBP_bac_6
SBP_bac_11
SBP_bac_8
SBP_bac_1
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
9.20E-22
2.20E-08
1.20E-07
3.80E-07
WP_005298125.1 759463 758962 - 166PF03887YfbUYfbU domain3.00E-70
WP_264954912.1 761582 759827 - 584PF01268FTHFSFormate--tetrahydrofolate ligase1.30E-239
WP_068946116.1 762942 762195 - 248PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.70E-31
2.40E-20
2.00E-06
WP_264954913.1 763251 765147 + 631PF01136
PF12392
Peptidase_U32
DUF3656
Peptidase family U32
Collagenase
3.50E-68
4.60E-23
WP_065171648.1 767729 765455 - 757PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.90E-201
5.20E-43
WP_264954914.1 768661 767788 - 290PF01226Form_Nir_transFormate/nitrite transporter6.30E-77
WP_065171647.1 771011 769262 - 582PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.80E-78
5.90E-66
WP_069530822.1 772028 771221 - 268PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase family5.30E-21
WP_044174852.1 772490 772739 + 82PF04226Transgly_assocTransglycosylase associated protein2.40E-11
WP_264954915.1 774554 772901 - 550PF00072
PF13432
Response_reg
TPR_16
Response regulator receiver domain
Tetratricopeptide repeat
2.90E-13
4.90E-07
WP_264954916.1 776105 777215 + 369PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
1.40E-29
5.10E-16
1.50E-06
WP_264954917.1 777214 780337 + 1040PF00873
PF03176
ACR_tran
MMPL
AcrB/AcrD/AcrF family
MMPL family
9.20E-284
6.10E-18
WP_005298143.1 780514 780822 + 102INFERRED GENE---
WP_264954918.1 780845 781649 + 267PF00359PTS_EIIA_2Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 25.60E-19
WP_106224078.1 781645 782518 + 290PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.40E-20
5.60E-18

Results for WP_004943471.1 [Streptomyces mobaraensis NBRC 13819 = DSM 40847] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004943495.1 7342110 7342512 + 133PF19460DUF5997Family of unknown function (DUF5997)5.70E-53
WP_004943491.1 7342851 7343952 + 366PF00924MS_channelMechanosensitive ion channel3.30E-46
WP_004943488.1 7344174 7346982 + 935PF13191
PF00196
PF08281
AAA_16
GerE
Sigma70_r4_2
AAA ATPase domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
1.10E-13
6.00E-13
1.90E-04
WP_004943486.1 7347293 7347839 + 181NO PFAM MATCH---
WP_004943483.1 7348669 7347859 - 269NO PFAM MATCH---
WP_004943480.1 7350037 7348843 - 397PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.40E-44
WP_004943476.1 7351053 7350033 - 339PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term4.50E-51
WP_004943473.1 7353637 7351039 - 865PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.20E-40
WP_004943471.1 7355596 7353652 - 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-78
WP_004943468.1 7355906 7355723 - 60NO PFAM MATCH---
WP_004943465.1 7357997 7356065 - 643PF00881NitroreductaseNitroreductase family1.50E-14
WP_004943462.1 7359900 7357989 - 636NO PFAM MATCH---
WP_040889396.1 7362502 7360132 - 789PF00704
PF06483
Glyco_hydro_18
ChiC
Glycosyl hydrolases family 18
Chitinase C
2.30E-85
4.20E-73
WP_004943457.1 7362891 7363182 + 96PF04226Transgly_assocTransglycosylase associated protein3.10E-10
WP_004943454.1 7364789 7363547 - 413PF07690
PF12832
MFS_1
MFS_1_like
Major Facilitator Superfamily
MFS_1 like family
2.90E-33
4.10E-11
WP_004943451.1 7365098 7364876 - 73PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductase9.10E-05
J7W19_RS33310 7365190 7365679 + 163INFERRED GENE---

Results for WP_029887310.1 [Pseudomonas juntendi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_029887316.1 10349 8600 - 582PF02028BCCTBCCT, betaine/carnitine/choline family transporter3.70E-177
WP_029887315.1 10663 10981 + 105NO PFAM MATCH---
WP_029887314.1 10988 11186 + 65PF06945DUF1289Protein of unknown function (DUF1289)2.60E-15
WP_064314590.1 11427 12216 + 262PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 32.80E-26
WP_029887313.1 13257 12237 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.20E-35
3.70E-23
WP_029887312.1 14651 13307 - 447PF00034
PF13442
PF09699
Cytochrom_C
Cytochrome_CBB3
Paired_CXXCH_1
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Doubled CXXCH motif (Paired_CXXCH_1)
1.10E-23
1.80E-22
9.30E-04
WP_029887311.1 16918 14668 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
9.00E-35
1.10E-31
WP_009686563.1 17373 16917 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
6.10E-22
3.80E-08
3.00E-05
WP_029887310.1 17616 19803 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.00E-73
7.60E-73
3.50E-08
WP_050492241.1 21539 19811 - 575PF00890
PF01266
PF12831
PF03486
PF07992
FAD_binding_2
DAO
FAD_oxidored
HI0933_like
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
4.10E-100
9.00E-12
1.40E-10
2.70E-07
7.00E-07
WP_029887308.1 21901 21580 - 106PF07978NIPSNAPNIPSNAP1.60E-37
WP_029887307.1 23619 21885 - 577PF00890
PF01266
PF12831
PF03486
PF07992
FAD_binding_2
DAO
FAD_oxidored
HI0933_like
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
1.20E-106
5.60E-12
7.40E-10
1.20E-04
2.80E-04
WP_029887306.1 24433 23623 - 269PF08501
PF00899
Shikimate_dh_N
ThiF
Shikimate dehydrogenase substrate binding domain
ThiF family
4.00E-17
1.20E-04
WP_250169835.1 24586 24981 + 131PF09339HTH_IclRIclR helix-turn-helix domain4.70E-13

Results for WP_015763174.1 [Halomicrobium sp. ZPS1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015763166.1 2768134 2767987 - 48PF09079Cdc6_CCDC6, C terminal winged helix domain1.70E-04
WP_015763167.1 2768192 2768906 + 237NO PFAM MATCH---
WP_015763168.1 2769389 2768906 - 160PF00293NUDIXNUDIX domain2.10E-05
WP_015763169.1 2770284 2769390 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
6.50E-68
8.40E-35
WP_015763170.1 2770922 2770364 - 185NO PFAM MATCH---
WP_015763171.1 2772485 2771210 - 424PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
1.20E-151
8.40E-11
5.50E-05
WP_015763172.1 2772625 2774686 + 686NO PFAM MATCH---
WP_015763173.1 2774880 2775699 + 272PF19138DUF5821Family of unknown function (DUF5821)8.20E-95
WP_015763174.1 2775732 2777466 + 577PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.10E-48
WP_015763175.1 2777572 2778889 + 438NO PFAM MATCH---
WP_015763176.1 2780052 2778885 - 388PF01889DUF63Membrane protein of unknown function DUF631.50E-34
WP_015763177.1 2780978 2780135 - 280PF00459Inositol_PInositol monophosphatase family1.10E-45
WP_015763178.1 2781234 2781036 - 65NO PFAM MATCH---
WP_015763179.1 2781691 2781982 + 96PF13821DUF4187Domain of unknown function (DUF4187)6.90E-04
WP_015763180.1 2782032 2782527 + 164PF03745DUF309Domain of unknown function (DUF309)5.30E-16
WP_015763181.1 2782575 2783370 + 264PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family1.80E-18
WP_015763182.1 2783986 2783524 - 153PF03684UPF0179Uncharacterised protein family (UPF0179)3.10E-46

Results for WP_002211330.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_026111117.1 [Pseudoalteromonas sp. CNC9-20] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022944995.1 48839 49127 + 95NO PFAM MATCH---
WP_239409285.1 49123 50731 + 535PF03929PepSY_TMPepSY-associated TM region1.90E-47
WP_239409286.1 50727 50964 + 78NO PFAM MATCH---
WP_239409287.1 51704 50969 - 244PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
1.90E-56
2.60E-48
1.10E-12
7.60E-05
WP_022944991.1 52671 51744 - 308PF01145Band_7SPFH domain / Band 7 family1.40E-30
WP_239409288.1 53624 52751 - 290PF00753Lactamase_BMetallo-beta-lactamase superfamily1.50E-10
WP_022944989.1 53851 54946 + 364PF00990GGDEFDiguanylate cyclase, GGDEF domain9.00E-43
WP_239409289.1 57201 54942 - 752PF01804Penicil_amidasePenicillin amidase7.90E-126
WP_026111117.1 57354 59115 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.70E-76
1.30E-58
WP_239409290.1 59257 63661 + 1467PF08447
PF02518
PF00072
PF00512
PF03924
PAS_3
HATPase_c
Response_reg
HisKA
CHASE
PAS fold
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
2.00E-31
2.80E-31
4.10E-25
3.20E-18
2.60E-17
WP_151173619.1 63756 64587 + 276PF02540NAD_synthaseNAD synthase8.30E-67
WP_239409291.1 64738 65446 + 235PF13561
PF00106
PF08659
PF01370
PF05368
adh_short_C2
adh_short
KR
Epimerase
NmrA
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NmrA-like family
1.20E-31
4.00E-27
2.70E-09
4.20E-07
3.00E-05
WP_239409292.1 65457 66012 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I1.30E-77
WP_022944982.1 66020 66377 + 118PF02152FolBDihydroneopterin aldolase1.30E-29
WP_026111116.1 66863 66404 - 152PF09335SNARE_assocSNARE associated Golgi protein3.80E-11
WP_045979475.1 67216 66901 - 104PF09685DUF4870Domain of unknown function (DUF4870)8.40E-38
WP_022944979.1 67484 67955 + 156PF11026DUF2721Protein of unknown function (DUF2721)4.60E-30

Results for WP_000197742.1 back to top

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Couldn't process WP_000197742.1 Genbank filestream. May be corrupt.

Results for WP_033432002.1 [Saccharothrix syringae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_033431997.1 7219692 7220157 + 154PF01613Flavin_ReductFlavin reductase like domain7.70E-30
WP_033432103.1 7220977 7220188 - 262PF05630
PF07174
NPP1
FAP
Necrosis inducing protein (NPP1)
Fibronectin-attachment protein (FAP)
5.40E-64
3.50E-04
WP_033431998.1 7224923 7221191 - 1243PF00082Peptidase_S8Subtilase family8.20E-61
WP_211269142.1 7225112 7228466 + 1117PF00754
PF09118
PF13964
PF01344
PF13418
F5_F8_type_C
GO-like_E_set
Kelch_6
Kelch_1
Kelch_4
F5/8 type C domain
Galactose oxidase-like, Early set domain
Kelch motif
Kelch motif
Galactose oxidase, central domain
1.20E-93
7.80E-21
5.10E-19
2.80E-13
1.90E-08
WP_228122280.1 7228706 7230386 + 559PF00082Peptidase_S8Subtilase family1.30E-38
WP_033432000.1 7231069 7231504 + 144PF18029Glyoxalase_6Glyoxalase-like domain7.50E-25
WP_033432001.1 7232516 7231742 - 257PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
3.50E-44
5.90E-12
WP_153278554.1 7232737 7232899 + 53NO PFAM MATCH---
WP_033432002.1 7232915 7235147 + 743PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-97
WP_153278555.1 7235295 7235832 + 178NO PFAM MATCH---
WP_194282951.1 7236107 7238201 + 697PF07730
PF02518
PF09679
HisKA_3
HATPase_c
TraQ
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Type-F conjugative transfer system pilin chaperone (TraQ)
3.90E-31
7.60E-05
2.90E-04
WP_033432004.1 7238946 7238340 - 201PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
6.60E-21
1.40E-15
2.70E-04
WP_033432005.1 7239793 7239010 - 260PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
6.40E-47
9.00E-09
WP_033432006.1 7240747 7240141 - 201PF00072
PF00196
PF19717
Response_reg
GerE
DUF6212
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Family of unknown function (DUF6212)
2.90E-22
4.40E-14
2.70E-04
WP_033432007.1 7240958 7241240 + 93PF01817CM_2Chorismate mutase type II2.50E-13
WP_228122956.1 7241418 7243464 + 681PF03704
PF00931
PF00486
PF13191
PF13401
BTAD
NB-ARC
Trans_reg_C
AAA_16
AAA_22
Bacterial transcriptional activator domain
NB-ARC domain
Transcriptional regulatory protein, C terminal
AAA ATPase domain
AAA domain
7.70E-38
4.70E-11
2.40E-10
1.20E-04
1.80E-04
WP_033432008.1 7243495 7243729 + 77PF01636APHPhosphotransferase enzyme family1.00E-06

Results for WP_017393653.1 [Acinetobacter nosocomialis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017393658.1 80663 81497 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
7.20E-48
4.10E-41
1.00E-12
WP_017393657.1 81520 83044 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.40E-17
8.30E-14
1.70E-12
1.90E-10
2.60E-07
WP_017393656.1 83155 84031 + 291PF04072LCMLeucine carboxyl methyltransferase3.60E-38
WP_025466153.1 85056 84042 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.80E-38
8.90E-15
6.10E-06
WP_017393654.1 85192 86680 + 495PF00743
PF13738
PF13450
PF07992
PF13434
FMO-like
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
5.40E-20
4.70E-17
2.70E-11
2.40E-10
9.00E-09
WP_004709879.1 86724 87579 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3.10E-50
3.60E-36
7.40E-11
WP_002156797.1 87651 88545 + 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
4.20E-56
6.20E-12
1.30E-08
7.50E-06
3.90E-04
WP_004888072.1 88573 90244 + 556PF05199
PF00732
PF01266
PF13450
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
1.20E-17
1.50E-09
2.30E-05
2.60E-05
WP_017393653.1 92509 90310 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.10E-74
5.50E-73
1.80E-08
WP_017393652.1 94042 92761 - 426PF03573OprDouter membrane porin, OprD family4.80E-106
WP_017393651.1 95420 94073 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
1.80E-47
1.90E-25
2.00E-09
WP_017393650.1 95912 96989 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
4.30E-54
8.00E-19
1.40E-05
WP_017393649.1 97001 97946 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
2.20E-12
1.70E-06
WP_079378087.1 98682 97989 - 230PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
1.50E-11
2.20E-11
WP_000252463.1 99247 98788 - 152PF01047
PF12802
PF13412
PF01978
MarR
MarR_2
HTH_24
TrmB
MarR family
MarR family
Winged helix-turn-helix DNA-binding
Sugar-specific transcriptional regulator TrmB
7.20E-10
6.20E-09
3.90E-05
4.80E-04
WP_000411717.1 100550 99317 - 410PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
6.30E-51
2.40E-24
1.20E-10
WP_002040868.1 100797 101637 + 279PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
2.30E-55
9.10E-26

Results for WP_028599329.1 [Paenibacillus sp. B01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_164820112.1 354621 354759 + 45NO PFAM MATCH---
WP_255309619.1 354797 354923 + 41NO PFAM MATCH---
WP_164820113.1 354962 355100 + 45NO PFAM MATCH---
WP_153782599.1 355297 356506 + 402PF02163
PF11667
PF13398
Peptidase_M50
DUF3267
Peptidase_M50B
Peptidase family M50
Putative zincin peptidase
Peptidase M50B-like
1.50E-07
1.10E-04
2.10E-04
WP_028599326.1 356539 357436 + 298PF00005
PF13732
PF13304
ABC_tran
DUF4162
AAA_21
ABC transporter
Domain of unknown function (DUF4162)
AAA domain, putative AbiEii toxin, Type IV TA system
1.00E-26
6.30E-15
3.40E-06
WP_153782600.1 357432 358674 + 413PF12698
PF12679
ABC2_membrane_3
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 family transporter protein
7.20E-46
3.90E-05
WP_153782601.1 358686 359535 + 282PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
5.80E-66
2.40E-52
3.60E-10
WP_153782602.1 359869 360694 + 274PF13649
PF13847
PF08241
PF08242
PF13489
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
7.60E-17
4.90E-15
1.80E-14
3.80E-14
1.40E-12
WP_028599328.1 360690 361281 + 196NO PFAM MATCH---
WP_028599329.1 361277 362657 + 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.00E-69
WP_153782603.1 362727 363498 + 256NO PFAM MATCH---
WP_153782604.1 363494 364031 + 178PF00392GntRBacterial regulatory proteins, gntR family6.00E-17
WP_084137366.1 364279 365200 + 306PF00348polyprenyl_syntPolyprenyl synthetase1.30E-19
WP_153782606.1 365521 365701 + 59PF05952ComXBacillus competence pheromone ComX4.50E-14
WP_153782607.1 365720 368087 + 788PF02518
PF07730
HATPase_c
HisKA_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase
7.40E-09
1.30E-08
WP_028599332.1 368058 368724 + 221PF00072
PF00196
PF08281
PF13518
Response_reg
GerE
Sigma70_r4_2
HTH_28
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Helix-turn-helix domain
1.40E-25
3.50E-16
2.20E-04
2.50E-04
WP_028599333.1 368898 369102 + 67PF00313CSD'Cold-shock' DNA-binding domain5.60E-31
WP_028599334.1 369188 369419 + 76PF14169YdjOCold-inducible protein YdjO1.20E-27

Results for WP_046177777.1 [Streptococcus dysgalactiae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012766763.1 8778 10731 + 650PF00204
PF00986
PF02518
PF01751
PF13589
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
DNA gyrase B
DNA gyrase B subunit, carboxyl terminus
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Toprim domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
5.60E-65
5.10E-30
5.20E-23
9.10E-18
6.60E-04
WP_003054074.1 11080 12805 + 574PF06160EzrASeptation ring formation regulator, EzrA3.20E-186
WP_046177775.1 12937 13606 + 222PF12710
PF00702
PF08282
PF13419
HAD
Hydrolase
Hydrolase_3
HAD_2
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
Haloacid dehalogenase-like hydrolase
3.50E-22
8.60E-13
2.30E-11
5.40E-08
WP_065355254.1 14088 13632 - 151PF07997DUF1694Protein of unknown function (DUF1694)3.10E-30
WP_003050115.1 14312 15620 + 435PF00113
PF03952
PF07476
PF13378
Enolase_C
Enolase_N
MAAL_C
MR_MLE_C
Enolase, C-terminal TIM barrel domain
Enolase, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
Enolase C-terminal domain-like
1.70E-129
1.40E-60
3.20E-07
1.30E-06
WP_012766767.1 16319 16481 + 53NO PFAM MATCH---
WP_268732259.1 16699 17562 + 287PF00881NitroreductaseNitroreductase family3.80E-11
WP_046177187.1 17646 18711 + 354NO PFAM MATCH---
WP_046177777.1 18723 20082 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.40E-43
WP_046177778.1 20056 20731 + 224PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like2.70E-10
WP_015016860.1 20727 21414 + 228PF19393DUF5968Family of unknown function (DUF5968)2.30E-21
WP_046177185.1 21434 22358 + 307PF00005
PF13304
PF03193
ABC_tran
AAA_21
RsgA_GTPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RsgA GTPase
1.70E-33
1.40E-14
2.90E-04
WP_046177779.1 22366 23494 + 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.60E-25
5.30E-20
5.30E-11
WP_046177780.1 23490 24609 + 372PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
2.00E-41
1.20E-19
WP_065355255.1 24963 27789 + 941PF19580
PF03372
PF18942
PF01336
Exo_endo_phos_3
Exo_endo_phos
DUF5689
tRNA_anti-codon
Endonuclease/Exonuclease/phosphatase family
Endonuclease/Exonuclease/phosphatase family
Family of unknown function (DUF5689)
OB-fold nucleic acid binding domain
2.10E-06
1.60E-05
6.00E-05
7.10E-05
WP_046177781.1 28119 28623 + 167PF06177QueTQueT transporter3.20E-33
WP_046177782.1 28769 30728 + 652PF01653
PF03120
PF12826
PF00533
PF14520
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
NAD-dependent DNA ligase adenylation domain
NAD-dependent DNA ligase OB-fold domain
Helix-hairpin-helix motif
BRCA1 C Terminus (BRCT) domain
Helix-hairpin-helix domain
5.70E-115
6.60E-35
1.40E-16
4.60E-14
1.80E-09

Results for WP_003858243.1 back to top

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Couldn't process WP_003858243.1 Genbank filestream. May be corrupt.

Results for WP_000194832.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_062564511.1 [Pseudoalteromonas sp. CnMc7-37] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_253108801.1 197957 196835 - 373PF04116FA_hydroxylaseFatty acid hydroxylase8.80E-32
WP_062564507.1 198584 198140 - 147NO PFAM MATCH---
WP_062564508.1 199714 198709 - 334PF02800
PF00044
PF03447
Gp_dh_C
Gp_dh_N
NAD_binding_3
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Homoserine dehydrogenase, NAD binding domain
2.70E-65
7.00E-37
1.10E-05
WP_054551439.1 200353 199732 - 206PF01081AldolaseKDPG and KHG aldolase4.90E-72
WP_062564509.1 202238 200387 - 616PF00920ILVD_EDDDehydratase family7.90E-157
WP_054561637.1 203683 202669 - 337PF13377
PF00532
PF00356
PF13407
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Bacterial regulatory proteins, lacI family
Periplasmic binding protein domain
2.70E-44
5.20E-25
7.90E-20
3.90E-18
WP_062564510.1 204704 203705 - 332PF02685
PF00480
Glucokinase
ROK
Glucokinase
ROK family
8.40E-106
7.50E-11
WP_055198756.1 205119 206139 + 339PF13377
PF00532
PF13407
PF00356
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
1.20E-31
1.20E-20
2.10E-15
2.20E-15
WP_062564511.1 206331 208518 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.90E-72
7.20E-70
3.60E-09
WP_062564512.1 208700 209420 + 239NO PFAM MATCH---
WP_253108901.1 209824 209428 - 131NO PFAM MATCH---
WP_062564513.1 210284 209879 - 134NO PFAM MATCH---
WP_253108803.1 211310 210482 - 275PF03629SASACarbohydrate esterase, sialic acid-specific acetylesterase3.60E-26
WP_062564515.1 213835 211435 - 799PF09137
PF00723
Glucodextran_N
Glyco_hydro_15
Glucodextranase, domain N
Glycosyl hydrolases family 15
1.20E-78
1.40E-42
WP_055020845.1 215332 213847 - 494PF07690
PF13347
MFS_1
MFS_2
Major Facilitator Superfamily
MFS/sugar transport protein
3.80E-27
5.70E-10
WP_062564516.1 217202 215324 - 625PF00128
PF16657
PF14701
Alpha-amylase
Malt_amylase_C
hDGE_amylase
Alpha amylase, catalytic domain
Maltogenic Amylase, C-terminal domain
Glycogen debranching enzyme, glucanotransferase domain
6.50E-25
1.30E-05
1.90E-05
WP_062564517.1 219144 217293 - 616PF00128
PF09087
PF10438
PF16657
Alpha-amylase
Cyc-maltodext_N
Cyc-maltodext_C
Malt_amylase_C
Alpha amylase, catalytic domain
Cyclomaltodextrinase, N-terminal
Cyclo-malto-dextrinase C-terminal domain
Maltogenic Amylase, C-terminal domain
6.70E-56
1.60E-24
5.00E-21
2.00E-07

Results for WP_062564946.1 [Pseudoalteromonas sp. CnMc7-37] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_062564940.1 208400 211481 + 1026PF00873
PF02355
PF02460
ACR_tran
SecD_SecF
Patched
AcrB/AcrD/AcrF family
Protein export membrane protein
Patched family
1.20E-186
3.00E-07
3.50E-05
WP_054551315.1 212636 213200 + 187PF03695UPF0149Uncharacterised protein family (UPF0149)1.60E-33
WP_062564941.1 213220 214546 + 441PF00557
PF05195
Peptidase_M24
AMP_N
Metallopeptidase family M24
Aminopeptidase P, N-terminal domain
5.00E-63
4.80E-37
WP_130166876.1 214554 215736 + 393PF01494
PF07992
PF05834
PF01266
PF08491
FAD_binding_3
Pyr_redox_2
Lycopene_cycl
DAO
SE
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
Lycopene cyclase protein
FAD dependent oxidoreductase
Squalene epoxidase
5.60E-20
5.00E-08
5.90E-08
1.00E-07
7.80E-07
WP_062564943.1 215732 216899 + 388PF01494
PF08491
PF05834
PF01266
PF07992
FAD_binding_3
SE
Lycopene_cycl
DAO
Pyr_redox_2
FAD binding domain
Squalene epoxidase
Lycopene cyclase protein
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
2.20E-35
4.00E-07
1.10E-06
3.40E-06
3.80E-05
WP_055198117.1 217107 218412 + 434PF07690MFS_1Major Facilitator Superfamily1.10E-13
WP_008137579.1 219410 220293 + 294INFERRED GENE---
WP_130166877.1 221236 221962 + 241PF13181TPR_8Tetratricopeptide repeat6.60E-06
WP_062564946.1 222003 223464 + 486PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-39
WP_062564947.1 223805 224897 + 363PF00899
PF02826
PF09382
ThiF
2-Hacid_dh_C
RQC
ThiF family
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RQC domain
1.20E-15
4.10E-06
5.80E-04
WP_062564948.1 224907 225702 + 264NO PFAM MATCH---
WP_062564949.1 225694 226654 + 319PF00881
PF14512
Nitroreductase
TM1586_NiRdase
Nitroreductase family
Putative TM nitroreductase
7.00E-23
5.60E-04
WP_062564950.1 226666 227365 + 232PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like7.40E-15
WP_062564951.1 227366 228233 + 288PF00005
PF13304
PF13175
ABC_tran
AAA_21
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
3.70E-28
4.60E-11
4.10E-04
WP_062564952.1 228225 229365 + 379PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
7.40E-29
7.20E-16
7.90E-06
WP_062564953.1 229361 230627 + 421PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
3.70E-15
5.10E-14
2.60E-08
WP_062564954.1 230631 231345 + 237PF00005
PF13304
PF02463
PF13191
PF13555
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
P-loop containing region of AAA domain
1.30E-33
7.40E-06
9.10E-06
1.90E-04
7.00E-04

Results for WP_013463710.1 [Pseudoalteromonas sp. 2CM36K] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005493266.1 36417 36722 + 101INFERRED GENE---
WP_013463717.1 36813 37548 + 245INFERRED GENE---
WP_248474627.1 37934 37550 - 127PF01124MAPEGMAPEG family4.80E-18
WP_013463714.1 38177 39059 + 293PF00892EamAEamA-like transporter family1.60E-09
WP_016900225.1 39421 39103 - 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein2.80E-21
WP_248474628.1 40953 39420 - 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
3.80E-32
6.00E-05
WP_036980826.1 41890 41041 - 282PF00753Lactamase_BMetallo-beta-lactamase superfamily1.50E-07
WP_248474629.1 44255 41966 - 762PF01804Penicil_amidasePenicillin amidase6.10E-126
WP_013463710.1 44411 46172 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.30E-78
1.60E-57
WP_013463709.1 46290 49642 + 1117INFERRED GENE---
WP_248474647.1 49689 50322 + 210PF04337DUF480Protein of unknown function, DUF4803.30E-58
WP_248474630.1 50394 51231 + 278PF02540NAD_synthaseNAD synthase3.70E-64
WP_248474631.1 51358 52078 + 239PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
1.00E-27
5.60E-23
1.30E-09
1.30E-05
WP_008108996.1 52101 52656 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I7.30E-77
WP_013463705.1 52659 53016 + 118PF02152FolBDihydroneopterin aldolase1.90E-27
WP_028834877.1 53433 52992 - 146PF09335SNARE_assocSNARE associated Golgi protein5.70E-15
WP_010392586.1 53891 53525 - 121PF09685DUF4870Domain of unknown function (DUF4870)5.70E-39

Results for WP_023195360.1 [Salmonella sp. YP437-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000534681.1 16 880 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119
WP_000109271.1 1229 2378 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_001134264.1 2595 4017 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000067928.1 5107 4309 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 5226 5563 + 112INFERRED GENE---
WP_001647549.1 5693 6647 + 317PF11047SopDSalmonella outer protein D2.10E-148
WP_001292799.1 9001 6718 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 9918 9060 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_023195360.1 12083 10322 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.70E-82
7.40E-65
WP_000642870.1 12219 12912 + 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_000079590.1 13097 14186 + 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_023195361.1 14256 15540 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-149
WP_000792301.1 15682 16444 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 16616 17300 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 17413 19087 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 19242 19527 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_023195362.1 19756 22021 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.40E-53
1.50E-14
5.00E-07

Results for WP_023356641.1 back to top

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Couldn't process WP_023356641.1 Genbank filestream. May be corrupt.

Results for WP_023356641.1 back to top

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Couldn't process WP_023356641.1 Genbank filestream. May be corrupt.

Results for WP_001521452.1 back to top

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Couldn't process WP_001521452.1 Genbank filestream. May be corrupt.

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001549599.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000705799.1 64203 61938 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.00E-53
5.90E-15
1.60E-07
WP_000167332.1 64717 64432 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 66546 64872 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 67343 66659 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 68277 67515 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_031564996.1 69704 68420 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.60E-150
WP_000079590.1 70863 69774 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642870.1 71741 71048 - 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_001549599.1 71877 73638 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-82
1.40E-64
WP_197394329.1 74042 74900 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-75
WP_265280223.1 74959 77242 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-207
4.80E-44
WP_001145566.1 78273 77313 - 319PF11047SopDSalmonella outer protein D1.10E-182
NP_459946.1 78404 78730 + 108INFERRED GENE---
WP_000067928.1 78848 79646 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 81359 79937 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109272.1 82725 81576 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534685.1 83938 83074 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_038393811.1 [Salmonella enterica subsp. enterica serovar Abaetetuba] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000167332.1 421 136 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 2250 576 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3047 2363 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_023207374.1 3981 3219 - 253PF01435Peptidase_M48Peptidase family M484.30E-26
WP_023207375.1 5408 4124 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-150
WP_260796921.1 6567 5478 - 362PF00266Aminotran_5Aminotransferase class-V1.50E-69
WP_000642870.1 7445 6752 - 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_038393811.1 7580 9341 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-81
3.90E-65

Results for WP_070801990.1 [Salmonella enterica subsp. diarizonae serovar 16:z10:e,n,x,z15] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_309009.1 9652 10276 + 208INFERRED GENE---
WP_000109276.1 10587 11736 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-25
9.80E-09
3.80E-07
2.00E-04
WP_070801957.1 11953 13375 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.80E-28
1.00E-13
WP_023247070.1 14312 13514 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.80E-31
2.20E-18
2.80E-06
NP_459946.1 14430 14767 + 112INFERRED GENE---
NP_459947.1 14898 15857 + 319INFERRED GENE---
WP_023247068.1 18212 15929 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.60E-208
4.80E-44
WP_023247067.1 19127 18269 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_070801990.1 21291 19530 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.30E-82
9.30E-65
WP_070801959.1 21427 22120 + 230PF04239DUF421Protein of unknown function (DUF421)1.00E-15
WP_070801960.1 22305 23394 + 362PF00266Aminotran_5Aminotransferase class-V6.20E-69
WP_053509616.1 23464 24748 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-150
WP_000125003.1 24989 25673 + 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-85
1.80E-07
2.50E-04
7.50E-04
WP_000140319.1 25786 27460 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000167332.1 27616 27901 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_053530133.1 28113 30378 + 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
6.70E-52
3.80E-16
1.70E-07
6.40E-04
WP_023247060.1 30414 32163 + 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
1.60E-60
2.00E-36
2.20E-10
1.70E-05
3.30E-05

Results for WP_023258722.1 [Salmonella enterica subsp. enterica serovar Ohio] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023258904.1 20855 21719 + 287PF04976
PF14248
DmsC
DUF4345
DMSO reductase anchor subunit (DmsC)
Domain of unknown function (DUF4345)
8.30E-119
7.20E-04
WP_000109271.1 22068 23217 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_023258905.1 23434 24856 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
8.20E-14
WP_000067928.1 25946 25148 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 26064 26401 + 112INFERRED GENE---
WP_052940807.1 26531 27491 + 319PF11047SopDSalmonella outer protein D2.40E-190
WP_001292799.1 29849 27566 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 30766 29908 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_023258722.1 32931 31170 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.30E-81
3.40E-65
WP_000642868.1 33067 33760 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023258721.1 33945 35034 + 362PF00266Aminotran_5Aminotransferase class-V6.30E-70
WP_001528800.1 35104 36388 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-149
WP_000792301.1 36530 37292 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 37464 38148 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 38261 39935 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 40090 40375 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_023258720.1 40604 42869 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.40E-14
1.80E-06

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001597101.1 back to top

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Couldn't process WP_001597101.1 Genbank filestream. May be corrupt.

Results for WP_001538156.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_024136702.1 [Salmonella enterica subsp. enterica serovar Mississippi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_226567566.1 244 0 - 81PF13518HTH_28Helix-turn-helix domain2.00E-06
WP_000167332.1 641 356 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 2470 796 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3267 2583 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792315.1 4201 3439 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000445203.1 5627 4343 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.60E-149
WP_000079589.1 6786 5697 - 362PF00266Aminotran_5Aminotransferase class-V2.20E-70
WP_000642866.1 7664 6971 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_024136702.1 7800 9561 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.80E-82
3.30E-65
WP_223231476.1 9923 10823 + 299PF01226Form_Nir_transFormate/nitrite transporter4.10E-75
WP_001292799.1 10882 13165 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_001145575.1 14200 13240 - 319PF11047SopDSalmonella outer protein D3.50E-193
WP_077907162.1 14330 14657 + 108NO PFAM MATCH---
WP_000067973.1 14775 15573 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134268.1 17287 15865 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
3.40E-28
8.80E-14
WP_000109271.1 18653 17504 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534681.1 19866 19002 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_023993632.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011233085.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023258043.1 [Salmonella enterica subsp. enterica serovar Bredeney] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023229912.1 404637 402372 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
7.60E-54
1.40E-14
5.00E-07
WP_000167332.1 405151 404866 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 406980 405306 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 407777 407093 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 408711 407949 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_001528800.1 410137 408853 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-149
WP_001604263.1 411296 410207 - 362PF00266Aminotran_5Aminotransferase class-V1.70E-70
WP_000642868.1 412174 411481 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023258043.1 412310 414071 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.50E-82
3.30E-65
WP_000642539.1 414475 415333 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292803.1 415392 417675 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-208
4.80E-44
WP_001145572.1 418706 417746 - 319PF11047SopDSalmonella outer protein D5.90E-180
NP_459946.1 418836 419163 + 109INFERRED GENE---
WP_000067928.1 419281 420079 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_080177693.1 421792 420370 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
8.00E-14
WP_000109272.1 423158 422009 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_023258090.1 424371 423507 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)8.80E-119

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_021000121.1 back to top

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Couldn't process WP_021000121.1 Genbank filestream. May be corrupt.

Results for WP_023242434.1 [Salmonella enterica subsp. enterica serovar Albany] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023193417.1 22790 20525 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.50E-14
5.00E-07
WP_000167332.1 23304 23019 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 25133 23459 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 25930 25246 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 26864 26102 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_023242433.1 28290 27006 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.90E-149
WP_000079590.1 29449 28360 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642868.1 30327 29634 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023242434.1 30463 32224 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.20E-81
3.30E-65

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194825.1 [Salmonella enterica subsp. enterica serovar Paratyphi B] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_459942.1 116651 117516 + 288INFERRED GENE---
WP_000109264.1 117865 119014 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.10E-30
1.40E-08
3.20E-07
3.50E-04
WP_001134266.1 119231 120653 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.90E-28
7.60E-14
WP_000067973.1 121743 120945 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_010989001.1 122188 121861 - 108NO PFAM MATCH---
WP_023211033.1 122318 123278 + 319PF11047SopDSalmonella outer protein D6.60E-197
WP_001292799.1 125636 123353 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 126553 125695 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_000194825.1 128718 126957 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.80E-82
3.30E-65
WP_000642867.1 128854 129547 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023209993.1 129732 130821 + 362PF00266Aminotran_5Aminotransferase class-V1.00E-69
WP_000445191.1 130891 132175 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.40E-150
WP_000792301.1 132317 133079 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 133251 133935 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 134048 135722 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 135877 136162 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000705783.1 136391 138656 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.30E-14
5.00E-07

Results for WP_001747674.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001549599.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000705799.1 64203 61938 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.00E-53
5.90E-15
1.60E-07
WP_000167332.1 64717 64432 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 66546 64872 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 67343 66659 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 68277 67515 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_031564996.1 69704 68420 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.60E-150
WP_000079590.1 70863 69774 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642870.1 71741 71048 - 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_001549599.1 71877 73638 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-82
1.40E-64
WP_197394329.1 74042 74900 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-75
WP_265280223.1 74959 77242 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-207
4.80E-44
WP_001145566.1 78273 77313 - 319PF11047SopDSalmonella outer protein D1.10E-182
NP_459946.1 78404 78730 + 108INFERRED GENE---
WP_000067928.1 78848 79646 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 81359 79937 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109272.1 82725 81576 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534685.1 83938 83074 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_023247066.1 back to top

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Couldn't process WP_023247066.1 Genbank filestream. May be corrupt.

Results for WP_024797294.1 [Salmonella enterica subsp. enterica serovar Bovismorbificans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024797291.1 126057 123792 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.40E-53
4.30E-15
5.00E-07
WP_000167332.1 126571 126286 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 128400 126726 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 129197 128513 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 130131 129369 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_024797292.1 131558 130274 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.80E-149
WP_024797293.1 132717 131628 - 362PF00266Aminotran_5Aminotransferase class-V7.30E-70
WP_000642868.1 133595 132902 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_024797294.1 133731 135492 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.60E-82
6.10E-65
WP_000642539.1 135896 136754 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292803.1 136813 139096 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-208
4.80E-44
WP_024797295.1 140127 139167 - 319PF11047SopDSalmonella outer protein D3.30E-180
NP_459946.1 140257 140594 + 112INFERRED GENE---
WP_024797297.1 140712 141510 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134261.1 143223 141801 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.00E-28
6.80E-14
WP_000109271.1 144589 143440 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_024797298.1 145802 144938 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)8.10E-120
WP_000213046.1 145803 145893 + 30INFERRED GENE---

Results for WP_000194826.1 back to top

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Couldn't process WP_000194826.1 Genbank filestream. May be corrupt.

Results for WP_023203923.1 back to top

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Couldn't process WP_023203923.1 Genbank filestream. May be corrupt.

Results for WP_001518494.1 [Salmonella enterica subsp. enterica serovar Kentucky] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000167332.1 452 167 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 2281 607 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3078 2394 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 4012 3250 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000445195.1 5438 4154 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.40E-149
WP_000079593.1 6597 5508 - 362PF00266Aminotran_5Aminotransferase class-V5.30E-70
WP_000642868.1 7475 6782 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_001518494.1 7611 9372 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.50E-82
3.30E-65
WP_000642539.1 9776 10634 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 10693 12976 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_001145553.1 14007 13047 - 319PF11047SopDSalmonella outer protein D3.40E-178
NP_459946.1 14137 14474 + 112INFERRED GENE---
WP_000067928.1 14592 15390 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134264.1 17112 15690 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 18478 17329 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_247258792.1 19691 18827 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)5.10E-119

Results for WP_023136935.1 back to top

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Couldn't process WP_023136935.1 Genbank filestream. May be corrupt.

Results for WP_023221572.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_061380291.1 21459 22323 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.10E-119
WP_000109274.1 22672 23821 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.40E-31
6.30E-09
3.30E-07
2.00E-04
WP_001134260.1 24038 25460 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
7.50E-14
WP_267272916.1 26550 25752 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.90E-32
2.10E-18
3.00E-06
WP_077951497.1 26995 26668 - 108NO PFAM MATCH---
WP_267272917.1 27125 28079 + 317PF11047SopDSalmonella outer protein D1.30E-148
WP_001292799.1 30433 28150 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 31350 30492 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_023221572.1 33515 31754 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.20E-82
3.60E-65
WP_000642868.1 33651 34344 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000079584.1 34529 35618 + 362PF00266Aminotran_5Aminotransferase class-V1.20E-69
WP_000445191.1 35688 36972 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.40E-150
WP_000792301.1 37114 37876 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 38048 38732 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 38845 40519 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 40674 40959 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_267272918.1 41188 43453 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.00E-53
1.10E-14
1.80E-06

Results for WP_000194825.1 back to top

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Couldn't process WP_000194825.1 Genbank filestream. May be corrupt.

Results for WP_000194824.1 back to top

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Couldn't process WP_000194824.1 Genbank filestream. May be corrupt.

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023195360.1 [Salmonella sp. YP437-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000534681.1 16 880 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119
WP_000109271.1 1229 2378 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_001134264.1 2595 4017 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000067928.1 5107 4309 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
NP_459946.1 5226 5563 + 112INFERRED GENE---
WP_001647549.1 5693 6647 + 317PF11047SopDSalmonella outer protein D2.10E-148
WP_001292799.1 9001 6718 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 9918 9060 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_023195360.1 12083 10322 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.70E-82
7.40E-65
WP_000642870.1 12219 12912 + 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_000079590.1 13097 14186 + 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_023195361.1 14256 15540 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-149
WP_000792301.1 15682 16444 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 16616 17300 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 17413 19087 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 19242 19527 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_023195362.1 19756 22021 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.40E-53
1.50E-14
5.00E-07

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023240906.1 [Salmonella enterica subsp. enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000705785.1 3082400 3080135 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
8.80E-54
5.30E-15
5.00E-07
WP_000167332.1 3082914 3082629 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 3084743 3083069 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3085540 3084856 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 3086474 3085712 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000445191.1 3087900 3086616 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.40E-150
WP_000079595.1 3089059 3087970 - 362PF00266Aminotran_5Aminotransferase class-V2.60E-70
WP_000642868.1 3089937 3089244 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023240906.1 3090073 3091834 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.20E-81
3.40E-65
WP_000642539.1 3092238 3093096 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 3093155 3095438 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_023240907.1 3096473 3095513 - 319PF11047SopDSalmonella outer protein D5.00E-196
WP_010989001.1 3096603 3096930 + 108NO PFAM MATCH---
WP_000067928.1 3097048 3097846 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134268.1 3099560 3098138 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
3.40E-28
8.80E-14
WP_000109278.1 3100926 3099777 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.20E-28
4.80E-09
7.00E-07
3.80E-04
WP_023240908.1 3102139 3101275 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.50E-118

Results for WP_001764662.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001652482.1 [Salmonella enterica subsp. enterica serovar Uganda] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024152338.1 101041 98776 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.50E-14
5.00E-07
WP_000167332.1 101555 101270 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 103384 101710 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125006.1 104181 103497 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.90E-85
1.70E-07
2.60E-04
8.50E-04
9.10E-04
WP_000792301.1 105115 104353 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000445191.1 106541 105257 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.40E-150
WP_000079590.1 107695 106606 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642867.1 108573 107880 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_001652482.1 108709 110470 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.60E-82
3.40E-65
WP_000642539.1 110874 111732 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_079798560.1 111791 114074 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.70E-208
4.80E-44
WP_079798561.1 115109 114149 - 319PF11047SopDSalmonella outer protein D5.20E-188
WP_010989001.1 115239 115566 + 108NO PFAM MATCH---
WP_000067973.1 115684 116482 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134260.1 118195 116773 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
7.50E-14
WP_000109274.1 119561 118412 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.40E-31
6.30E-09
3.30E-07
2.00E-04
WP_000534681.1 120774 119910 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_023220172.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_080102595.1 2896652 2894387 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.00E-54
1.40E-14
1.60E-07
WP_000167332.1 2897166 2896881 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_023220171.1 2898995 2897321 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.20E-100
5.00E-11
4.60E-07
WP_000125007.1 2899792 2899108 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000792301.1 2900726 2899964 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_001528800.1 2902152 2900868 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-149
WP_000079585.1 2903311 2902222 - 362PF00266Aminotran_5Aminotransferase class-V1.90E-70
WP_000642868.1 2904189 2903496 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_023220172.1 2904325 2906086 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.80E-82
6.20E-65
WP_000642539.1 2906490 2907348 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292799.1 2907407 2909690 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_023220173.1 2910723 2909763 - 319PF11047SopDSalmonella outer protein D3.10E-180
WP_023220174.1 2910965 2911190 + 74NO PFAM MATCH---
WP_023785365.1 2911281 2912106 + 274PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.40E-31
2.30E-18
3.30E-06
WP_001134264.1 2913818 2912396 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.50E-28
7.00E-14
WP_000109271.1 2915184 2914035 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-31
7.00E-09
3.30E-07
1.80E-04
WP_000534681.1 2916397 2915533 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_000194822.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023356641.1 back to top

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Couldn't process WP_023356641.1 Genbank filestream. May be corrupt.

Results for WP_031627920.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_006962607.1 [Vibrio sp. THAF191c] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_152472237.1 2118809 2117072 - 578NO PFAM MATCH---
WP_152472238.1 2120770 2119168 - 533PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.10E-144
WP_045984795.1 2121874 2120884 - 329PF01244Peptidase_M19Membrane dipeptidase (Peptidase family M19)5.90E-73
WP_006962602.1 2123401 2121940 - 486PF00171AldedhAldehyde dehydrogenase family2.30E-148
WP_006962603.1 2123864 2123465 - 132PF01042Ribonuc_L-PSPEndoribonuclease L-PSP3.00E-22
WP_006962604.1 2124019 2124916 + 298PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
8.70E-38
2.30E-16
WP_006962605.1 2126183 2125088 - 364NO PFAM MATCH---
WP_006962606.1 2126854 2127676 + 273NO PFAM MATCH---
WP_006962607.1 2127681 2128872 + 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-30
WP_236612201.1 2128994 2129618 + 207PF00881NitroreductaseNitroreductase family1.10E-18
WP_006962609.1 2130473 2129750 - 240PF00561
PF12697
PF12146
PF00975
PF12695
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Thioesterase
Abhydrolase_5
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
Thioesterase domain
Alpha/beta hydrolase family
7.40E-14
1.80E-13
1.30E-12
1.80E-08
2.20E-05
WP_006962610.1 2131479 2130483 - 331PF07883
PF00190
PF11699
Cupin_2
Cupin_1
CENP-C_C
Cupin domain
Cupin
Mif2/CENP-C like
2.00E-10
2.60E-08
5.00E-05
WP_006962611.1 2132300 2131565 - 244PF13561
PF00106
PF08659
PF01370
PF16363
adh_short_C2
adh_short
KR
Epimerase
GDP_Man_Dehyd
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
5.70E-51
3.80E-46
8.90E-11
2.30E-08
2.00E-04
WP_006962612.1 2133594 2132301 - 430PF00815Histidinol_dhHistidinol dehydrogenase3.10E-143
WP_006962613.1 2133883 2134633 + 249PF03328HpcH_HpaIHpcH/HpaI aldolase/citrate lyase family2.10E-31
WP_019277689.1 2134782 2135745 + 320PF13377
PF00532
PF13407
PF00356
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
1.00E-29
3.30E-20
1.30E-12
2.80E-09
WP_152472239.1 2136213 2137188 + 324PF07366
PF12680
SnoaL
SnoaL_2
SnoaL-like polyketide cyclase
SnoaL-like domain
1.10E-15
6.00E-09

Results for WP_023371274.1 back to top

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Couldn't process WP_023371274.1 Genbank filestream. May be corrupt.

Results for WP_022522318.1 [Halomonas sp. KRD171] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_022522311.1 230376 229161 - 404PF13437
PF16576
HlyD_3
HlyD_D23
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
2.40E-13
3.20E-11
WP_022522312.1 230785 231376 + 196PF16925
PF00440
TetR_C_13
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
8.20E-37
8.50E-15
WP_022522313.1 232206 231402 - 267PF13443
PF13560
HTH_26
HTH_31
Cro/C1-type HTH DNA-binding domain
Helix-turn-helix domain
1.20E-05
1.70E-05
WP_022522314.1 233325 232314 - 336PF13602
PF00107
PF08240
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
3.20E-22
4.30E-13
1.90E-08
WP_009287358.1 233447 234332 + 294PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.20E-39
5.40E-17
WP_022522315.1 234449 235337 + 295PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
8.80E-21
1.20E-11
1.30E-05
WP_022522316.1 236831 235559 - 423PF00109
PF02801
PF00108
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
Thiolase, N-terminal domain
1.50E-58
3.40E-31
1.70E-04
WP_022522317.1 236912 237554 + 213PF00440TetR_NBacterial regulatory proteins, tetR family2.00E-13
WP_022522318.1 237726 239910 + 727PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.10E-75
1.10E-74
6.30E-09
WP_022522319.1 240892 239989 - 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.60E-28
1.70E-16
WP_022522320.1 240992 241208 + 71PF11391DUF2798Protein of unknown function (DUF2798)2.80E-20
WP_022522321.1 241393 242857 + 487PF01235Na_Ala_sympSodium:alanine symporter family1.30E-150
WP_022522322.1 242899 243913 + 337PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.40E-57
1.40E-21
WP_022522323.1 244785 243918 - 288PF00892EamAEamA-like transporter family8.60E-32
WP_022522324.1 246178 244948 - 409PF07670GateNucleoside recognition6.70E-11
WP_009287351.1 247192 246259 - 310PF03956Lys_exportLysine exporter LysO3.30E-51
WP_082116920.1 247834 247192 - 213NO PFAM MATCH---

Results for WP_012260565.1 [Bacillus mycoides] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002168863.1 71964 72342 + 126INFERRED GENE---
WP_001036563.1 72405 72721 + 105INFERRED GENE---
WP_002011459.1 73038 72855 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_016119838.1 73444 73066 - 125NO PFAM MATCH---
WP_002140896.1 73656 73440 - 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
6.20E-18
3.80E-10
2.80E-07
5.50E-05
7.20E-05
WP_002140892.1 74482 77350 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.30E-63
4.60E-55
2.30E-36
WP_215588838.1 77479 78736 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
8.00E-81
6.30E-20
9.50E-13
1.10E-04
WP_016101526.1 78861 80781 + 639NO PFAM MATCH---
WP_012260565.1 80777 82727 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.70E-85
WP_256484823.1 82749 84312 + 520PF00881NitroreductaseNitroreductase family9.70E-14
WP_137076167.1 84404 84980 + 191PF13649
PF08241
PF13847
PF13489
PF01209
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
5.50E-19
6.10E-18
5.40E-17
1.70E-13
5.80E-12
WP_002030461.1 85437 85026 - 136PF13048DUF3908Protein of unknown function (DUF3908)1.10E-48
WP_002126016.1 86930 85595 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.80E-61
6.50E-20
2.50E-16
5.60E-15
9.30E-10
WP_061689062.1 87129 87552 + 140NO PFAM MATCH---
WP_256484824.1 88828 87595 - 410PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
1.50E-22
9.00E-08
6.20E-04
WP_256484825.1 89630 88847 - 260PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
5.20E-06
1.50E-05
5.10E-05
WP_256484826.1 89830 90664 + 277PF11667DUF3267Putative zincin peptidase3.50E-04

Results for WP_002709535.1 [Thiothrix nivea DSM 5205] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002709527.1 3129893 3130802 + 302PF00480
PF02685
ROK
Glucokinase
ROK family
Glucokinase
5.20E-78
1.30E-06
WP_002709528.1 3131321 3130808 - 170NO PFAM MATCH---
WP_002709529.1 3133422 3131451 - 656PF03600
PF02080
PF00939
CitMHS
TrkA_C
Na_sulph_symp
Citrate transporter
TrkA-C domain
Sodium:sulfate symporter transmembrane region
4.00E-54
4.20E-15
7.20E-15
WP_002709530.1 3134193 3133464 - 242PF00849PseudoU_synth_2RNA pseudouridylate synthase2.70E-34
WP_002709531.1 3136126 3134254 - 623PF13361
PF08378
PF13538
PF13245
PF00580
UvrD_C
NERD
UvrD_C_2
AAA_19
UvrD-helicase
UvrD-like helicase C-terminal domain
Nuclease-related domain
UvrD-like helicase C-terminal domain
AAA domain
UvrD/REP helicase N-terminal domain
1.30E-23
2.40E-12
2.30E-11
1.30E-07
1.30E-06
WP_002709532.1 3136342 3136156 - 61NO PFAM MATCH---
WP_002709533.1 3136469 3136898 + 142PF00571CBSCBS domain6.90E-21
WP_002709534.1 3137639 3136907 - 243PF00194Carb_anhydraseEukaryotic-type carbonic anhydrase6.60E-48
WP_002709535.1 3139414 3137677 - 578PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.30E-83
1.40E-38
WP_002709536.1 3139570 3140071 + 166PF10099RskAAnti-sigma-K factor rskA2.70E-10
WP_002709537.1 3140364 3140124 - 79NO PFAM MATCH---
WP_002709538.1 3140616 3141312 + 231NO PFAM MATCH---
WP_040839490.1 3142145 3141332 - 270NO PFAM MATCH---
WP_002709540.1 3142932 3142245 - 228PF06940DUF1287Domain of unknown function (DUF1287)3.00E-65
WP_002709541.1 3143251 3142936 - 104PF00355
PF13806
Rieske
Rieske_2
Rieske [2Fe-2S] domain
Rieske-like [2Fe-2S] domain
2.80E-13
8.50E-10
WP_040839491.1 3143249 3144137 + 295PF01370EpimeraseNAD dependent epimerase/dehydratase family1.30E-06
WP_002709543.1 3144129 3144633 + 167PF04751DUF615Protein of unknown function (DUF615)5.60E-55

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_025302273.1 back to top

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Couldn't process WP_025302273.1 Genbank filestream. May be corrupt.

Results for WP_065561150.1 [Gilliamella apicola] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_065561143.1 35984 36704 + 239PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component5.70E-14
WP_141671413.1 37216 36823 - 130NO PFAM MATCH---
WP_065561145.1 37918 37291 - 208PF00717
PF01726
Peptidase_S24
LexA_DNA_bind
Peptidase S24-like
LexA DNA binding domain
1.30E-31
4.30E-29
WP_065561146.1 38174 38777 + 200PF01121CoaEDephospho-CoA kinase1.50E-64
WP_065561147.1 38789 39527 + 245PF07072ZapDCell division protein2.70E-64
WP_065561148.1 39556 39772 + 71PF03884YacGDNA gyrase inhibitor YacG2.80E-25
WP_065561149.1 39771 40797 + 341PF00814TsaDtRNA N6-adenosine threonylcarbamoyltransferase7.30E-102
WP_081299382.1 41241 40911 - 109PF14110DUF4282Domain of unknown function (DUF4282)3.60E-15
WP_065561150.1 41366 43133 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-76
2.70E-49
WP_065561151.1 44040 43209 - 276PF08501
PF03807
PF01488
PF18317
Shikimate_dh_N
F420_oxidored
Shikimate_DH
SDH_C
Shikimate dehydrogenase substrate binding domain
NADP oxidoreductase coenzyme F420-dependent
Shikimate / quinate 5-dehydrogenase
Shikimate 5'-dehydrogenase C-terminal domain
1.00E-15
2.10E-04
2.20E-04
5.00E-04
WP_065561152.1 44110 44440 + 109PF11756YgbA_NONitrous oxide-stimulated promoter1.10E-38
WP_065561153.1 44646 45732 + 361PF01168
PF00842
Ala_racemase_N
Ala_racemase_C
Alanine racemase, N-terminal domain
Alanine racemase, C-terminal domain
1.20E-57
3.30E-39
WP_065561154.1 45748 46771 + 340PF02618YceGYceG-like family2.00E-81
WP_065561155.1 47724 46845 - 292PF04287
PF01510
DUF446
Amidase_2
tRNA pseudouridine synthase C
N-acetylmuramoyl-L-alanine amidase
1.30E-30
2.70E-27
WP_065561156.1 47924 48356 + 143PF07963
PF00114
N_methyl
Pilin
Prokaryotic N-terminal methylation motif
Pilin (bacterial filament)
1.00E-08
2.50E-05
WP_065561157.1 48395 49505 + 369PF00437T2SSEType II/IV secretion system protein7.80E-96
WP_065561158.1 49501 50677 + 391PF00482T2SSFType II secretion system (T2SS), protein F3.40E-51

Results for WP_023247066.1 back to top

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Couldn't process WP_023247066.1 Genbank filestream. May be corrupt.

Results for WP_001667762.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_005051051.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_024082579.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_054298364.1 [Methanosarcina flavescens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_054297573.1 2013173 2012777 - 131PF01797Y1_TnpTransposase IS200 like1.10E-35
WP_054297574.1 2013218 2014331 + 370PF01385
PF07282
PF12323
OrfB_IS605
OrfB_Zn_ribbon
HTH_OrfB_IS605
Probable transposase
Putative transposase DNA-binding domain
Helix-turn-helix domain
2.20E-28
3.10E-24
1.20E-20
WP_054298369.1 2014507 2015323 + 271PF07796DUF1638Protein of unknown function (DUF1638)9.20E-36
WP_054298368.1 2016191 2015471 - 239PF13243SQHop_cyclase_CSqualene-hopene cyclase C-terminal domain8.20E-07
AOB57_RS08930 2016356 2016914 + 186INFERRED GENE---
WP_054298367.1 2017565 2017067 - 165PF00582UspUniversal stress protein family5.60E-36
WP_054298366.1 2017853 2018078 + 74NO PFAM MATCH---
WP_226999456.1 2018826 2018166 - 219PF07812TfuATfuA-like protein7.00E-47
WP_054298364.1 2020097 2018822 - 424PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-85
WP_226999457.1 2020399 2020645 + 81PF11127DUF2892Protein of unknown function (DUF2892)2.50E-07
WP_082384156.1 2021173 2023978 + 934PF00689
PF00122
PF00702
PF00690
PF13246
Cation_ATPase_C
E1-E2_ATPase
Hydrolase
Cation_ATPase_N
Cation_ATPase
Cation transporting ATPase, C-terminus
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Cation transporter/ATPase, N-terminus
Cation transport ATPase (P-type)
3.50E-53
1.40E-51
1.60E-22
1.30E-21
2.30E-20
WP_167829583.1 2024528 2024684 + 51NO PFAM MATCH---
WP_226999458.1 2024952 2027307 + 784PF00122
PF00702
PF08282
PF12710
E1-E2_ATPase
Hydrolase
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.90E-52
1.60E-40
4.90E-06
3.60E-04
WP_167829584.1 2028061 2027611 - 149NO PFAM MATCH---
WP_226999459.1 2028713 2028446 - 88PF05207
PF18439
PF09723
PF07754
zf-CSL
zf_UBZ
Zn-ribbon_8
HVO_2753_ZBP
CSL zinc finger
Ubiquitin-Binding Zinc Finger
Zinc ribbon domain
Small zinc finger protein HVO_2753-like, Zn-binding pocket
6.40E-05
1.60E-04
2.30E-04
2.50E-04
WP_054298359.1 2029299 2028981 - 105NO PFAM MATCH---
WP_054298358.1 2031016 2029537 - 492PF01409
PF17759
PF00152
tRNA-synt_2d
tRNA_synthFbeta
tRNA-synt_2
tRNA synthetases class II core domain (F)
Phenylalanyl tRNA synthetase beta chain CLM domain
tRNA synthetases class II (D, K and N)
1.20E-90
2.60E-08
7.50E-04

Results for WP_074840107.1 [Succinivibrio dextrinosolvens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_164954296.1 1539471 1537224 - 748PF20157
PF01973
Maf_flag10_N
MptE-like
Glycosyltransferase Maf N-terminal domain
6-hydroxymethylpterin diphosphokinase MptE-like
4.00E-39
2.00E-28
WP_074841894.1 1541884 1539727 - 718PF20157
PF01973
Maf_flag10_N
MptE-like
Glycosyltransferase Maf N-terminal domain
6-hydroxymethylpterin diphosphokinase MptE-like
9.70E-44
4.90E-29
WP_074841893.1 1542987 1542126 - 286PF00669
PF00700
Flagellin_N
Flagellin_C
Bacterial flagellin N-terminal helical region
Bacterial flagellin C-terminal helical region
3.00E-39
1.50E-21
WP_164954297.1 1543653 1545429 + 591PF09820
PF08011
AAA-ATPase_like
PDDEXK_9
Predicted AAA-ATPase
PD-(D/E)XK nuclease superfamily
2.10E-47
2.80E-18
WP_164954298.1 1545521 1547303 + 593PF09820
PF08011
AAA-ATPase_like
PDDEXK_9
Predicted AAA-ATPase
PD-(D/E)XK nuclease superfamily
3.90E-51
1.90E-17
WP_164954299.1 1547395 1549171 + 591PF09820
PF08011
AAA-ATPase_like
PDDEXK_9
Predicted AAA-ATPase
PD-(D/E)XK nuclease superfamily
2.30E-47
2.30E-18
WP_074840111.1 1550614 1549501 - 370PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
4.90E-53
2.10E-23
WP_074840109.1 1551503 1550648 - 284NO PFAM MATCH---
WP_074840107.1 1551878 1553639 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.60E-67
6.60E-46
WP_074840105.1 1553625 1554231 + 201PF03550LolBOuter membrane lipoprotein LolB6.00E-15
WP_074840103.1 1554239 1555082 + 280PF00288
PF08544
GHMP_kinases_N
GHMP_kinases_C
GHMP kinases N terminal domain
GHMP kinases C terminal
1.90E-09
2.10E-07
WP_074840101.1 1555101 1556733 + 543PF09820
PF08011
PF14516
AAA-ATPase_like
PDDEXK_9
AAA_35
Predicted AAA-ATPase
PD-(D/E)XK nuclease superfamily
AAA-like domain
4.30E-36
2.80E-08
1.40E-05
WP_074840099.1 1557019 1557970 + 316PF13793
PF14572
PF00156
PF14681
Pribosyltran_N
Pribosyl_synth
Pribosyltran
UPRTase
N-terminal domain of ribose phosphate pyrophosphokinase
Phosphoribosyl synthetase-associated domain
Phosphoribosyl transferase domain
Uracil phosphoribosyltransferase
7.80E-50
5.90E-26
1.10E-20
9.40E-06
WP_074840097.1 1559409 1558032 - 458NO PFAM MATCH---
WP_074840095.1 1560776 1559417 - 452PF08245
PF01225
PF02875
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Mur ligase middle domain
Mur ligase family, catalytic domain
Mur ligase family, glutamate ligase domain
9.90E-21
1.60E-20
1.10E-11
WP_074840093.1 1562124 1561035 - 362PF02424ApbEApbE family7.00E-64
WP_074840091.1 1562477 1562222 - 84NO PFAM MATCH---

Results for WP_049892506.1 [Halobacterium sp. NRC-34001] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010903018.1 1047373 1046926 - 148PF03684UPF0179Uncharacterised protein family (UPF0179)3.20E-44
WP_010903019.1 1047794 1047398 - 131PF19137DUF5820Family of unknown function (DUF5820)3.90E-43
WP_010903020.1 1048332 1047957 - 124PF01638
PF13463
PF13601
PF01022
HxlR
HTH_27
HTH_34
HTH_5
HxlR-like helix-turn-helix
Winged helix DNA-binding domain
Winged helix DNA-binding domain
Bacterial regulatory protein, arsR family
2.30E-21
2.50E-06
2.30E-05
9.40E-04
WP_010903021.1 1048491 1048893 + 133PF01641SelRSelR domain1.40E-53
WP_012289321.1 1049176 1050979 + 600PF16203
PF04851
PF00271
PF00176
PF00270
ERCC3_RAD25_C
ResIII
Helicase_C
SNF2-rel_dom
DEAD
ERCC3/RAD25/XPB C-terminal helicase
Type III restriction enzyme, res subunit
Helicase conserved C-terminal domain
SNF2-related domain
DEAD/DEAH box helicase
2.60E-22
2.00E-16
6.80E-12
3.10E-10
2.20E-04
WP_010903023.1 1051051 1051450 + 132PF03061
PF13279
PF01643
4HBT
4HBT_2
Acyl-ACP_TE
Thioesterase superfamily
Thioesterase-like superfamily
Acyl-ACP thioesterase
5.50E-23
1.60E-16
1.20E-13
WP_010903024.1 1053546 1051497 - 682PF02872
PF00149
5_nucleotid_C
Metallophos
5'-nucleotidase, C-terminal domain
Calcineurin-like phosphoesterase
7.50E-40
6.30E-04
WP_010903025.1 1053695 1054838 + 380PF01889DUF63Membrane protein of unknown function DUF631.30E-34
WP_049892506.1 1056603 1054848 - 584PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-42
WP_012289323.1 1057495 1056676 - 272PF19138DUF5821Family of unknown function (DUF5821)4.80E-93
WP_012289324.1 1059288 1057572 - 571PF12770CHATCHAT domain2.20E-05
WP_012289325.1 1059401 1060649 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
2.00E-147
2.10E-07
8.40E-06
WP_010903030.1 1060821 1061715 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.10E-66
7.60E-33
WP_012289326.1 1062454 1061749 - 234NO PFAM MATCH---
WP_010903032.1 1062547 1063846 + 432PF12697
PF12146
PF20408
PF00326
Abhydrolase_6
Hydrolase_4
Abhydrolase_11
Peptidase_S9
Alpha/beta hydrolase family
Serine aminopeptidase, S33
Alpha/beta hydrolase domain
Prolyl oligopeptidase family
1.00E-07
5.00E-06
4.80E-05
4.90E-05
WP_010903033.1 1064013 1064469 + 151NO PFAM MATCH---
WP_010903034.1 1064499 1065411 + 303PF06267
PF08823
DUF1028
PG_binding_2
Family of unknown function (DUF1028)
Putative peptidoglycan binding domain
3.20E-73
1.80E-28

Results for WP_061912365.1 [Geobacillus subterraneus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012749253.1 3407827 3408227 + 133INFERRED GENE---
WP_061912372.1 3409088 3408365 - 240PF02589LUD_domLUD domain2.00E-33
WP_172418756.1 3410515 3409084 - 476PF02589
PF11870
PF13183
PF13237
PF13187
LUD_dom
LutB_C
Fer4_8
Fer4_10
Fer4_9
LUD domain
Lactate utilisation protein B, C-terminal
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
1.20E-56
3.20E-24
1.00E-09
2.10E-07
1.60E-06
WP_082799321.1 3411251 3410453 - 265PF02754CCGCysteine-rich domain7.00E-36
WP_082799322.1 3412738 3412138 - 199PF00072
PF00196
PF08281
PF13384
PF13412
Response_reg
GerE
Sigma70_r4_2
HTH_23
HTH_24
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
Winged helix-turn-helix DNA-binding
8.90E-25
1.80E-17
3.60E-05
1.10E-04
5.20E-04
WP_235598021.1 3414662 3412709 - 650PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase1.30E-09
WP_172418757.1 3415161 3414804 - 118NO PFAM MATCH---
WP_172418758.1 3415332 3415167 - 54NO PFAM MATCH---
WP_061912365.1 3415536 3416838 + 433PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-59
WP_172418759.1 3416859 3417597 + 245NO PFAM MATCH---
WP_033842531.1 3417676 3418813 + 378PF01548
PF02371
DEDD_Tnp_IS110
Transposase_20
Transposase
Transposase IS116/IS110/IS902 family
4.00E-28
5.00E-27
WP_033842531.1 3420038 3421175 + 378PF01548
PF02371
DEDD_Tnp_IS110
Transposase_20
Transposase
Transposase IS116/IS110/IS902 family
4.00E-28
5.00E-27
WP_061912237.1 3421629 3423333 + 567PF00881NitroreductaseNitroreductase family2.70E-06
WP_061912238.1 3423325 3423997 + 223PF00881NitroreductaseNitroreductase family2.30E-09
WP_235597947.1 3424099 3424264 + 54NO PFAM MATCH---
WP_153017122.1 3424291 3424477 + 61NO PFAM MATCH---
WP_172418760.1 3424493 3424820 + 108NO PFAM MATCH---

Results for WP_004720372.1 [Acinetobacter sp. NyZ410] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_244012562.1 2512756 2513668 + 303PF07859
PF20434
PF00135
Abhydrolase_3
BD-FAE
COesterase
alpha/beta hydrolase fold
BD-FAE
Carboxylesterase family
5.70E-69
9.30E-20
2.80E-10
WP_244012564.1 2514801 2513775 - 341PF16113
PF00378
ECH_2
ECH_1
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
7.00E-96
3.00E-31
WP_244012566.1 2515590 2514816 - 257PF00378
PF16113
ECH_1
ECH_2
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase
3.10E-81
4.80E-38
WP_244012567.1 2516773 2515645 - 375PF00441
PF02771
PF08028
PF02770
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA_dh_M
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
9.70E-53
6.50E-37
1.10E-31
4.00E-26
WP_244012568.1 2518499 2516846 - 550PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
3.30E-76
8.50E-24
WP_004720378.1 2519493 2518602 - 296PF03446
PF14833
PF03807
PF07991
PF02826
NAD_binding_2
NAD_binding_11
F420_oxidored
IlvN
2-Hacid_dh_C
NAD binding domain of 6-phosphogluconate dehydrogenase
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NADP oxidoreductase coenzyme F420-dependent
Acetohydroxy acid isomeroreductase, NADPH-binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2.70E-50
4.80E-36
2.80E-07
1.80E-05
3.60E-05
WP_244012570.1 2521026 2519508 - 505PF00171AldedhAldehyde dehydrogenase family5.90E-143
WP_004720374.1 2521191 2522073 + 293PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.40E-27
2.20E-15
WP_004720372.1 2524440 2522235 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.60E-74
5.10E-74
2.50E-08
WP_004720371.1 2525277 2524686 - 196PF02342TerDTerD domain3.80E-55
WP_004720370.1 2526011 2525294 - 238PF01987AIM24Mitochondrial biogenesis AIM242.30E-48
WP_244012572.1 2527333 2526025 - 435PF10138
PF02342
PF07002
PF00092
vWA-TerF-like
TerD
Copine
VWA
vWA found in TerF C terminus
TerD domain
Copine
von Willebrand factor type A domain
1.10E-75
2.20E-26
2.60E-10
1.30E-04
WP_244012574.1 2528028 2527449 - 192PF02342TerDTerD domain3.00E-80
WP_244012576.1 2529144 2528031 - 370PF04332
PF03741
DUF475
TerC
Protein of unknown function (DUF475)
Integral membrane protein TerC family
1.20E-116
5.70E-16
WP_004821599.1 2529736 2529160 - 191PF02342TerDTerD domain1.80E-87
WP_244012578.1 2531032 2529793 - 412PF02342TerDTerD domain1.10E-34
WP_228128950.1 2531397 2532354 + 318PF15632
PF13535
PF02655
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp in the biosynthetic pathway with Ter operon
ATP-grasp domain
ATP-grasp domain
7.30E-28
1.20E-05
9.50E-04

Results for WP_003621370.1 [Lactobacillus delbrueckii subsp. bulgaricus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076611241.1 73891 74430 + 179INFERRED GENE---
WP_003624098.1 75185 74516 - 222PF02361CbiQCobalt transport protein2.60E-14
WP_003624100.1 76550 75194 - 451PF00005
PF13304
PF02463
PF13555
PF13476
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
1.90E-48
4.30E-24
2.90E-19
6.60E-12
2.50E-10
WP_035175998.1 76852 78328 + 491PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
8.50E-40
9.40E-13
7.00E-11
WP_003624103.1 78391 79240 + 282PF12833
PF00165
PF14525
PF02311
HTH_18
HTH_AraC
AraC_binding_2
AraC_binding
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-binding-like domain
AraC-like ligand binding domain
9.80E-15
8.40E-11
8.80E-05
1.70E-04
WP_003624105.1 79381 80314 + 310PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
3.80E-25
1.30E-10
WP_003621375.1 80310 81057 + 248PF06182ABC2_membrane_6ABC-2 family transporter protein3.30E-14
WP_003624108.1 81053 81818 + 254PF06182ABC2_membrane_6ABC-2 family transporter protein1.30E-33
WP_003621370.1 82098 83271 + 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-24
WP_003624110.1 84104 83264 - 279PF01381HTH_3Helix-turn-helix2.20E-04
WP_003624112.1 85147 84247 - 299PF01435Peptidase_M48Peptidase family M483.60E-36
WP_003621365.1 85718 85163 - 184PF04011LemALemA family3.10E-56
WP_003624114.1 87021 85875 - 381PF03600CitMHSCitrate transporter4.50E-18
WP_003624116.1 87870 88782 + 303PF01844
PF13395
HNH
HNH_4
HNH endonuclease
HNH endonuclease
6.30E-10
1.30E-07
WP_011543537.1 89011 90151 + 379PF01476
PF00877
PF01080
LysM
NLPC_P60
Presenilin
LysM domain
NlpC/P60 family
Presenilin
4.20E-34
1.40E-24
5.20E-04
WP_035176000.1 90338 90542 + 67NO PFAM MATCH---
WP_003621351.1 91540 90778 - 253PF00005
PF13304
PF02463
PF09818
PF13175
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA ATPase domain
1.70E-34
4.00E-11
3.50E-08
9.70E-05
5.80E-04

Results for WP_048387803.1 [Pseudomonas helleri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_153350745.1 50859 50661 - 65NO PFAM MATCH---
WP_048387844.1 51213 51669 + 151PF13673
PF13508
PF00583
PF08445
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
FR47-like protein
9.80E-16
1.30E-12
7.50E-09
2.70E-04
WP_048387812.1 52403 51713 - 229PF01936NYNNYN domain5.70E-08
WP_153335588.1 53128 52852 - 91PF05016ParE_toxinParE toxin of type II toxin-antitoxin system, parDE6.10E-13
WP_048368765.1 53369 53105 - 87PF01402RHH_1Ribbon-helix-helix protein, copG family5.80E-06
WP_048387809.1 53832 54183 + 116PF11275DUF3077Protein of unknown function (DUF3077)1.70E-04
WP_048387807.1 54413 54641 + 75PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system7.60E-13
WP_048387805.1 54637 55012 + 124PF01850PINPIN domain7.10E-12
WP_048387803.1 55203 57414 + 736PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.60E-73
4.30E-72
4.40E-09
WP_048368755.1 57645 58185 + 179PF13628
PF03713
DUF4142
DUF305
Domain of unknown function (DUF4142)
Domain of unknown function (DUF305)
5.80E-31
8.40E-04
WP_048368754.1 58531 58234 - 98PF19925DUF6388Family of unknown function (DUF6388)3.90E-33
WP_153367582.1 59029 58626 - 133PF07690MFS_1Major Facilitator Superfamily3.30E-10

Results for WP_025368300.1 back to top

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Couldn't process WP_025368300.1 Genbank filestream. May be corrupt.

Results for WP_014304579.1 back to top

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Couldn't process WP_014304579.1 Genbank filestream. May be corrupt.

Results for WP_050038117.1 [Haloarcula sp. CBA1122] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004961170.1 21252 21105 - 48NO PFAM MATCH---
WP_050007612.1 21311 22031 + 239NO PFAM MATCH---
WP_191449334.1 22518 22035 - 160PF00293NUDIXNUDIX domain3.70E-13
WP_014040444.1 23412 22518 - 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
4.50E-67
2.10E-35
WP_058990820.1 24075 23487 - 195NO PFAM MATCH---
WP_050038115.1 25406 24158 - 415PF00464
PF00155
SHMT
Aminotran_1_2
Serine hydroxymethyltransferase
Aminotransferase class I and II
2.20E-151
7.30E-08
WP_014040447.1 25559 27647 + 695NO PFAM MATCH---
WP_008309020.1 28018 28836 + 272INFERRED GENE---
WP_050038117.1 28867 30577 + 569PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-48
WP_014040450.1 31768 30619 - 382PF01889DUF63Membrane protein of unknown function DUF634.50E-35
WP_064288120.1 32710 31870 - 279PF00459Inositol_PInositol monophosphatase family2.70E-46
WP_004518094.1 32983 32782 - 66NO PFAM MATCH---
WP_191449335.1 33102 33282 + 59NO PFAM MATCH---
WP_252718702.1 33877 34381 + 167PF00535
PF13641
Glycos_transf_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
1.90E-21
2.90E-05
WP_252718703.1 34341 35091 + 249NO PFAM MATCH---
WP_050007609.1 36106 35119 - 328PF18884TSP3_bacBacterial TSP3 repeat1.40E-11
WP_252718704.1 36457 37777 + 439PF01882DUF58Protein of unknown function DUF581.30E-20

Results for WP_058669164.1 back to top

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Couldn't process WP_058669164.1 Genbank filestream. May be corrupt.

Results for WP_010035543.1 [Streptomyces sp. SID5464] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_237556469.1 170034 168720 - 437PF07732
PF07731
PF00394
PF00127
Cu-oxidase_3
Cu-oxidase_2
Cu-oxidase
Copper-bind
Multicopper oxidase
Multicopper oxidase
Multicopper oxidase
Copper binding proteins, plastocyanin/azurin family
2.20E-25
2.60E-22
4.40E-07
4.10E-05
WP_010035536.1 170450 172016 + 521PF00881NitroreductaseNitroreductase family1.50E-12
WP_078602758.1 172179 172353 + 57PF19409Thiopep_preThiopeptide-type bacteriocin precursor6.30E-12
WP_078602759.1 172388 172562 + 57PF19409Thiopep_preThiopeptide-type bacteriocin precursor6.20E-12
WP_237556459.1 173484 172806 - 225NO PFAM MATCH---
WP_010035539.1 173710 174784 + 357NO PFAM MATCH---
WP_010035540.1 174780 177393 + 870PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.00E-14
WP_010035541.1 177389 179354 + 654NO PFAM MATCH---
WP_010035543.1 179340 181254 + 637PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.00E-71
WP_102515024.1 181496 182810 + 437PF00881NitroreductaseNitroreductase family1.60E-06
WP_010035547.1 182848 183784 + 311PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.20E-37
WP_010035549.1 184396 183871 - 174PF04264YceIYceI-like domain5.20E-22
WP_010035551.1 185330 184496 - 277PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
3.30E-20
2.80E-10
1.00E-04
WP_237556470.1 186301 185326 - 324PF00005
PF13304
PF13604
ABC_tran
AAA_21
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
3.50E-28
1.90E-12
6.70E-04
WP_231911162.1 186628 187876 + 415PF01494FAD_binding_3FAD binding domain2.90E-26
WP_010035556.1 188137 188812 + 224PF00457Glyco_hydro_11Glycosyl hydrolases family 111.40E-77
WP_010035557.1 188814 189522 + 235PF01522Polysacc_deac_1Polysaccharide deacetylase3.60E-36

Results for WP_010048307.1 [Streptomyces sp. SID5464] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010048289.1 34075 34519 + 147PF12802
PF01047
PF13463
PF01978
PF12840
MarR_2
MarR
HTH_27
TrmB
HTH_20
MarR family
MarR family
Winged helix DNA-binding domain
Sugar-specific transcriptional regulator TrmB
Helix-turn-helix domain
5.20E-13
1.20E-10
4.90E-10
7.80E-05
6.70E-04
WP_010048291.1 35981 34778 - 400NO PFAM MATCH---
WP_010048293.1 36070 37045 + 324PF01497Peripla_BP_2Periplasmic binding protein2.30E-19
WP_040904381.1 37128 38187 + 352PF01032FecCDFecCD transport family7.10E-67
WP_237556603.1 38258 39191 + 310PF01032FecCDFecCD transport family3.10E-67
WP_010048299.1 39211 40033 + 273PF00005
PF13304
PF02463
PF13191
ABC_tran
AAA_21
SMC_N
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.50E-31
7.30E-08
4.20E-05
1.50E-04
WP_010048303.1 40292 41147 + 285INFERRED GENE---
WP_010048304.1 41143 42625 + 493PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
4.80E-34
5.00E-18
WP_010048307.1 42621 44001 + 459PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-40
WP_010048308.1 44012 45185 + 390PF00881NitroreductaseNitroreductase family1.30E-07
WP_202458672.1 45124 46921 + 598PF00005
PF00664
PF02463
PF13191
PF09818
ABC_tran
ABC_membrane
SMC_N
AAA_16
ABC_ATPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
ATPase of the ABC class
2.30E-33
7.20E-16
9.20E-07
4.70E-06
1.50E-04
WP_010048312.1 46917 48657 + 579PF00005
PF00664
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
9.50E-26
9.20E-14
2.60E-05
5.40E-05
WP_010048314.1 49915 50159 + 81NO PFAM MATCH---
WP_005483758.1 50259 50540 + 93INFERRED GENE---
WP_040904384.1 50780 51305 + 174NO PFAM MATCH---
WP_016828477.1 51330 51563 + 77INFERRED GENE---
WP_010048323.1 52891 51886 - 334PF13354Beta-lactamase2Beta-lactamase enzyme family2.30E-17

Results for WP_018073817.1 back to top

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Couldn't process WP_018073817.1 Genbank filestream. May be corrupt.

Results for WP_021107348.1 [Clostridium botulinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003356906.1 605238 605586 + 115NO PFAM MATCH---
WP_021107345.1 606264 607074 + 269PF11155DUF2935Domain of unknown function (DUF2935)4.40E-61
WP_003356252.1 607860 609237 + 458PF02562
PF13638
PF13604
PF13245
PF13086
PhoH
PIN_4
AAA_30
AAA_19
AAA_11
PhoH-like protein
PIN domain
AAA domain
AAA domain
AAA domain
1.40E-48
4.00E-34
9.00E-09
5.20E-08
2.30E-06
WP_003356957.1 609504 610509 + 334PF09992NAGPAPhosphodiester glycosidase7.20E-48
WP_003356452.1 610518 611535 + 338NO PFAM MATCH---
WP_003357148.1 611854 612028 + 57NO PFAM MATCH---
WP_021107346.1 612192 613149 + 318PF00881NitroreductaseNitroreductase family1.20E-20
WP_021107347.1 613152 614235 + 360NO PFAM MATCH---
WP_021107348.1 614250 615609 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-47
WP_021107349.1 615583 616222 + 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.40E-11
WP_003357056.1 616229 616958 + 242PF19393DUF5968Family of unknown function (DUF5968)1.80E-69
WP_003356748.1 617216 618149 + 310PF00005
PF13304
PF13732
PF13555
ABC_tran
AAA_21
DUF4162
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
P-loop containing region of AAA domain
3.20E-35
1.80E-10
8.10E-05
6.80E-04
WP_003356081.1 618160 619285 + 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
1.30E-34
1.30E-24
8.70E-15
6.30E-05
WP_021107350.1 619286 620429 + 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
4.70E-38
1.20E-24
3.80E-13
WP_003355862.1 620672 621323 + 216PF02163Peptidase_M50Peptidase family M501.40E-11
WP_003357215.1 621886 621400 - 161NO PFAM MATCH---
WP_003355784.1 623266 622003 - 420PF03600
PF00939
PF02040
PF06450
CitMHS
Na_sulph_symp
ArsB
NhaB
Citrate transporter
Sodium:sulfate symporter transmembrane region
Arsenical pump membrane protein
Bacterial Na+/H+ antiporter B (NhaB)
1.90E-57
1.30E-24
4.40E-23
3.10E-06

Results for WP_012704033.1 [Clostridium botulinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012704878.1 79590 79440 - 49NO PFAM MATCH---
WP_012704125.1 80100 80910 + 269PF11155DUF2935Domain of unknown function (DUF2935)1.90E-60
WP_012705582.1 81548 82925 + 458PF02562
PF13638
PF13604
PF13245
PF13086
PhoH
PIN_4
AAA_30
AAA_19
AAA_11
PhoH-like protein
PIN domain
AAA domain
AAA domain
AAA domain
5.20E-49
3.90E-34
1.20E-08
5.70E-08
2.50E-06
WP_012705063.1 83192 84197 + 334PF09992NAGPAPhosphodiester glycosidase7.20E-48
WP_012704271.1 84206 85223 + 338NO PFAM MATCH---
WP_003357148.1 85542 85716 + 57NO PFAM MATCH---
WP_012705242.1 85880 86837 + 318PF00881NitroreductaseNitroreductase family1.30E-21
WP_012704763.1 86840 87923 + 360NO PFAM MATCH---
WP_012704033.1 87938 89297 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-48
WP_011987483.1 89271 89910 + 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.20E-11
WP_012705058.1 89917 90646 + 242PF19393DUF5968Family of unknown function (DUF5968)8.30E-69
WP_012705529.1 90954 91887 + 310PF00005
PF13304
PF13555
PF13732
ABC_tran
AAA_21
AAA_29
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
Domain of unknown function (DUF4162)
5.40E-35
1.80E-10
7.10E-04
8.80E-04
WP_012704088.1 91898 93023 + 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
9.90E-33
2.10E-23
6.90E-14
5.10E-05
WP_012704563.1 93024 94167 + 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
3.70E-37
1.90E-24
7.80E-13
WP_003355862.1 94410 95061 + 216PF02163Peptidase_M50Peptidase family M501.40E-11
WP_012705195.1 95313 96405 + 363PF07730HisKA_3Histidine kinase5.70E-16
WP_041173618.1 96546 97203 + 218PF00072
PF00196
PF08281
PF13412
Response_reg
GerE
Sigma70_r4_2
HTH_24
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
1.40E-25
1.20E-16
9.40E-05
8.50E-04

Results for WP_061315999.1 [Clostridium botulinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_061315995.1 628455 628305 - 49NO PFAM MATCH---
WP_061315996.1 628972 629782 + 269PF11155DUF2935Domain of unknown function (DUF2935)1.70E-59
WP_003356252.1 630568 631945 + 458PF02562
PF13638
PF13604
PF13245
PF13086
PhoH
PIN_4
AAA_30
AAA_19
AAA_11
PhoH-like protein
PIN domain
AAA domain
AAA domain
AAA domain
1.40E-48
4.00E-34
9.00E-09
5.20E-08
2.30E-06
WP_061315997.1 632212 633217 + 334PF09992NAGPAPhosphodiester glycosidase6.70E-48
WP_003356452.1 633226 634243 + 338NO PFAM MATCH---
WP_003357148.1 634562 634736 + 57NO PFAM MATCH---
WP_012705242.1 634900 635857 + 318PF00881NitroreductaseNitroreductase family1.30E-21
WP_061315998.1 635860 636943 + 360NO PFAM MATCH---
WP_061315999.1 636958 638317 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-48
WP_011987483.1 638291 638930 + 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.20E-11
WP_012705058.1 638937 639666 + 242PF19393DUF5968Family of unknown function (DUF5968)8.30E-69
WP_012705529.1 639974 640907 + 310PF00005
PF13304
PF13555
PF13732
ABC_tran
AAA_21
AAA_29
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
Domain of unknown function (DUF4162)
5.40E-35
1.80E-10
7.10E-04
8.80E-04
WP_012704088.1 640918 642043 + 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
9.90E-33
2.10E-23
6.90E-14
5.10E-05
WP_012704563.1 642044 643187 + 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
3.70E-37
1.90E-24
7.80E-13
WP_003355862.1 643430 644081 + 216PF02163Peptidase_M50Peptidase family M501.40E-11
WP_012705195.1 644333 645425 + 363PF07730HisKA_3Histidine kinase5.70E-16
WP_041173618.1 645566 646223 + 218PF00072
PF00196
PF08281
PF13412
Response_reg
GerE
Sigma70_r4_2
HTH_24
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
1.40E-25
1.20E-16
9.40E-05
8.50E-04

Results for WP_000627618.1 back to top

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Couldn't process WP_000627618.1 Genbank filestream. May be corrupt.

Results for WP_006962607.1 [Vibrio sp. THAF191c] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_152472237.1 2118809 2117072 - 578NO PFAM MATCH---
WP_152472238.1 2120770 2119168 - 533PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.10E-144
WP_045984795.1 2121874 2120884 - 329PF01244Peptidase_M19Membrane dipeptidase (Peptidase family M19)5.90E-73
WP_006962602.1 2123401 2121940 - 486PF00171AldedhAldehyde dehydrogenase family2.30E-148
WP_006962603.1 2123864 2123465 - 132PF01042Ribonuc_L-PSPEndoribonuclease L-PSP3.00E-22
WP_006962604.1 2124019 2124916 + 298PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
8.70E-38
2.30E-16
WP_006962605.1 2126183 2125088 - 364NO PFAM MATCH---
WP_006962606.1 2126854 2127676 + 273NO PFAM MATCH---
WP_006962607.1 2127681 2128872 + 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-30
WP_236612201.1 2128994 2129618 + 207PF00881NitroreductaseNitroreductase family1.10E-18
WP_006962609.1 2130473 2129750 - 240PF00561
PF12697
PF12146
PF00975
PF12695
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Thioesterase
Abhydrolase_5
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
Thioesterase domain
Alpha/beta hydrolase family
7.40E-14
1.80E-13
1.30E-12
1.80E-08
2.20E-05
WP_006962610.1 2131479 2130483 - 331PF07883
PF00190
PF11699
Cupin_2
Cupin_1
CENP-C_C
Cupin domain
Cupin
Mif2/CENP-C like
2.00E-10
2.60E-08
5.00E-05
WP_006962611.1 2132300 2131565 - 244PF13561
PF00106
PF08659
PF01370
PF16363
adh_short_C2
adh_short
KR
Epimerase
GDP_Man_Dehyd
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
5.70E-51
3.80E-46
8.90E-11
2.30E-08
2.00E-04
WP_006962612.1 2133594 2132301 - 430PF00815Histidinol_dhHistidinol dehydrogenase3.10E-143
WP_006962613.1 2133883 2134633 + 249PF03328HpcH_HpaIHpcH/HpaI aldolase/citrate lyase family2.10E-31
WP_019277689.1 2134782 2135745 + 320PF13377
PF00532
PF13407
PF00356
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
1.00E-29
3.30E-20
1.30E-12
2.80E-09
WP_152472239.1 2136213 2137188 + 324PF07366
PF12680
SnoaL
SnoaL_2
SnoaL-like polyketide cyclase
SnoaL-like domain
1.10E-15
6.00E-09

Results for WP_027958058.1 [Halomonas sp. Choline-3u-9] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_027958054.1 74732 75476 + 247NO PFAM MATCH---
WP_009287351.1 75476 76409 + 310PF03956Lys_exportLysine exporter LysO3.30E-51
WP_027958055.1 76490 77720 + 409PF07670GateNucleoside recognition6.70E-11
WP_009287352.1 77883 78750 + 288PF00892EamAEamA-like transporter family8.90E-33
WP_022522322.1 79769 78755 - 337PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.40E-57
1.40E-21
WP_022522321.1 81275 79811 - 487PF01235Na_Ala_sympSodium:alanine symporter family1.30E-150
WP_022522320.1 81676 81460 - 71PF11391DUF2798Protein of unknown function (DUF2798)2.80E-20
WP_027958057.1 81776 82679 + 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.60E-28
4.80E-17
WP_027958058.1 84942 82758 - 727PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.10E-75
1.30E-75
6.20E-09
WP_027958059.1 85756 85114 - 213PF00440TetR_NBacterial regulatory proteins, tetR family2.80E-13
WP_027958060.1 85837 87109 + 423PF00109
PF02801
PF00108
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
Thiolase, N-terminal domain
1.50E-58
3.80E-31
1.60E-04
WP_027958061.1 88055 87170 - 294PF00561
PF12697
Abhydrolase_1
Abhydrolase_6
alpha/beta hydrolase fold
Alpha/beta hydrolase family
5.20E-19
2.20E-10
WP_009287358.1 89057 88172 - 294PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.20E-39
5.40E-17
WP_027958062.1 89179 90190 + 336PF13602
PF00107
PF08240
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
3.40E-22
6.80E-13
1.90E-08
WP_022522313.1 90298 91102 + 267PF13443
PF13560
HTH_26
HTH_31
Cro/C1-type HTH DNA-binding domain
Helix-turn-helix domain
1.20E-05
1.70E-05
WP_027958063.1 91719 91128 - 196PF16925
PF00440
TetR_C_13
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.00E-36
8.40E-15
WP_009287360.1 92128 93343 + 404PF13437
PF16576
HlyD_3
HlyD_D23
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
1.20E-13
3.20E-11

Results for WP_010683653.1 [Methylobacterium mesophilicum SR1.6/6] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010683661.1 819594 817119 - 824PF00122
PF00702
PF00403
PF08282
PF12710
E1-E2_ATPase
Hydrolase
HMA
Hydrolase_3
HAD
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
Heavy-metal-associated domain
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
3.80E-54
6.20E-50
6.00E-28
8.80E-06
1.10E-04
WP_010683660.1 820047 820649 + 200INFERRED GENE---
WP_010683659.1 821905 820639 - 421PF02518
PF00512
PF13188
PF08448
HATPase_c
HisKA
PAS_8
PAS_4
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS domain
PAS fold
7.10E-24
3.90E-17
3.40E-05
3.60E-04
WP_010683658.1 823010 821924 - 361PF03706LPG_synthase_TMLysylphosphatidylglycerol synthase TM region8.90E-14
WP_010683657.1 823791 823161 - 209PF03167UDGUracil DNA glycosylase superfamily3.70E-09
WP_010683656.1 824539 823780 - 252PF02585PIG-LGlcNAc-PI de-N-acetylase3.10E-17
WP_010683655.1 825965 824726 - 412PF00534
PF13692
PF13579
PF13439
PF13524
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Glyco_transf_4
Glyco_trans_1_2
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
Glycosyltransferase Family 4
Glycosyl transferases group 1
4.40E-28
7.70E-26
5.30E-18
4.70E-16
4.10E-10
WP_010683654.1 826997 826124 - 290PF01261AP_endonuc_2Xylose isomerase-like TIM barrel2.10E-32
WP_010683653.1 828595 826993 - 533PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-52
WP_010683652.1 829814 828818 - 331PF01408
PF02894
GFO_IDH_MocA
GFO_IDH_MocA_C
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
6.00E-24
2.10E-16
WP_010683651.1 831004 829813 - 396PF13489
PF08241
PF13649
PF08242
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.40E-12
1.20E-08
1.60E-07
2.60E-04
WP_051072168.1 831978 831048 - 309NO PFAM MATCH---
WP_010683649.1 833391 832200 - 396PF07994
PF01658
NAD_binding_5
Inos-1-P_synth
Myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase
7.00E-62
1.60E-32
WP_010683648.1 833727 835011 + 427PF01464SLTTransglycosylase SLT domain1.50E-06
WP_039893090.1 836865 835206 - 552PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
4.10E-55
1.20E-12
WP_010683646.1 838124 836861 - 420PF13533
PF16576
PF13437
PF00529
Biotin_lipoyl_2
HlyD_D23
HlyD_3
CusB_dom_1
Biotin-lipoyl like
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Cation efflux system protein CusB domain 1
2.80E-16
1.00E-12
1.20E-10
8.80E-06
WP_010683645.1 838318 838957 + 212PF03729DUF308Short repeat of unknown function (DUF308)4.40E-27

Results for WP_074359801.1 [Methanothermobacter sp. THM-1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_074359278.1 1268551 1267138 - 470PF00171AldedhAldehyde dehydrogenase family8.20E-161
WP_074359279.1 1268750 1268561 - 62PF04021Class_IIIsignalClass III signal peptide1.00E-04
WP_074359280.1 1269723 1268781 - 313PF00482T2SSFType II secretion system (T2SS), protein F5.00E-23
WP_238337876.1 1270866 1269873 - 330PF00557
PF01321
Peptidase_M24
Creatinase_N
Metallopeptidase family M24
Creatinase/Prolidase N-terminal domain
6.60E-55
3.10E-08
WP_238337877.1 1271469 1271109 - 119NO PFAM MATCH---
WP_074359281.1 1271603 1272734 + 376PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
4.90E-120
1.10E-18
WP_074359282.1 1272796 1273900 + 367PF07568
PF13426
PF00989
PF13188
PF08448
HisKA_2
PAS_9
PAS
PAS_8
PAS_4
Histidine kinase
PAS domain
PAS fold
PAS domain
PAS fold
5.90E-31
6.40E-12
5.80E-11
1.20E-09
6.20E-07
WP_074359283.1 1274026 1274602 + 191PF02163Peptidase_M50Peptidase family M507.90E-06
WP_074359801.1 1274644 1275832 + 395PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-91
WP_191216110.1 1276046 1276691 + 214PF07812TfuATfuA-like protein3.30E-44
WP_074359802.1 1276770 1277841 + 356PF06508
PF01171
QueC
ATP_bind_3
Queuosine biosynthesis protein QueC
PP-loop family
3.30E-06
8.90E-05
WP_238338021.1 1278351 1277928 - 140NO PFAM MATCH---
WP_074359286.1 1279183 1278337 - 281PF00571CBSCBS domain1.20E-46
WP_074359287.1 1279649 1279217 - 143PF00582UspUniversal stress protein family5.00E-39
WP_074359288.1 1280803 1279654 - 382PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
9.10E-42
6.20E-11
WP_074359803.1 1282234 1280902 - 443PF18911
PF00801
PF07705
PKD_4
PKD
CARDB
PKD domain
PKD domain
CARDB
6.20E-20
3.40E-15
6.20E-09
WP_191216111.1 1285548 1282368 - 1059PF02786
PF02787
PF02222
PF07478
PF02142
CPSase_L_D2
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
MGS
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATP-grasp domain
D-ala D-ala ligase C-terminus
MGS-like domain
1.70E-120
1.90E-26
3.90E-19
1.00E-18
3.10E-18

Results for WP_021073370.1 [haloarchaeon 3A1-DGR] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021073362.1 2350796 2351174 + 125PF01287eIF-5aEukaryotic elongation factor 5A hypusine, DNA-binding OB fold4.20E-04
WP_021073363.1 2351179 2352001 + 273PF00491ArginaseArginase family2.20E-54
WP_021073364.1 2352901 2352067 - 277PF02540
PF03054
NAD_synthase
tRNA_Me_trans
NAD synthase
tRNA methyl transferase HUP domain
1.60E-78
6.00E-05
WP_021073365.1 2353712 2352995 - 238PF00293NUDIXNUDIX domain8.90E-16
WP_021073366.1 2354130 2353704 - 141NO PFAM MATCH---
WP_021073367.1 2354319 2355291 + 323PF19100DUF5787Family of unknown function (DUF5787)5.50E-101
WP_021073368.1 2356146 2355315 - 276PF12706Lactamase_B_2Beta-lactamase superfamily domain4.00E-17
WP_021073369.1 2356377 2357751 + 457PF02403
PF00587
Seryl_tRNA_N
tRNA-synt_2b
Seryl-tRNA synthetase N-terminal domain
tRNA synthetase class II core domain (G, H, P, S and T)
4.60E-28
5.40E-28
WP_021073370.1 2357859 2359704 + 614PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-42
WP_021073371.1 2360770 2359783 - 328PF00924MS_channelMechanosensitive ion channel6.60E-33
WP_021073372.1 2360878 2361619 + 246PF09754PAC2PAC2 family2.90E-35
WP_021073373.1 2362686 2361747 - 312PF00892EamAEamA-like transporter family1.10E-32
WP_021073374.1 2362905 2363388 + 160PF01037
PF13412
PF09339
PF12840
AsnC_trans_reg
HTH_24
HTH_IclR
HTH_20
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
IclR helix-turn-helix domain
Helix-turn-helix domain
2.90E-12
5.00E-05
3.90E-04
4.30E-04
WP_021073375.1 2365288 2363419 - 622PF02934
PF02637
PF02938
GatB_N
GatB_Yqey
GAD
GatB/GatE catalytic domain
GatB domain
GAD domain
2.00E-67
5.00E-22
2.40E-14
WP_021073376.1 2365499 2366039 + 179PF19134DUF5817Domain of unknown function (DUF5817)1.40E-19
WP_039400827.1 2366226 2366577 + 116NO PFAM MATCH---
WP_021074807.1 2367610 2366641 - 322PF17835
PF06858
PF01926
PF02421
PF00350
NOG1_N
NOG1
MMR_HSR1
FeoB_N
Dynamin_N
NOG1 N-terminal helical domain
Nucleolar GTP-binding protein 1 (NOG1)
50S ribosome-binding GTPase
Ferrous iron transport protein B
Dynamin family
5.80E-41
6.40E-22
2.10E-21
5.40E-12
1.50E-04

Results for WP_006601557.1 [Haloferax alexandrinus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_144858766.1 3582536 3582917 + 126PF19137DUF5820Family of unknown function (DUF5820)2.80E-53
WP_004061267.1 3582941 3583391 + 149PF03684UPF0179Uncharacterised protein family (UPF0179)3.60E-48
WP_004061266.1 3584345 3583478 - 288PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase family2.20E-10
WP_115802769.1 3584950 3584464 - 161PF03745DUF309Domain of unknown function (DUF309)2.00E-15
WP_004061265.1 3586279 3586009 - 89NO PFAM MATCH---
WP_004061264.1 3586370 3587168 + 265PF00459Inositol_PInositol monophosphatase family1.60E-48
WP_004061263.1 3587283 3587754 + 156PF13404
PF13412
PF01037
PF12840
PF12802
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
MarR_2
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Lrp/AsnC ligand binding domain
Helix-turn-helix domain
MarR family
1.10E-16
1.20E-16
1.90E-15
5.70E-08
4.80E-07
WP_006601556.1 3587888 3589007 + 372PF01889DUF63Membrane protein of unknown function DUF635.70E-36
WP_006601557.1 3590911 3589222 - 562PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-57
WP_004061260.1 3591788 3590960 - 275PF19138DUF5821Family of unknown function (DUF5821)1.00E-94
WP_004061258.1 3592154 3593402 + 415PF00464
PF00155
PF01212
SHMT
Aminotran_1_2
Beta_elim_lyase
Serine hydroxymethyltransferase
Aminotransferase class I and II
Beta-eliminating lyase
4.50E-153
5.80E-09
6.20E-06
WP_004044679.1 3593500 3593800 + 99PF02680DUF211Uncharacterized ArCR, COG18884.80E-34
WP_006601559.1 3593799 3594369 + 189PF01988VIT1VIT family1.00E-08
WP_004044681.1 3594468 3595362 + 297PF02882
PF00763
THF_DHG_CYH_C
THF_DHG_CYH
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1.20E-67
6.40E-37
WP_006601560.1 3595677 3595443 - 77NO PFAM MATCH---
WP_163489565.1 3596446 3595735 - 236PF01155HypAHydrogenase/urease nickel incorporation, metallochaperone, hypA8.60E-04
WP_004061251.1 3596590 3596737 + 48NO PFAM MATCH---

Results for WP_016468333.1 [Streptomyces albus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016468341.1 5817872 5818739 + 288PF001982-oxoacid_dh2-oxoacid dehydrogenases acyltransferase (catalytic domain)1.40E-14
WP_019358474.1 5818635 5819469 + 278INFERRED GENE---
WP_037613461.1 5819962 5821231 + 422PF01494
PF01266
PF12831
PF13450
PF07992
FAD_binding_3
DAO
FAD_oxidored
NAD_binding_8
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
1.20E-29
1.00E-08
5.20E-06
2.20E-04
3.10E-04
WP_135566597.1 5821227 5822358 + 376PF06500FrsA-likeEsterase FrsA-like5.60E-12
WP_135566598.1 5822354 5822732 + 125PF14079DUF4260Domain of unknown function (DUF4260)2.20E-09
WP_051173454.1 5824083 5822832 - 416PF00067p450Cytochrome P4501.20E-38
WP_016468335.1 5824242 5824848 + 201PF00072
PF00196
Response_reg
GerE
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
8.30E-19
9.60E-15
WP_157846433.1 5826027 5824869 - 385PF07730HisKA_3Histidine kinase7.60E-17
WP_016468333.1 5828475 5826159 - 771PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-101
WP_016468332.1 5828876 5828501 - 124NO PFAM MATCH---
WP_016468331.1 5829173 5830037 + 287PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
1.80E-46
1.90E-09
WP_016468330.1 5830149 5830974 + 274PF00975ThioesteraseThioesterase domain1.70E-29
WP_016468329.1 5831117 5831990 + 290PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
6.80E-50
1.40E-08
WP_234029747.1 5833005 5832771 - 77PF19565DUF6087Family of unknown function (DUF6087)2.10E-08
WP_016468327.1 5833195 5833405 + 69PF04149DUF397Domain of unknown function (DUF397)1.50E-19
WP_030406240.1 5833984 5833528 - 151PF08592Anthrone_oxyAnthrone oxygenase1.30E-08
WP_016468325.1 5834376 5833995 - 126PF04486
PF04673
SchA_CurD
Cyclase_polyket
SchA/CurD like domain
Polyketide synthesis cyclase
1.20E-49
1.90E-04

Results for WP_004203400.1 back to top

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Couldn't process WP_004203400.1 Genbank filestream. May be corrupt.

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194824.1 back to top

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Couldn't process WP_000194824.1 Genbank filestream. May be corrupt.

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_011233085.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001538156.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001538156.1 back to top

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Couldn't process WP_001538156.1 Genbank filestream. May be corrupt.

Results for WP_001345655.1 back to top

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Couldn't process WP_001345655.1 Genbank filestream. May be corrupt.

Results for WP_032283114.1 back to top

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Couldn't process WP_032283114.1 Genbank filestream. May be corrupt.

Results for WP_041144791.1 [Raoultella terrigena] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041144797.1 53194 51445 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
4.80E-60
1.60E-36
3.10E-10
4.10E-06
7.20E-06
WP_234578244.1 55492 53230 - 753PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
7.00E-42
1.30E-20
8.40E-05
1.80E-04
WP_004100704.1 55989 55701 - 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.10E-08
9.30E-05
WP_004860074.1 57814 56140 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-98
2.30E-11
9.10E-07
WP_041144795.1 58633 57949 - 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
1.30E-81
2.70E-07
WP_115193237.1 60110 58826 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.10E-150
WP_041144793.1 61271 60182 - 362PF00266Aminotran_5Aminotransferase class-V5.40E-68
WP_234578246.1 62275 61582 - 230PF04239DUF421Protein of unknown function (DUF421)4.70E-13
WP_041144791.1 62413 64174 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.70E-83
5.30E-67

Results for WP_011970844.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_014622424.1 [Streptococcus equi subsp. zooepidemicus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014622433.1 19067 20153 + 361NO PFAM MATCH---
WP_161572724.1 20566 22423 + 618PF01391
PF08341
PF00746
Collagen
TED
Gram_pos_anchor
Collagen triple helix repeat (20 copies)
Thioester domain
LPXTG cell wall anchor motif
2.90E-42
4.00E-10
3.20E-04
WP_212573403.1 22737 23943 + 401PF08341
PF05887
TED
Trypan_PARP
Thioester domain
Procyclic acidic repetitive protein (PARP)
1.90E-12
1.90E-06
WP_014622429.1 25194 24075 - 372PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
5.30E-38
2.40E-19
3.00E-06
WP_014622428.1 26318 25190 - 375PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.50E-25
1.40E-19
9.00E-13
WP_014622427.1 27250 26326 - 307PF00005
PF13304
PF02463
PF03193
PF13555
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
RsgA GTPase
P-loop containing region of AAA domain
1.90E-33
1.60E-15
7.90E-05
8.20E-05
1.10E-04
WP_014622426.1 27959 27272 - 228PF19393DUF5968Family of unknown function (DUF5968)7.50E-22
WP_021320451.1 28627 27955 - 223PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like2.80E-08
WP_014622424.1 29960 28601 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-45
WP_014622423.1 31037 29972 - 354NO PFAM MATCH---
WP_014622422.1 31984 31033 - 316PF00881NitroreductaseNitroreductase family7.90E-15
WP_012678394.1 32376 32211 - 54NO PFAM MATCH---
WP_012515137.1 33162 32904 - 85PF05979DUF896Bacterial protein of unknown function (DUF896)5.50E-29
WP_038674487.1 35706 33666 - 679PF02092tRNA_synt_2fGlycyl-tRNA synthetase beta subunit4.50E-199
WP_014622419.1 36987 36075 - 303PF02091tRNA-synt_2eGlycyl-tRNA synthetase alpha subunit2.00E-145
WP_012515132.1 37887 37353 - 177PF04140
PF04191
ICMT
PEMT
Isoprenylcysteine carboxyl methyltransferase (ICMT) family
Phospholipid methyltransferase
2.90E-20
1.10E-05
WP_021320447.1 38821 38152 - 222PF00005
PF13304
PF02463
PF13555
ABC_tran
AAA_21
SMC_N
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
6.00E-29
1.80E-08
2.00E-07
7.50E-04

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Couldn't process WP_051422246.1 Genbank filestream. May be corrupt.

Results for WP_018105667.1 [Streptomyces sp. SID4923] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026171863.1 54562 52609 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-77
WP_018105660.1 55314 54558 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
6.20E-27
1.70E-21
WP_018105661.1 56306 55310 - 331PF00005
PF13304
PF02463
PF13175
PF13191
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
4.50E-27
3.90E-16
1.40E-07
3.20E-05
5.50E-04
WP_018105662.1 57477 56358 - 372PF02163Peptidase_M50Peptidase family M501.60E-05
WP_018105663.1 58628 57473 - 384PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.30E-89
WP_018105664.1 61390 58615 - 924PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.10E-39
WP_018105665.1 63015 61401 - 537PF00881NitroreductaseNitroreductase family2.00E-20
WP_018105666.1 64985 63068 - 638PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-78
WP_018105667.1 67260 64974 - 761PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-14
WP_202532841.1 69329 67427 - 633PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
1.80E-35
5.10E-10
7.50E-08
9.10E-07
WP_020207341.1 69792 70800 + 335PF00196
PF13384
PF13551
GerE
HTH_23
HTH_29
Bacterial regulatory proteins, luxR family
Homeodomain-like domain
Winged helix-turn helix
2.10E-07
6.90E-07
9.90E-04
WP_018105670.1 71026 70837 - 62NO PFAM MATCH---
WP_018105671.1 71662 71101 - 186NO PFAM MATCH---
WP_078498786.1 71798 72728 + 309PF02182
PF13391
PF01844
SAD_SRA
HNH_2
HNH
SAD/SRA domain
HNH endonuclease
HNH endonuclease
1.60E-32
1.40E-05
3.50E-04
WP_018105673.1 73207 72724 - 160PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
3.50E-14
1.00E-04
WP_018105674.1 74274 73269 - 334NO PFAM MATCH---
WP_018517999.1 74387 74555 + 55PF11755DUF3311Protein of unknown function (DUF3311)3.20E-13

Results for WP_032755751.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_018105666.1 [Streptomyces sp. SID4923] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018105658.1 52328 52499 + 56NO PFAM MATCH---
WP_026171863.1 54562 52609 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.30E-77
WP_018105660.1 55314 54558 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
6.20E-27
1.70E-21
WP_018105661.1 56306 55310 - 331PF00005
PF13304
PF02463
PF13175
PF13191
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
4.50E-27
3.90E-16
1.40E-07
3.20E-05
5.50E-04
WP_018105662.1 57477 56358 - 372PF02163Peptidase_M50Peptidase family M501.60E-05
WP_018105663.1 58628 57473 - 384PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.30E-89
WP_018105664.1 61390 58615 - 924PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.10E-39
WP_018105665.1 63015 61401 - 537PF00881NitroreductaseNitroreductase family2.00E-20
WP_018105666.1 64985 63068 - 638PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-78
WP_018105667.1 67260 64974 - 761PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-14
WP_202532841.1 69329 67427 - 633PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
1.80E-35
5.10E-10
7.50E-08
9.10E-07
WP_020207341.1 69792 70800 + 335PF00196
PF13384
PF13551
GerE
HTH_23
HTH_29
Bacterial regulatory proteins, luxR family
Homeodomain-like domain
Winged helix-turn helix
2.10E-07
6.90E-07
9.90E-04
WP_018105670.1 71026 70837 - 62NO PFAM MATCH---
WP_018105671.1 71662 71101 - 186NO PFAM MATCH---
WP_078498786.1 71798 72728 + 309PF02182
PF13391
PF01844
SAD_SRA
HNH_2
HNH
SAD/SRA domain
HNH endonuclease
HNH endonuclease
1.60E-32
1.40E-05
3.50E-04
WP_018105673.1 73207 72724 - 160PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
3.50E-14
1.00E-04
WP_018105674.1 74274 73269 - 334NO PFAM MATCH---

Results for WP_018536604.1 [Streptomyces sp. SID8354] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026246997.1 635079 635667 + 195NO PFAM MATCH---
WP_234024991.1 635981 636359 + 125PF14016DUF4232Protein of unknown function (DUF4232)3.50E-08
WP_016572550.1 636536 636836 + 100INFERRED GENE---
WP_078507867.1 636974 637625 + 216PF13399LytR_CLytR cell envelope-related transcriptional attenuator3.10E-17
WP_018536600.1 638330 637694 - 211PF14681
PF00156
UPRTase
Pribosyltran
Uracil phosphoribosyltransferase
Phosphoribosyl transferase domain
6.70E-65
7.10E-13
WP_202487582.1 638527 639070 + 180NO PFAM MATCH---
WP_018536602.1 639137 639638 + 166PF14437
PF00383
PF14439
MafB19-deam
dCMP_cyt_deam_1
Bd3614-deam
MafB19-like deaminase
Cytidine and deoxycytidylate deaminase zinc-binding region
Bd3614-like deaminase
2.20E-29
2.80E-25
2.00E-04
WP_018536603.1 641088 639912 - 391PF00881NitroreductaseNitroreductase family1.00E-15
WP_018536604.1 643282 641164 - 705PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-68
WP_018536605.1 643497 643377 - 39NO PFAM MATCH---
WP_018536606.1 644383 643900 - 160PF17410StevorSubtelomeric Variable Open Reading frame1.60E-04
WP_018536607.1 645191 644411 - 259PF09900
PF11143
DUF2127
DUF2919
Predicted membrane protein (DUF2127)
Protein of unknown function (DUF2919)
1.60E-44
3.10E-04
WP_018536608.1 645830 645995 + 54NO PFAM MATCH---
WP_202487583.1 646103 646385 + 93PF07876DabbStress responsive A/B Barrel Domain2.40E-18
WP_017946190.1 646671 647442 + 257INFERRED GENE---
WP_026246999.1 647632 648472 + 279PF04545
PF04542
PF04539
PF08281
PF13384
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma-70, region 4
Sigma-70 region 2
Sigma-70 region 3
Sigma-70, region 4
Homeodomain-like domain
4.50E-20
2.70E-17
3.60E-11
1.20E-09
1.10E-04
WP_234024974.1 649077 649494 + 138NO PFAM MATCH---

Results for WP_028417598.1 [Streptomyces sp. SID8359] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018492802.1 350646 350229 - 138PF03259Robl_LC7Roadblock/LC7 domain7.50E-23
WP_032755502.1 352628 350753 - 624PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase2.20E-10
WP_181398438.1 354617 353150 - 488PF07690
PF06609
PF00083
PF13347
MFS_1
TRI12
Sugar_tr
MFS_2
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
MFS/sugar transport protein
1.10E-49
4.20E-14
6.00E-11
6.70E-06
WP_202484501.1 355482 356325 + 280PF00005
PF02463
PF13304
PF13555
PF03193
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RsgA GTPase
4.40E-32
3.50E-06
3.00E-05
5.90E-05
3.30E-04
WP_028417594.1 356321 358907 + 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
2.80E-37
2.10E-21
WP_028417595.1 359332 359626 + 97NO PFAM MATCH---
WP_028417596.1 359642 361637 + 664PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
7.70E-36
6.10E-08
3.30E-06
4.70E-06
WP_028417597.1 361643 363995 + 783NO PFAM MATCH---
WP_028417598.1 363984 365964 + 659PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-82
WP_028417599.1 366031 367630 + 532PF00881NitroreductaseNitroreductase family2.50E-20
WP_028417600.1 367644 370620 + 991PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.30E-45
WP_237552167.1 370715 371672 + 318PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.20E-88
WP_202484504.1 371752 372814 + 353PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.90E-06
4.60E-04
WP_202484430.1 372862 373855 + 330PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.60E-29
1.10E-14
1.50E-05
2.10E-04
WP_028417604.1 373929 374685 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
5.00E-29
2.40E-20
WP_028417605.1 374681 376679 + 665PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-79
WP_018492818.1 376954 376777 - 58NO PFAM MATCH---

Results for WP_028417605.1 [Streptomyces sp. SID8359] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028417597.1 361643 363995 + 783NO PFAM MATCH---
WP_028417598.1 363984 365964 + 659PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-82
WP_028417599.1 366031 367630 + 532PF00881NitroreductaseNitroreductase family2.50E-20
WP_028417600.1 367644 370620 + 991PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.30E-45
WP_237552167.1 370715 371672 + 318PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.20E-88
WP_202484504.1 371752 372814 + 353PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.90E-06
4.60E-04
WP_202484430.1 372862 373855 + 330PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.60E-29
1.10E-14
1.50E-05
2.10E-04
WP_028417604.1 373929 374685 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
5.00E-29
2.40E-20
WP_028417605.1 374681 376679 + 665PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-79
WP_018492818.1 376954 376777 - 58NO PFAM MATCH---
WP_050451336.1 377269 378547 + 425PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
2.90E-21
1.20E-07
WP_018492820.1 378543 378798 + 84NO PFAM MATCH---
WP_032755622.1 380018 379037 - 326PF00196GerEBacterial regulatory proteins, luxR family2.30E-05
WP_028417607.1 380648 384182 + 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.20E-31
1.70E-24
5.10E-21
1.10E-16
1.20E-15
WP_018961357.1 384256 384649 + 131INFERRED GENE---
WP_028417609.1 384789 385326 + 178PF07702UTRAUTRA domain3.90E-25
WP_028417610.1 385322 386102 + 259PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.00E-20
8.60E-16

Results for WP_028417597.1 [Streptomyces sp. SID8359] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028417590.1 350233 349879 - 117PF05331DUF742Protein of unknown function (DUF742)4.90E-39
WP_018492802.1 350646 350229 - 138PF03259Robl_LC7Roadblock/LC7 domain7.50E-23
WP_032755502.1 352628 350753 - 624PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase2.20E-10
WP_181398438.1 354617 353150 - 488PF07690
PF06609
PF00083
PF13347
MFS_1
TRI12
Sugar_tr
MFS_2
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
MFS/sugar transport protein
1.10E-49
4.20E-14
6.00E-11
6.70E-06
WP_202484501.1 355482 356325 + 280PF00005
PF02463
PF13304
PF13555
PF03193
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RsgA GTPase
4.40E-32
3.50E-06
3.00E-05
5.90E-05
3.30E-04
WP_028417594.1 356321 358907 + 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
2.80E-37
2.10E-21
WP_028417595.1 359332 359626 + 97NO PFAM MATCH---
WP_028417596.1 359642 361637 + 664PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
7.70E-36
6.10E-08
3.30E-06
4.70E-06
WP_028417597.1 361643 363995 + 783NO PFAM MATCH---
WP_028417598.1 363984 365964 + 659PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-82
WP_028417599.1 366031 367630 + 532PF00881NitroreductaseNitroreductase family2.50E-20
WP_028417600.1 367644 370620 + 991PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.30E-45
WP_237552167.1 370715 371672 + 318PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.20E-88
WP_202484504.1 371752 372814 + 353PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
1.90E-06
4.60E-04
WP_202484430.1 372862 373855 + 330PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.60E-29
1.10E-14
1.50E-05
2.10E-04
WP_028417604.1 373929 374685 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
5.00E-29
2.40E-20
WP_028417605.1 374681 376679 + 665PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.90E-79

Results for WP_018090377.1 [Streptomyces sp. SID8375] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_129298289.1 4922 5006 + 27NO PFAM MATCH---
WP_018090370.1 5568 6147 + 192PF00440TetR_NBacterial regulatory proteins, tetR family1.00E-18
WP_018090371.1 6934 6208 - 241PF20401
PF01694
Rhomboid_2
Rhomboid
Rhomboid-like protein
Rhomboid family
1.50E-21
5.60E-05
WP_202443991.1 7419 8784 + 454PF07905
PF13556
PF17853
PucR
HTH_30
GGDEF_2
Purine catabolism regulatory protein-like family
PucR C-terminal helix-turn-helix domain
GGDEF-like domain
3.90E-21
2.70E-19
2.10E-07
WP_018090373.1 8992 10480 + 495PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin9.80E-67
WP_018090374.1 10559 11855 + 432INFERRED GENE---
WP_018090375.1 12205 12622 + 138PF02566OsmCOsmC-like protein5.70E-16
WP_018090376.1 12793 14260 + 488PF00196
PF13191
PF13401
PF04545
PF13671
GerE
AAA_16
AAA_22
Sigma70_r4
AAA_33
Bacterial regulatory proteins, luxR family
AAA ATPase domain
AAA domain
Sigma-70, region 4
AAA domain
8.80E-10
5.20E-09
5.00E-05
3.50E-04
9.50E-04
WP_018090377.1 14441 15758 + 438PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-54
WP_018090378.1 16390 16540 + 49NO PFAM MATCH---
WP_018090379.1 16743 17202 + 152NO PFAM MATCH---
WP_237503590.1 17392 18397 + 334PF02518
PF00512
PF00672
PF13589
HATPase_c
HisKA
HAMP
HATPase_c_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
HAMP domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
2.10E-22
5.80E-11
7.30E-08
1.40E-04
WP_018090381.1 18605 19319 + 237PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
1.70E-26
1.50E-25
WP_158686040.1 20724 19437 - 428PF06500
PF00561
PF12146
PF02129
PF00326
FrsA-like
Abhydrolase_1
Hydrolase_4
Peptidase_S15
Peptidase_S9
Esterase FrsA-like
alpha/beta hydrolase fold
Serine aminopeptidase, S33
X-Pro dipeptidyl-peptidase (S15 family)
Prolyl oligopeptidase family
2.00E-68
1.60E-09
7.30E-07
1.40E-06
3.30E-06
WP_018090383.1 21094 22258 + 387NO PFAM MATCH---
WP_018090384.1 22317 23097 + 259PF07987DUF1775Domain of unkown function (DUF1775)1.30E-48
WP_237503592.1 23248 24439 + 396PF04261Dyp_peroxDyp-type peroxidase family1.70E-96

Results for WP_018090000.1 [Streptomyces libani] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_093642070.1 106954 105019 - 644PF13520
PF00324
PF02705
AA_permease_2
AA_permease
K_trans
Amino acid permease
Amino acid permease
K+ potassium transporter
2.40E-30
2.40E-07
4.40E-05
WP_266440535.1 108428 107000 - 475PF00881NitroreductaseNitroreductase family1.40E-10
WP_159487034.1 109462 108424 - 345PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term6.80E-65
WP_266440539.1 111974 109445 - 842PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.50E-23
WP_266440541.1 112960 111970 - 329NO PFAM MATCH---
WP_266440544.1 114999 112992 - 668PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.60E-78
WP_266441005.1 116926 114985 - 646NO PFAM MATCH---
WP_018090001.1 117163 117013 - 49NO PFAM MATCH---
WP_018090000.1 117463 118648 + 394PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.80E-54
WP_266440550.1 118644 120015 + 456PF07812TfuATfuA-like protein4.10E-43
WP_266440553.1 120424 121294 + 289PF00486
PF00072
Trans_reg_C
Response_reg
Transcriptional regulatory protein, C terminal
Response regulator receiver domain
3.70E-26
2.60E-20
WP_266440556.1 121311 122034 + 240PF02518
PF00512
HATPase_c
HisKA
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
5.10E-14
1.70E-08
WP_266440559.1 122638 122065 - 190PF00583
PF13508
PF08445
PF13480
Acetyltransf_1
Acetyltransf_7
FR47
Acetyltransf_6
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
FR47-like protein
Acetyltransferase (GNAT) domain
1.30E-07
1.40E-05
1.20E-04
3.80E-04
WP_266440562.1 124939 123349 - 529PF00561
PF08386
Abhydrolase_1
Abhydrolase_4
alpha/beta hydrolase fold
TAP-like protein
8.20E-40
7.50E-33
WP_018089994.1 126593 125345 - 415PF13177
PF09115
PF00004
DNA_pol3_delta2
DNApol3-delta_C
AAA
DNA polymerase III, delta subunit
DNA polymerase III, delta subunit, C terminal
ATPase family associated with various cellular activities (AAA)
7.30E-37
5.70E-05
1.10E-04
WP_266440566.1 130293 126960 - 1110PF02223
PF07690
Thymidylate_kin
MFS_1
Thymidylate kinase
Major Facilitator Superfamily
2.40E-47
4.40E-05
WP_266440568.1 133291 130423 - 955PF01131
PF13368
PF01751
PF07382
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
DNA topoisomerase
Topoisomerase C-terminal repeat
Toprim domain
Histone H1-like nucleoprotein HC2
1.30E-131
9.10E-65
2.50E-28
1.30E-08

Results for WP_008409979.1 back to top

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Couldn't process WP_008409979.1 Genbank filestream. May be corrupt.

Results for WP_043185368.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_030310052.1 [Streptomyces albidoflavus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026048345.1 859849 860026 + 58NO PFAM MATCH---
WP_129825235.1 862119 860109 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-76
WP_003950323.1 862975 862219 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.00E-29
1.40E-21
9.30E-06
WP_003950322.1 863969 863021 - 315PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_129826367.1 865148 864020 - 375PF02163Peptidase_M50Peptidase family M505.00E-04
WP_008409260.1 866212 865144 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-96
WP_015507251.1 868944 866208 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.70E-46
WP_030310050.1 870578 868970 - 535PF00881NitroreductaseNitroreductase family5.30E-19
WP_030310052.1 872583 870630 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-81
WP_030310054.1 874795 872572 - 740NO PFAM MATCH---
WP_085479119.1 876688 874801 - 628PF03704
PF13191
PF00486
PF00931
PF05729
BTAD
AAA_16
Trans_reg_C
NB-ARC
NACHT
Bacterial transcriptional activator domain
AAA ATPase domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
NACHT domain
1.60E-38
2.30E-10
3.20E-08
1.50E-06
8.00E-04
WP_018471568.1 876930 876696 - 77NO PFAM MATCH---
WP_129804374.1 877405 878998 + 530PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
1.10E-49
2.00E-11
1.10E-10
WP_018895335.1 879569 879017 - 183PF13977
PF00440
PF16859
TetR_C_6
TetR_N
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
1.60E-21
9.50E-10
2.50E-04
WP_129826368.1 879687 880269 + 193PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
1.30E-18
1.90E-06
WP_008412116.1 881077 880309 - 255PF05630NPP1Necrosis inducing protein (NPP1)3.80E-63
WP_049977955.1 881254 881887 + 210PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.00E-37

Results for WP_018515647.1 [Streptomyces sp. SID5594] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018515639.1 124491 123705 - 261PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
4.70E-20
2.90E-15
WP_026242138.1 125027 124487 - 179PF07702UTRAUTRA domain1.90E-24
WP_018961357.1 125170 125563 + 131INFERRED GENE---
WP_018515642.1 129176 125642 - 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.20E-31
1.70E-24
5.10E-21
2.50E-16
5.10E-15
WP_043186526.1 129701 130682 + 326PF00196GerEBacterial regulatory proteins, luxR family2.50E-05
WP_018515644.1 130977 130704 - 90NO PFAM MATCH---
WP_078533268.1 132356 130973 - 460PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
6.00E-23
6.00E-11
WP_018515646.1 132565 132742 + 58NO PFAM MATCH---
WP_018515647.1 134763 132822 - 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-81
WP_018515648.1 135515 134759 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.50E-29
1.40E-20
WP_018515649.1 136525 135565 - 319PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.30E-28
3.70E-15
2.10E-05
2.10E-04
WP_018515650.1 137676 136566 - 369PF02163Peptidase_M50Peptidase family M503.30E-06
WP_018515651.1 138722 137672 - 349PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.80E-95
WP_018515652.1 141454 138718 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.20E-45
WP_018515653.1 143053 141469 - 527PF00881NitroreductaseNitroreductase family1.00E-18
WP_051104729.1 145068 143097 - 656PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-80
WP_018515655.1 147379 145057 - 773PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-12

Results for WP_051104729.1 [Streptomyces sp. SID5594] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018515646.1 132565 132742 + 58NO PFAM MATCH---
WP_018515647.1 134763 132822 - 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-81
WP_018515648.1 135515 134759 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.50E-29
1.40E-20
WP_018515649.1 136525 135565 - 319PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.30E-28
3.70E-15
2.10E-05
2.10E-04
WP_018515650.1 137676 136566 - 369PF02163Peptidase_M50Peptidase family M503.30E-06
WP_018515651.1 138722 137672 - 349PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.80E-95
WP_018515652.1 141454 138718 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.20E-45
WP_018515653.1 143053 141469 - 527PF00881NitroreductaseNitroreductase family1.00E-18
WP_051104729.1 145068 143097 - 656PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-80
WP_018515655.1 147379 145057 - 773PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-12
WP_018515656.1 149229 147384 - 614PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
7.80E-36
5.10E-08
1.80E-07
9.70E-07
WP_018515657.1 149585 149297 - 95NO PFAM MATCH---
WP_018515658.1 152532 149946 - 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.90E-37
3.20E-21
WP_007450496.1 152528 153317 + 263INFERRED GENE---
WP_199784526.1 153929 155447 + 505PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
1.30E-51
1.80E-16
1.30E-11
WP_018515661.1 156137 155456 - 226PF14016DUF4232Protein of unknown function (DUF4232)2.30E-20
WP_003968609.1 156302 156458 + 52INFERRED GENE---

Results for WP_018515655.1 [Streptomyces sp. SID5594] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018515647.1 134763 132822 - 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-81
WP_018515648.1 135515 134759 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.50E-29
1.40E-20
WP_018515649.1 136525 135565 - 319PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
1.30E-28
3.70E-15
2.10E-05
2.10E-04
WP_018515650.1 137676 136566 - 369PF02163Peptidase_M50Peptidase family M503.30E-06
WP_018515651.1 138722 137672 - 349PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.80E-95
WP_018515652.1 141454 138718 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.20E-45
WP_018515653.1 143053 141469 - 527PF00881NitroreductaseNitroreductase family1.00E-18
WP_051104729.1 145068 143097 - 656PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-80
WP_018515655.1 147379 145057 - 773PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-12
WP_018515656.1 149229 147384 - 614PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
7.80E-36
5.10E-08
1.80E-07
9.70E-07
WP_018515657.1 149585 149297 - 95NO PFAM MATCH---
WP_018515658.1 152532 149946 - 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
5.90E-37
3.20E-21
WP_007450496.1 152528 153317 + 263INFERRED GENE---
WP_199784526.1 153929 155447 + 505PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
1.30E-51
1.80E-16
1.30E-11
WP_018515661.1 156137 155456 - 226PF14016DUF4232Protein of unknown function (DUF4232)2.30E-20
WP_003968609.1 156302 156458 + 52INFERRED GENE---
GTX53_RS36485 156517 156757 + 80INFERRED GENE---

Results for WP_061319255.1 [Clostridium botulinum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_061319260.1 601896 602244 + 115NO PFAM MATCH---
WP_061319258.1 602929 603739 + 269PF11155DUF2935Domain of unknown function (DUF2935)1.20E-60
WP_011987477.1 604353 605730 + 458PF02562
PF13638
PF13604
PF13245
PF13086
PhoH
PIN_4
AAA_30
AAA_19
AAA_11
PhoH-like protein
PIN domain
AAA domain
AAA domain
AAA domain
1.40E-48
3.70E-34
9.00E-09
5.20E-08
2.30E-06
WP_033064823.1 605997 607002 + 334PF09992NAGPAPhosphodiester glycosidase5.40E-48
WP_003356452.1 607011 608028 + 338NO PFAM MATCH---
WP_003357148.1 608347 608521 + 57NO PFAM MATCH---
WP_061319257.1 608685 609642 + 318PF00881NitroreductaseNitroreductase family1.70E-21
WP_061319256.1 609645 610728 + 360NO PFAM MATCH---
WP_061319255.1 610743 612102 + 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-48
WP_061310386.1 612076 612715 + 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like4.40E-11
WP_061319254.1 612722 613451 + 242PF19393DUF5968Family of unknown function (DUF5968)1.00E-67
WP_061319253.1 613748 614681 + 310PF00005
PF13304
PF13555
ABC_tran
AAA_21
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
4.80E-35
3.70E-10
7.10E-04
WP_061319252.1 614692 615817 + 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
3.20E-34
1.40E-23
2.70E-14
6.30E-05
WP_061319251.1 615818 616961 + 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.80E-38
2.10E-24
3.40E-12
WP_011948248.1 617109 617760 + 216PF02163Peptidase_M50Peptidase family M503.80E-12
WP_061319250.1 618748 618277 - 156NO PFAM MATCH---
WP_061319249.1 620128 618865 - 420PF03600
PF02040
PF00939
PF06450
CitMHS
ArsB
Na_sulph_symp
NhaB
Citrate transporter
Arsenical pump membrane protein
Sodium:sulfate symporter transmembrane region
Bacterial Na+/H+ antiporter B (NhaB)
1.10E-56
3.00E-23
2.60E-21
1.80E-05

Results for WP_038807520.1 back to top

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Couldn't process WP_038807520.1 Genbank filestream. May be corrupt.

Results for WP_015570974.1 back to top

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Couldn't process WP_015570974.1 Genbank filestream. May be corrupt.

Results for WP_003621370.1 [Lactobacillus delbrueckii subsp. bulgaricus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076611241.1 73891 74430 + 179INFERRED GENE---
WP_003624098.1 75185 74516 - 222PF02361CbiQCobalt transport protein2.60E-14
WP_003624100.1 76550 75194 - 451PF00005
PF13304
PF02463
PF13555
PF13476
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
1.90E-48
4.30E-24
2.90E-19
6.60E-12
2.50E-10
WP_035175998.1 76852 78328 + 491PF07690
PF06609
PF00083
MFS_1
TRI12
Sugar_tr
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
8.50E-40
9.40E-13
7.00E-11
WP_003624103.1 78391 79240 + 282PF12833
PF00165
PF14525
PF02311
HTH_18
HTH_AraC
AraC_binding_2
AraC_binding
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-binding-like domain
AraC-like ligand binding domain
9.80E-15
8.40E-11
8.80E-05
1.70E-04
WP_003624105.1 79381 80314 + 310PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
3.80E-25
1.30E-10
WP_003621375.1 80310 81057 + 248PF06182ABC2_membrane_6ABC-2 family transporter protein3.30E-14
WP_003624108.1 81053 81818 + 254PF06182ABC2_membrane_6ABC-2 family transporter protein1.30E-33
WP_003621370.1 82098 83271 + 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-24
WP_003624110.1 84104 83264 - 279PF01381HTH_3Helix-turn-helix2.20E-04
WP_003624112.1 85147 84247 - 299PF01435Peptidase_M48Peptidase family M483.60E-36
WP_003621365.1 85718 85163 - 184PF04011LemALemA family3.10E-56
WP_003624114.1 87021 85875 - 381PF03600CitMHSCitrate transporter4.50E-18
WP_003624116.1 87870 88782 + 303PF01844
PF13395
HNH
HNH_4
HNH endonuclease
HNH endonuclease
6.30E-10
1.30E-07
WP_011543537.1 89011 90151 + 379PF01476
PF00877
PF01080
LysM
NLPC_P60
Presenilin
LysM domain
NlpC/P60 family
Presenilin
4.20E-34
1.40E-24
5.20E-04
WP_035176000.1 90338 90542 + 67NO PFAM MATCH---
WP_003621351.1 91540 90778 - 253PF00005
PF13304
PF02463
PF09818
PF13175
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA ATPase domain
1.70E-34
4.00E-11
3.50E-08
9.70E-05
5.80E-04

Results for WP_038803171.1 [Pseudomonas nitroreducens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024762315.1 2972202 2972892 + 229PF10979DUF2786Protein of unknown function (DUF2786)1.10E-14
WP_037006510.1 2972893 2973613 + 239PF13392HNH_3HNH endonuclease4.80E-15
WP_024762313.1 2973596 2973809 + 70NO PFAM MATCH---
WP_024762312.1 2973808 2974369 + 186PF06252GemABacteriophage Mu, GemA protein1.90E-21
WP_024762311.1 2974379 2974748 + 122PF08765MorMor transcription activator family5.90E-31
WP_024762310.1 2974780 2975104 + 107PF11985
PF13565
Phage_Mu_Gp27
HTH_32
Bacteriophage Mu, Gp27
Homeodomain-like domain
1.30E-06
3.20E-04
WP_038803170.1 2976010 2975254 - 251PF00596Aldolase_IIClass II Aldolase and Adducin N-terminal domain1.90E-40
WP_024762309.1 2977330 2976142 - 395PF03486
PF01266
PF00890
PF13738
PF07992
HI0933_like
DAO
FAD_binding_2
Pyr_redox_3
Pyr_redox_2
HI0933-like protein
FAD dependent oxidoreductase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
2.90E-151
7.60E-11
1.80E-10
1.50E-09
1.40E-07
WP_038803171.1 2977532 2979731 + 732PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.60E-75
8.10E-72
3.80E-08
WP_024762308.1 2979927 2980428 + 166PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.40E-45
WP_024762307.1 2980457 2980847 + 129PF00903GlyoxalaseGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily1.10E-08
WP_226046457.1 2980902 2981538 + 211PF01810LysELysE type translocator5.30E-30
WP_024762305.1 2981685 2982006 + 106NO PFAM MATCH---
WP_024762304.1 2982150 2982651 + 166PF08534
PF00578
Redoxin
AhpC-TSA
Redoxin
AhpC/TSA family
4.90E-27
4.60E-15
WP_024762303.1 2982884 2984183 + 432PF13533
PF16576
PF13437
Biotin_lipoyl_2
HlyD_D23
HlyD_3
Biotin-lipoyl like
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
7.30E-14
9.60E-14
9.80E-12
WP_024762302.1 2984179 2987302 + 1040PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
3.80E-10
3.80E-06
WP_038803172.1 2987301 2990418 + 1038PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
1.50E-13
1.40E-07

Results for WP_058707603.1 [Pantoea stewartii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_263758736.1 2015967 2014965 - 333PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase4.80E-118
WP_263758738.1 2017712 2015963 - 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
1.20E-59
1.40E-35
4.40E-10
1.20E-06
1.20E-04
WP_263758740.1 2020002 2017746 - 751PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.40E-51
5.80E-19
1.70E-06
WP_003849360.1 2020488 2020203 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_033737767.1 2022244 2020570 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.90E-99
8.90E-13
5.10E-07
WP_263759084.1 2023046 2022365 - 226PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.80E-83
2.70E-08
2.90E-05
4.70E-05
5.60E-04
WP_033737641.1 2024522 2023235 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.70E-151
WP_006118621.1 2025688 2024602 - 361PF00266Aminotran_5Aminotransferase class-V3.50E-64
WP_058707603.1 2025998 2027762 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.80E-84
2.90E-66
WP_033737642.1 2028139 2029000 + 286PF01226Form_Nir_transFormate/nitrite transporter6.40E-73
WP_006118617.1 2029072 2031355 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-202
8.00E-43
WP_263758748.1 2031508 2032246 + 245PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-30
1.40E-16
1.30E-04
WP_263758750.1 2033497 2032342 - 384PF07690
PF06779
PF00083
PF13347
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_2
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS/sugar transport protein
MFS_1 like family
4.40E-29
3.70E-12
6.70E-07
2.90E-04
8.70E-04
WP_039341327.1 2035107 2033814 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.40E-38
4.70E-33
WP_054634363.1 2036542 2035198 - 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
3.00E-63
3.70E-24
2.00E-16
2.50E-15
3.80E-08
WP_006118612.1 2037161 2036549 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
5.60E-59
2.00E-05
WP_263758754.1 2040805 2037343 - 1153PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
3.80E-73
7.00E-44
2.60E-28
2.20E-27
2.20E-05

Results for WP_051346497.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_060497052.1 [Pseudomonas kurunegalensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_104834591.1 51281 52946 + 554PF04820
PF01494
PF07992
Trp_halogenase
FAD_binding_3
Pyr_redox_2
Tryptophan halogenase
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
2.50E-20
1.00E-08
9.20E-05
WP_164524619.1 52945 54433 + 495PF01425AmidaseAmidase6.10E-74
WP_164524620.1 54456 55806 + 449PF00999Na_H_ExchangerSodium/hydrogen exchanger family7.10E-51
WP_164524621.1 56372 55808 - 187NO PFAM MATCH---
WP_164524622.1 57714 56421 - 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.50E-13
2.70E-04
WP_060497051.1 58139 57710 - 142PF09990DUF2231Predicted membrane protein (DUF2231)5.60E-11
WP_082426311.1 58301 58601 + 99NO PFAM MATCH---
WP_016715738.1 58949 59141 + 64INFERRED GENE---
WP_060497052.1 61427 59240 - 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.90E-73
1.50E-71
3.90E-08
WP_060497053.1 61671 62127 + 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.40E-22
2.80E-08
6.70E-05
WP_164524623.1 62126 64376 + 749PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
5.90E-34
4.80E-31
2.70E-04
WP_060497055.1 64394 65738 + 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
6.60E-26
1.20E-22
WP_060497056.1 65750 66773 + 340PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.70E-35
9.20E-24
WP_060497057.1 67562 66773 - 262PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 32.90E-26
WP_104834588.1 68386 67744 - 213PF01810LysELysE type translocator1.70E-30
WP_060497059.1 68638 68437 - 66PF06945DUF1289Protein of unknown function (DUF1289)1.40E-15
WP_060497060.1 68964 68646 - 105NO PFAM MATCH---

Results for WP_068588040.1 [Pseudomonas sp. BIOMIG1BAC] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_068588067.1 4321691 4323053 + 453PF07044
PF17131
DUF1329
LolA_like
Protein of unknown function (DUF1329)
Outer membrane lipoprotein-sorting protein
3.50E-125
5.60E-14
ATY02_RS20090 4323147 4323552 + 135INFERRED GENE---
WP_068588059.1 4323580 4324177 + 198PF14870
PF15902
PSII_BNR
Sortilin-Vps10
Photosynthesis system II assembly factor YCF48
Sortilin, neurotensin receptor 3,
7.30E-12
3.10E-06
WP_068588054.1 4324217 4324739 + 173NO PFAM MATCH---
WP_068588052.1 4324906 4326133 + 408PF00441
PF02770
PF02771
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
2.90E-43
1.30E-19
4.50E-18
8.10E-14
WP_068588048.1 4327420 4326226 - 397PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
2.10E-41
2.30E-07
WP_068588045.1 4327664 4328555 + 296PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.60E-29
3.60E-19
WP_068588043.1 4328621 4329149 + 175PF13238
PF13671
PF01202
PF01712
PF13191
AAA_18
AAA_33
SKI
dNK
AAA_16
AAA domain
AAA domain
Shikimate kinase
Deoxynucleoside kinase
AAA ATPase domain
2.70E-07
6.10E-06
1.10E-05
1.20E-04
9.60E-04
WP_068588040.1 4329260 4331465 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.40E-74
2.20E-71
5.60E-08
WP_176719795.1 4331513 4332188 + 224PF04816
PF12847
TrmK
Methyltransf_18
tRNA (adenine(22)-N(1))-methyltransferase
Methyltransferase domain
1.40E-56
3.10E-44
WP_068588034.1 4332370 4332898 + 175PF19581
PF20066
Glyoxalase_7
Glyoxalase_8
Glyoxalase superfamily protein
Glyoxalase superfamily protein
6.90E-49
8.30E-17
WP_164823750.1 4335115 4332982 - 710PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.10E-35
4.40E-16
WP_068588027.1 4336341 4335339 - 333PF01497Peripla_BP_2Periplasmic binding protein1.80E-32
WP_068588024.1 4337114 4336337 - 258PF00005
PF13304
PF02463
PF13191
PF13555
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
P-loop containing region of AAA domain
1.10E-27
1.70E-09
1.90E-07
1.60E-05
4.70E-05
WP_068588021.1 4338055 4337110 - 314PF01032FecCDFecCD transport family5.10E-37
WP_053136382.1 4338993 4338051 - 313PF01032FecCDFecCD transport family1.70E-57
WP_068588018.1 4340744 4338992 - 583PF00005
PF00664
PF02463
PF13401
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain
AAA ATPase domain
3.30E-30
9.90E-11
2.50E-10
1.20E-05
2.40E-05

Results for WP_031037058.1 [Streptomyces sp. CT1-17] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_037763440.1 50052 49170 - 293PF01791DeoCDeoC/LacD family aldolase2.40E-45
WP_224330899.1 51608 50048 - 519PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
1.10E-64
3.60E-10
WP_166624407.1 51900 53442 + 513PF00881NitroreductaseNitroreductase family9.10E-14
WP_078535764.1 53679 53856 + 58PF19409Thiopep_preThiopeptide-type bacteriocin precursor1.20E-11
WP_224327773.1 54519 53955 - 187NO PFAM MATCH---
WP_224228294.1 54646 55807 + 386NO PFAM MATCH---
WP_224228295.1 55803 58419 + 871NO PFAM MATCH---
WP_224220159.1 58421 60095 + 557NO PFAM MATCH---
WP_031037058.1 60084 62034 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-64
WP_227730769.1 62011 63568 + 518NO PFAM MATCH---
WP_051159549.1 63582 64506 + 307PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.40E-35
WP_263436258.1 64463 65756 + 430PF01494
PF13450
FAD_binding_3
NAD_binding_8
FAD binding domain
NAD(P)-binding Rossmann-like domain
2.90E-31
9.10E-05
WP_037763449.1 65752 66943 + 396PF01494
PF13450
PF01266
PF05834
FAD_binding_3
NAD_binding_8
DAO
Lycopene_cycl
FAD binding domain
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
Lycopene cyclase protein
4.10E-23
5.30E-08
4.90E-05
1.30E-04
WP_166624411.1 67824 66999 - 274PF01061
PF12698
PF12679
PF03379
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
CcmB
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
CcmB protein
1.00E-18
6.90E-12
3.80E-05
5.10E-04
WP_263436259.1 68780 67820 - 319PF00005
PF13304
PF13604
ABC_tran
AAA_21
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
4.60E-27
1.70E-13
1.50E-04
WP_037763459.1 69048 73002 + 1317PF11898
PF07717
PF04408
PF00271
PF00270
DUF3418
OB_NTP_bind
HA2
Helicase_C
DEAD
Domain of unknown function (DUF3418)
Oligonucleotide/oligosaccharide-binding (OB)-fold
Helicase associated domain (HA2)
Helicase conserved C-terminal domain
DEAD/DEAH box helicase
1.80E-223
6.00E-20
4.90E-18
2.70E-12
3.30E-06
WP_078535765.1 73513 73723 + 69PF19790DUF6274Family of unknown function (DUF6274)2.00E-27

Results for WP_062754942.1 [Parageobacillus toebii NBRC 107807] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_062755879.1 66712 68095 + 460PF05958
PF01938
PF13847
PF02475
PF13649
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Met_10
Methyltransf_25
tRNA (Uracil-5-)-methyltransferase
TRAM domain
Methyltransferase domain
Met-10+ like-protein
Methyltransferase domain
4.00E-22
3.30E-13
1.90E-12
1.10E-09
3.80E-08
WP_062755877.1 68412 69006 + 197NO PFAM MATCH---
WP_062755875.1 70659 69273 - 461PF00375SDFSodium:dicarboxylate symporter family1.90E-100
WP_062755874.1 71117 71468 + 116PF09966DUF2200Uncharacterized protein conserved in bacteria (DUF2200)5.90E-56
WP_244319639.1 72245 74288 + 680PF14947
PF14338
PF04471
HTH_45
Mrr_N
Mrr_cat
Winged helix-turn-helix
Mrr N-terminal domain
Restriction endonuclease
1.70E-13
2.20E-05
1.50E-04
WP_062754948.1 74332 74668 + 111NO PFAM MATCH---
WP_073967988.1 75376 75685 + 102NO PFAM MATCH---
WP_062754944.1 75810 77763 + 650NO PFAM MATCH---
WP_062754942.1 77762 79706 + 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-87
WP_062754940.1 79717 81298 + 526PF00881NitroreductaseNitroreductase family1.50E-15
WP_073967986.1 81564 81468 - 31PF09680YjcZ_2Family of unknown function9.20E-13
WP_062754938.1 82846 81793 - 350PF08240
PF00107
PF16912
ADH_N
ADH_zinc_N
Glu_dehyd_C
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Glucose dehydrogenase C-terminus
4.60E-35
4.20E-31
5.60E-13
WP_062679315.1 83088 83499 + 136PF00293
PF14815
NUDIX
NUDIX_4
NUDIX domain
NUDIX domain
4.50E-22
7.50E-13
WP_062754936.1 86694 83532 - 1053PF11907
PF04851
PF13091
PF00271
PF18766
DUF3427
ResIII
PLDc_2
Helicase_C
SWI2_SNF2
Domain of unknown function (DUF3427)
Type III restriction enzyme, res subunit
PLD-like domain
Helicase conserved C-terminal domain
SWI2/SNF2 ATPase
1.50E-62
1.10E-36
2.90E-15
5.10E-11
1.50E-08
WP_062754934.1 88436 87152 - 427PF01408
PF02894
PF03435
PF03447
GFO_IDH_MocA
GFO_IDH_MocA_C
Sacchrp_dh_NADP
NAD_binding_3
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
Saccharopine dehydrogenase NADP binding domain
Homoserine dehydrogenase, NAD binding domain
1.10E-17
7.40E-06
2.70E-05
1.20E-04
WP_062679318.1 88816 89860 + 347PF00483
PF12804
PF00132
NTP_transferase
NTP_transf_3
Hexapep
Nucleotidyl transferase
MobA-like NTP transferase domain
Bacterial transferase hexapeptide (six repeats)
2.40E-49
1.70E-11
3.10E-10
WP_062754932.1 89856 91074 + 405PF00534
PF13692
PF13439
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
2.90E-14
1.20E-13
1.70E-08
1.70E-04

Results for WP_037700956.1 [Streptomyces sp. DSM 40868] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_078637414.1 5595600 5595057 - 180NO PFAM MATCH---
WP_051815456.1 5596765 5595622 - 380PF12902Ferritin-likeFerritin-like2.90E-65
WP_208974441.1 5598745 5596831 - 637PF05199
PF00732
PF01266
PF13450
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
4.80E-16
1.30E-12
1.40E-05
1.50E-05
WP_051815458.1 5600736 5599059 - 558PF07992
PF13738
PF00070
PF00890
PF01266
Pyr_redox_2
Pyr_redox_3
Pyr_redox
FAD_binding_2
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
FAD binding domain
FAD dependent oxidoreductase
9.00E-27
5.30E-12
1.00E-08
2.60E-08
8.40E-07
WP_030778825.1 5601958 5601388 - 189NO PFAM MATCH---
WP_051815462.1 5602315 5603122 + 268NO PFAM MATCH---
WP_030778829.1 5603651 5603039 - 203PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
7.80E-19
5.50E-16
1.50E-04
WP_244405640.1 5604922 5603671 - 416PF07730HisKA_3Histidine kinase1.20E-14
WP_037700956.1 5607299 5605010 - 762PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.00E-97
WP_157855546.1 5607463 5607295 - 55NO PFAM MATCH---
WP_030778835.1 5608006 5608789 + 260PF03704BTADBacterial transcriptional activator domain7.50E-44
WP_014045683.1 5609101 5609209 + 36INFERRED GENE---
WP_051815464.1 5610119 5609297 - 273PF01648ACPS4'-phosphopantetheinyl transferase superfamily2.40E-10
WP_030778839.1 5611231 5610229 - 333PF02423OCD_Mu_crystallOrnithine cyclodeaminase/mu-crystallin family1.20E-28
WP_030778842.1 5612596 5611270 - 441PF04820
PF01494
PF01266
PF12831
PF07992
Trp_halogenase
FAD_binding_3
DAO
FAD_oxidored
Pyr_redox_2
Tryptophan halogenase
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
1.70E-33
8.90E-20
1.60E-12
8.30E-10
2.60E-09
WP_030778843.1 5612859 5612592 - 88NO PFAM MATCH---
WP_030778845.1 5614394 5612855 - 512PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
7.40E-86
1.20E-13

Results for WP_051816122.1 [Streptomyces sp. DSM 40868] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_030791655.1 5994563 5992910 - 550PF02868
PF01447
PF07504
Peptidase_M4_C
Peptidase_M4
FTP
Thermolysin metallopeptidase, alpha-helical domain
Thermolysin metallopeptidase, catalytic domain
Fungalysin/Thermolysin Propeptide Motif
1.10E-56
7.20E-48
9.50E-15
WP_030791658.1 5996873 5994815 - 685PF02868
PF01447
PF01483
PF07504
Peptidase_M4_C
Peptidase_M4
P_proprotein
FTP
Thermolysin metallopeptidase, alpha-helical domain
Thermolysin metallopeptidase, catalytic domain
Proprotein convertase P-domain
Fungalysin/Thermolysin Propeptide Motif
2.50E-53
6.20E-47
1.90E-21
2.50E-13
WP_244405651.1 5997260 5999333 + 690PF00664
PF00005
PF13748
ABC_membrane
ABC_tran
ABC_membrane_3
ABC transporter transmembrane region
ABC transporter
ABC transporter transmembrane region
1.70E-41
1.90E-30
3.40E-04
WP_030791663.1 5999329 6001213 + 627PF00005
PF00664
PF13191
PF06414
PF13401
ABC_tran
ABC_membrane
AAA_16
Zeta_toxin
AAA_22
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
Zeta toxin
AAA domain
1.30E-30
4.70E-29
4.90E-04
5.40E-04
9.20E-04
WP_030791666.1 6001563 6001749 + 61NO PFAM MATCH---
WP_157855646.1 6001848 6002577 + 242NO PFAM MATCH---
WP_030791673.1 6002588 6003488 + 299PF05114DUF692Protein of unknown function (DUF692)1.00E-26
WP_030791676.1 6003484 6006682 + 1065PF16861
PF02543
Carbam_trans_C
Carbam_trans_N
Carbamoyltransferase C-terminus
Carbamoyltransferase N-terminus
1.00E-63
1.70E-29
WP_051816122.1 6006674 6007931 + 418PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-66
WP_051816123.1 6007902 6008685 + 260PF07812TfuATfuA-like protein9.20E-32
WP_030791684.1 6008742 6010035 + 430PF07690MFS_1Major Facilitator Superfamily5.00E-23
WP_078637767.1 6010525 6009967 - 185PF13302
PF00583
PF13420
Acetyltransf_3
Acetyltransf_1
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
3.70E-17
2.80E-11
6.00E-10
WP_157855647.1 6011906 6010529 - 458PF08007
PF13621
JmjC_2
Cupin_8
JmjC domain
Cupin-like domain
3.10E-24
1.20E-04
WP_030791688.1 6013406 6011993 - 470PF00884
PF01663
Sulfatase
Phosphodiest
Sulfatase
Type I phosphodiesterase / nucleotide pyrophosphatase
1.60E-69
3.30E-08
WP_030791690.1 6014883 6013644 - 412PF13231PMT_2Dolichyl-phosphate-mannose-protein mannosyltransferase1.10E-05
WP_003988040.1 6014906 6015650 + 248INFERRED GENE---
WP_051816124.1 6016217 6015782 - 144NO PFAM MATCH---

Results for WP_037092735.1 [Rhizobium pusense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_037092731.1 1599155 1597922 - 410PF00480
PF01047
PF13412
PF13545
ROK
MarR
HTH_24
HTH_Crp_2
ROK family
MarR family
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
8.60E-14
1.60E-05
1.20E-04
2.50E-04
WP_004445598.1 1599396 1600437 + 346PF13407
PF00532
PF13458
PF13377
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein
Periplasmic binding protein-like domain
5.30E-60
2.30E-07
7.60E-04
8.10E-04
WP_004445596.1 1600516 1601830 + 437PF02653BPD_transp_2Branched-chain amino acid transport system / permease component3.50E-26
WP_004445595.1 1601848 1602631 + 260PF00005
PF13304
PF02463
PF09818
PF13604
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA domain
5.70E-30
4.60E-11
1.50E-06
1.20E-05
2.40E-04
WP_037092732.1 1603107 1602873 - 77NO PFAM MATCH---
WP_006697702.1 1603638 1603200 - 145PF01381
PF13560
PF12844
PF13443
HTH_3
HTH_31
HTH_19
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.30E-12
1.20E-10
3.20E-07
2.10E-06
WP_162708994.1 1604914 1603777 - 378NO PFAM MATCH---
WP_037092734.1 1605620 1604903 - 238PF07812TfuATfuA-like protein2.70E-40
WP_037092735.1 1606816 1605616 - 399PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.90E-47
WP_004445589.1 1607282 1606853 - 142NO PFAM MATCH---
WP_169692110.1 1609273 1607290 - 660PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
1.40E-19
7.10E-04
WP_004445587.1 1609405 1609897 + 163NO PFAM MATCH---
WP_037092739.1 1610031 1610370 + 112NO PFAM MATCH---
WP_037092761.1 1610770 1611685 + 304PF01261AP_endonuc_2Xylose isomerase-like TIM barrel4.30E-34
WP_037092741.1 1613162 1611764 - 465PF00722
PF00353
PF03935
Glyco_hydro_16
HemolysinCabind
SKN1_KRE6_Sbg1
Glycosyl hydrolases family 16
RTX calcium-binding nonapeptide repeat (4 copies)
Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1
2.80E-34
9.50E-10
3.30E-07
WP_004445578.1 1613433 1613916 + 160PF01272GreA_GreBTranscription elongation factor, GreA/GreB, C-term2.10E-16
WP_004445576.1 1615331 1613945 - 461PF04932Wzy_CO-Antigen ligase4.00E-07

Results for WP_004730992.1 [Acinetobacter lwoffii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004731007.1 257 1175 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.00E-14
WP_004731005.1 1675 3841 + 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
9.70E-28
2.30E-11
WP_004280329.1 4513 3904 - 202PF01914MarCMarC family integral membrane protein9.30E-14
WP_004731003.1 6578 4541 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.20E-175
WP_004731001.1 6848 7427 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_085064589.1 7448 8924 + 491PF00171AldedhAldehyde dehydrogenase family9.50E-175
WP_004730996.1 8935 10591 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
1.20E-95
1.30E-41
7.70E-04
WP_085064590.1 10718 11489 + 256NO PFAM MATCH---
WP_004730992.1 11830 14032 + 733PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.30E-75
3.40E-73
8.80E-09
WP_262458920.1 15430 14332 - 365PF05187ETF_QOElectron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S8.70E-51

Results for WP_001585523.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_227475041.1 121538 120911 - 208PF00857IsochorismataseIsochorismatase family7.10E-22
WP_000109295.1 121851 123000 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.90E-27
4.00E-10
1.00E-06
WP_000918536.1 123209 124640 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
3.80E-28
1.40E-12
WP_001242675.1 125549 124640 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.30E-33
1.20E-19
WP_001190363.1 125648 126239 + 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
2.70E-39
3.70E-12
WP_000111043.1 127061 126320 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292822.1 129535 127252 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.70E-209
1.60E-43
WP_000642546.1 130447 129589 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001585523.1 132613 130852 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.90E-83
6.30E-67
WP_000642849.1 132742 133435 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057149.1 133633 134722 + 362PF00266Aminotran_5Aminotransferase class-V3.60E-76
WP_000445231.1 134792 136076 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_001295345.1 136244 137009 + 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000125016.1 137181 137865 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 137975 139649 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 139808 140093 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000705706.1 140299 142564 + 754PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
1.90E-51
3.70E-19

Results for WP_032056762.1 back to top

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Couldn't process WP_032056762.1 Genbank filestream. May be corrupt.

Results for WP_000192965.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_016774429.1 [Pseudomonas atacamensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_263216721.1 1445 659 - 261PF14581
PF07179
SseB_C
SseB
SseB protein C-terminal domain
SseB protein N-terminal domain
1.30E-33
8.70E-22
WP_263216724.1 3808 1681 - 708PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
3.10E-27
5.10E-10
WP_263217336.1 3998 4814 + 271PF03976PPK2Polyphosphate kinase 2 (PPK2)4.60E-94
WP_073474890.1 5560 5776 + 71NO PFAM MATCH---
WP_122507046.1 5799 6189 + 129PF00903
PF18029
Glyoxalase
Glyoxalase_6
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase-like domain
7.50E-06
1.70E-04
WP_263216729.1 6192 7566 + 457PF01654Cyt_bd_oxida_ICytochrome bd terminal oxidase subunit I7.30E-145
WP_263216731.1 7578 8580 + 333PF02322Cyt_bd_oxida_IICytochrome bd terminal oxidase subunit II9.80E-79
WP_024012685.1 11193 8583 - 869PF00563
PF00990
PF05228
PF00989
PF08448
EAL
GGDEF
CHASE4
PAS
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
CHASE4 domain
PAS fold
PAS fold
8.50E-72
4.50E-48
4.60E-13
1.20E-09
5.00E-07
WP_016774429.1 11413 13618 + 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
3.80E-73
8.30E-71
7.90E-08
WP_122507051.1 14330 13835 - 164NO PFAM MATCH---
WP_016774431.1 15496 14338 - 385PF00990GGDEFDiguanylate cyclase, GGDEF domain3.10E-36
WP_024012689.1 15850 15601 - 82NO PFAM MATCH---
WP_071172043.1 16017 16659 + 213PF13230GATase_4Glutamine amidotransferases class-II2.30E-05
WP_122601616.1 16744 17086 + 113NO PFAM MATCH---
WP_263216742.1 18594 17637 - 318PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
4.20E-42
2.20E-21
WP_122880747.1 19384 18625 - 252PF00106
PF13561
PF08659
PF08643
adh_short
adh_short_C2
KR
DUF1776
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
Fungal family of unknown function (DUF1776)
3.10E-50
1.70E-41
1.90E-11
1.40E-04
WP_263216746.1 20110 19417 - 230PF01557FAA_hydrolaseFumarylacetoacetate (FAA) hydrolase family2.10E-48

Results for WP_054903954.1 [Pseudomonas juntendi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_054903949.1 2421409 2419660 - 582PF02028BCCTBCCT, betaine/carnitine/choline family transporter6.00E-177
WP_054903950.1 2421723 2422041 + 105NO PFAM MATCH---
WP_029887314.1 2422048 2422246 + 65PF06945DUF1289Protein of unknown function (DUF1289)2.60E-15
WP_054903951.1 2422487 2423276 + 262PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.50E-26
WP_235767773.1 2424317 2423297 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.30E-35
3.80E-23
WP_235767772.1 2425711 2424367 - 447PF00034
PF13442
PF09698
PF09699
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Paired_CXXCH_1
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
Doubled CXXCH motif (Paired_CXXCH_1)
1.80E-23
1.00E-22
7.60E-04
8.70E-04
WP_054903953.1 2427978 2425728 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
8.90E-35
8.50E-32
WP_009686563.1 2428433 2427977 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
6.10E-22
3.80E-08
3.00E-05
WP_054903954.1 2428677 2430864 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.90E-73
9.60E-73
3.30E-08
WP_054904035.1 2432594 2430872 - 573PF00890
PF01266
PF12831
FAD_binding_2
DAO
FAD_oxidored
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
6.80E-95
6.70E-08
2.20E-05
WP_054904036.1 2432502 2433267 + 254PF01614
PF09339
IclR
HTH_IclR
Bacterial transcriptional regulator
IclR helix-turn-helix domain
6.10E-27
6.40E-10
WP_054903955.1 2435142 2433291 - 616PF00005
PF00664
PF02463
PF01926
PF03193
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
RsgA GTPase
1.60E-36
2.00E-20
1.40E-07
6.30E-05
8.60E-05
WP_260779423.1 2435534 2436401 + 288PF00701DHDPSDihydrodipicolinate synthetase family2.00E-54
WP_235767771.1 2436530 2437424 + 297PF03466
PF00126
PF18024
LysR_substrate
HTH_1
HTH_50
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
Helix-turn-helix domain
2.20E-36
1.40E-18
8.90E-04
WP_054904037.1 2438304 2437434 - 289PF00892EamAEamA-like transporter family6.80E-24
WP_235767770.1 2438426 2439809 + 460PF00155
PF00392
PF12897
Aminotran_1_2
GntR
Asp_aminotransf
Aminotransferase class I and II
Bacterial regulatory proteins, gntR family
Aspartate amino-transferase
5.00E-37
1.00E-16
3.70E-04
WP_054903959.1 2439968 2441180 + 403PF02417Chromate_transpChromate transporter3.10E-71

Results for WP_032929136.1 back to top

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Couldn't process WP_032929136.1 Genbank filestream. May be corrupt.

Results for WP_032779532.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_051401959.1 [Mesorhizobium japonicum R7A] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
R7A2020_RS31805 3852206 3852656 + 150INFERRED GENE---
WP_069092176.1 3853065 3852750 - 104NO PFAM MATCH---
WP_032930302.1 3854346 3854601 + 84NO PFAM MATCH---
WP_032930301.1 3854597 3857402 + 934PF13704
PF01755
PF00535
PF03452
Glyco_tranf_2_4
Glyco_transf_25
Glycos_transf_2
Anp1
Glycosyl transferase family 2
Glycosyltransferase family 25 (LPS biosynthesis protein)
Glycosyl transferase family 2
Anp1
2.70E-16
7.30E-16
5.20E-09
2.60E-08
WP_065141612.1 3857605 3859042 + 478PF13489Methyltransf_23Methyltransferase domain5.60E-04
WP_019401873.1 3859863 3860175 + 104INFERRED GENE---
WP_244604540.1 3860629 3861361 + 243NO PFAM MATCH---
WP_065141613.1 3862954 3866050 + 1031PF13191
PF13401
PF00211
AAA_16
AAA_22
Guanylate_cyc
AAA ATPase domain
AAA domain
Adenylate and Guanylate cyclase catalytic domain
1.70E-12
6.90E-06
1.90E-04
WP_051401959.1 3866049 3867198 + 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.30E-47
WP_244966381.1 3867259 3867928 + 222PF07812TfuATfuA-like protein3.50E-38
WP_244966382.1 3868013 3869195 + 393NO PFAM MATCH---
WP_141245633.1 3869224 3869953 + 242NO PFAM MATCH---
WP_032930297.1 3871558 3870223 - 444NO PFAM MATCH---
WP_032930296.1 3872118 3873117 + 332PF01207DusDihydrouridine synthase (Dus)3.00E-78
WP_032930294.1 3873827 3873119 - 235PF13975
PF13650
PF00077
gag-asp_proteas
Asp_protease_2
RVP
gag-polyprotein putative aspartyl protease
Aspartyl protease
Retroviral aspartyl protease
2.30E-20
2.80E-20
5.20E-04
WP_010909481.1 3874169 3873938 - 76PF06945DUF1289Protein of unknown function (DUF1289)5.20E-21
WP_032930293.1 3874366 3875365 + 332PF02277DBI_PRTPhosphoribosyltransferase3.90E-86

Results for WP_050565969.1 [Streptomyces sp. CcalMP-8W] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018487799.1 743454 744975 + 506PF13419
PF01663
PF00702
PF12710
PF13242
HAD_2
Phosphodiest
Hydrolase
HAD
Hydrolase_like
Haloacid dehalogenase-like hydrolase
Type I phosphodiesterase / nucleotide pyrophosphatase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
1.10E-26
1.70E-20
1.70E-18
2.70E-11
4.70E-09
WP_018487800.1 745841 744971 - 289PF01116F_bP_aldolaseFructose-bisphosphate aldolase class-II1.90E-80
WP_018487801.1 746784 745899 - 294PF01380SISSIS domain4.50E-11
WP_018487802.1 749182 746971 - 736PF13245
PF00580
PF01443
PF13604
PF02562
AAA_19
UvrD-helicase
Viral_helicase1
AAA_30
PhoH
AAA domain
UvrD/REP helicase N-terminal domain
Viral (Superfamily 1) RNA helicase
AAA domain
PhoH-like protein
1.10E-13
5.30E-10
1.10E-07
2.70E-06
4.50E-06
WP_018487803.1 750322 749389 - 310PF13354
PF02113
PF00144
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Beta-lactamase enzyme family
D-Ala-D-Ala carboxypeptidase 3 (S13) family
Beta-lactamase
7.80E-52
1.40E-05
1.90E-04
WP_018487804.1 751251 750318 - 310PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
4.40E-21
4.70E-08
WP_063826500.1 751559 752480 + 306PF13354
PF00144
Beta-lactamase2
Beta-lactamase
Beta-lactamase enzyme family
Beta-lactamase
8.20E-37
4.00E-30
WP_018487806.1 754268 752501 - 588PF14028
PF00881
Lant_dehydr_C
Nitroreductase
Lantibiotic biosynthesis dehydratase C-term
Nitroreductase family
8.90E-52
3.10E-10
WP_050565969.1 756282 754335 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-69
WP_018487808.1 758243 756287 - 651NO PFAM MATCH---
WP_018487809.1 761080 758239 - 946PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.10E-22
WP_232790365.1 761401 761224 - 58PF19409Thiopep_preThiopeptide-type bacteriocin precursor6.00E-04
WP_050565970.1 774420 761754 - 4221PF00501
PF00109
PF00668
PF00550
PF00698
AMP-binding
ketoacyl-synt
Condensation
PP-binding
Acyl_transf_1
AMP-binding enzyme
Beta-ketoacyl synthase, N-terminal domain
Condensation domain
Phosphopantetheine attachment site
Acyl transferase domain
1.90E-166
1.50E-73
1.40E-68
1.20E-42
6.00E-40
WP_018487812.1 775145 774812 - 110PF03992ABMAntibiotic biosynthesis monooxygenase3.90E-16
WP_234017931.1 775641 775221 - 139NO PFAM MATCH---
WP_018487814.1 777051 775782 - 422PF00575S1S1 RNA binding domain1.50E-28
WP_018487815.1 777651 778770 + 372PF01032FecCDFecCD transport family4.00E-90

Results for WP_026238375.1 [Streptomyces sp. SID8356] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018492802.1 138047 137630 - 138PF03259Robl_LC7Roadblock/LC7 domain7.50E-23
WP_018492803.1 140029 138154 - 624PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase1.50E-10
WP_106669437.1 142041 140574 - 488PF07690
PF06609
PF00083
PF13347
MFS_1
TRI12
Sugar_tr
MFS_2
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
Sugar (and other) transporter
MFS/sugar transport protein
1.10E-49
9.30E-15
6.00E-11
6.60E-06
WP_202439619.1 142921 143764 + 280PF00005
PF02463
PF13304
PF13555
PF03193
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
RsgA GTPase
4.00E-32
3.40E-06
3.10E-05
5.90E-05
3.30E-04
WP_018492806.1 143760 146346 + 861PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
2.50E-37
4.10E-21
WP_018492807.1 146770 147061 + 96NO PFAM MATCH---
WP_018492808.1 147077 149042 + 654PF03704
PF00486
PF00931
PF13191
BTAD
Trans_reg_C
NB-ARC
AAA_16
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
AAA ATPase domain
1.00E-35
6.20E-08
5.60E-06
8.40E-06
WP_018492809.1 149047 151399 + 783PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.00E-14
WP_026238375.1 151388 153368 + 659PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.10E-83
WP_018492811.1 153424 155023 + 532PF00881NitroreductaseNitroreductase family8.70E-20
WP_018492812.1 155037 157914 + 958PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.30E-45
WP_237521931.1 158009 158966 + 318PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.60E-88
WP_202439620.1 159037 160099 + 353PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
2.20E-06
4.80E-04
WP_018492815.1 160147 161140 + 330PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.40E-29
4.20E-15
7.80E-06
1.00E-04
WP_018492816.1 161214 161970 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.10E-29
1.40E-20
WP_018492817.1 161966 163964 + 665PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.90E-80
WP_018492818.1 164239 164062 - 58NO PFAM MATCH---

Results for WP_018492817.1 [Streptomyces sp. SID8356] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018492809.1 149047 151399 + 783PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.00E-14
WP_026238375.1 151388 153368 + 659PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.10E-83
WP_018492811.1 153424 155023 + 532PF00881NitroreductaseNitroreductase family8.70E-20
WP_018492812.1 155037 157914 + 958PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.30E-45
WP_237521931.1 158009 158966 + 318PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.60E-88
WP_202439620.1 159037 160099 + 353PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
2.20E-06
4.80E-04
WP_018492815.1 160147 161140 + 330PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
5.40E-29
4.20E-15
7.80E-06
1.00E-04
WP_018492816.1 161214 161970 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.10E-29
1.40E-20
WP_018492817.1 161966 163964 + 665PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.90E-80
WP_018492818.1 164239 164062 - 58NO PFAM MATCH---
WP_050566115.1 164524 165802 + 425PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
1.60E-21
2.10E-07
WP_018492820.1 165798 166053 + 84NO PFAM MATCH---
WP_032780893.1 167239 166258 - 326PF00196GerEBacterial regulatory proteins, luxR family2.30E-05
WP_018492822.1 167886 171420 + 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.20E-31
1.60E-24
3.60E-21
1.40E-16
3.60E-15
WP_018961357.1 171494 171887 + 131INFERRED GENE---
WP_018492824.1 172027 172564 + 178PF07702UTRAUTRA domain1.50E-23
WP_018492825.1 172560 173340 + 259PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.00E-20
8.80E-16

Results for WP_037711359.1 [Streptomyces sp. SID4913] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026250407.1 123120 125409 + 762NO PFAM MATCH---
WP_018555839.1 125398 127312 + 637PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-79
WP_018555840.1 127356 128991 + 544PF00881NitroreductaseNitroreductase family2.90E-19
WP_018555841.1 129004 131779 + 924PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus8.70E-40
WP_018555842.1 131766 132930 + 387PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.50E-90
WP_018555843.1 132926 134045 + 372PF02163Peptidase_M50Peptidase family M505.00E-06
WP_018555844.1 134099 135092 + 330PF00005
PF13304
PF02463
PF13175
PF13191
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
1.20E-27
3.30E-16
1.70E-07
2.90E-05
6.00E-04
WP_018555845.1 135088 135844 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.90E-27
3.20E-21
WP_037711359.1 135888 137808 + 639PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-78
WP_018555847.1 138083 137912 - 56NO PFAM MATCH---
WP_018555848.1 138526 138355 - 56NO PFAM MATCH---
WP_018555849.1 138699 139971 + 423PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
6.90E-18
9.00E-14
WP_018555850.1 141165 140694 - 156PF00583
PF13508
PF13673
PF08445
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
1.10E-13
3.40E-09
1.30E-07
6.50E-04
WP_018555851.1 142046 141539 - 168PF13673
PF00583
PF13508
PF13420
PF08445
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Acetyltransf_4
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
4.80E-12
1.20E-10
4.60E-06
7.80E-05
1.60E-04
WP_018105647.1 143086 143957 + 290INFERRED GENE---
WP_018555854.1 144081 144438 + 118PF13564
PF13273
DoxX_2
DUF4064
DoxX-like family
Protein of unknown function (DUF4064)
4.10E-14
6.70E-04
WP_018555855.1 144447 145023 + 192INFERRED GENE---

Results for WP_018555839.1 [Streptomyces sp. SID4913] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026250406.1 115560 115305 - 84PF19857DUF6332Family of unknown function (DUF6332)2.20E-19
WP_018105651.1 117083 117919 + 278INFERRED GENE---
WP_018958785.1 117926 118118 + 64INFERRED GENE---
WP_018555834.1 120199 119191 - 335PF00196
PF13384
GerE
HTH_23
Bacterial regulatory proteins, luxR family
Homeodomain-like domain
1.60E-07
2.60E-07
WP_018555835.1 120489 120714 + 74NO PFAM MATCH---
WP_202453480.1 120792 122736 + 647PF03704
PF00486
PF00931
BTAD
Trans_reg_C
NB-ARC
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
8.80E-36
5.30E-10
6.80E-07
WP_018555837.1 123001 122743 - 85NO PFAM MATCH---
WP_026250407.1 123120 125409 + 762NO PFAM MATCH---
WP_018555839.1 125398 127312 + 637PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-79
WP_018555840.1 127356 128991 + 544PF00881NitroreductaseNitroreductase family2.90E-19
WP_018555841.1 129004 131779 + 924PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus8.70E-40
WP_018555842.1 131766 132930 + 387PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.50E-90
WP_018555843.1 132926 134045 + 372PF02163Peptidase_M50Peptidase family M505.00E-06
WP_018555844.1 134099 135092 + 330PF00005
PF13304
PF02463
PF13175
PF13191
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
1.20E-27
3.30E-16
1.70E-07
2.90E-05
6.00E-04
WP_018555845.1 135088 135844 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.90E-27
3.20E-21
WP_037711359.1 135888 137808 + 639PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-78
WP_018555847.1 138083 137912 - 56NO PFAM MATCH---

Results for WP_026250407.1 [Streptomyces sp. SID4913] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_158688923.1 113838 114282 + 147NO PFAM MATCH---
WP_026250406.1 115560 115305 - 84PF19857DUF6332Family of unknown function (DUF6332)2.20E-19
WP_018105651.1 117083 117919 + 278INFERRED GENE---
WP_018958785.1 117926 118118 + 64INFERRED GENE---
WP_018555834.1 120199 119191 - 335PF00196
PF13384
GerE
HTH_23
Bacterial regulatory proteins, luxR family
Homeodomain-like domain
1.60E-07
2.60E-07
WP_018555835.1 120489 120714 + 74NO PFAM MATCH---
WP_202453480.1 120792 122736 + 647PF03704
PF00486
PF00931
BTAD
Trans_reg_C
NB-ARC
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
8.80E-36
5.30E-10
6.80E-07
WP_018555837.1 123001 122743 - 85NO PFAM MATCH---
WP_026250407.1 123120 125409 + 762NO PFAM MATCH---
WP_018555839.1 125398 127312 + 637PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-79
WP_018555840.1 127356 128991 + 544PF00881NitroreductaseNitroreductase family2.90E-19
WP_018555841.1 129004 131779 + 924PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus8.70E-40
WP_018555842.1 131766 132930 + 387PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.50E-90
WP_018555843.1 132926 134045 + 372PF02163Peptidase_M50Peptidase family M505.00E-06
WP_018555844.1 134099 135092 + 330PF00005
PF13304
PF02463
PF13175
PF13191
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_16
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
1.20E-27
3.30E-16
1.70E-07
2.90E-05
6.00E-04
WP_018555845.1 135088 135844 + 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.90E-27
3.20E-21
WP_037711359.1 135888 137808 + 639PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-78

Results for WP_021109387.1 [Glaesserella parasuis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_035494288.1 1397660 1397339 - 106NO PFAM MATCH---
WP_026916696.1 1397908 1397656 - 83NO PFAM MATCH---
WP_149350821.1 1398146 1397927 - 72PF13710
PF13291
ACT_5
ACT_4
ACT domain
ACT domain
2.50E-21
5.30E-05
WP_160404613.1 1399816 1398157 - 552PF02776
PF02775
PF00205
PF01855
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
POR_N
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
4.40E-55
2.50E-46
6.10E-43
1.30E-05
WP_021118800.1 1400205 1400673 + 155PF04186FxsAFxsA cytoplasmic membrane protein1.30E-29
WP_021118799.1 1400815 1401805 + 329PF02774Semialdhyde_dhCSemialdehyde dehydrogenase, dimerisation domain2.20E-11
WP_160404614.1 1401877 1402918 + 346PF01594AI-2E_transportAI-2E family transporter3.30E-64
WP_160404615.1 1403083 1404397 + 437PF00860Xan_ur_permeasePermease family4.10E-86
WP_021109387.1 1406336 1404590 - 581PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-77
8.90E-63
WP_005711232.1 1407037 1406479 - 185PF01765RRFRibosome recycling factor5.90E-64
WP_005711228.1 1407166 1407745 + 192PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
2.70E-29
1.30E-09
WP_021111573.1 1408520 1407806 - 237PF00696AA_kinaseAmino acid kinase family1.10E-27
WP_043896372.1 1408660 1410205 + 514PF00884SulfataseSulfatase7.00E-26
WP_160404616.1 1410391 1411465 + 357PF00561Abhydrolase_1alpha/beta hydrolase fold3.90E-45
WP_062923877.1 1412188 1411465 - 240PF11967
PF02565
RecO_N
RecO_C
Recombination protein O N terminal
Recombination protein O C terminal
3.30E-25
8.50E-21
WP_160404617.1 1413090 1412187 - 300PF01926
PF07650
PF02421
PF00009
PF04548
MMR_HSR1
KH_2
FeoB_N
GTP_EFTU
AIG1
50S ribosome-binding GTPase
KH domain
Ferrous iron transport protein B
Elongation factor Tu GTP binding domain
AIG1 family
1.50E-23
9.20E-20
2.40E-14
1.00E-08
2.00E-08
WP_035522561.1 1413821 1413149 - 223PF14622
PF00636
PF00035
Ribonucleas_3_3
Ribonuclease_3
dsrm
Ribonuclease-III-like
Ribonuclease III domain
Double-stranded RNA binding motif
1.70E-34
8.50E-23
9.30E-15

Results for WP_010277176.1 [Pectobacterium brasiliense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010277194.1 245207 246362 + 384PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
1.20E-38
4.00E-06
5.60E-06
4.10E-05
WP_010277191.1 247289 246347 - 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
8.40E-16
1.20E-13
WP_010277188.1 247564 248869 + 434PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin4.40E-20
WP_010277186.1 248906 250016 + 369PF06032DUF917Protein of unknown function (DUF917)2.10E-127
WP_010277184.1 250026 251595 + 522PF05378
PF01968
PF13941
PF06406
Hydant_A_N
Hydantoinase_A
MutL
StbA
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
1.20E-34
4.80E-32
2.20E-07
1.90E-04
WP_010277183.1 252424 251683 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-30
8.50E-19
3.80E-06
WP_010277181.1 254976 252693 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.20E-207
1.50E-43
WP_207189336.1 255852 255033 - 272PF01226Form_Nir_transFormate/nitrite transporter2.30E-73
WP_010277176.1 258096 256332 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.50E-83
3.40E-66
WP_010277174.1 258425 259511 + 361PF00266Aminotran_5Aminotransferase class-V9.70E-62
WP_010277172.1 259592 260882 + 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.10E-151
WP_010277170.1 261104 261782 + 225PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.10E-81
1.20E-07
6.70E-06
6.80E-05
WP_010277167.1 261898 263572 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-95
1.60E-12
3.10E-06
WP_005967571.1 263661 263946 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.80E-29
8.40E-07
9.80E-04
WP_052051611.1 264676 264112 - 187PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
4.70E-31
3.70E-15
WP_010277156.1 265515 264738 - 258PF00977
PF03060
PF01207
His_biosynth
NMO
Dus
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
1.20E-73
4.10E-05
1.80E-04
WP_005967577.1 266234 265496 - 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
1.40E-77
5.70E-08
1.50E-06
9.60E-06
2.30E-05

Results for WP_016691947.1 [Rhodococcus rhodochrous] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007301084.1 25227 25566 + 113INFERRED GENE---
WP_086557958.1 26836 28083 + 415INFERRED GENE---
WP_230792472.1 28633 30619 + 661PF01083CutinaseCutinase6.40E-15
WP_230792473.1 31202 31352 + 49PF17761DUF1016_NDUF1016 N-terminal domain7.60E-08
WP_159419477.1 31685 31862 + 58NO PFAM MATCH---
WP_174247173.1 33758 32069 - 562PF00005
PF00664
PF02463
ABC_tran
ABC_membrane
SMC_N
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
7.30E-29
2.20E-18
2.30E-05
WP_230792474.1 35401 33754 - 548PF00005
PF00664
PF13304
PF02463
PF13555
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
6.50E-28
1.60E-13
1.60E-13
4.40E-09
1.50E-06
WP_157788865.1 36344 35384 - 319NO PFAM MATCH---
WP_016691947.1 37908 36483 - 474PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.20E-40
WP_159419476.1 38909 37925 - 327PF02129
PF12146
Peptidase_S15
Hydrolase_4
X-Pro dipeptidyl-peptidase (S15 family)
Serine aminopeptidase, S33
4.60E-17
1.70E-08
WP_230792475.1 39757 38905 - 283NO PFAM MATCH---
WP_016691944.1 39934 39835 - 32NO PFAM MATCH---
WP_230792476.1 40049 41240 + 396NO PFAM MATCH---
WP_269073186.1 42191 42992 + 266PF00326Peptidase_S9Prolyl oligopeptidase family8.70E-26
WP_230792477.1 42988 44140 + 383PF01032FecCDFecCD transport family6.10E-92
WP_230792478.1 44136 44955 + 272PF00005
PF13304
PF02463
PF13555
PF13476
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA domain
7.60E-31
1.00E-09
1.80E-06
6.00E-05
5.40E-04
WP_051032973.1 44951 45998 + 348PF01497Peripla_BP_2Periplasmic binding protein6.90E-27

Results for WP_046648645.1 [Bacillus cereus group sp. Bc008] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_270773501.1 737 0 - 245PF01131
PF01751
Topoisom_bac
Toprim
DNA topoisomerase
Toprim domain
1.10E-14
1.90E-13
WP_046648651.1 3248 1895 - 450PF07282OrfB_Zn_ribbonPutative transposase DNA-binding domain7.80E-24
WP_046648649.1 3565 3994 + 142NO PFAM MATCH---
WP_071713415.1 4181 4391 + 69NO PFAM MATCH---
WP_225991071.1 5743 5278 - 154NO PFAM MATCH---
WP_046648648.1 7098 6069 - 342PF16169
PF14399
DUF4872
BtrH_N
Domain of unknown function (DUF4872)
Butirosin biosynthesis protein H, N-terminal
8.30E-24
2.00E-17
WP_046648680.1 8740 7075 - 554PF00664
PF00005
PF13304
PF02463
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.70E-21
2.00E-18
1.20E-05
3.20E-05
WP_046648647.1 9554 8729 - 274PF00881NitroreductaseNitroreductase family4.90E-11
WP_046648645.1 10873 9583 - 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-54
WP_046648643.1 11844 10884 - 319NO PFAM MATCH---
WP_162837638.1 12109 11938 - 56NO PFAM MATCH---
WP_046648641.1 12430 13096 + 221PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.50E-14
WP_000866032.1 14183 13544 - 212PF08378NERDNuclease-related domain2.20E-31
WP_071713414.1 14583 14199 - 127PF13571DUF4133Domain of unknown function (DUF4133)2.70E-04
WP_270773502.1 14708 15296 + 195NO PFAM MATCH---
WP_016096753.1 15279 15801 + 174INFERRED GENE---
WP_000973297.1 16003 17125 + 373PF01385
PF07282
PF12323
OrfB_IS605
OrfB_Zn_ribbon
HTH_OrfB_IS605
Probable transposase
Putative transposase DNA-binding domain
Helix-turn-helix domain
3.90E-26
1.80E-25
1.80E-20

Results for WP_046648645.1 [Bacillus cereus group sp. Bc008] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_270773501.1 737 0 - 245PF01131
PF01751
Topoisom_bac
Toprim
DNA topoisomerase
Toprim domain
1.10E-14
1.90E-13
WP_046648651.1 3248 1895 - 450PF07282OrfB_Zn_ribbonPutative transposase DNA-binding domain7.80E-24
WP_046648649.1 3565 3994 + 142NO PFAM MATCH---
WP_071713415.1 4181 4391 + 69NO PFAM MATCH---
WP_225991071.1 5743 5278 - 154NO PFAM MATCH---
WP_046648648.1 7098 6069 - 342PF16169
PF14399
DUF4872
BtrH_N
Domain of unknown function (DUF4872)
Butirosin biosynthesis protein H, N-terminal
8.30E-24
2.00E-17
WP_046648680.1 8740 7075 - 554PF00664
PF00005
PF13304
PF02463
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.70E-21
2.00E-18
1.20E-05
3.20E-05
WP_046648647.1 9554 8729 - 274PF00881NitroreductaseNitroreductase family4.90E-11
WP_046648645.1 10873 9583 - 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-54
WP_046648643.1 11844 10884 - 319NO PFAM MATCH---
WP_162837638.1 12109 11938 - 56NO PFAM MATCH---
WP_046648641.1 12430 13096 + 221PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.50E-14
WP_000866032.1 14183 13544 - 212PF08378NERDNuclease-related domain2.20E-31
WP_071713414.1 14583 14199 - 127PF13571DUF4133Domain of unknown function (DUF4133)2.70E-04
WP_270773502.1 14708 15296 + 195NO PFAM MATCH---
WP_016096753.1 15279 15801 + 174INFERRED GENE---
WP_000973297.1 16003 17125 + 373PF01385
PF07282
PF12323
OrfB_IS605
OrfB_Zn_ribbon
HTH_OrfB_IS605
Probable transposase
Putative transposase DNA-binding domain
Helix-turn-helix domain
3.90E-26
1.80E-25
1.80E-20

Results for WP_000512735.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_078404255.1 153694 153493 - 66NO PFAM MATCH---
WP_162281172.1 154372 153727 - 214PF00565SNaseStaphylococcal nuclease homologue2.20E-25
WP_162281173.1 157464 154800 - 887PF01131
PF13342
PF01751
Topoisom_bac
Toprim_Crpt
Toprim
DNA topoisomerase
C-terminal repeat of topoisomerase
Toprim domain
2.00E-80
1.00E-49
1.10E-12
WP_006097157.1 157639 157729 + 30INFERRED GENE---
WP_000464479.1 158269 157810 - 152NO PFAM MATCH---
WP_000716183.1 159390 158373 - 338PF16169
PF14399
PF13529
DUF4872
BtrH_N
Peptidase_C39_2
Domain of unknown function (DUF4872)
Butirosin biosynthesis protein H, N-terminal
Peptidase_C39 like family
2.60E-26
1.60E-17
8.50E-04
WP_014893142.1 161030 159386 - 547PF00664
PF00005
PF13304
PF02463
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
5.90E-22
3.80E-19
7.00E-05
4.60E-04
WP_162281175.1 161847 161019 - 275PF00881NitroreductaseNitroreductase family7.80E-12
WP_000512735.1 163166 161876 - 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.80E-55
WP_162281176.1 164139 163179 - 319NO PFAM MATCH---
WP_000435813.1 164445 164277 - 55NO PFAM MATCH---
WP_162281177.1 166246 165607 - 212PF08378NERDNuclease-related domain1.50E-28
WP_002163370.1 166646 166262 - 127PF13571DUF4133Domain of unknown function (DUF4133)4.00E-04
WP_162281178.1 166771 167356 + 194NO PFAM MATCH---
WP_000377937.1 167339 167954 + 204NO PFAM MATCH---
WP_118414163.1 168640 168004 - 211NO PFAM MATCH---
WP_162281179.1 169269 168639 - 209NO PFAM MATCH---

Results for WP_026586230.1 [Bacillus sp. NSP9.1] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026586222.1 1371908 1372658 + 249PF02146SIR2Sir2 family2.50E-51
WP_026586223.1 1373111 1372925 - 61NO PFAM MATCH---
WP_026586224.1 1373620 1373110 - 169PF00583
PF13673
PF13508
PF13527
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_9
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
3.10E-14
2.50E-12
1.50E-10
2.20E-08
2.90E-08
WP_026586225.1 1374626 1373726 - 299PF01522
PF10096
Polysacc_deac_1
DUF2334
Polysaccharide deacetylase
Uncharacterized protein conserved in bacteria (DUF2334)
9.50E-30
4.50E-04
WP_026586226.1 1374902 1375754 + 283PF01063Aminotran_4Amino-transferase class IV9.60E-52
WP_026586227.1 1377156 1375794 - 453PF03553Na_H_antiporterNa+/H+ antiporter family2.40E-69
WP_026586228.1 1377387 1378368 + 326PF01263Aldose_epimAldose 1-epimerase4.50E-44
WP_026586229.1 1378845 1378380 - 154PF16302DUF4944Domain of unknown function (DUF4944)3.60E-43
WP_026586230.1 1380853 1378918 - 644PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-83
WP_026586231.1 1382700 1380852 - 615NO PFAM MATCH---
WP_236251213.1 1383008 1382750 - 85NO PFAM MATCH---
WP_026586232.1 1383859 1383358 - 166PF00582UspUniversal stress protein family1.60E-32
WP_026586233.1 1384394 1386149 + 584PF00664
PF00005
PF02463
ABC_membrane
ABC_tran
SMC_N
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
1.50E-43
3.20E-31
5.00E-05
WP_026586234.1 1386145 1388164 + 672PF00664
PF00005
PF02463
PF13191
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.70E-43
2.70E-32
6.10E-08
2.00E-04
WP_026586235.1 1388819 1388198 - 206PF13460
PF05368
PF01370
PF01118
PF03435
NAD_binding_10
NmrA
Epimerase
Semialdhyde_dh
Sacchrp_dh_NADP
NAD(P)H-binding
NmrA-like family
NAD dependent epimerase/dehydratase family
Semialdehyde dehydrogenase, NAD binding domain
Saccharopine dehydrogenase NADP binding domain
1.50E-32
2.70E-07
1.90E-05
2.60E-05
1.40E-04
WP_179115747.1 1388987 1388843 - 47NO PFAM MATCH---
WP_026586236.1 1389306 1389105 - 66PF00269SASPSmall, acid-soluble spore proteins, alpha/beta type4.10E-21

Results for WP_004319383.1 [Bacteroides caccae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004319406.1 179817 177693 - 707PF00005
PF00664
PF03412
PF02463
PF13304
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
ABC transporter
ABC transporter transmembrane region
Peptidase C39 family
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
5.90E-31
9.30E-29
1.80E-22
1.80E-08
1.80E-05
WP_004319400.1 181312 180646 - 221NO PFAM MATCH---
WP_004319396.1 182094 181482 - 203NO PFAM MATCH---
WP_004319394.1 184467 182178 - 762PF14905
PF13715
PF13620
OMP_b-brl_3
CarbopepD_reg_2
CarboxypepD_reg
Outer membrane protein beta-barrel family
CarboxypepD_reg-like domain
Carboxypeptidase regulatory-like domain
2.90E-48
6.80E-09
3.30E-06
WP_004319392.1 185964 184515 - 482PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.00E-16
1.60E-11
2.50E-10
WP_004319390.1 186437 185981 - 151NO PFAM MATCH---
WP_044917720.1 188629 186439 - 729PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
3.30E-36
8.00E-32
5.20E-25
4.40E-07
5.00E-06
WP_004319385.1 188910 188736 - 57NO PFAM MATCH---
WP_004319383.1 190837 188977 - 619PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-49
WP_004319381.1 192179 191978 - 66NO PFAM MATCH---
WP_004319379.1 193563 192300 - 420NO PFAM MATCH---
WP_004319377.1 196021 193837 - 727PF02534
PF10412
PF12696
PF14293
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
YWFCY
Type IV secretory system Conjugative DNA transfer
Type IV secretion-system coupling protein DNA-binding domain
TraM recognition site of TraD and TraG
YWFCY protein
2.00E-15
1.70E-13
4.90E-13
3.60E-08
WP_080599531.1 196684 196039 - 214PF07603DUF1566Protein of unknown function (DUF1566)8.40E-04
WP_004319373.1 197388 196866 - 173NO PFAM MATCH---
WP_004319371.1 198245 197399 - 281PF13595DUF4138Domain of unknown function (DUF4138)4.40E-56
WP_004319369.1 199627 198376 - 416PF12508Transposon_TraMConjugative transposon, TraM1.20E-56
WP_004319367.1 199946 199604 - 113NO PFAM MATCH---

Results for WP_006636650.1 [Bacillus sonorensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006636642.1 109410 109518 + 35PF17444YhdXUncharacterized YhdX-like1.30E-25
WP_006636643.1 109752 110832 + 359PF00924MS_channelMechanosensitive ion channel8.00E-59
WP_006636644.1 110865 111615 + 249PF02146SIR2Sir2 family9.90E-51
WP_006636645.1 112488 111990 - 165PF00583
PF13673
PF13508
PF13527
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_9
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
6.90E-13
9.90E-12
9.10E-10
1.60E-08
5.40E-07
WP_006636646.1 113523 112623 - 299PF01522Polysacc_deac_1Polysaccharide deacetylase6.50E-27
WP_006636647.1 113825 114677 + 283PF01063Aminotran_4Amino-transferase class IV1.30E-51
WP_006636648.1 116079 114717 - 453PF03553Na_H_antiporterNa+/H+ antiporter family1.30E-64
WP_006636649.1 116305 117286 + 326PF01263
PF14486
Aldose_epim
DUF4432
Aldose 1-epimerase
Domain of unknown function (DUF4432)
9.30E-43
2.30E-04
WP_006636650.1 119517 117582 - 644PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-89
WP_270568274.1 121385 119516 - 622NO PFAM MATCH---
WP_241748946.1 121686 121407 - 92NO PFAM MATCH---
WP_006636653.1 122939 122438 - 166PF00582UspUniversal stress protein family2.00E-33
WP_006636654.1 123484 125239 + 584PF00664
PF00005
PF02463
ABC_membrane
ABC_tran
SMC_N
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
1.20E-43
5.50E-29
8.10E-06
WP_006636655.1 125235 127257 + 673PF00664
PF00005
PF02463
PF13191
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
4.70E-43
3.00E-32
7.10E-09
1.60E-04
WP_029419048.1 127907 127286 - 206PF13460
PF05368
PF01370
NAD_binding_10
NmrA
Epimerase
NAD(P)H-binding
NmrA-like family
NAD dependent epimerase/dehydratase family
1.70E-29
1.50E-04
4.40E-04
WP_167373800.1 128075 127931 - 47NO PFAM MATCH---
WP_006636657.1 128395 128194 - 66PF00269SASPSmall, acid-soluble spore proteins, alpha/beta type7.60E-21

Results for WP_063895672.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_059879426.1 [Burkholderia stagnalis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_081069701.1 100763 100073 - 229PF00419FimbrialFimbrial protein9.20E-18
WP_059879439.1 103708 101119 - 862PF00577
PF13954
PF13953
Usher
PapC_N
PapC_C
Outer membrane usher protein
PapC N-terminal domain
PapC C-terminal domain
9.30E-169
1.50E-47
7.80E-20
WP_175038370.1 104596 103819 - 258PF00345
PF02753
PapD_N
PapD_C
Pili and flagellar-assembly chaperone, PapD N-terminal domain
Pili assembly chaperone PapD, C-terminal domain
1.30E-43
1.20E-16
WP_230942224.1 105194 104693 - 166PF16970
PF00419
FimA
Fimbrial
Type-1 fimbrial protein, A
Fimbrial protein
7.90E-22
3.90E-13
WP_150999112.1 105650 105944 + 97NO PFAM MATCH---
WP_230946789.1 106308 105972 - 111PF10086YhfCYhfC intramembrane metalloprotease6.90E-11
WP_059879432.1 106699 106375 - 107PF09458H_lectinH-type lectin domain2.30E-08
WP_059879429.1 107041 107602 + 186PF12306PixAInclusion body protein1.30E-30
WP_059879426.1 109933 107695 - 745PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-88
WP_059565833.1 110383 110020 - 120NO PFAM MATCH---
WP_059879423.1 110748 110403 - 114NO PFAM MATCH---
WP_230946788.1 115134 110781 - 1450PF00069
PF07714
PF13191
PF13401
PF06293
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
Kdo
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
Lipopolysaccharide kinase (Kdo/WaaP) family
7.60E-43
6.10E-26
5.00E-17
3.40E-06
2.00E-04
WP_059879421.1 116138 115130 - 335PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
8.40E-18
2.10E-09
WP_059879418.1 116704 117073 + 122PF12840
PF01022
PF12802
HTH_20
HTH_5
MarR_2
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
6.50E-15
9.90E-06
4.10E-04
WP_059879415.1 117044 117530 + 161PF08327AHSA1Activator of Hsp90 ATPase homolog 1-like protein5.90E-27
WP_059879597.1 117679 118318 + 212PF01323DSBADSBA-like thioredoxin domain6.60E-23
WP_059879412.1 119671 118687 - 327PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
7.30E-33
2.90E-21
2.60E-04

Results for WP_000192987.1 [Bacillus cereus group sp. BfR-BA-01347] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001128581.1 52377 53061 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)2.60E-75
WP_000424502.1 53909 53075 - 277PF11667DUF3267Putative zincin peptidase8.50E-04
WP_000650093.1 54105 54891 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.30E-06
7.80E-04
WP_000861667.1 54910 56146 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
1.10E-22
3.30E-06
WP_000332396.1 56615 56192 - 140PF13157EnasEndospore appendages9.60E-04
WP_001110237.1 56814 58149 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.30E-64
2.30E-20
3.20E-17
3.20E-15
3.00E-10
WP_000996782.1 58309 58720 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001175551.1 60292 58750 - 513PF00881NitroreductaseNitroreductase family7.20E-13
WP_000192987.1 62257 60307 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.90E-84
WP_001061558.1 64173 62253 - 639NO PFAM MATCH---
WP_000569894.1 65557 64297 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
4.10E-13
1.70E-04
WP_000197156.1 68558 65690 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.20E-36
WP_001178294.1 69385 69568 + 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_002181770.1 69700 70063 + 120NO PFAM MATCH---
WP_002158817.1 70079 70327 + 82INFERRED GENE---
WP_001169497.1 70485 71082 + 198PF12870DUF4878Domain of unknown function (DUF4878)2.30E-04
WP_000846650.1 71951 71486 - 154PF16723DUF5065Domain of unknown function (DUF5065)1.40E-04

Results for WP_000923699.1 [Bacillus pacificus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001200502.1 166109 167306 + 398PF07662
PF01773
Nucleos_tra2_C
Nucleos_tra2_N
Na+ dependent nucleoside transporter C-terminus
Na+ dependent nucleoside transporter N-terminus
3.30E-56
7.60E-18
WP_001233742.1 167479 168562 + 360PF01522
PF08481
Polysacc_deac_1
GBS_Bsp-like
Polysaccharide deacetylase
GBS Bsp-like repeat
3.70E-17
8.00E-05
WP_000007360.1 168678 169908 + 409PF02073Peptidase_M29Thermophilic metalloprotease (M29)2.00E-175
WP_000915099.1 169949 170134 + 61INFERRED GENE---
WP_003209857.1 170262 170886 + 208INFERRED GENE---
WP_000794852.1 172241 170975 - 421PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
4.30E-26
3.00E-22
WP_044790841.1 173567 172277 - 429PF19985DUF6421Family of unknown function (DUF6421)2.00E-05
WP_014481552.1 174559 173578 - 326NO PFAM MATCH---
WP_000923699.1 175937 174572 - 454PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-21
WP_000098406.1 176702 175937 - 254PF00881NitroreductaseNitroreductase family6.50E-17
WP_000243160.1 177777 176682 - 364PF00881NitroreductaseNitroreductase family7.50E-06
WP_000695082.1 178876 177790 - 361PF00881NitroreductaseNitroreductase family1.10E-07
WP_014481551.1 180252 178872 - 459PF13483
PF12706
PF00753
Lactamase_B_3
Lactamase_B_2
Lactamase_B
Beta-lactamase superfamily domain
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
2.40E-14
1.30E-12
3.10E-04
WP_014481550.1 180482 180344 - 45NO PFAM MATCH---

Results for WP_000192976.1 [Bacillus paranthracis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001195381.1 3282866 3282596 - 89NO PFAM MATCH---
WP_001036558.1 3283244 3282884 - 119NO PFAM MATCH---
WP_001178301.1 3283561 3283378 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109888.1 3283967 3283589 - 125NO PFAM MATCH---
WP_000428510.1 3284179 3283969 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_000197170.1 3285004 3287872 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.10E-55
6.30E-37
WP_000569909.1 3288005 3289262 + 418PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
3.70E-13
1.60E-04
WP_000067626.1 3289386 3291306 + 639NO PFAM MATCH---
WP_000192976.1 3291302 3293252 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.20E-84
WP_001175510.1 3293267 3294809 + 513PF00881NitroreductaseNitroreductase family6.40E-13
WP_000025735.1 3294901 3295492 + 196PF13649
PF08241
PF13847
PF01209
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Ubie_methyltran
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
3.30E-17
1.00E-16
1.60E-15
1.20E-11
3.60E-11
WP_000996798.1 3295932 3295521 - 136PF13048DUF3908Protein of unknown function (DUF3908)6.40E-53
WP_000470983.1 3296078 3296219 + 47INFERRED GENE---
WP_001110209.1 3297571 3296236 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.80E-64
2.30E-20
2.20E-17
2.30E-15
2.60E-10
WP_000332405.1 3297768 3298200 + 143NO PFAM MATCH---
WP_000650073.1 3299128 3298342 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
4.20E-06
8.70E-06
6.20E-04
WP_000424507.1 3299478 3300312 + 277NO PFAM MATCH---

Results for WP_060852291.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001128618.1 1210933 1211617 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.50E-75
WP_098212796.1 1212465 1211631 - 277PF11667DUF3267Putative zincin peptidase8.10E-04
WP_098212795.1 1212661 1213447 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
6.70E-07
7.20E-06
3.90E-04
WP_098212794.1 1213466 1214702 + 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
3.10E-22
1.40E-06
2.20E-04
WP_000332414.1 1215169 1214740 - 142NO PFAM MATCH---
WP_098212793.1 1215368 1216703 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.50E-63
3.70E-20
9.20E-17
1.80E-15
4.00E-10
WP_000996782.1 1216863 1217274 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_098212792.1 1218846 1217304 - 513PF00881NitroreductaseNitroreductase family2.70E-11
WP_060852291.1 1220812 1218862 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-84
WP_060852290.1 1222728 1220808 - 639NO PFAM MATCH---
WP_000569900.1 1224112 1222852 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
4.00E-13
1.70E-04
WP_000197120.1 1227112 1224244 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.20E-36
WP_000428513.1 1227936 1228146 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.80E-10
1.10E-06
4.10E-05
6.90E-05
WP_098212791.1 1228148 1228526 + 125NO PFAM MATCH---
WP_001178303.1 1228554 1228737 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001036588.1 1228870 1229233 + 120NO PFAM MATCH---
WP_002126037.1 1229249 1229498 + 83INFERRED GENE---

Results for WP_009434935.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000705765.1 70273 68008 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.10E-51
3.70E-19
3.60E-04
WP_000167336.1 70764 70479 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 72597 70923 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000125016.1 73391 72707 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_001295345.1 74328 73563 - 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000445231.1 75780 74496 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_000057127.1 76939 75850 - 362PF00266Aminotran_5Aminotransferase class-V2.90E-75
WP_000642849.1 77830 77137 - 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_009434935.1 77959 79720 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-83
6.30E-67
WP_001140910.1 80167 80983 + 271PF01226Form_Nir_transFormate/nitrite transporter9.10E-75
WP_001292822.1 81037 83320 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
4.70E-209
1.60E-43
WP_000111043.1 83511 84252 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001190375.1 84924 84333 - 196PF02525
PF03358
Flavodoxin_2
FMN_red
Flavodoxin-like fold
NADPH-dependent FMN reductase
3.20E-39
2.30E-12
WP_001242678.1 85023 85932 + 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.90E-32
1.20E-19
WP_000918501.1 87363 85932 - 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
9.40E-28
9.20E-13
WP_000109289.1 88721 87572 - 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
3.70E-27
4.60E-10
1.00E-06
WP_000165880.1 89035 89662 + 208PF00857IsochorismataseIsochorismatase family7.10E-22

Results for WP_000192965.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_006345019.1 [Streptomyces tsukubensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006345028.1 911588 913157 + 522PF00561
PF08386
Abhydrolase_1
Abhydrolase_4
alpha/beta hydrolase fold
TAP-like protein
7.90E-27
3.80E-22
WP_006345027.1 914466 913212 - 417PF00400
PF11715
WD40
Nup160
WD domain, G-beta repeat
Nucleoporin Nup120/160
8.20E-17
3.60E-10
WP_233168974.1 915943 914578 - 454PF01345
PF01436
PF10282
PF08450
PF02239
DUF11
NHL
Lactonase
SGL
Cytochrom_D1
Domain of unknown function DUF11
NHL repeat
Lactonase, 7-bladed beta-propeller
SMP-30/Gluconolactonase/LRE-like region
Cytochrome D1 heme domain
2.70E-12
2.90E-11
1.30E-09
6.00E-09
1.30E-08
WP_006345025.1 916436 917531 + 364PF00296Bac_luciferaseLuciferase-like monooxygenase5.60E-57
WP_006345024.1 918153 917571 - 193PF02031
PF13583
PF00413
Peptidase_M7
Reprolysin_4
Peptidase_M10
Streptomyces extracellular neutral proteinase (M7) family
Metallo-peptidase family M12B Reprolysin-like
Matrixin
7.30E-29
5.70E-04
6.40E-04
WP_130584798.1 919324 918316 - 335PF01965
PF12833
PF00165
DJ-1_PfpI
HTH_18
HTH_AraC
DJ-1/PfpI family
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.30E-23
1.10E-21
2.90E-12
WP_006345021.1 919506 920145 + 212PF01966HDHD domain3.60E-08
WP_006345020.1 921235 920218 - 338NO PFAM MATCH---
WP_006345019.1 922493 921227 - 421PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.50E-44
WP_006345018.1 922869 923826 + 318PF12852
PF12833
PF00165
Cupin_6
HTH_18
HTH_AraC
Cupin
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.00E-35
2.50E-21
9.80E-17
WP_006345017.1 923909 924563 + 217PF00072
PF00196
PF08281
Response_reg
GerE
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
3.20E-16
7.80E-13
2.40E-05
WP_006345016.1 924912 924540 - 123PF00072Response_regResponse regulator receiver domain3.10E-17
WP_006345015.1 926698 924991 - 568PF01590
PF13185
PF07730
PF13492
PF13581
GAF
GAF_2
HisKA_3
GAF_3
HATPase_c_2
GAF domain
GAF domain
Histidine kinase
GAF domain
Histidine kinase-like ATPase domain
7.90E-22
8.50E-19
8.10E-14
1.40E-07
9.60E-05
WP_006345014.1 927180 927747 + 188PF03358
PF02525
FMN_red
Flavodoxin_2
NADPH-dependent FMN reductase
Flavodoxin-like fold
3.80E-24
8.50E-09
WP_006345013.1 927743 928709 + 321PF03704BTADBacterial transcriptional activator domain2.80E-31
WP_130584800.1 928705 931609 + 967PF03704
PF13191
PF13604
PF13401
BTAD
AAA_16
AAA_30
AAA_22
Bacterial transcriptional activator domain
AAA ATPase domain
AAA domain
AAA domain
6.70E-41
8.40E-12
5.60E-05
8.20E-04
WP_240205010.1 933375 931689 - 561PF07993
PF01370
PF04321
PF00550
PF01073
NAD_binding_4
Epimerase
RmlD_sub_bind
PP-binding
3Beta_HSD
Male sterility protein
NAD dependent epimerase/dehydratase family
RmlD substrate binding domain
Phosphopantetheine attachment site
3-beta hydroxysteroid dehydrogenase/isomerase family
8.70E-62
5.10E-17
3.30E-10
9.30E-10
5.80E-08

Results for WP_006347379.1 [Streptomyces tsukubensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006347371.1 3667586 3667130 - 151PF01037
PF13404
PF13412
PF12802
PF12840
AsnC_trans_reg
HTH_AsnC-type
HTH_24
MarR_2
HTH_20
Lrp/AsnC ligand binding domain
AsnC-type helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Helix-turn-helix domain
4.90E-19
4.00E-17
3.00E-14
7.90E-07
3.60E-05
WP_040914965.1 3668447 3667739 - 235PF02441FlavoproteinFlavoprotein7.40E-16
WP_040914966.1 3669096 3668535 - 186PF05685Uma2Putative restriction endonuclease1.30E-21
WP_006347374.1 3670069 3669139 - 309PF01040UbiAUbiA prenyltransferase family8.30E-49
WP_006347375.1 3671511 3670065 - 481PF01977UbiD3-octaprenyl-4-hydroxybenzoate carboxy-lyase5.20E-160
WP_006347376.1 3671599 3671968 + 122PF13396PLDc_NPhospholipase_D-nuclease N-terminal1.40E-11
WP_233168880.1 3672978 3671973 - 334PF07479
PF01210
PF20618
PF02558
PF03807
NAD_Gly3P_dh_C
NAD_Gly3P_dh_N
GPD_NAD_C_bact
ApbA
F420_oxidored
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Bacterial GPD, NAD-dependent C-terminal
Ketopantoate reductase PanE/ApbA
NADP oxidoreductase coenzyme F420-dependent
3.50E-53
2.60E-48
8.10E-23
2.40E-10
1.90E-08
WP_045852909.1 3673823 3673013 - 269PF08241
PF13649
PF13489
PF13847
PF08242
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.80E-17
3.00E-15
1.70E-14
1.10E-12
2.70E-09
WP_006347379.1 3674964 3673815 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-51
WP_006347380.1 3676145 3674960 - 394PF07812TfuATfuA-like protein1.40E-41
WP_006347381.1 3676595 3676409 - 61PF04149DUF397Domain of unknown function (DUF397)3.10E-22
WP_078902188.1 3677485 3676591 - 297PF19054
PF13560
PF01381
DUF5753
HTH_31
HTH_3
Domain of unknown function (DUF5753)
Helix-turn-helix domain
Helix-turn-helix
5.30E-44
5.10E-10
1.60E-05
WP_006347383.1 3678738 3677652 - 361PF01578Cytochrom_C_asmCytochrome C assembly protein3.60E-44
WP_006347384.1 3680570 3678734 - 611PF05140ResBResB-like family3.50E-129
WP_040914981.1 3681346 3680575 - 256PF02683
PF13386
DsbD
DsbD_2
Cytochrome C biogenesis protein transmembrane region
Cytochrome C biogenesis protein transmembrane region
1.20E-49
8.00E-08
WP_006347386.1 3681959 3681359 - 199PF00578
PF08534
PF13905
PF00085
AhpC-TSA
Redoxin
Thioredoxin_8
Thioredoxin
AhpC/TSA family
Redoxin
Thioredoxin-like
Thioredoxin
2.30E-21
5.70E-21
1.20E-09
9.90E-07
WP_040914983.1 3683336 3682046 - 429NO PFAM MATCH---

Results for WP_006350677.1 [Streptomyces tsukubensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006350667.1 7540088 7538834 - 417NO PFAM MATCH---
WP_040916946.1 7540241 7541222 + 326PF01497Peripla_BP_2Periplasmic binding protein8.80E-19
WP_130585255.1 7541218 7542265 + 348PF01032FecCDFecCD transport family1.40E-67
WP_006350671.1 7542261 7543272 + 336PF01032FecCDFecCD transport family2.20E-63
WP_015613002.1 7543268 7544196 + 309INFERRED GENE---
WP_006350673.1 7544252 7544393 + 46NO PFAM MATCH---
WP_130585254.1 7544780 7545833 + 350NO PFAM MATCH---
WP_130585253.1 7545829 7547374 + 514PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
1.70E-34
4.20E-22
WP_006350677.1 7547370 7548753 + 460PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-42
WP_130585252.1 7548854 7550138 + 427NO PFAM MATCH---
WP_130585251.1 7550134 7551886 + 583PF00005
PF00664
PF13191
PF02463
ABC_tran
ABC_membrane
AAA_16
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
1.50E-31
1.00E-07
2.60E-05
1.60E-04
WP_130585250.1 7551882 7553607 + 574PF00005
PF00664
ABC_tran
ABC_membrane
ABC transporter
ABC transporter transmembrane region
3.40E-24
1.30E-08
WP_006350681.1 7554141 7553661 - 159PF00582UspUniversal stress protein family2.30E-08
WP_006350682.1 7555415 7554149 - 421PF02040
PF03600
ArsB
CitMHS
Arsenical pump membrane protein
Citrate transporter
6.10E-22
3.40E-15
WP_006350683.1 7555599 7556166 + 188PF14124DUF4291Domain of unknown function (DUF4291)1.20E-60
WP_233168746.1 7559893 7556248 - 1214PF00082
PF13620
PF11721
PF13715
PF17210
Peptidase_S8
CarboxypepD_reg
Malectin
CarbopepD_reg_2
SdrD_B
Subtilase family
Carboxypeptidase regulatory-like domain
Malectin domain
CarboxypepD_reg-like domain
SdrD B-like domain
4.80E-43
1.00E-30
3.90E-25
2.00E-23
3.20E-07
WP_006350685.1 7561114 7560175 - 312PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.20E-17
1.20E-06

Results for WP_041380020.1 [Photorhabdus laumondii subsp. laumondii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011145915.1 4721 4436 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.90E-29
8.00E-08
WP_011145914.1 6460 4786 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.90E-98
3.00E-10
2.20E-06
WP_011145913.1 7325 6641 - 227PF02224
PF13189
PF13671
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_33
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
4.60E-80
4.40E-07
1.40E-06
6.50E-05
1.70E-04
WP_058588494.1 8916 7629 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.20E-148
WP_058588493.1 10254 9165 - 362PF00266Aminotran_5Aminotransferase class-V4.50E-65
WP_201742986.1 10916 10424 - 163PF13673
PF13508
PF00583
PF08445
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
FR47-like protein
1.50E-11
2.30E-11
1.30E-10
2.00E-06
WP_011145909.1 11200 10924 - 91PF08681
PF05534
DUF1778
HicB
Protein of unknown function (DUF1778)
HicB family
1.40E-28
5.70E-04
WP_011145908.1 12413 11369 - 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
2.10E-57
2.00E-24
WP_041380020.1 12551 14315 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.70E-81
4.50E-67
WP_011145906.1 14634 15492 + 285PF01226Form_Nir_transFormate/nitrite transporter2.60E-73
WP_109791437.1 15547 17830 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.60E-207
4.60E-42
WP_011145904.1 17903 18644 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.80E-30
5.80E-18
1.20E-05
WP_010848831.1 19060 19297 + 79INFERRED GENE---
WP_011147950.1 19426 19638 + 70INFERRED GENE---

Results for WP_017454449.1 [Herbaspirillum rubrisubalbicans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017452630.1 3185084 3186431 + 448PF05936T6SS_VasEBacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE7.60E-139
WP_017452631.1 3186427 3187207 + 259PF09850DotUType VI secretion system protein DotU5.60E-57
WP_253548326.1 3187349 3190103 + 917PF05954
PF10106
PF13296
PF04717
Phage_GPD
DUF2345
T6SS_Vgr
Phage_base_V
Phage tail baseplate hub (GPD)
Uncharacterized protein conserved in bacteria (DUF2345)
Putative type VI secretion system Rhs element Vgr
Type VI secretion system/phage-baseplate injector OB domain
6.60E-71
1.90E-47
4.30E-36
1.80E-11
WP_253548328.1 3190210 3191122 + 303NO PFAM MATCH---
WP_146744566.1 3191137 3192049 + 303NO PFAM MATCH---
WP_253548330.1 3192077 3193013 + 311NO PFAM MATCH---
WP_253548332.1 3193127 3194087 + 319NO PFAM MATCH---
WP_253548334.1 3194239 3195070 + 276NO PFAM MATCH---
WP_017454449.1 3197286 3195075 - 736PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.40E-74
8.60E-73
1.20E-08
WP_017453791.1 3198162 3197673 - 162PF04386SspBStringent starvation protein B2.90E-39
WP_017453790.1 3198894 3198282 - 203PF13417
PF02798
PF13409
PF00043
PF13410
GST_N_3
GST_N
GST_N_2
GST_C
GST_C_2
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
2.10E-17
1.00E-16
2.40E-15
2.00E-08
1.40E-06
WP_006461590.1 3198992 3199758 + 255INFERRED GENE---
WP_253548336.1 3201188 3199781 - 468PF00033
PF13631
PF00032
Cytochrome_B
Cytochrom_B_N_2
Cytochrom_B_C
Cytochrome b/b6/petB
Cytochrome b(N-terminal)/b6/petB
Cytochrome b(C-terminal)/b6/petD
1.20E-64
2.00E-43
1.30E-36
WP_017453787.1 3201799 3201190 - 202PF00355RieskeRieske [2Fe-2S] domain3.80E-12
WP_171427140.1 3202097 3202529 + 143PF01741MscLLarge-conductance mechanosensitive channel, MscL2.00E-42
WP_171940787.1 3203365 3202600 - 254PF01784NIF3NIF3 (NGG1p interacting factor 3)1.00E-52
WP_253548338.1 3203407 3204589 + 393PF13365
PF00089
PF13180
PF17820
PF02163
Trypsin_2
Trypsin
PDZ_2
PDZ_6
Peptidase_M50
Trypsin-like peptidase domain
Trypsin
PDZ domain
PDZ domain
Peptidase family M50
6.20E-33
3.30E-17
3.50E-16
3.40E-11
1.40E-10

Results for WP_016350518.1 [Aeromonas hydrophila] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_118881361.1 6113 5018 - 364PF00005
PF08402
PF13304
PF09818
PF02463
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
ABC transporter
TOBE domain
AAA domain, putative AbiEii toxin, Type IV TA system
ATPase of the ABC class
RecF/RecN/SMC N terminal domain
2.70E-33
8.30E-09
4.90E-08
6.30E-06
5.30E-05
WP_118881360.1 7402 6382 - 339PF13343
PF13416
PF01547
PF13531
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.50E-29
1.00E-19
1.80E-15
6.90E-14
WP_026141379.1 8230 7522 - 235PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.50E-34
1.60E-19
WP_118881358.1 8471 9614 + 380PF00266Aminotran_5Aminotransferase class-V1.30E-22
WP_118881357.1 9610 11050 + 479PF00202Aminotran_3Aminotransferase class-III4.80E-78
WP_118881356.1 11042 11882 + 279PF12710HADhaloacid dehalogenase-like hydrolase7.80E-04
WP_196481571.1 14293 12004 - 762PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.60E-201
4.70E-43
WP_011705812.1 15181 14332 - 282PF01226Form_Nir_transFormate/nitrite transporter1.50E-73
WP_016350518.1 17322 15561 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-78
3.50E-65
WP_011705814.1 17764 17449 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.50E-29
WP_077096509.1 18103 19219 + 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.40E-58
5.30E-23
WP_118881355.1 19835 22613 + 925PF05193
PF00675
Peptidase_M16_C
Peptidase_M16
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
5.50E-36
1.10E-25
WP_101615215.1 23870 22706 - 387PF01053
PF00155
PF03841
PF00266
Cys_Met_Meta_PP
Aminotran_1_2
SelA
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
L-seryl-tRNA selenium transferase
Aminotransferase class-V
2.50E-134
2.50E-06
7.50E-05
1.20E-04
WP_118881354.1 25048 23977 - 356PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
1.70E-33
6.70E-19
WP_019838689.1 26146 25507 - 212PF13460
PF05368
PF03435
PF01370
PF01073
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
3Beta_HSD
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
8.30E-27
2.30E-09
2.80E-07
8.50E-07
3.20E-04
WP_011705820.1 26247 27153 + 301PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
3.00E-40
3.50E-22
3.40E-04
WP_011705821.1 28008 27267 - 246PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
5.60E-57
5.20E-55
1.40E-18
6.30E-08
9.50E-05

Results for WP_064569041.1 [Kosakonia sp. MUSA4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_208658084.1 1694606 1698395 + 1262PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
5.20E-74
3.30E-41
1.70E-28
3.80E-28
4.80E-05
WP_208658085.1 1698514 1699126 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.20E-58
2.30E-05
WP_208658086.1 1699135 1700479 + 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
3.40E-65
9.70E-23
4.20E-18
4.00E-15
1.40E-07
WP_043954052.1 1700574 1701867 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.20E-37
3.40E-33
WP_208658087.1 1702231 1703380 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.00E-32
1.70E-08
7.40E-06
3.80E-05
WP_007374133.1 1704197 1703456 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.20E-31
5.10E-18
5.40E-06
WP_208658088.1 1706672 1704389 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-206
1.70E-43
WP_208658089.1 1707581 1706723 - 285PF01226Form_Nir_transFormate/nitrite transporter8.00E-75
WP_064569041.1 1709747 1707986 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.30E-83
1.20E-66
WP_208658090.1 1709885 1710578 + 230PF04239DUF421Protein of unknown function (DUF421)5.50E-16
WP_208658091.1 1710740 1711829 + 362PF00266Aminotran_5Aminotransferase class-V1.30E-68
WP_208658092.1 1711897 1713181 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-149
WP_074775612.1 1713348 1714032 + 227PF02224
PF13189
PF13207
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.20E-84
2.30E-07
5.30E-04
6.30E-04
8.00E-04
WP_208658093.1 1714145 1715819 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.90E-98
8.40E-12
2.70E-06
WP_007374142.1 1716001 1716286 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.00E-29
5.70E-08
9.30E-05
WP_208657065.1 1716601 1716289 - 103NO PFAM MATCH---
WP_208658094.1 1716500 1718762 + 753PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
1.50E-53
3.10E-17
1.10E-06
2.40E-04

Results for WP_033180063.1 [Rhizobium leguminosarum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_033180067.1 98668 97366 - 433PF14524
PF00005
PF13304
Wzt_C
ABC_tran
AAA_21
Wzt C-terminal domain
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
6.00E-20
1.10E-19
1.70E-04
WP_003561833.1 99513 98664 - 282PF01061ABC2_membraneABC-2 type transporter2.90E-18
WP_180691341.1 99628 102679 + 1016PF00535
PF01522
PF05401
PF13641
PF10111
Glycos_transf_2
Polysacc_deac_1
NodS
Glyco_tranf_2_3
Glyco_tranf_2_2
Glycosyl transferase family 2
Polysaccharide deacetylase
Nodulation protein S (NodS)
Glycosyltransferase like family 2
Glycosyltransferase like family 2
6.80E-33
9.70E-24
5.30E-19
9.50E-19
9.50E-15
WP_130755978.1 103717 102667 - 349PF00535
PF10111
PF13641
PF13506
PF13704
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_tranf_2_4
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 21
Glycosyl transferase family 2
3.50E-34
2.20E-31
5.50E-19
3.90E-07
3.10E-05
WP_003551129.1 103930 104175 + 81INFERRED GENE---
WP_003542083.1 105382 105589 + 68NO PFAM MATCH---
WP_017994913.1 106244 105995 - 82NO PFAM MATCH---
WP_033180064.1 107054 106346 - 235PF07812TfuATfuA-like protein4.60E-43
WP_033180063.1 108259 107050 - 402PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.40E-62
WP_033180062.1 108514 108301 - 70NO PFAM MATCH---
WP_210274404.1 110373 108534 - 612PF14559TPR_19Tetratricopeptide repeat8.10E-04
WP_033180060.1 110817 110391 - 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
2.20E-12
4.30E-08
4.50E-07
7.20E-05
WP_033180059.1 111682 110989 - 230PF13489
PF08241
PF13649
PF08242
PF13847
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
7.30E-22
4.20E-16
4.30E-14
6.10E-12
8.90E-11
WP_033180058.1 112143 113034 + 296PF19495DUF6030Family of unknown function (DUF6030)2.10E-60
WP_033180057.1 113500 113059 - 146NO PFAM MATCH---
WP_033180056.1 113639 114713 + 357PF00331Glyco_hydro_10Glycosyl hydrolase family 102.30E-68
WP_003561850.1 114744 115896 + 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
2.00E-28
8.20E-25
8.30E-13
6.70E-09
2.50E-06

Results for WP_033183847.1 [Rhizobium leguminosarum bv. trifolii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_033183853.1 458098 455518 - 859PF00656
PF08238
Peptidase_C14
Sel1
Caspase domain
Sel1 repeat
9.30E-31
1.50E-24
WP_033183852.1 459620 458342 - 425PF13378
PF02746
PF07476
MR_MLE_C
MR_MLE_N
MAAL_C
Enolase C-terminal domain-like
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Methylaspartate ammonia-lyase C-terminus
7.80E-58
2.80E-06
4.60E-04
WP_003553379.1 460447 459712 - 244PF13561
PF00106
PF01370
PF00107
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
1.60E-55
6.10E-43
9.90E-06
3.00E-05
WP_033183851.1 460921 461707 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
5.10E-13
2.80E-11
4.10E-08
1.80E-06
5.40E-05
WP_033183850.1 461786 462623 + 278PF04909Amidohydro_2Amidohydrolase4.80E-42
WP_003553384.1 462825 463230 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.60E-07
3.20E-06
WP_033183849.1 463577 463310 - 88NO PFAM MATCH---
WP_033183848.1 464387 463643 - 247PF07812TfuATfuA-like protein2.60E-39
WP_033183847.1 465646 464383 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.10E-65
WP_003553391.1 465803 465659 - 47NO PFAM MATCH---
WP_050516856.1 467856 465909 - 648PF03704
PF07719
PF14559
PF00515
PF13428
BTAD
TPR_2
TPR_19
TPR_1
TPR_14
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
7.20E-15
5.60E-12
3.60E-10
2.20E-09
3.30E-09
WP_050516859.1 468303 468066 - 78NO PFAM MATCH---
WP_033183845.1 469842 468489 - 450PF07969
PF01979
Amidohydro_3
Amidohydro_1
Amidohydrolase family
Amidohydrolase family
7.30E-42
4.00E-05
WP_082229847.1 470846 469874 - 323PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.50E-35
1.20E-16
WP_033183843.1 471844 470848 - 331PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
2.80E-22
3.20E-19
WP_033183842.1 472725 471930 - 264PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.50E-21
WP_033183841.1 473503 472729 - 257PF00005
PF13304
PF13191
PF13555
ABC_tran
AAA_21
AAA_16
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
P-loop containing region of AAA domain
4.20E-33
7.40E-09
1.50E-04
3.40E-04

Results for WP_064980750.1 back to top

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Couldn't process WP_064980750.1 Genbank filestream. May be corrupt.

Results for WP_027031707.1 back to top

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Couldn't process WP_027031707.1 Genbank filestream. May be corrupt.

Results for WP_027033660.1 [Mesorhizobium loti R88b] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_171878182.1 6303973 6303016 - 318PF00561
PF12146
PF12697
PF00326
PF20434
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
Peptidase_S9
BD-FAE
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
Prolyl oligopeptidase family
BD-FAE
8.20E-27
2.20E-24
8.60E-18
2.80E-08
5.80E-05
WP_027033666.1 6304892 6304070 - 273PF00561
PF12146
PF12697
PF00326
PF20434
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
Peptidase_S9
BD-FAE
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
Prolyl oligopeptidase family
BD-FAE
1.40E-24
2.50E-23
1.60E-17
8.10E-09
4.90E-04
WP_051429781.1 6307521 6305817 - 567PF00211
PF00111
Guanylate_cyc
Fer2
Adenylate and Guanylate cyclase catalytic domain
2Fe-2S iron-sulfur cluster binding domain
1.00E-19
1.30E-09
WP_051429780.1 6309917 6307964 - 650PF13431
PF07719
PF00515
PF13181
PF14559
TPR_17
TPR_2
TPR_1
TPR_8
TPR_19
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.20E-23
1.70E-21
3.60E-21
7.40E-21
3.50E-17
WP_027033664.1 6310589 6311474 + 294PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.30E-23
1.40E-21
WP_027033663.1 6311570 6312452 + 293PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
3.90E-19
8.40E-16
WP_080680940.1 6312664 6313423 + 252PF12697
PF12695
PF12146
PF00561
Abhydrolase_6
Abhydrolase_5
Hydrolase_4
Abhydrolase_1
Alpha/beta hydrolase family
Alpha/beta hydrolase family
Serine aminopeptidase, S33
alpha/beta hydrolase fold
2.50E-21
1.20E-09
6.70E-08
2.30E-07
WP_027033661.1 6313476 6314160 + 227PF12697
PF12695
PF00561
PF12146
Abhydrolase_6
Abhydrolase_5
Abhydrolase_1
Hydrolase_4
Alpha/beta hydrolase family
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
2.10E-22
1.30E-05
1.40E-05
6.00E-05
WP_027033660.1 6315957 6314559 - 465PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-44
WP_027033659.1 6316124 6318035 + 636PF13414TPR_11TPR repeat3.90E-04
WP_027033658.1 6318468 6318066 - 133NO PFAM MATCH---
WP_167334897.1 6320316 6318522 - 597PF03098An_peroxidaseAnimal haem peroxidase2.80E-09
WP_245268898.1 6321202 6320326 - 291PF00892EamAEamA-like transporter family6.10E-33
WP_080680938.1 6322046 6321347 - 232PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
4.50E-31
1.00E-12
WP_080681084.1 6322854 6322083 - 256NO PFAM MATCH---
WP_027033655.1 6323317 6323713 + 131NO PFAM MATCH---
WP_012590325.1 6324331 6324963 + 210INFERRED GENE---

Results for WP_075606403.1 [Glaesserella parasuis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_035522561.1 813697 814369 + 223PF14622
PF00636
PF00035
Ribonucleas_3_3
Ribonuclease_3
dsrm
Ribonuclease-III-like
Ribonuclease III domain
Double-stranded RNA binding motif
1.70E-34
8.50E-23
9.30E-15
WP_021111569.1 814428 815331 + 300PF01926
PF07650
PF02421
PF00009
PF04548
MMR_HSR1
KH_2
FeoB_N
GTP_EFTU
AIG1
50S ribosome-binding GTPase
KH domain
Ferrous iron transport protein B
Elongation factor Tu GTP binding domain
AIG1 family
4.80E-24
8.50E-20
1.40E-14
4.80E-09
1.30E-08
WP_021111570.1 815330 816050 + 239PF11967
PF02565
RecO_N
RecO_C
Recombination protein O N terminal
Recombination protein O C terminal
5.70E-25
1.20E-20
WP_021111571.1 817144 816070 - 357PF00561Abhydrolase_1alpha/beta hydrolase fold5.80E-45
WP_075606404.1 818875 817330 - 514PF00884SulfataseSulfatase3.20E-26
WP_021111573.1 819015 819729 + 237PF00696AA_kinaseAmino acid kinase family1.10E-27
WP_005711228.1 820369 819790 - 192PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
2.70E-29
1.30E-09
WP_021111574.1 820498 821056 + 185PF01765RRFRibosome recycling factor8.60E-64
WP_075606403.1 821200 822946 + 581PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.50E-77
9.10E-63
WP_021111576.1 824453 823139 - 437PF00860Xan_ur_permeasePermease family1.80E-85
WP_021111577.1 825659 824618 - 346PF01594AI-2E_transportAI-2E family transporter6.20E-64
WP_075606402.1 826721 825731 - 329PF02774Semialdhyde_dhCSemialdehyde dehydrogenase, dimerisation domain8.50E-11
WP_075606401.1 827331 826863 - 155PF04186FxsAFxsA cytoplasmic membrane protein2.10E-29
WP_075621189.1 827724 829383 + 552PF02776
PF02775
PF00205
PF01855
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
POR_N
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Thiamine pyrophosphate enzyme, central domain
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
5.50E-55
5.40E-46
5.10E-44
1.30E-05
WP_021111581.1 829394 829613 + 72PF13710
PF13291
ACT_5
ACT_4
ACT domain
ACT domain
5.10E-22
5.00E-06
WP_075606399.1 829680 830223 + 180NO PFAM MATCH---
WP_075621188.1 834664 830494 - 1389PF00082
PF03797
PF12951
Peptidase_S8
Autotransporter
PATR
Subtilase family
Autotransporter beta-domain
Passenger-associated-transport-repeat
2.70E-29
1.50E-27
4.10E-09

Results for WP_005100311.1 [Acinetobacter lwoffii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005100298.1 1906439 1907357 + 305PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.00E-36
6.00E-14
WP_005100301.1 1907858 1910024 + 721PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
9.50E-27
1.10E-10
WP_004646981.1 1910697 1910088 - 202PF01914MarCMarC family integral membrane protein9.60E-14
WP_005100304.1 1912762 1910725 - 678PF02028BCCTBCCT, betaine/carnitine/choline family transporter4.10E-176
WP_004731001.1 1913032 1913611 + 192PF13977
PF00440
TetR_C_6
TetR_N
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
3.90E-29
1.30E-11
WP_005100306.1 1913632 1915108 + 491PF00171AldedhAldehyde dehydrogenase family5.30E-174
WP_005100307.1 1915119 1916775 + 551PF00732
PF05199
PF05834
GMC_oxred_N
GMC_oxred_C
Lycopene_cycl
GMC oxidoreductase
GMC oxidoreductase
Lycopene cyclase protein
6.50E-95
1.30E-41
4.70E-04
WP_005100309.1 1916904 1917675 + 256NO PFAM MATCH---
WP_005100311.1 1918017 1920225 + 735PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
2.20E-75
1.40E-72
8.30E-09
WP_005100313.1 1922188 1920475 - 570PF05187
PF00890
PF01266
PF13450
PF01946
ETF_QO
FAD_binding_2
DAO
NAD_binding_8
Thi4
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
FAD binding domain
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
Thi4 family
2.80E-50
2.20E-07
3.60E-07
2.80E-06
5.80E-06
WP_005100316.1 1923252 1922415 - 278PF09339
PF01614
PF13412
HTH_IclR
IclR
HTH_24
IclR helix-turn-helix domain
Bacterial transcriptional regulator
Winged helix-turn-helix DNA-binding
6.00E-17
7.90E-12
1.40E-04
WP_005100320.1 1923755 1924910 + 384PF00441
PF02771
PF02770
PF08028
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.80E-48
1.40E-31
5.00E-29
1.20E-25
WP_004646973.1 1924941 1926141 + 399PF02771
PF00441
PF02770
PF08028
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA dehydrogenase, middle domain
Acyl-CoA dehydrogenase, C-terminal domain
3.60E-35
1.10E-27
1.40E-19
3.50E-04
WP_004646972.1 1926395 1927676 + 426PF07690
PF00083
PF03137
PF12832
MFS_1
Sugar_tr
OATP
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Organic Anion Transporter Polypeptide (OATP) family
MFS_1 like family
9.00E-59
3.90E-28
1.10E-05
1.70E-04
WP_005100322.1 1927716 1928388 + 223PF01144CoA_transCoenzyme A transferase5.40E-65
WP_005100324.1 1928387 1929047 + 219PF01144CoA_transCoenzyme A transferase2.50E-31
WP_174894405.1 1929253 1931833 + 859PF00563
PF00990
PF13426
PF00989
PF08447
EAL
GGDEF
PAS_9
PAS
PAS_3
EAL domain
Diguanylate cyclase, GGDEF domain
PAS domain
PAS fold
PAS fold
8.00E-73
1.60E-39
2.50E-31
3.80E-24
7.80E-18

Results for WP_065228481.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_065228478.1 3709076 3708242 - 277NO PFAM MATCH---
WP_065228479.1 3709272 3710058 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.00E-05
1.20E-04
WP_001099936.1 3710077 3711313 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
2.90E-22
1.30E-05
WP_000332398.1 3711781 3711352 - 142NO PFAM MATCH---
WP_001110233.1 3711981 3713316 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.50E-64
1.50E-20
8.70E-17
1.90E-15
2.70E-10
WP_000634324.1 3713416 3713905 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
4.30E-10
1.40E-05
3.60E-04
WP_000996808.1 3714202 3714613 + 136PF13048DUF3908Protein of unknown function (DUF3908)1.80E-51
WP_065228480.1 3716185 3714643 - 513PF00881NitroreductaseNitroreductase family9.40E-13
WP_065228481.1 3718150 3716200 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-84
WP_065228482.1 3720066 3718146 - 639NO PFAM MATCH---
WP_000569893.1 3721449 3720189 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.80E-81
3.40E-20
5.00E-13
1.70E-04
WP_000197136.1 3724450 3721582 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.10E-63
5.10E-55
1.30E-36
WP_001178294.1 3725278 3725461 + 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_001036576.1 3725593 3725956 + 120NO PFAM MATCH---
WP_001267321.1 3726307 3726853 + 181PF19681DUF6183Family of unknown function (DUF6183)2.10E-04
WP_001169482.1 3727011 3727608 + 198PF12870DUF4878Domain of unknown function (DUF4878)2.70E-04
WP_000846655.1 3728477 3728012 - 154PF20251
PF16723
Big_14
DUF5065
Bacterial Ig-like domain
Domain of unknown function (DUF5065)
1.90E-05
3.10E-04

Results for WP_004319383.1 [Bacteroides caccae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004319406.1 179817 177693 - 707PF00005
PF00664
PF03412
PF02463
PF13304
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
ABC transporter
ABC transporter transmembrane region
Peptidase C39 family
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
5.90E-31
9.30E-29
1.80E-22
1.80E-08
1.80E-05
WP_004319400.1 181312 180646 - 221NO PFAM MATCH---
WP_004319396.1 182094 181482 - 203NO PFAM MATCH---
WP_004319394.1 184467 182178 - 762PF14905
PF13715
PF13620
OMP_b-brl_3
CarbopepD_reg_2
CarboxypepD_reg
Outer membrane protein beta-barrel family
CarboxypepD_reg-like domain
Carboxypeptidase regulatory-like domain
2.90E-48
6.80E-09
3.30E-06
WP_004319392.1 185964 184515 - 482PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.00E-16
1.60E-11
2.50E-10
WP_004319390.1 186437 185981 - 151NO PFAM MATCH---
WP_044917720.1 188629 186439 - 729PF03412
PF00005
PF00664
PF02463
PF12385
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
Peptidase_C70
Peptidase C39 family
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
Papain-like cysteine protease AvrRpt2
3.30E-36
8.00E-32
5.20E-25
4.40E-07
5.00E-06
WP_004319385.1 188910 188736 - 57NO PFAM MATCH---
WP_004319383.1 190837 188977 - 619PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-49
WP_004319381.1 192179 191978 - 66NO PFAM MATCH---
WP_004319379.1 193563 192300 - 420NO PFAM MATCH---
WP_004319377.1 196021 193837 - 727PF02534
PF10412
PF12696
PF14293
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
YWFCY
Type IV secretory system Conjugative DNA transfer
Type IV secretion-system coupling protein DNA-binding domain
TraM recognition site of TraD and TraG
YWFCY protein
2.00E-15
1.70E-13
4.90E-13
3.60E-08
WP_080599531.1 196684 196039 - 214PF07603DUF1566Protein of unknown function (DUF1566)8.40E-04
WP_004319373.1 197388 196866 - 173NO PFAM MATCH---
WP_004319371.1 198245 197399 - 281PF13595DUF4138Domain of unknown function (DUF4138)4.40E-56
WP_004319369.1 199627 198376 - 416PF12508Transposon_TraMConjugative transposon, TraM1.20E-56
WP_004319367.1 199946 199604 - 113NO PFAM MATCH---

Results for WP_044177927.1 [Phytobacter massiliensis JC163] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_044177907.1 1741098 1738833 - 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
4.80E-53
2.40E-17
3.90E-05
4.30E-05
WP_007374142.1 1741592 1741307 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.00E-29
5.70E-08
9.30E-05
WP_044177911.1 1743483 1741809 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.50E-100
7.90E-12
2.80E-07
WP_044177914.1 1744280 1743596 - 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
3.00E-84
2.90E-07
5.40E-04
7.80E-04
WP_044177917.1 1745210 1744451 - 252PF01435Peptidase_M48Peptidase family M481.30E-27
WP_044177919.1 1746644 1745360 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.40E-150
WP_044177922.1 1747802 1746713 - 362PF00266Aminotran_5Aminotransferase class-V6.50E-69
WP_044177924.1 1748657 1747964 - 230PF04239DUF421Protein of unknown function (DUF421)6.20E-15
WP_044177927.1 1748795 1750556 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.60E-84
3.70E-66
WP_044177930.1 1750961 1751819 + 285PF01226Form_Nir_transFormate/nitrite transporter1.20E-74
WP_044177932.1 1751870 1754153 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.10E-207
4.20E-44
WP_044177935.1 1754348 1755089 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4.20E-32
1.40E-18
4.40E-06
WP_044177937.1 1755723 1756137 + 137NO PFAM MATCH---
WP_044177940.1 1756148 1756709 + 186PF04011LemALemA family1.90E-40
WP_044177943.1 1756689 1757076 + 128NO PFAM MATCH---
WP_044177947.1 1758311 1757162 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
1.10E-26
1.50E-09
2.30E-06
4.00E-04
WP_044177950.1 1759883 1758590 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.10E-36
1.30E-33

Results for WP_011788123.1 [Shewanella putrefaciens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_011919949.1 1591850 1590518 - 443PF13175
PF13304
PF00005
PF13476
PF13191
AAA_15
AAA_21
ABC_tran
AAA_23
AAA_16
AAA ATPase domain
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter
AAA domain
AAA ATPase domain
2.90E-18
1.00E-14
1.40E-06
7.80E-06
3.20E-05
WP_011919948.1 1592332 1591927 - 134NO PFAM MATCH---
WP_115017158.1 1592792 1592705 - 28PF11730DUF3297Protein of unknown function (DUF3297)2.30E-04
WP_011919947.1 1593333 1592802 - 176PF14568
PF09346
SUKH_6
SMI1_KNR4
SMI1-KNR4 cell-wall
SMI1 / KNR4 family (SUKH-1)
8.20E-06
2.70E-05
WP_006080205.1 1593971 1593725 - 81PF11730DUF3297Protein of unknown function (DUF3297)9.70E-35
WP_011919946.1 1594235 1594637 + 133PF12614RRF_GIRibosome recycling factor1.80E-59
WP_011919945.1 1594847 1594667 - 59PF20027DUF6435Family of unknown function (DUF6435)8.20E-29
WP_011788122.1 1596711 1595046 - 554PF00015
PF17200
PF08269
PF00672
PF17201
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Single Cache domain 2
Cache domain
HAMP domain
Cache 3/Cache 2 fusion domain
1.70E-42
1.90E-28
6.10E-27
1.60E-14
4.10E-11
WP_011788123.1 1597003 1599190 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
7.30E-72
1.40E-71
2.30E-09
WP_011788124.1 1599307 1599877 + 189NO PFAM MATCH---
WP_011788125.1 1599897 1600242 + 114PF19991HMA_2Heavy metal associated domain 21.90E-07
WP_011788126.1 1600278 1600527 + 82PF12732YtxHYtxH-like protein5.60E-04
WP_011788127.1 1600507 1600786 + 92NO PFAM MATCH---
WP_011788128.1 1600803 1601142 + 112PF19436ACS_CODH_B_CACS/CODH beta subunit C-terminal5.60E-06
WP_011919944.1 1601128 1603234 + 701PF00122
PF00702
PF08282
E1-E2_ATPase
Hydrolase
Hydrolase_3
E1-E2 ATPase
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
3.90E-34
1.80E-31
5.40E-04
WP_011919943.1 1603777 1603315 - 153PF13728
PF13098
PF08534
TraF
Thioredoxin_2
Redoxin
F plasmid transfer operon protein
Thioredoxin-like domain
Redoxin
6.50E-06
7.10E-06
2.60E-05
WP_011919942.1 1605939 1603776 - 720PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.50E-31
3.30E-18

Results for WP_032908584.1 [Yersinia enterocolitica subsp. enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005172326.1 2012376 2011776 - 199PF03264
PF14522
PF14537
PF02085
PF09699
Cytochrom_NNT
Cytochrome_C7
Cytochrom_c3_2
Cytochrom_CIII
Paired_CXXCH_1
NapC/NirT cytochrome c family, N-terminal region
Cytochrome c7 and related cytochrome c
Cytochrome c3
Class III cytochrome C family
Doubled CXXCH motif (Paired_CXXCH_1)
7.70E-81
8.40E-08
7.40E-07
3.10E-06
4.50E-06
WP_005165692.1 2012871 2012403 - 155PF03892NapBNitrate reductase cytochrome c-type subunit (NapB)9.70E-47
WP_011815828.1 2015437 2012941 - 831PF00384
PF01568
PF04879
PF10518
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
TAT (twin-arginine translocation) pathway signal sequence
2.80E-90
4.70E-25
3.60E-18
1.80E-06
WP_005165688.1 2015700 2015433 - 88PF03927NapDNapD protein5.00E-24
WP_005172332.1 2016193 2015689 - 167PF12838
PF13187
PF00037
PF13484
PF13183
Fer4_7
Fer4_9
Fer4
Fer4_16
Fer4_8
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S double cluster binding domain
4Fe-4S dicluster domain
3.10E-15
2.70E-13
8.40E-13
8.80E-10
2.20E-08
WP_005165685.1 2016697 2017327 + 209PF00072
PF00196
PF04545
PF08281
Response_reg
GerE
Sigma70_r4
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
1.60E-28
8.10E-23
5.20E-05
6.40E-05
WP_005165683.1 2017644 2017365 - 92PF09904HTH_43Winged helix-turn helix1.70E-38
WP_005172336.1 2018053 2021185 + 1043PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
3.80E-13
1.40E-08
WP_032908584.1 2021743 2022958 + 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-24
WP_032908585.1 2023416 2023890 + 157PF13432
PF12688
PF07719
PF13181
PF00515
TPR_16
TPR_5
TPR_2
TPR_8
TPR_1
Tetratricopeptide repeat
Tetratrico peptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
3.60E-17
4.00E-16
2.90E-11
4.60E-11
8.10E-11
WP_005172345.1 2024052 2024475 + 140PF03960ArsCArsC family4.50E-15
WP_005172348.1 2024476 2025604 + 375PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
4.30E-42
5.10E-24
WP_005172351.1 2025600 2026305 + 234PF02557VanYD-alanyl-D-alanine carboxypeptidase9.10E-37
WP_005172354.1 2026339 2026534 + 64PF13980UPF0370Uncharacterised protein family (UPF0370)6.10E-38
WP_005172356.1 2027196 2026560 - 211PF02230
PF01738
PF00326
PF12146
PF02089
Abhydrolase_2
DLH
Peptidase_S9
Hydrolase_4
Palm_thioest
Phospholipase/Carboxylesterase
Dienelactone hydrolase family
Prolyl oligopeptidase family
Serine aminopeptidase, S33
Palmitoyl protein thioesterase
1.90E-34
1.30E-06
4.40E-05
5.70E-05
1.20E-04
WP_005172359.1 2029343 2027279 - 687PF17176
PF05127
PF13718
PF13604
PF08351
tRNA_bind_3
Helicase_RecD
GNAT_acetyltr_2
AAA_30
TmcA_N
tRNA-binding domain
Helicase
GNAT acetyltransferase 2
AAA domain
tRNA(Met) cytidine acetyltransferase TmcA, N-terminal
1.50E-42
1.20E-41
2.60E-14
2.50E-07
3.60E-05
WP_005172363.1 2029797 2029344 - 150PF04284DUF441Protein of unknown function (DUF441)6.10E-46

Results for WP_005310915.1 back to top

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Couldn't process WP_005310915.1 Genbank filestream. May be corrupt.

Results for WP_018481156.1 [Rhizobium leguminosarum bv. viciae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024319918.1 110598 111606 + 335PF00528
PF19300
BPD_transp_1
BPD_transp_1_N
Binding-protein-dependent transport system inner membrane component
Binding-prot-dependent transport system membrane comp, N-term
8.80E-28
2.10E-13
WP_018483016.1 111607 112744 + 378PF00528
PF12911
BPD_transp_1
OppC_N
Binding-protein-dependent transport system inner membrane component
N-terminal TM domain of oligopeptide transport permease C
3.70E-16
3.00E-12
WP_026236855.1 112754 114422 + 555PF00005
PF02463
PF13304
PF13191
PF13401
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_22
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
AAA domain
3.00E-63
1.30E-16
3.10E-14
1.80E-08
3.30E-08
WP_018497059.1 114444 115305 + 287INFERRED GENE---
WP_018481152.1 115774 115408 - 121NO PFAM MATCH---
WP_018481153.1 116268 115797 - 156NO PFAM MATCH---
WP_204341074.1 117497 116288 - 402NO PFAM MATCH---
WP_018481155.1 118316 117551 - 254PF07812TfuATfuA-like protein8.60E-40
WP_018481156.1 119457 118308 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-43
WP_018481157.1 122460 119472 - 995PF00211
PF13191
PF13424
Guanylate_cyc
AAA_16
TPR_12
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
Tetratricopeptide repeat
1.00E-20
3.50E-19
1.70E-05
WP_018497059.1 122653 123205 + 184INFERRED GENE---

Results for WP_018481596.1 [Rhizobium leguminosarum bv. viciae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_204333235.1 4781 5963 + 393PF00535
PF13641
PF13506
PF13632
Glycos_transf_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_trans_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family 21
Glycosyl transferase family group 2
1.10E-22
1.40E-19
1.30E-05
3.80E-05
WP_018481590.1 5956 8959 + 1000PF00535
PF05401
PF01522
PF13641
PF13649
Glycos_transf_2
NodS
Polysacc_deac_1
Glyco_tranf_2_3
Methyltransf_25
Glycosyl transferase family 2
Nodulation protein S (NodS)
Polysaccharide deacetylase
Glycosyltransferase like family 2
Methyltransferase domain
8.30E-28
1.50E-20
1.50E-19
9.70E-14
5.00E-13
WP_018481591.1 8966 10043 + 358PF00535
PF10111
PF13641
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
4.70E-33
6.40E-22
3.60E-16
WP_018481592.1 10035 11790 + 584PF00005
PF00664
PF02463
PF03193
PF13555
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_29
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
RsgA GTPase
P-loop containing region of AAA domain
4.80E-31
1.50E-14
1.30E-06
3.90E-05
1.30E-04
WP_204341151.1 11795 12956 + 386PF00535
PF10111
PF13641
PF13704
PF13506
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 2
Glycosyl transferase family 21
1.10E-35
6.00E-23
2.20E-22
1.30E-04
2.10E-04
WP_004676311.1 14182 14389 + 68NO PFAM MATCH---
WP_018481594.1 15009 14760 - 82NO PFAM MATCH---
WP_018481595.1 15820 15112 - 235PF07812TfuATfuA-like protein2.40E-41
WP_018481596.1 17010 15816 - 397PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-62
WP_018073816.1 17265 17052 - 70NO PFAM MATCH---
WP_204341155.1 19124 17285 - 612PF13414TPR_11TPR repeat3.90E-04
WP_018073814.1 19568 19142 - 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
2.50E-12
6.00E-08
1.90E-07
1.60E-04
WP_018481598.1 20433 19743 - 229PF13489
PF08241
PF13649
PF08242
PF13847
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.60E-21
9.30E-18
1.10E-14
4.50E-13
9.20E-12
WP_018481599.1 21069 21960 + 296PF19495DUF6030Family of unknown function (DUF6030)1.10E-61
WP_246708359.1 22462 22138 - 107NO PFAM MATCH---
WP_164590689.1 22719 23793 + 357PF00331Glyco_hydro_10Glycosyl hydrolase family 104.90E-69
WP_018481601.1 23824 24976 + 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
8.00E-29
9.70E-25
3.90E-13
1.20E-08
1.40E-06

Results for WP_015343654.1 [Rhizobium tropici] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041678484.1 35278 34378 - 299PF06719
PF12833
PF00165
PF00440
AraC_N
HTH_18
HTH_AraC
TetR_N
AraC-type transcriptional regulator N-terminus
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Bacterial regulatory proteins, tetR family
2.50E-45
1.70E-21
4.60E-12
7.40E-04
WP_085999228.1 35487 36405 + 305PF00248Aldo_ket_redAldo/keto reductase family3.50E-54
WP_015343647.1 37748 36524 - 407PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
1.80E-42
6.50E-09
WP_015343648.1 37941 38592 + 216PF14246
PF00440
PF13384
TetR_C_7
TetR_N
HTH_23
AefR-like transcriptional repressor, C-terminal domain
Bacterial regulatory proteins, tetR family
Homeodomain-like domain
2.00E-20
1.80E-14
2.60E-04
WP_018068484.1 38803 39049 + 82INFERRED GENE---
WP_015343650.1 41505 39165 - 779PF00015
PF00672
MCPsignal
HAMP
Methyl-accepting chemotaxis protein (MCP) signalling domain
HAMP domain
1.10E-51
1.00E-11
WP_015343652.1 42598 42376 - 73NO PFAM MATCH---
WP_015343653.1 43408 42703 - 234PF07812TfuATfuA-like protein1.20E-41
WP_015343654.1 44577 43404 - 390PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-60
WP_015343655.1 44810 44591 - 72NO PFAM MATCH---
WP_041678267.1 46631 44822 - 602PF13414TPR_11TPR repeat5.60E-04
WP_135488172.1 47081 46640 - 146PF12844
PF01381
PF13560
HTH_19
HTH_3
HTH_31
Helix-turn-helix domain
Helix-turn-helix
Helix-turn-helix domain
7.20E-09
3.10E-07
5.30E-05
WP_041678268.1 48160 47260 - 299PF18014
PF13527
PF13673
Acetyltransf_18
Acetyltransf_9
Acetyltransf_10
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.40E-14
5.40E-05
8.10E-05
WP_015343659.1 48394 49519 + 374PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
3.50E-34
1.10E-19
WP_015343660.1 49546 50470 + 307PF02826
PF03446
2-Hacid_dh_C
NAD_binding_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD binding domain of 6-phosphogluconate dehydrogenase
1.40E-45
5.60E-05
WP_015343661.1 50492 50849 + 118PF05899
PF07883
Cupin_3
Cupin_2
EutQ-like cupin domain
Cupin domain
8.10E-23
1.90E-06
WP_015343662.1 51019 52483 + 487PF00171
PF07368
Aldedh
DUF1487
Aldehyde dehydrogenase family
Protein of unknown function (DUF1487)
7.80E-148
7.30E-06

Results for WP_011087309.1 back to top

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Couldn't process WP_011087309.1 Genbank filestream. May be corrupt.

Results for WP_014915081.1 [Pectobacterium brasiliense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_039286987.1 1883479 1884634 + 384PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
1.30E-38
1.10E-06
1.90E-06
5.10E-05
WP_039481392.1 1885561 1884619 - 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.80E-16
4.60E-14
WP_227528060.1 1885834 1887166 + 443PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin1.40E-16
WP_014915076.1 1887192 1888302 + 369PF06032DUF917Protein of unknown function (DUF917)1.60E-125
WP_227528061.1 1888312 1889881 + 522PF05378
PF01968
PF13941
PF06406
Hydant_A_N
Hydantoinase_A
MutL
StbA
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
4.30E-35
3.50E-31
2.00E-07
2.90E-04
WP_014915078.1 1890710 1889969 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.00E-30
8.50E-19
3.70E-06
WP_039519191.1 1893262 1890979 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-207
1.50E-43
WP_014915080.1 1894177 1893319 - 285PF01226Form_Nir_transFormate/nitrite transporter1.40E-73
WP_014915081.1 1896379 1894615 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.00E-83
9.00E-68
WP_014915082.1 1896708 1897794 + 361PF00266Aminotran_5Aminotransferase class-V6.10E-62
WP_227528062.1 1897875 1899165 + 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.80E-151
WP_010277170.1 1899384 1900062 + 225PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.10E-81
1.20E-07
6.70E-06
6.80E-05
WP_010277167.1 1900178 1901852 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-95
1.60E-12
3.10E-06
WP_005967571.1 1901941 1902226 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.80E-29
8.40E-07
9.80E-04
WP_052238771.1 1902949 1902385 - 187PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
4.00E-31
6.60E-15
WP_010277156.1 1903788 1903011 - 258PF00977
PF03060
PF01207
His_biosynth
NMO
Dus
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
1.20E-73
4.10E-05
1.80E-04
WP_039276326.1 1904507 1903769 - 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
1.10E-77
1.40E-08
1.50E-06
1.00E-05
1.60E-05

Results for WP_071990739.1 [Rhodococcus rhodnii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010838372.1 1425438 1423854 - 527PF00005
PF13304
PF02463
PF13558
PF13555
ABC_tran
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
SbcC/RAD50-like, Walker B motif
P-loop containing region of AAA domain
9.10E-36
1.20E-22
1.30E-14
1.70E-07
2.00E-07
WP_010838373.1 1425679 1427461 + 593PF00905
PF05223
Transpeptidase
MecA_N
Penicillin binding protein transpeptidase domain
NTF2-like N-terminal transpeptidase domain
2.40E-38
1.80E-06
WP_010838374.1 1427555 1429235 + 559PF05223
PF00905
MecA_N
Transpeptidase
NTF2-like N-terminal transpeptidase domain
Penicillin binding protein transpeptidase domain
8.30E-08
6.20E-06
WP_010838375.1 1430702 1429250 - 483PF00854
PF07690
PTR2
MFS_1
POT family
Major Facilitator Superfamily
3.70E-60
1.20E-17
WP_143153762.1 1431151 1430764 - 128PF11255DUF3054Protein of unknown function (DUF3054)8.30E-32
WP_010838377.1 1431862 1431307 - 184PF04264YceIYceI-like domain4.20E-44
WP_238559002.1 1433076 1432002 - 357PF03706LPG_synthase_TMLysylphosphatidylglycerol synthase TM region1.20E-27
WP_010838379.1 1433226 1433379 + 50NO PFAM MATCH---
WP_071990739.1 1434369 1435440 + 356PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-25
WP_040773382.1 1437053 1435586 - 488PF00211
PF00672
Guanylate_cyc
HAMP
Adenylate and Guanylate cyclase catalytic domain
HAMP domain
1.70E-19
1.10E-11
WP_010838383.1 1437286 1438321 + 344PF01594AI-2E_transportAI-2E family transporter1.00E-45
WP_010838384.1 1438334 1439012 + 225PF08044DUF1707Domain of unknown function (DUF1707)2.50E-19
WP_010838385.1 1439072 1440335 + 420PF02720DUF222Domain of unknown function (DUF222)6.60E-42
WP_010838386.1 1441431 1440351 - 359PF04213HtaAHtaa9.90E-08
WP_040773363.1 1444411 1441558 - 950PF03176MMPLMMPL family6.90E-69
WP_010838388.1 1445108 1444421 - 228PF01936NYNNYN domain3.50E-07
WP_143153758.1 1445983 1445104 - 292PF02390
PF13649
Methyltransf_4
Methyltransf_25
Putative methyltransferase
Methyltransferase domain
2.00E-53
3.60E-04

Results for WP_010839852.1 back to top

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Couldn't process WP_010839852.1 Genbank filestream. May be corrupt.

Results for WP_034200278.1 [Burkholderia paludis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_031403528.1 79861 81250 + 462PF00860Xan_ur_permeasePermease family5.40E-92
WP_031403527.1 81533 81959 + 141PF00293NUDIXNUDIX domain1.40E-20
WP_031403526.1 82274 82061 - 70NO PFAM MATCH---
WP_152601989.1 82787 85094 + 768NO PFAM MATCH---
WP_034200281.1 85125 86781 + 551NO PFAM MATCH---
WP_034200280.1 86815 87805 + 329NO PFAM MATCH---
WP_052001588.1 87801 88680 + 292NO PFAM MATCH---
WP_034200279.1 88715 92336 + 1206NO PFAM MATCH---
WP_034200278.1 94709 92471 - 745PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.80E-88
WP_031403519.1 95149 94795 - 117NO PFAM MATCH---
WP_031403518.1 95516 95165 - 116NO PFAM MATCH---
WP_034200277.1 99594 95550 - 1347PF00069
PF07714
PF13191
Pkinase
PK_Tyr_Ser-Thr
AAA_16
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
2.40E-42
4.80E-24
2.00E-14
WP_031403622.1 100595 99590 - 334PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
5.70E-17
4.30E-09
WP_063934621.1 102512 101462 - 349PF12833
PF01965
PF00165
HTH_18
DJ-1_PfpI
HTH_AraC
Helix-turn-helix domain
DJ-1/PfpI family
Bacterial regulatory helix-turn-helix proteins, AraC family
1.40E-18
3.10E-14
8.10E-09
WP_152603435.1 103321 102760 - 186NO PFAM MATCH---
WP_052001587.1 104265 103359 - 301PF00892EamAEamA-like transporter family6.70E-20
WP_052001586.1 105593 104591 - 333PF06271RDDRDD family4.40E-16

Results for WP_041211360.1 [Aeromonas caviae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_041211356.1 41201 42395 + 397PF00198
PF00364
PF02817
2-oxoacid_dh
Biotin_lipoyl
E3_binding
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
6.30E-83
3.20E-17
3.70E-15
WP_005300220.1 42501 43668 + 388PF08442
PF00549
PF13549
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
ATP-grasp domain
CoA-ligase
ATP-grasp domain
9.00E-82
3.80E-24
1.10E-14
WP_005300222.1 43667 44540 + 290PF02629
PF00549
PF13607
PF13380
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
CoA binding domain
CoA-ligase
Succinyl-CoA ligase like flavodoxin domain
CoA binding domain
2.50E-31
1.10E-20
1.80E-13
9.60E-04
WP_129146525.1 45468 44646 - 273NO PFAM MATCH---
WP_129146526.1 45863 46469 + 201NO PFAM MATCH---
WP_041211358.1 46810 47266 + 151PF03692CxxCxxCCPutative zinc- or iron-chelating domain1.40E-09
WP_171864802.1 50222 47933 - 762PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-201
4.60E-43
WP_041211359.1 51106 50257 - 282PF01226Form_Nir_transFormate/nitrite transporter1.90E-74
WP_041211360.1 53249 51488 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.90E-79
1.00E-64
WP_039039002.1 53584 54268 + 227PF03483B3_4B3/4 domain3.10E-16
WP_041211362.1 54799 54484 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein2.10E-29
WP_039039005.1 55139 56252 + 370PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
8.90E-59
8.40E-23
WP_010674510.1 56593 56374 - 72PF00313
PF08206
CSD
OB_RNB
'Cold-shock' DNA-binding domain
Ribonuclease B OB domain
3.20E-28
8.70E-04
WP_005325410.1 56821 57139 + 105PF02617ClpSATP-dependent Clp protease adaptor protein ClpS2.20E-34
WP_010674511.1 57199 59452 + 750PF07724
PF17871
PF10431
PF00004
PF07728
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA domain (Cdc48 subfamily)
AAA lid domain
C-terminal, D2-small domain, of ClpB protein
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
2.60E-53
7.40E-29
2.70E-24
1.20E-23
1.20E-20
WP_005300033.1 59740 59521 - 72PF01176
PF16745
eIF-1a
RsgA_N
Translation initiation factor 1A / IF-1
RsgA N-terminal domain
2.20E-26
7.90E-04
WP_010674512.1 60525 59808 - 238PF04377
PF04376
PF13480
ATE_C
ATE_N
Acetyltransf_6
Arginine-tRNA-protein transferase, C terminus
Arginine-tRNA-protein transferase, N terminus
Acetyltransferase (GNAT) domain
8.30E-38
7.30E-18
9.80E-05

Results for WP_023207376.1 [Salmonella enterica subsp. enterica serovar Rubislaw] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000167332.1 471 186 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 2300 626 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125007.1 3097 2413 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_023207374.1 4031 3269 - 253PF01435Peptidase_M48Peptidase family M484.30E-26
WP_023207375.1 5458 4174 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.30E-150
WP_000079590.1 6617 5528 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642870.1 7495 6802 - 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_023207376.1 7630 9391 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.70E-81
3.60E-65
WP_000642539.1 9795 10653 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_001292803.1 10712 12995 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.30E-208
4.80E-44
WP_079849150.1 14026 13066 - 319PF11047SopDSalmonella outer protein D7.50E-179
NP_459946.1 14156 14483 + 109INFERRED GENE---
WP_000067928.1 14601 15399 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134260.1 17112 15690 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
7.50E-14
WP_023263076.1 18478 17329 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.90E-25
1.20E-08
3.30E-07
4.30E-04
WP_000534681.1 19691 18827 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_068995805.1 [Listeria monocytogenes] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_242232647.1 299 0 - 99PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like8.30E-05
WP_068995805.1 1734 420 - 437PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-32
WP_003724653.1 2644 1726 - 305NO PFAM MATCH---
WP_003730944.1 3527 2651 - 291PF00881NitroreductaseNitroreductase family8.40E-11
WP_003730943.1 3841 3523 - 105PF19388DUF5963Family of unknown function (DUF5963)7.00E-25
WP_003730942.1 4631 3881 - 249PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.70E-13
1.20E-04
WP_003724649.1 5518 4630 - 295PF00005
PF02463
PF13304
PF13555
ABC_tran
SMC_N
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
1.00E-21
7.10E-11
1.20E-05
8.60E-04
WP_071661762.1 5732 5582 - 49NO PFAM MATCH---
WP_003724648.1 6633 6276 - 118NO PFAM MATCH---
WP_012681222.1 8480 6923 - 518PF00958
PF00117
PF02540
PF07722
PF01171
GMP_synt_C
GATase
NAD_synthase
Peptidase_C26
ATP_bind_3
GMP synthase C terminal domain
Glutamine amidotransferase class-I
NAD synthase
Peptidase C26
PP-loop family
2.40E-45
2.80E-44
1.20E-09
1.60E-09
1.50E-04

Results for WP_001764662.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023187136.1 back to top

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Couldn't process WP_023187136.1 Genbank filestream. May be corrupt.

Results for WP_001764662.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001530487.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_023187136.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_115398459.1 2904249 2901984 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.00E-52
1.80E-15
5.20E-07
WP_000167332.1 2904763 2904478 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140319.1 2906592 2904918 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000125003.1 2907389 2906705 - 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-85
1.80E-07
2.50E-04
7.50E-04
WP_115398460.1 2908323 2907561 - 253PF01435Peptidase_M48Peptidase family M482.60E-26
WP_115398461.1 2909749 2908465 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)4.80E-150
WP_071650944.1 2910910 2909821 - 362PF00266Aminotran_5Aminotransferase class-V5.60E-70
WP_000642871.1 2911788 2911095 - 230PF04239DUF421Protein of unknown function (DUF421)1.10E-15
WP_023187136.1 2911924 2913685 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-81
7.30E-65
WP_000642542.1 2914089 2914947 + 285PF01226Form_Nir_transFormate/nitrite transporter5.50E-75
WP_001292827.1 2915003 2917286 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.30E-208
4.80E-44
WP_079896460.1 2918321 2917361 - 319PF11047SopDSalmonella outer protein D1.20E-156
WP_000067925.1 2918896 2919694 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.10E-31
3.80E-18
4.90E-06
WP_139387115.1 2920287 2919879 - 135NO PFAM MATCH---
WP_001663770.1 2920661 2920385 - 91NO PFAM MATCH---
WP_000559544.1 2920880 2921882 + 333PF01548
PF02371
DEDD_Tnp_IS110
Transposase_20
Transposase
Transposase IS116/IS110/IS902 family
4.00E-25
1.30E-22
WP_001395480.1 2921897 2922509 + 204INFERRED GENE---

Results for WP_000194824.1 back to top

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Couldn't process WP_000194824.1 Genbank filestream. May be corrupt.

Results for WP_000194823.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194824.1 back to top

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Couldn't process WP_000194824.1 Genbank filestream. May be corrupt.

Results for WP_002950073.1 [Salmonella enterica subsp. houtenae str. CFSAN000552] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_153648989.1 3210452 3209450 - 333PF01548
PF02371
DEDD_Tnp_IS110
Transposase_20
Transposase
Transposase IS116/IS110/IS902 family
4.00E-25
1.10E-21
NP_459944.1 3210719 3210947 + 76INFERRED GENE---
WP_002950043.1 3211045 3211477 + 143NO PFAM MATCH---
WP_002950046.1 3212435 3211637 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
5.00E-31
3.80E-18
4.80E-06
NP_459946.1 3212554 3212686 + 44INFERRED GENE---
WP_024139272.1 3213004 3213964 + 319PF11047SopDSalmonella outer protein D2.70E-167
WP_001292827.1 3216322 3214039 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.30E-208
4.80E-44
WP_024139273.1 3217236 3216378 - 285PF01226Form_Nir_transFormate/nitrite transporter4.50E-75
WP_002950073.1 3219401 3217640 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.20E-81
7.30E-65
WP_000642871.1 3219537 3220230 + 230PF04239DUF421Protein of unknown function (DUF421)1.10E-15
WP_002950077.1 3220415 3221504 + 362PF00266Aminotran_5Aminotransferase class-V3.20E-70
WP_002950080.1 3221576 3222860 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.50E-149
WP_002950081.1 3223002 3223764 + 253PF01435Peptidase_M48Peptidase family M486.50E-26
WP_000125003.1 3223936 3224620 + 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-85
1.80E-07
2.50E-04
7.50E-04
WP_000140319.1 3224733 3226407 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000167332.1 3226562 3226847 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_002950117.1 3227076 3229341 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.00E-52
1.80E-15
3.10E-08

Results for WP_070801990.1 [Salmonella enterica subsp. diarizonae serovar 16:z10:e,n,x,z15] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_309009.1 9652 10276 + 208INFERRED GENE---
WP_000109276.1 10587 11736 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
3.00E-25
9.80E-09
3.80E-07
2.00E-04
WP_070801957.1 11953 13375 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.80E-28
1.00E-13
WP_023247070.1 14312 13514 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.80E-31
2.20E-18
2.80E-06
NP_459946.1 14430 14767 + 112INFERRED GENE---
NP_459947.1 14898 15857 + 319INFERRED GENE---
WP_023247068.1 18212 15929 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.60E-208
4.80E-44
WP_023247067.1 19127 18269 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_070801990.1 21291 19530 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.30E-82
9.30E-65
WP_070801959.1 21427 22120 + 230PF04239DUF421Protein of unknown function (DUF421)1.00E-15
WP_070801960.1 22305 23394 + 362PF00266Aminotran_5Aminotransferase class-V6.20E-69
WP_053509616.1 23464 24748 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-150
WP_000125003.1 24989 25673 + 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-85
1.80E-07
2.50E-04
7.50E-04
WP_000140319.1 25786 27460 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000167332.1 27616 27901 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_053530133.1 28113 30378 + 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
6.70E-52
3.80E-16
1.70E-07
6.40E-04
WP_023247060.1 30414 32163 + 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
1.60E-60
2.00E-36
2.20E-10
1.70E-05
3.30E-05

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001748319.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000194824.1 back to top

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Couldn't process WP_000194824.1 Genbank filestream. May be corrupt.

Results for WP_000194825.1 back to top

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Couldn't process WP_000194825.1 Genbank filestream. May be corrupt.

Results for WP_012210314.1 [Salmonella enterica subsp. arizonae serovar 41:z4,z23:-] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000534689.1 122553 123417 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.40E-118
NP_309009.1 123475 123998 + 174INFERRED GENE---
WP_000109260.1 124302 125451 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
5.00E-24
6.40E-08
4.80E-07
WP_000073214.1 125668 127090 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.20E-28
1.40E-13
WP_000067924.1 128614 127816 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.30E-31
1.90E-18
2.80E-06
WP_024131946.1 129186 130137 + 316PF11047SopDSalmonella outer protein D1.30E-148
WP_001292828.1 132496 130213 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.30E-209
5.00E-44
WP_001140909.1 133372 132556 - 271PF01226Form_Nir_transFormate/nitrite transporter5.40E-75
WP_012210314.1 135579 133818 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.50E-82
3.30E-65
WP_000642865.1 135715 136408 + 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_012210313.1 136593 137682 + 362PF00266Aminotran_5Aminotransferase class-V1.20E-68
WP_000445180.1 137752 139036 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-149
NP_459954.1 139084 139358 + 91INFERRED GENE---
WP_012210310.1 139590 140274 + 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.20E-84
1.70E-07
3.60E-04
6.90E-04
WP_000140319.1 140387 142061 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.30E-100
1.20E-11
3.50E-07
WP_000167329.1 142216 142501 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.60E-29
6.20E-08
9.10E-05
WP_024131944.1 142730 144995 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
7.10E-52
5.40E-15
8.60E-07

Results for WP_001652482.1 [Salmonella enterica subsp. enterica serovar Uganda] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024152338.1 101041 98776 - 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
1.20E-53
1.50E-14
5.00E-07
WP_000167332.1 101555 101270 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_000140324.1 103384 101710 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000125006.1 104181 103497 - 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
4.90E-85
1.70E-07
2.60E-04
8.50E-04
9.10E-04
WP_000792301.1 105115 104353 - 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000445191.1 106541 105257 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.40E-150
WP_000079590.1 107695 106606 - 362PF00266Aminotran_5Aminotransferase class-V2.00E-70
WP_000642867.1 108573 107880 - 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_001652482.1 108709 110470 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.60E-82
3.40E-65
WP_000642539.1 110874 111732 + 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_079798560.1 111791 114074 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
7.70E-208
4.80E-44
WP_079798561.1 115109 114149 - 319PF11047SopDSalmonella outer protein D5.20E-188
WP_010989001.1 115239 115566 + 108NO PFAM MATCH---
WP_000067973.1 115684 116482 + 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.20E-31
2.10E-18
3.00E-06
WP_001134260.1 118195 116773 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
7.50E-14
WP_000109274.1 119561 118412 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.40E-31
6.30E-09
3.30E-07
2.00E-04
WP_000534681.1 120774 119910 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.50E-119

Results for WP_001764390.1 back to top

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Couldn't process WP_001764390.1 Genbank filestream. May be corrupt.

Results for WP_072648361.1 [Escherichia coli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_217800918.1 40472 41336 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.70E-123
WP_000165876.1 41998 41371 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_000109291.1 42312 43461 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
4.70E-27
4.40E-10
1.10E-06
WP_194888254.1 43670 45101 + 476PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.10E-27
8.00E-13
NP_415420.1 45101 45212 + 37INFERRED GENE---
WP_000111043.1 46051 45310 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
WP_001292809.1 48525 46242 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.90E-208
1.60E-43
WP_001140910.1 49395 48579 - 271PF01226Form_Nir_transFormate/nitrite transporter9.10E-75
WP_072648361.1 51603 49842 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.20E-82
6.30E-67
WP_000642852.1 51732 52425 + 230PF04239DUF421Protein of unknown function (DUF421)1.30E-15
WP_000057142.1 52623 53712 + 362PF00266Aminotran_5Aminotransferase class-V1.70E-76
WP_000445231.1 53782 55066 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.40E-151
WP_001353317.1 55234 55999 + 254PF01435Peptidase_M48Peptidase family M483.50E-26
WP_000125016.1 56171 56855 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_000140327.1 56965 58639 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_000167336.1 58798 59083 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_115423529.1 59289 61554 + 754PF03772
PF00753
Competence
Lactamase_B
Competence protein
Metallo-beta-lactamase superfamily
7.90E-52
1.10E-19

Results for WP_001995342.1 [Bacillus paranthracis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_270364791.1 24625 24448 - 58NO PFAM MATCH---
WP_270364792.1 24758 25157 + 132NO PFAM MATCH---
WP_000532946.1 25659 26379 + 239PF01709Transcrip_regTranscriptional regulator9.90E-81
WP_044790667.1 26500 26965 + 154PF00293NUDIXNUDIX domain3.90E-19
WP_270364793.1 28405 27047 - 452PF13276
PF00665
PF13518
PF13333
PF13683
HTH_21
rve
HTH_28
rve_2
rve_3
HTH-like domain
Integrase core domain
Helix-turn-helix domain
Integrase core domain
Integrase core domain
7.00E-20
4.80E-19
1.00E-18
6.30E-17
2.90E-12
WP_000435790.1 28891 29065 + 57NO PFAM MATCH---
WP_000435811.1 29298 29463 + 54NO PFAM MATCH---
WP_000787555.1 29735 30695 + 319NO PFAM MATCH---
WP_001995342.1 30705 31995 + 429PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-54
WP_000975219.1 32023 32845 + 273PF00881NitroreductaseNitroreductase family1.10E-12
WP_001060177.1 32837 34484 + 548PF00664
PF00005
PF13304
PF02463
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC transporter transmembrane region
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
3.70E-22
1.60E-19
2.70E-06
1.70E-05
WP_000033734.1 34480 35494 + 337PF16169
PF14399
PF13529
DUF4872
BtrH_N
Peptidase_C39_2
Domain of unknown function (DUF4872)
Butirosin biosynthesis protein H, N-terminal
Peptidase_C39 like family
2.70E-25
5.70E-16
8.10E-04
WP_000469515.1 35671 36130 + 152NO PFAM MATCH---
WP_004401941.1 36277 36613 + 112INFERRED GENE---
WP_000664704.1 37192 37969 + 258PF00912TransglyTransglycosylase5.80E-61
WP_000841311.1 38156 38807 + 216PF13462
PF01323
PF13743
Thioredoxin_4
DSBA
Thioredoxin_5
Thioredoxin
DSBA-like thioredoxin domain
Thioredoxin
2.00E-36
3.90E-11
3.00E-07
WP_000345218.1 39194 40337 + 380PF08331
PF13484
PF13646
PF03130
PF14697
QueG_DUF1730
Fer4_16
HEAT_2
HEAT_PBS
Fer4_21
Epoxyqueuosine reductase QueG, DUF1730
4Fe-4S double cluster binding domain
HEAT repeats
PBS lyase HEAT-like repeat
4Fe-4S dicluster domain
1.30E-19
1.40E-15
1.80E-09
5.60E-05
7.70E-05

Results for WP_001996261.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001996264.1 114010 113317 - 230PF00072
PF00486
Response_reg
Trans_reg_C
Response regulator receiver domain
Transcriptional regulatory protein, C terminal
8.60E-28
1.70E-23
WP_001996101.1 115268 114023 - 414NO PFAM MATCH---
WP_001996146.1 115770 115947 + 58PF09388SpoOE-likeSpo0E like sporulation regulatory protein8.10E-09
WP_001996221.1 117948 117198 - 249PF03496ADPrib_exo_ToxADP-ribosyltransferase exoenzyme4.60E-58
WP_001996255.1 118787 118046 - 246PF01510Amidase_2N-acetylmuramoyl-L-alanine amidase2.40E-24
WP_001996118.1 120753 119871 - 293PF00561
PF12146
PF12697
PF00975
PF06342
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
Thioesterase
DUF1057
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
Thioesterase domain
Alpha/beta hydrolase of unknown function (DUF1057)
1.20E-33
8.60E-16
2.50E-12
1.70E-09
6.10E-07
WP_001996260.1 121042 121963 + 306PF17384DUF150_CRimP C-terminal SH3 domain2.10E-04
WP_001996111.1 122305 122737 + 143PF10703
PF17409
MoaF
MoaF_C
MoaF N-terminal domain
MoaF C-terminal domain
4.60E-07
4.20E-06
WP_001996261.1 124512 126726 + 737PF02624
PF13649
PF08241
PF08242
PF13847
YcaO
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
6.70E-32
2.00E-06
1.90E-04
2.00E-04
6.50E-04
WP_000682816.1 127595 127989 + 131INFERRED GENE---
WP_000788729.1 127986 128302 + 105INFERRED GENE---
WP_001996228.1 128610 129705 + 364PF18801
PF13424
PF00515
PF07719
RapH_N
TPR_12
TPR_1
TPR_2
response regulator aspartate phosphatase H, N terminal
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.50E-25
2.90E-08
4.70E-07
2.20E-04
WP_001996159.1 129701 129842 + 46NO PFAM MATCH---
WP_001996252.1 130023 130209 + 61PF17209HfqHfq protein7.20E-18
WP_000210395.1 130761 130467 - 97PF01022
PF12840
HTH_5
HTH_20
Bacterial regulatory protein, arsR family
Helix-turn-helix domain
9.20E-12
2.20E-10
WP_042516172.1 131277 130848 - 142PF02600DsbBDisulfide bond formation protein DsbB8.30E-14
WP_001996145.1 131606 131318 - 95NO PFAM MATCH---

Results for WP_000192967.1 back to top

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Couldn't process WP_000192967.1 Genbank filestream. May be corrupt.

Results for WP_009853677.1 [Streptococcus gallolyticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_249551074.1 62751 64959 + 735PF02065
PF16875
PF01055
PF16874
PF16499
Melibiase
Glyco_hydro_36N
Glyco_hydro_31
Glyco_hydro_36C
Melibiase_2
Melibiase
Glycosyl hydrolase family 36 N-terminal domain
Glycosyl hydrolases family 31
Glycosyl hydrolase family 36 C-terminal domain
Alpha galactosidase A
2.30E-144
7.10E-58
3.00E-08
6.30E-07
7.90E-06
WP_249551075.1 66093 65046 - 348NO PFAM MATCH---
WP_003063685.1 66488 66107 - 126PF00581RhodaneseRhodanese-like domain1.80E-13
WP_009853682.1 67468 66499 - 322PF00480
PF01869
ROK
BcrAD_BadFG
ROK family
BadF/BadG/BcrA/BcrD ATPase family
3.20E-74
1.30E-04
WP_012961615.1 67670 67460 - 69PF06014DUF910Bacterial protein of unknown function (DUF910)2.90E-31
WP_009853680.1 68576 67790 - 261PF00881NitroreductaseNitroreductase family7.50E-14
WP_043878527.1 69423 68565 - 285NO PFAM MATCH---
WP_249551076.1 70468 69445 - 340PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-08
WP_009853677.1 71470 70480 - 329PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-12
WP_172855746.1 72057 71469 - 195NO PFAM MATCH---
WP_249551077.1 72731 72083 - 215NO PFAM MATCH---
WP_249551078.1 72936 72762 - 57NO PFAM MATCH---
WP_043878525.1 74564 72947 - 538PF00005
PF00664
PF13304
PF13748
PF02463
ABC_tran
ABC_membrane
AAA_21
ABC_membrane_3
SMC_N
ABC transporter
ABC transporter transmembrane region
AAA domain, putative AbiEii toxin, Type IV TA system
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
1.70E-19
2.40E-14
1.60E-05
2.20E-04
6.60E-04
WP_009853673.1 74923 74656 - 88NO PFAM MATCH---
WP_009853672.1 75694 75163 - 176PF00210FerritinFerritin-like domain4.50E-26
WP_009853671.1 75823 76474 + 216PF06750DiS_P_DiSBacterial Peptidase A24 N-terminal domain3.10E-23
WP_009853670.1 76556 77897 + 446PF01566NrampNatural resistance-associated macrophage protein3.10E-110

Results for WP_004006032.1 [Rothia dentocariosa] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004006024.1 391083 392556 + 490PF00324
PF13520
AA_permease
AA_permease_2
Amino acid permease
Amino acid permease
9.80E-102
3.50E-42
WP_004006025.1 394096 392701 - 464NO PFAM MATCH---
WP_004006026.1 394336 396772 + 811PF09371
PF16921
PF12836
PF00575
PF17674
Tex_N
Tex_YqgF
HHH_3
S1
HHH_9
Tex-like protein N-terminal domain
Tex protein YqgF-like domain
Helix-hairpin-helix motif
S1 RNA binding domain
HHH domain
1.80E-48
1.00E-47
6.30E-25
3.30E-19
2.00E-18
WP_004006027.1 397872 397044 - 275PF00248Aldo_ket_redAldo/keto reductase family1.70E-51
WP_037231816.1 398252 398564 + 103NO PFAM MATCH---
WP_037231818.1 398755 399982 + 408PF00067p450Cytochrome P4502.00E-19
WP_004006030.1 399968 400925 + 318PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
2.50E-28
1.10E-14
2.30E-04
WP_004006031.1 400938 401778 + 279PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.90E-17
2.10E-11
WP_004006032.1 401787 404043 + 751PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-75
WP_037231819.1 404056 405316 + 419PF00881NitroreductaseNitroreductase family3.40E-08
WP_004006034.1 405340 406408 + 355PF07730
PF02518
HisKA_3
HATPase_c
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
1.00E-10
2.90E-07
WP_004006035.1 406412 407018 + 201PF00072
PF00196
PF14493
PF04545
PF08281
Response_reg
GerE
HTH_40
Sigma70_r4
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Helix-turn-helix domain
Sigma-70, region 4
Sigma-70, region 4
2.10E-22
1.10E-13
6.10E-06
4.50E-05
2.00E-04
WP_004006036.1 411042 407085 - 1318PF00176
PF00271
PF08455
PF04434
SNF2-rel_dom
Helicase_C
SNF2_assoc
SWIM
SNF2-related domain
Helicase conserved C-terminal domain
Bacterial SNF2 helicase associated
SWIM zinc finger
2.90E-54
6.00E-15
1.50E-05
7.20E-05
WP_004006037.1 411374 411086 - 95NO PFAM MATCH---
WP_004006038.1 411724 411397 - 108PF07332Phage_holin_3_6Putative Actinobacterial Holin-X, holin superfamily III6.20E-04
WP_004006039.1 412076 411746 - 109NO PFAM MATCH---
WP_004006040.1 412437 412098 - 112NO PFAM MATCH---

Results for WP_004873746.1 [Yersinia mollaretii ATCC 43969] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004873753.1 4034385 4032636 - 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
9.90E-60
1.30E-34
3.40E-10
5.90E-05
7.00E-05
WP_032813146.1 4036703 4034420 - 760PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
9.60E-52
4.10E-17
1.60E-08
1.70E-04
WP_005184672.1 4037384 4037099 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
2.60E-28
4.70E-07
WP_004391091.1 4039118 4037444 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_004873750.1 4039979 4039286 - 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.10E-81
4.30E-07
1.50E-04
5.30E-04
WP_004873749.1 4041562 4040275 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.60E-149
WP_004873748.1 4042783 4041697 - 361PF00266Aminotran_5Aminotransferase class-V8.10E-68
WP_032813173.1 4043980 4042942 - 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
7.40E-62
1.90E-25
WP_004873746.1 4044129 4045896 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-80
1.50E-62
WP_004873745.1 4046404 4047262 + 285PF01226Form_Nir_transFormate/nitrite transporter1.60E-73
WP_004873744.1 4047314 4049597 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.50E-205
1.30E-43
WP_019209496.1 4049675 4050416 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.40E-31
1.70E-18
4.60E-06
WP_032813145.1 4051642 4050493 - 382PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
5.10E-28
5.50E-09
4.20E-06
4.10E-05
WP_004873741.1 4053172 4051879 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
4.80E-35
5.80E-29
WP_032813144.1 4054662 4053318 - 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
8.20E-64
1.90E-22
2.00E-15
8.20E-13
8.00E-07
WP_004873738.1 4055281 4054669 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
3.10E-59
7.70E-05
WP_004873737.1 4059085 4055386 - 1232PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
1.10E-72
3.20E-43
3.60E-28
2.00E-26
4.90E-05

Results for WP_043147146.1 back to top

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Couldn't process WP_043147146.1 Genbank filestream. May be corrupt.

Results for WP_036960343.1 [Providencia alcalifaciens] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_224120631.1 1337468 1341119 + 1216PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
3.10E-74
1.40E-41
1.70E-28
1.60E-27
2.00E-05
WP_006657784.1 1341205 1341826 + 206PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
2.50E-55
1.10E-04
WP_006662184.1 1341850 1343194 + 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
5.80E-65
4.70E-24
5.40E-16
4.20E-15
3.20E-07
WP_006657786.1 1343299 1344592 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.90E-35
2.40E-31
WP_006657787.1 1345584 1344753 - 276NO PFAM MATCH---
WP_006662183.1 1346577 1345782 - 264PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.20E-32
3.90E-18
3.20E-05
WP_006662182.1 1348972 1346689 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-206
2.00E-43
WP_006662181.1 1349918 1349060 - 285PF01226Form_Nir_transFormate/nitrite transporter2.00E-73
WP_036960343.1 1352005 1350250 - 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.10E-82
4.80E-67
WP_006657793.1 1352240 1353284 + 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.40E-58
1.40E-26
WP_117584501.1 1353987 1353465 - 173PF04519BactofilinPolymer-forming cytoskeletal2.30E-20
WP_006657795.1 1354868 1354421 - 148PF01475FURFerric uptake regulator family1.10E-47
WP_006657796.1 1355628 1355100 - 175PF00258
PF12641
PF12724
Flavodoxin_1
Flavodoxin_3
Flavodoxin_5
Flavodoxin
Flavodoxin domain
Flavodoxin domain
1.80E-32
3.90E-10
3.90E-07
WP_006662178.1 1356075 1355781 - 97PF01402
PF19891
RHH_1
DUF6364
Ribbon-helix-helix protein, copG family
Family of unknown function (DUF6364)
2.10E-08
5.20E-04
WP_224120632.1 1358339 1356248 - 696PF00664
PF00005
PF03412
PF02463
PF13191
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
ABC transporter transmembrane region
ABC transporter
Peptidase C39 family
RecF/RecN/SMC N terminal domain
AAA ATPase domain
7.50E-41
1.60E-32
7.40E-08
3.20E-06
6.80E-05
WP_224120633.1 1359671 1358342 - 442PF13437
PF00529
PF16576
PF13533
HlyD_3
CusB_dom_1
HlyD_D23
Biotin_lipoyl_2
HlyD family secretion protein
Cation efflux system protein CusB domain 1
Barrel-sandwich domain of CusB or HlyD membrane-fusion
Biotin-lipoyl like
1.30E-20
2.10E-11
2.30E-08
8.40E-07
WP_154630737.1 1361776 1359688 - 695PF00664
PF00005
PF02463
PF03412
PF13191
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
Peptidase C39 family
AAA ATPase domain
7.50E-45
1.20E-37
4.70E-07
2.30E-05
1.10E-04

Results for WP_077096510.1 [Aeromonas sp. QDB39] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_077096515.1 125785 124690 - 364PF00005
PF08402
PF13304
PF09818
PF02463
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
ABC transporter
TOBE domain
AAA domain, putative AbiEii toxin, Type IV TA system
ATPase of the ABC class
RecF/RecN/SMC N terminal domain
5.60E-33
1.10E-08
5.30E-08
8.50E-06
6.20E-05
WP_077096514.1 127077 126057 - 339PF13343
PF13416
PF01547
PF13531
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
1.20E-28
1.80E-19
1.40E-15
1.20E-13
WP_029303195.1 127905 127197 - 235PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.60E-34
1.60E-19
WP_077096513.1 128146 129289 + 380PF00266Aminotran_5Aminotransferase class-V1.90E-22
WP_077096512.1 129285 130710 + 474PF00202Aminotran_3Aminotransferase class-III5.00E-76
WP_077096511.1 130702 131542 + 279PF00702Hydrolasehaloacid dehalogenase-like hydrolase2.00E-04
WP_016350517.1 133948 131665 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.60E-201
4.70E-43
WP_011705812.1 134842 133993 - 282PF01226Form_Nir_transFormate/nitrite transporter1.50E-73
WP_077096510.1 136983 135222 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
7.60E-80
7.60E-65
WP_011705814.1 137425 137110 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.50E-29
WP_077096509.1 137764 138880 + 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.40E-58
5.30E-23
WP_077096508.1 139481 142259 + 925PF05193
PF00675
Peptidase_M16_C
Peptidase_M16
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
1.80E-36
2.60E-25
WP_077096507.1 143502 142338 - 387PF01053
PF00155
PF03841
PF00266
Cys_Met_Meta_PP
Aminotran_1_2
SelA
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
L-seryl-tRNA selenium transferase
Aminotransferase class-V
5.70E-135
2.30E-06
5.80E-06
3.20E-05
WP_190283617.1 144679 143608 - 356PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
3.70E-33
6.70E-19
WP_019838689.1 145787 145148 - 212PF13460
PF05368
PF03435
PF01370
PF01073
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
3Beta_HSD
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
8.30E-27
2.30E-09
2.80E-07
8.50E-07
3.20E-04
WP_077096505.1 145888 146794 + 301PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
2.20E-39
3.50E-22
3.40E-04
WP_011705821.1 147650 146909 - 246PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
5.60E-57
5.20E-55
1.40E-18
6.30E-08
9.50E-05

Results for WP_024130477.1 [Citrobacter koseri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_071258295.1 696 69 - 208PF00857IsochorismataseIsochorismatase family9.50E-22
WP_012133025.1 1009 2158 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
9.20E-26
7.20E-09
4.10E-07
1.50E-04
WP_024130479.1 2977 2236 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.40E-31
1.60E-18
3.50E-06
WP_012133023.1 5451 3168 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
5.00E-208
4.70E-44
WP_024130478.1 6363 5502 - 286PF01226Form_Nir_transFormate/nitrite transporter4.80E-75
WP_024130477.1 8529 6768 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.60E-83
1.10E-66
WP_071258293.1 8938 10027 + 362PF00266Aminotran_5Aminotransferase class-V3.10E-71
WP_114647423.1 10097 11381 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.60E-151
WP_012133018.1 11562 12246 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
2.60E-85
2.00E-07
4.70E-04
8.90E-04
WP_012133016.1 12359 14033 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.40E-100
7.50E-12
3.70E-07
WP_000167332.1 14190 14475 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_071258291.1 14870 17135 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.50E-49
3.40E-17
1.20E-05
WP_012133012.1 17171 18920 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
2.10E-59
8.10E-36
5.70E-10
1.30E-05
1.40E-04
WP_012133011.1 18916 19894 + 325PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase2.10E-113

Results for WP_065979839.1 [Pseudoalteromonas sp. A41-2] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_075593645.1 1530204 1528578 - 541PF00128
PF16657
Alpha-amylase
Malt_amylase_C
Alpha amylase, catalytic domain
Maltogenic Amylase, C-terminal domain
5.10E-95
3.90E-08
WP_075593644.1 1530638 1530356 - 93NO PFAM MATCH---
WP_075593643.1 1530882 1533672 + 929PF00593
PF07715
PF14905
TonB_dep_Rec
Plug
OMP_b-brl_3
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel family
4.50E-30
6.10E-15
2.10E-14
WP_075593642.1 1533777 1535274 + 498PF04820
PF01266
PF07992
Trp_halogenase
DAO
Pyr_redox_2
Tryptophan halogenase
FAD dependent oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
4.80E-185
2.60E-05
2.80E-04
WP_118844216.1 1535276 1537127 + 616PF00128
PF09087
PF10438
PF16657
PF14701
Alpha-amylase
Cyc-maltodext_N
Cyc-maltodext_C
Malt_amylase_C
hDGE_amylase
Alpha amylase, catalytic domain
Cyclomaltodextrinase, N-terminal
Cyclo-malto-dextrinase C-terminal domain
Maltogenic Amylase, C-terminal domain
Glycogen debranching enzyme, glucanotransferase domain
6.80E-55
6.00E-21
7.50E-19
1.70E-05
8.10E-04
WP_075593640.1 1537221 1539087 + 621PF00128
PF14701
PF16657
Alpha-amylase
hDGE_amylase
Malt_amylase_C
Alpha amylase, catalytic domain
Glycogen debranching enzyme, glucanotransferase domain
Maltogenic Amylase, C-terminal domain
3.90E-25
2.40E-05
2.40E-05
WP_074988286.1 1539079 1540564 + 494PF07690
PF13347
MFS_1
MFS_2
Major Facilitator Superfamily
MFS/sugar transport protein
1.10E-25
3.40E-09
WP_196857710.1 1540576 1542979 + 800PF09137
PF00723
Glucodextran_N
Glyco_hydro_15
Glucodextranase, domain N
Glycosyl hydrolases family 15
6.90E-78
1.20E-41
WP_065979839.1 1545273 1543086 - 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.00E-73
2.80E-70
4.00E-09
WP_036968830.1 1546498 1545478 - 339PF13377
PF00532
PF00356
PF13407
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Bacterial regulatory proteins, lacI family
Periplasmic binding protein domain
2.70E-31
3.80E-20
2.20E-15
2.40E-15
WP_065979840.1 1546904 1547903 + 332PF02685
PF00480
Glucokinase
ROK
Glucokinase
ROK family
4.20E-105
1.50E-11
WP_036968823.1 1547931 1548945 + 337PF13377
PF00532
PF00356
PF13407
PF13458
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_6
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Bacterial regulatory proteins, lacI family
Periplasmic binding protein domain
Periplasmic binding protein
2.20E-44
3.50E-25
1.30E-19
6.00E-17
3.60E-04
WP_065979841.1 1549375 1551226 + 616PF00920ILVD_EDDDehydratase family2.40E-157
WP_036968816.1 1551260 1551881 + 206PF01081AldolaseKDPG and KHG aldolase5.10E-72
WP_196857711.1 1551899 1552904 + 334PF02800
PF00044
PF03447
Gp_dh_C
Gp_dh_N
NAD_binding_3
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Homoserine dehydrogenase, NAD binding domain
1.70E-65
5.90E-37
8.00E-06
WP_075593638.1 1553028 1553373 + 114NO PFAM MATCH---
WP_118844217.1 1553392 1553836 + 147NO PFAM MATCH---

Results for WP_002163180.1 [Acinetobacter sp. AOR33_HL] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005802836.1 289 982 + 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
1.00E-10
WP_002115351.1 1970 1025 - 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
2.10E-12
1.90E-06
WP_002163172.1 3059 1982 - 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
8.10E-54
4.00E-18
1.50E-05
WP_002163168.1 4480 3292 - 395PF03573OprDouter membrane porin, OprD family5.60E-35
WP_002163165.1 5401 4492 - 302PF03781FGE-sulfataseSulfatase-modifying factor enzyme 12.40E-59
WP_002163163.1 7112 5426 - 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
1.30E-77
3.50E-06
3.40E-05
WP_002163160.1 7485 8832 + 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
4.20E-48
1.10E-23
2.80E-09
WP_013198520.1 8863 10145 + 427INFERRED GENE---
WP_002163180.1 10396 12595 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.60E-75
6.60E-73
1.80E-08
WP_002163166.1 14331 12660 - 556PF05199
PF00732
PF01266
PF13450
GMC_oxred_C
GMC_oxred_N
DAO
NAD_binding_8
GMC oxidoreductase
GMC oxidoreductase
FAD dependent oxidoreductase
NAD(P)-binding Rossmann-like domain
1.00E-17
1.80E-09
2.20E-05
2.30E-05
WP_002163177.1 15252 14358 - 297PF07859
PF10340
PF20434
PF00326
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
2.80E-54
1.70E-11
3.00E-09
1.40E-05
WP_130139454.1 16177 15322 - 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.60E-50
3.90E-36
2.00E-11
WP_002163158.1 17709 16221 - 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
4.90E-21
1.10E-16
2.70E-12
1.90E-11
2.00E-08
WP_019767898.1 17844 18858 + 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
9.20E-36
1.00E-14
4.80E-05
WP_000722967.1 19509 18900 - 202PF05683Fumerase_CFumarase C-terminus5.90E-41
WP_002163154.1 20405 19505 - 299PF05681FumeraseFumarate hydratase (Fumerase)3.50E-74
WP_005802827.1 21753 20454 - 432PF07690
PF12832
MFS_1
MFS_1_like
Major Facilitator Superfamily
MFS_1 like family
3.70E-48
2.10E-05

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Couldn't process WP_030652015.1 Genbank filestream. May be corrupt.

Results for WP_003180177.1 back to top

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Couldn't process WP_003180177.1 Genbank filestream. May be corrupt.

Results for WP_073802385.1 [Streptomyces sp. CB00271] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_107483073.1 2614697 2614532 - 54PF19409Thiopep_preThiopeptide-type bacteriocin precursor2.50E-07
WP_073802392.1 2615258 2615093 - 54PF19409Thiopep_preThiopeptide-type bacteriocin precursor2.90E-10
WP_073802391.1 2615633 2615468 - 54PF19409Thiopep_preThiopeptide-type bacteriocin precursor2.90E-09
WP_073802390.1 2615873 2617505 + 543PF01494
PF02254
PF07992
FAD_binding_3
TrkA_N
Pyr_redox_2
FAD binding domain
TrkA-N domain
Pyridine nucleotide-disulphide oxidoreductase
4.20E-63
5.30E-04
9.90E-04
WP_073802389.1 2618375 2617634 - 246PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
4.80E-07
2.20E-04
WP_073802388.1 2619326 2618408 - 305PF00005
PF13304
PF02463
PF13558
ABC_tran
AAA_21
SMC_N
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
SbcC/RAD50-like, Walker B motif
6.70E-32
1.60E-15
9.70E-07
7.00E-04
WP_073802387.1 2620348 2619325 - 340PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term3.60E-39
WP_079277172.1 2621847 2620362 - 494PF00881NitroreductaseNitroreductase family2.60E-05
WP_073802385.1 2623861 2621929 - 643PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-62
WP_073802384.1 2625671 2623853 - 605NO PFAM MATCH---
WP_073802383.1 2628211 2625667 - 847NO PFAM MATCH---
WP_079277171.1 2629353 2628207 - 381NO PFAM MATCH---
WP_073802948.1 2629695 2630406 + 236PF13649
PF08241
PF13489
PF05401
PF08242
Methyltransf_25
Methyltransf_11
Methyltransf_23
NodS
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Nodulation protein S (NodS)
Methyltransferase domain
1.00E-14
1.20E-14
3.50E-11
3.20E-08
8.30E-08
WP_073802382.1 2630650 2631292 + 213PF13649
PF08241
PF13489
PF08242
PF05724
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_12
TPMT
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Thiopurine S-methyltransferase (TPMT)
1.30E-18
1.90E-14
4.40E-13
1.40E-12
6.30E-12
WP_073802381.1 2631314 2632619 + 434PF06722
PF13579
DUF1205
Glyco_trans_4_4
Protein of unknown function (DUF1205)
Glycosyl transferase 4-like domain
4.00E-19
3.60E-05
WP_073802380.1 2632663 2633815 + 383PF01041
PF00266
PF00155
DegT_DnrJ_EryC1
Aminotran_5
Aminotran_1_2
DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotransferase class-V
Aminotransferase class I and II
3.60E-89
7.80E-09
7.90E-07
WP_073802379.1 2633960 2635028 + 355PF00483
PF12804
PF07959
PF00132
NTP_transferase
NTP_transf_3
Fucokinase
Hexapep
Nucleotidyl transferase
MobA-like NTP transferase domain
L-fucokinase
Bacterial transferase hexapeptide (six repeats)
2.80E-45
2.00E-13
2.50E-05
6.60E-04

Results for WP_037657434.1 back to top

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Couldn't process WP_037657434.1 Genbank filestream. May be corrupt.

Results for WP_037657436.1 [Streptomyces griseofuscus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_037657426.1 1293223 1293397 + 57NO PFAM MATCH---
WP_078967444.1 1295424 1293459 - 654PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-81
WP_037657428.1 1296173 1295420 - 250PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
2.00E-25
2.10E-18
WP_078967448.1 1297129 1296169 - 319PF00005
PF13304
PF02463
PF13175
PF13558
ABC_tran
AAA_21
SMC_N
AAA_15
SbcC_Walker_B
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
SbcC/RAD50-like, Walker B motif
2.10E-29
6.30E-17
6.50E-07
1.30E-04
5.30E-04
WP_051850264.1 1299603 1298520 - 360PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.30E-91
WP_243279780.1 1302287 1299599 - 895PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.20E-38
WP_037657432.1 1304112 1302510 - 533PF00881NitroreductaseNitroreductase family2.30E-12
WP_243279781.1 1306046 1304237 - 602PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-78
WP_037657436.1 1308429 1306158 - 756NO PFAM MATCH---
WP_078967446.1 1309576 1308451 - 374PF03704
PF00486
PF13428
PF14559
BTAD
Trans_reg_C
TPR_14
TPR_19
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
Tetratricopeptide repeat
Tetratricopeptide repeat
8.00E-36
3.40E-08
6.10E-05
3.50E-04
WP_037657437.1 1309869 1310064 + 64NO PFAM MATCH---
WP_037657439.1 1311053 1310267 - 261PF13472
PF00657
Lipase_GDSL_2
Lipase_GDSL
GDSL-like Lipase/Acylhydrolase family
GDSL-like Lipase/Acylhydrolase
1.20E-26
3.30E-12
WP_037657441.1 1311392 1312190 + 265PF13350
PF18369
Y_phosphatase3
PKS_DE
Tyrosine phosphatase family
Polyketide synthase dimerisation element domain
1.20E-62
9.40E-04
WP_037657443.1 1312356 1312233 - 40PF19621DUF6126Family of unknown function (DUF6126)2.50E-19
WP_037657445.1 1312979 1312352 - 208PF13560
PF01381
PF07883
PF12844
PF02311
HTH_31
HTH_3
Cupin_2
HTH_19
AraC_binding
Helix-turn-helix domain
Helix-turn-helix
Cupin domain
Helix-turn-helix domain
AraC-like ligand binding domain
3.50E-17
2.60E-14
7.60E-14
2.00E-08
4.20E-06
WP_037657447.1 1314445 1313059 - 461PF00202Aminotran_3Aminotransferase class-III9.70E-86
WP_037657449.1 1316340 1314441 - 632PF13292
PF02779
PF02780
PF00676
PF02775
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
1-deoxy-D-xylulose-5-phosphate synthase
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
1.50E-109
2.40E-36
2.00E-27
3.50E-08
1.40E-06

Results for WP_062849011.1 [Acinetobacter seifertii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004702815.1 2665687 2666521 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.50E-48
1.70E-41
3.00E-13
WP_151683820.1 2666543 2668067 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
8.60E-17
4.50E-14
1.60E-12
4.80E-10
2.60E-07
WP_151683822.1 2668180 2669056 + 291PF04072LCMLeucine carboxyl methyltransferase3.90E-38
WP_151683824.1 2670078 2669064 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
1.80E-37
1.40E-14
2.10E-05
WP_151683826.1 2670212 2671700 + 495PF00743
PF13738
PF13450
PF07992
PF13434
FMO-like
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
7.30E-19
3.80E-16
2.80E-11
3.20E-11
1.20E-08
WP_151683828.1 2671744 2672599 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
1.40E-50
3.20E-36
2.60E-11
WP_151683830.1 2672671 2673565 + 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
6.80E-56
1.60E-10
5.30E-10
7.30E-06
4.50E-04
WP_151683832.1 2673592 2675263 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
9.70E-18
1.60E-09
2.60E-05
4.60E-05
WP_062849011.1 2677527 2675328 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.60E-75
4.90E-73
1.80E-08
WP_151683834.1 2679059 2677778 - 426PF03573OprDouter membrane porin, OprD family6.00E-106
WP_151683836.1 2680437 2679090 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
3.30E-47
6.40E-24
1.50E-08
WP_151683838.1 2680808 2682494 + 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
1.50E-76
7.80E-05
1.20E-04
WP_151683864.1 2682519 2683473 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 11.60E-67
WP_151683840.1 2683485 2684673 + 395PF03573OprDouter membrane porin, OprD family1.50E-33
WP_151683843.1 2684906 2685983 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
1.00E-53
9.40E-19
1.50E-05
WP_151683845.1 2685995 2686940 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
9.30E-13
8.70E-06
WP_005802836.1 2687676 2686983 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
1.00E-10

Results for WP_077168177.1 back to top

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Couldn't process WP_077168177.1 Genbank filestream. May be corrupt.

Results for WP_044099602.1 [Acinetobacter pittii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017386375.1 35369 36203 + 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.50E-48
2.00E-41
3.00E-13
WP_202732770.1 36225 37749 + 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
5.50E-17
1.60E-14
6.10E-14
3.10E-10
4.60E-07
WP_238517586.1 37863 38739 + 291PF04072LCMLeucine carboxyl methyltransferase7.90E-38
WP_238517587.1 39764 38750 - 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.00E-38
7.70E-15
1.70E-04
WP_238517588.1 39900 41388 + 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
1.60E-20
9.30E-17
7.10E-12
2.80E-11
5.10E-09
WP_238517589.1 41432 42287 + 284PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3.70E-51
1.60E-36
1.30E-11
WP_238517590.1 42359 43253 + 297PF07859
PF10340
PF20434
PF00326
PF12146
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
Hydrolase_4
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Serine aminopeptidase, S33
5.30E-55
2.40E-11
7.00E-09
2.50E-05
4.00E-04
WP_238517591.1 43280 44951 + 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
9.80E-18
1.20E-09
2.60E-05
5.70E-05
WP_044099602.1 47215 45016 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.20E-75
4.90E-73
1.80E-08
WP_204084621.1 48748 47467 - 426PF03573OprDouter membrane porin, OprD family2.80E-104
WP_238517592.1 50126 48779 - 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
5.70E-48
1.00E-23
9.10E-09
WP_238517593.1 50499 52185 + 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
9.80E-78
7.10E-06
1.60E-05
WP_238517597.1 52210 53164 + 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 13.10E-68
WP_238517594.1 53176 54364 + 395PF03573OprDouter membrane porin, OprD family3.30E-35
WP_238517595.1 54598 55675 + 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
1.00E-53
9.20E-19
1.30E-05
WP_238517596.1 55687 56632 + 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
1.70E-12
3.60E-06
WP_005802836.1 57369 56676 - 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
1.00E-10

Results for WP_064375366.1 [Klebsiella michiganensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025107510.1 73333 72421 - 303PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
1.10E-27
5.10E-14
WP_064358368.1 74130 73332 - 265PF00456
PF13292
PF00676
PF02775
PF09364
Transketolase_N
DXP_synthase_N
E1_dh
TPP_enzyme_C
XFP_N
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
XFP N-terminal domain
8.50E-44
5.80E-15
1.00E-06
1.90E-04
2.50E-04
WP_014228634.1 75408 74142 - 421PF03611EIIC-GATPTS system sugar-specific permease component6.70E-119
WP_014228635.1 75701 75425 - 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit3.70E-12
WP_025107508.1 75823 76681 + 285PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
5.60E-16
1.60E-08
WP_004871674.1 77476 76735 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.60E-32
8.10E-19
2.70E-06
WP_014228637.1 79962 77679 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.30E-205
1.80E-43
WP_267649582.1 80871 80013 - 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-74
WP_064375366.1 83017 81256 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-82
1.40E-66
WP_014228639.1 83131 83824 + 230PF04239DUF421Protein of unknown function (DUF421)7.20E-15
WP_004849472.1 84010 85099 + 362PF00266Aminotran_5Aminotransferase class-V1.80E-68
WP_064375367.1 85172 86456 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.80E-152
WP_004849475.1 86748 87432 + 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
5.70E-82
2.00E-07
WP_004100702.1 87569 89243 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-98
7.70E-12
1.00E-06
WP_004100704.1 89393 89681 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.10E-08
9.30E-05
WP_064375368.1 89896 92152 + 751PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
1.50E-47
7.00E-18
2.40E-04
WP_004849478.1 92197 93946 + 582PF00664
PF00005
PF02463
PF13191
PF00270
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
DEAD/DEAH box helicase
2.00E-59
4.90E-36
1.80E-10
5.60E-06
4.90E-05

Results for WP_005159893.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005159893.1 1942 175 - 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-81
1.20E-64
WP_005159895.1 2090 3128 + 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.90E-61
2.20E-26
WP_005159898.1 3274 3967 + 230PF04239DUF421Protein of unknown function (DUF421)7.10E-16
WP_005159900.1 4173 5259 + 361PF00266Aminotran_5Aminotransferase class-V1.00E-66
WP_005159903.1 5385 6672 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.40E-148
WP_005159905.1 6910 7603 + 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.40E-81
8.30E-07
1.60E-04
2.80E-04
WP_004391091.1 7771 9445 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_005159907.1 9508 9793 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.10E-28
8.20E-07
WP_023160775.1 10129 12415 + 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.40E-52
4.00E-20
1.30E-08

Results for WP_005177265.1 [Yersinia enterocolitica subsp. palearctica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005177252.1 1276059 1276260 + 66NO PFAM MATCH---
WP_005165661.1 1276572 1277109 + 178PF13505
PF06316
OMP_b-brl
Ail_Lom
Outer membrane protein beta-barrel domain
Enterobacterial Ail/Lom protein
4.10E-31
6.40E-25
WP_011817033.1 1277264 1278480 + 405INFERRED GENE---
WP_005165667.1 1278737 1278545 - 63PF13980UPF0370Uncharacterised protein family (UPF0370)2.30E-35
WP_013650262.1 1279476 1278771 - 234PF02557VanYD-alanyl-D-alanine carboxypeptidase9.00E-37
WP_005165671.1 1280606 1279478 - 375PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
7.40E-43
2.00E-24
WP_005165673.1 1281030 1280607 - 140PF03960ArsCArsC family2.80E-15
WP_005165675.1 1281666 1281192 - 157PF13432
PF12688
PF07719
PF00515
PF13181
TPR_16
TPR_5
TPR_2
TPR_1
TPR_8
Tetratricopeptide repeat
Tetratrico peptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-15
6.50E-15
8.60E-11
2.20E-10
9.00E-10
WP_005177265.1 1283340 1282125 - 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.60E-24
WP_005165681.1 1286909 1283777 - 1043PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
3.10E-13
6.70E-09
WP_005165683.1 1287118 1287397 + 92PF09904HTH_43Winged helix-turn helix1.70E-38
WP_005165685.1 1288065 1287435 - 209PF00072
PF00196
PF04545
PF08281
Response_reg
GerE
Sigma70_r4
Sigma70_r4_2
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Sigma-70, region 4
1.60E-28
8.10E-23
5.20E-05
6.40E-05
WP_005165687.1 1288569 1289073 + 167PF12838
PF13187
PF00037
PF13484
PF13183
Fer4_7
Fer4_9
Fer4
Fer4_16
Fer4_8
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S double cluster binding domain
4Fe-4S dicluster domain
4.80E-15
3.90E-13
6.90E-13
1.00E-09
2.10E-08
WP_005165688.1 1289062 1289329 + 88PF03927NapDNapD protein5.00E-24
WP_005165690.1 1289325 1291821 + 831PF00384
PF01568
PF04879
PF10518
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
TAT (twin-arginine translocation) pathway signal sequence
8.60E-91
4.70E-25
3.60E-18
1.80E-06
WP_005165692.1 1291891 1292359 + 155PF03892NapBNitrate reductase cytochrome c-type subunit (NapB)9.70E-47
WP_005165694.1 1292386 1292986 + 199PF03264
PF14522
PF14537
PF02085
PF09699
Cytochrom_NNT
Cytochrome_C7
Cytochrom_c3_2
Cytochrom_CIII
Paired_CXXCH_1
NapC/NirT cytochrome c family, N-terminal region
Cytochrome c7 and related cytochrome c
Cytochrome c3
Class III cytochrome C family
Doubled CXXCH motif (Paired_CXXCH_1)
4.30E-80
8.00E-08
6.10E-07
3.40E-06
8.70E-06

Results for WP_004849467.1 back to top

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Couldn't process WP_004849467.1 Genbank filestream. May be corrupt.

Results for WP_063423677.1 [Pseudomonas putida] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063424668.1 3882483 3881964 - 172PF04657DMT_YdcZPutative inner membrane exporter, YdcZ1.00E-38
WP_049275956.1 3883293 3882711 - 193NO PFAM MATCH---
WP_063424670.1 3884744 3883451 - 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
7.90E-13
6.30E-05
WP_063424672.1 3885169 3884740 - 142PF09990DUF2231Predicted membrane protein (DUF2231)3.90E-11
WP_081237966.1 3885333 3885621 + 95PF13827DUF4189Domain of unknown function (DUF4189)6.30E-05
WP_169725140.1 3885935 3888926 + 996PF20249VasX_NVasX toxin N-terminal region2.40E-23
WP_063423679.1 3888928 3889807 + 292PF20455DUF6708Family of unknown function (DUF6708)7.70E-09
WP_063423678.1 3890606 3889793 - 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
2.60E-22
1.30E-21
1.10E-15
2.60E-13
4.50E-08
WP_063423677.1 3893056 3890869 - 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.00E-72
7.80E-72
3.00E-08
WP_063423676.1 3893400 3893856 + 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
3.40E-23
7.00E-08
3.90E-05
WP_063423675.1 3893855 3896105 + 749PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
2.00E-33
5.10E-30
1.60E-04
WP_063423674.1 3896123 3897467 + 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
2.50E-24
3.70E-22
WP_063423673.1 3897621 3898629 + 335PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.80E-35
3.80E-23
WP_063423672.1 3899435 3898646 - 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
8.00E-28
2.10E-04
WP_063423671.1 3900303 3899661 - 213PF01810LysELysE type translocator8.80E-30
WP_012271937.1 3900554 3900353 - 66PF06945DUF1289Protein of unknown function (DUF1289)1.50E-15
WP_016499285.1 3900880 3900562 - 105NO PFAM MATCH---

Results for WP_022647625.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_035216469.1 [Agrobacterium sp. CGMCC 11546] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_006315594.1 1296167 1294943 - 407PF00480
PF13545
ROK
HTH_Crp_2
ROK family
Crp-like helix-turn-helix domain
1.80E-15
3.20E-04
WP_006315595.1 1296411 1297452 + 346PF13407
PF00532
PF13377
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Periplasmic binding protein domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein-like domain
1.30E-59
1.90E-07
7.10E-04
WP_006315596.1 1297532 1298846 + 437PF02653BPD_transp_2Branched-chain amino acid transport system / permease component4.20E-27
WP_176072078.1 1298864 1299647 + 260PF00005
PF13304
PF02463
PF09818
PF13604
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_30
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
ATPase of the ABC class
AAA domain
1.00E-29
1.30E-10
1.30E-06
4.10E-05
9.40E-05
WP_006315598.1 1300083 1299849 - 77NO PFAM MATCH---
WP_006315599.1 1300616 1300178 - 145PF01381
PF13560
PF12844
PF13443
HTH_3
HTH_31
HTH_19
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
7.30E-13
1.10E-10
1.50E-07
1.20E-06
WP_006315600.1 1301891 1300742 - 382NO PFAM MATCH---
WP_006315601.1 1302601 1301887 - 237PF07812TfuATfuA-like protein7.40E-41
WP_035216469.1 1303797 1302600 - 398PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.90E-49
WP_006315603.1 1304263 1303834 - 142NO PFAM MATCH---
WP_003509562.1 1304271 1306224 + 651INFERRED GENE---
WP_006315606.1 1306396 1306888 + 163NO PFAM MATCH---
WP_006315607.1 1307089 1307380 + 96NO PFAM MATCH---
WP_006315609.1 1307836 1308751 + 304PF01261AP_endonuc_2Xylose isomerase-like TIM barrel6.50E-35
WP_006315610.1 1310226 1308828 - 465PF00722
PF00353
PF03935
Glyco_hydro_16
HemolysinCabind
SKN1_KRE6_Sbg1
Glycosyl hydrolases family 16
RTX calcium-binding nonapeptide repeat (4 copies)
Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1
1.30E-35
9.50E-10
1.90E-08
WP_035216471.1 1310497 1310980 + 160PF01272GreA_GreBTranscription elongation factor, GreA/GreB, C-term3.90E-18
WP_006315612.1 1312459 1311034 - 474PF04932Wzy_CO-Antigen ligase2.10E-05

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_020996515.1 back to top

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Couldn't process WP_020996515.1 Genbank filestream. May be corrupt.

Results for WP_033145089.1 back to top

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Couldn't process WP_033145089.1 Genbank filestream. May be corrupt.

Results for WP_020730397.1 [Mycobacterium shottsii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076612358.1 2141748 2142619 + 290INFERRED GENE---
WP_198967566.1 2143782 2143104 - 225PF08751TrwCTrwC relaxase1.10E-12
WP_020725873.1 2143778 2144879 + 367INFERRED GENE---
WP_076612358.1 2144928 2145799 + 290INFERRED GENE---
WP_259594168.1 2146245 2145795 - 149PF00934PEPE family1.80E-32
YP_177838.1 2146481 2146766 + 95INFERRED GENE---
WP_198967569.1 2147189 2146883 - 101PF06013WXG100Proteins of 100 residues with WXG9.00E-17
WP_231609005.1 2148322 2147296 - 341PF00823
PF12484
PPE
PPE-SVP
PPE family
PPE-SVP subfamily C-terminal region
1.80E-46
2.00E-09
WP_020730397.1 2148820 2149132 + 103PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.50E-09
WP_198967571.1 2149803 2149371 - 143NO PFAM MATCH---
WP_020730398.1 2150564 2151350 + 261PF18029
PF00903
Glyoxalase_6
Glyoxalase
Glyoxalase-like domain
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
1.30E-22
2.10E-09
WP_259594170.1 2151406 2152126 + 239PF04069OpuACSubstrate binding domain of ABC-type glycine betaine transport system1.80E-28
WP_076612358.1 2152122 2152993 + 290INFERRED GENE---
WP_259594286.1 2152991 2153177 + 61PF04069OpuACSubstrate binding domain of ABC-type glycine betaine transport system8.00E-06
WP_259594172.1 2153714 2154320 + 201NO PFAM MATCH---
WP_198967573.1 2154644 2155253 + 202PF14032PknH_CPknH-like extracellular domain7.30E-22
WP_076612358.1 2155405 2156276 + 290INFERRED GENE---

Results for WP_064688025.1 [Rhodococcus sp. BH5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_270008821.1 176650 176032 - 205PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
2.10E-20
3.40E-20
3.90E-04
WP_003943587.1 177849 176646 - 400PF07730
PF02518
PF13581
HisKA_3
HATPase_c
HATPase_c_2
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Histidine kinase-like ATPase domain
1.70E-15
5.80E-07
6.80E-04
WP_039973533.1 177963 179010 + 348PF02687FtsXFtsX-like permease family2.50E-11
WP_003943539.1 179006 179747 + 246PF00005
PF02463
PF13604
PF13304
PF13555
ABC_tran
SMC_N
AAA_30
AAA_21
AAA_29
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
2.30E-32
2.80E-10
2.40E-07
6.30E-07
7.70E-06
WP_003943598.1 179858 180299 + 146PF13426
PF13188
PF00989
PF08448
PAS_9
PAS_8
PAS
PAS_4
PAS domain
PAS domain
PAS fold
PAS fold
9.00E-10
1.40E-07
6.10E-07
9.20E-07
WP_003943606.1 180932 180305 - 208PF00440TetR_NBacterial regulatory proteins, tetR family2.70E-12
WP_037130941.1 180983 181955 + 323PF04321RmlD_sub_bindRmlD substrate binding domain2.00E-04
WP_030535883.1 183194 181901 - 430PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-44
WP_064688025.1 184531 183190 - 446PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-54
WP_050657051.1 185954 184523 - 476PF02129
PF08530
Peptidase_S15
PepX_C
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
2.90E-26
2.30E-08
WP_047272718.1 186763 185950 - 270NO PFAM MATCH---
WP_047272767.1 187046 186857 - 62NO PFAM MATCH---
WP_054827487.1 187138 188398 + 419PF05977
PF07690
MFS_3
MFS_1
Transmembrane secretion effector
Major Facilitator Superfamily
2.00E-31
6.10E-17
WP_162114201.1 188482 189550 + 355PF01032
PF00950
FecCD
ABC-3
FecCD transport family
ABC 3 transport family
7.80E-96
6.90E-05
WP_047272721.1 189546 190341 + 264PF00005
PF13304
PF02463
PF13191
PF13175
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA ATPase domain
4.20E-29
4.60E-12
6.30E-07
1.80E-05
6.20E-05
WP_063315292.1 190337 191318 + 326PF01497Peripla_BP_2Periplasmic binding protein2.20E-22
WP_007735907.1 191314 191998 + 227PF00881NitroreductaseNitroreductase family1.80E-17

Results for WP_032757264.1 [Streptomyces microflavus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032757250.1 263297 265568 + 756NO PFAM MATCH---
WP_032757252.1 265557 267537 + 659PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-81
WP_032757254.1 267590 269222 + 543PF00881NitroreductaseNitroreductase family1.30E-17
WP_032757256.1 269237 271952 + 904PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.20E-47
WP_032757258.1 271948 272998 + 349PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.80E-94
WP_032757260.1 272994 274104 + 369PF02163Peptidase_M50Peptidase family M501.80E-04
WP_032757262.1 274152 275109 + 318PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
8.40E-29
6.70E-15
3.20E-05
7.90E-05
WP_015609025.1 275162 275918 + 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
6.00E-29
1.10E-19
2.30E-04
WP_032757264.1 275914 277924 + 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.10E-81
WP_015609023.1 278178 278001 - 58NO PFAM MATCH---
WP_051821830.1 278550 279834 + 427PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
1.80E-20
3.30E-08
WP_032757266.1 279830 280085 + 84NO PFAM MATCH---
WP_078657463.1 281164 280168 - 331PF00196
PF13412
GerE
HTH_24
Bacterial regulatory proteins, luxR family
Winged helix-turn-helix DNA-binding
3.50E-05
5.80E-04
WP_015609019.1 281695 285229 + 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.20E-31
1.90E-24
2.80E-21
2.20E-16
2.20E-15
WP_190167724.1 285305 285848 + 180PF07702UTRAUTRA domain9.10E-24
WP_158706528.1 286005 285834 - 56NO PFAM MATCH---
WP_032757270.1 286658 286070 - 195PF13305
PF00440
TetR_C_33
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
1.80E-17
1.70E-10

Results for WP_032759559.1 [Streptomyces microflavus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_051821990.1 26058 26262 + 67NO PFAM MATCH---
WP_229887871.1 26421 26841 + 139NO PFAM MATCH---
WP_032759556.1 26903 27236 + 110PF03992ABMAntibiotic biosynthesis monooxygenase1.10E-15
WP_158706570.1 27558 28050 + 163PF16369GH43_CC-terminal lipocalin-like domain6.00E-05
WP_190167747.1 28287 40863 + 4191PF00501
PF00109
PF00668
PF00550
PF00698
AMP-binding
ketoacyl-synt
Condensation
PP-binding
Acyl_transf_1
AMP-binding enzyme
Beta-ketoacyl synthase, N-terminal domain
Condensation domain
Phosphopantetheine attachment site
Acyl transferase domain
4.40E-164
4.00E-74
1.50E-71
1.40E-44
4.20E-42
WP_229887873.1 41151 41397 + 81NO PFAM MATCH---
WP_032759557.1 41535 44325 + 929PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.80E-19
WP_229887875.1 44375 46277 + 633NO PFAM MATCH---
WP_032759559.1 46273 48184 + 636PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.80E-69
WP_051821991.1 48243 50010 + 588PF14028
PF00881
Lant_dehydr_C
Nitroreductase
Lantibiotic biosynthesis dehydratase C-term
Nitroreductase family
5.80E-51
9.80E-09
WP_032759560.1 50984 50006 - 325PF13354
PF00144
Beta-lactamase2
Beta-lactamase
Beta-lactamase enzyme family
Beta-lactamase
1.10E-36
7.80E-30
WP_015606374.1 51205 52078 + 290PF00126
PF03466
HTH_1
LysR_substrate
Bacterial regulatory helix-turn-helix protein, lysR family
LysR substrate binding domain
1.10E-20
1.30E-07
WP_229887876.1 52101 52989 + 295PF13354
PF00144
PF02113
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Beta-lactamase enzyme family
Beta-lactamase
D-Ala-D-Ala carboxypeptidase 3 (S13) family
1.40E-54
1.30E-06
7.10E-05
WP_032759562.1 53100 53529 + 142PF01243Putative_PNPOxPyridoxamine 5'-phosphate oxidase1.20E-09
WP_031125350.1 53858 53603 - 84NO PFAM MATCH---
WP_032759563.1 54172 56383 + 736PF13245
PF00580
PF01443
PF13604
PF13538
AAA_19
UvrD-helicase
Viral_helicase1
AAA_30
UvrD_C_2
AAA domain
UvrD/REP helicase N-terminal domain
Viral (Superfamily 1) RNA helicase
AAA domain
UvrD-like helicase C-terminal domain
1.70E-13
4.20E-10
5.80E-08
2.00E-06
2.20E-06
WP_015606379.1 56544 57429 + 294PF01380SISSIS domain1.30E-10

Results for WP_011976716.1 [Methanococcus maripaludis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_169929111.1 353369 353546 + 58NO PFAM MATCH---
WP_011976709.1 353559 353829 + 89PF04066MrpF_PhaFMultiple resistance and pH regulation protein F (MrpF / PhaF)3.50E-05
WP_011976710.1 354510 353862 - 215PF01936NYNNYN domain5.40E-25
WP_011976711.1 355377 354582 - 264PF01975SurESurvival protein SurE1.40E-52
WP_011976712.1 355807 356617 + 269PF13412
PF13545
PF12802
HTH_24
HTH_Crp_2
MarR_2
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
MarR family
1.10E-11
1.40E-04
1.70E-04
WP_011976713.1 357531 356649 - 293PF02754CCGCysteine-rich domain6.90E-38
WP_011976714.1 358120 357565 - 184PF13183
PF13237
PF13187
PF13534
PF12838
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_7
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.50E-10
1.80E-09
5.50E-09
8.20E-09
4.60E-06
WP_011976715.1 358251 358557 + 101PF02594DUF167Uncharacterised ACR, YggU family COG18722.70E-20
WP_011976716.1 358580 359783 + 400PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.90E-77
WP_011976717.1 359817 360786 + 322PF08349
PF04463
DUF1722
2-thiour_desulf
Protein of unknown function (DUF1722)
2-thiouracil desulfurase
7.60E-36
3.10E-32
WP_011976718.1 361011 362463 + 483PF07992
PF01266
PF03486
PF01134
PF13738
Pyr_redox_2
DAO
HI0933_like
GIDA
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Glucose inhibited division protein A
Pyridine nucleotide-disulphide oxidoreductase
1.10E-18
1.50E-11
6.80E-11
3.60E-09
6.70E-08
WP_011976719.1 362473 363904 + 476PF01406
PF09334
PF09190
PF01921
PF00133
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1f
tRNA-synt_1
tRNA synthetases class I (C) catalytic domain
tRNA synthetases class I (M)
DALR domain
tRNA synthetases class I (K)
tRNA synthetases class I (I, L, M and V)
3.10E-136
3.00E-18
5.20E-11
7.60E-09
2.60E-07
WP_220127139.1 363950 364559 + 202PF01205
PF09186
UPF0029
DUF1949
Uncharacterized protein family UPF0029
Domain of unknown function (DUF1949)
3.30E-29
8.60E-11
WP_011976721.1 364592 366437 + 614PF05362Lon_CLon protease (S16) C-terminal proteolytic domain8.10E-11
WP_011976722.1 366505 368050 + 514PF00682
PF08502
HMGL-like
LeuA_dimer
HMGL-like
LeuA allosteric (dimerisation) domain
2.70E-92
8.90E-32
WP_011976723.1 368717 368153 - 187PF01928CYTHCYTH domain3.50E-34
WP_011976724.1 369148 368713 - 144PF02082
PF13291
PF01022
PF03444
PF08279
Rrf2
ACT_4
HTH_5
HrcA_DNA-bdg
HTH_11
Iron-dependent Transcriptional regulator
ACT domain
Bacterial regulatory protein, arsR family
Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HTH domain
1.00E-07
5.90E-05
7.70E-05
7.00E-04
9.90E-04

Results for WP_011171000.1 [Methanococcus maripaludis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013999491.1 286457 286634 + 58NO PFAM MATCH---
WP_011170993.1 286647 286917 + 89PF04066MrpF_PhaFMultiple resistance and pH regulation protein F (MrpF / PhaF)3.50E-05
WP_181507781.1 287600 286952 - 215PF01936NYNNYN domain8.90E-25
WP_011170995.1 288471 287676 - 264PF01975SurESurvival protein SurE3.00E-53
WP_013999493.1 288804 289599 + 264PF13412
PF13545
HTH_24
HTH_Crp_2
Winged helix-turn-helix DNA-binding
Crp-like helix-turn-helix domain
2.60E-13
1.10E-04
WP_104838517.1 290528 289646 - 293PF02754CCGCysteine-rich domain1.20E-38
WP_013999495.1 291118 290563 - 184PF13183
PF13237
PF13187
PF13534
PF12838
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_7
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4.40E-10
1.80E-09
5.40E-09
8.00E-09
4.70E-06
WP_119721044.1 291249 291555 + 101PF02594DUF167Uncharacterised ACR, YggU family COG18728.30E-21
WP_011171000.1 291577 292780 + 400PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.00E-78
WP_183545849.1 292848 293817 + 322PF08349
PF04463
DUF1722
2-thiour_desulf
Protein of unknown function (DUF1722)
2-thiouracil desulfurase
1.90E-35
8.50E-33
WP_183545851.1 294041 295493 + 483PF07992
PF01266
PF03486
PF01134
PF13738
Pyr_redox_2
DAO
HI0933_like
GIDA
Pyr_redox_3
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Glucose inhibited division protein A
Pyridine nucleotide-disulphide oxidoreductase
1.00E-18
1.30E-11
7.70E-11
3.30E-09
1.50E-08
WP_183545853.1 295503 296934 + 476PF01406
PF09334
PF09190
PF00133
PF01921
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1
tRNA-synt_1f
tRNA synthetases class I (C) catalytic domain
tRNA synthetases class I (M)
DALR domain
tRNA synthetases class I (I, L, M and V)
tRNA synthetases class I (K)
1.50E-136
6.20E-18
8.70E-11
1.30E-07
1.70E-07
WP_183545855.1 296949 297558 + 202PF01205
PF09186
UPF0029
DUF1949
Uncharacterized protein family UPF0029
Domain of unknown function (DUF1949)
4.10E-29
3.30E-10
WP_183545857.1 297588 299430 + 613PF05362Lon_CLon protease (S16) C-terminal proteolytic domain7.50E-11
WP_011171007.1 299513 301058 + 514PF00682
PF08502
HMGL-like
LeuA_dimer
HMGL-like
LeuA allosteric (dimerisation) domain
6.40E-92
2.10E-31
WP_183545859.1 301753 301189 - 187PF01928CYTHCYTH domain7.90E-34
WP_011171009.1 302184 301749 - 144PF02082
PF01022
PF13291
PF03444
PF08279
Rrf2
HTH_5
ACT_4
HrcA_DNA-bdg
HTH_11
Iron-dependent Transcriptional regulator
Bacterial regulatory protein, arsR family
ACT domain
Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HTH domain
3.80E-08
2.50E-05
5.70E-05
2.30E-04
2.60E-04

Results for WP_031178282.1 [Streptomyces sp. PLM4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_129845141.1 4456627 4457596 + 322NO PFAM MATCH---
WP_248495697.1 4458225 4457592 - 210PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)3.10E-37
WP_146581257.1 4458401 4459169 + 255PF05630NPP1Necrosis inducing protein (NPP1)3.30E-63
WP_248495699.1 4459782 4459209 - 190PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
1.10E-18
1.90E-06
WP_248496833.1 4459900 4460452 + 183PF13977
PF00440
PF16859
TetR_C_6
TetR_N
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
6.90E-22
9.40E-10
9.80E-04
WP_248495701.1 4462064 4460471 - 530PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
5.50E-50
2.00E-11
1.10E-10
WP_003950315.1 4462539 4462773 + 77NO PFAM MATCH---
WP_248495703.1 4462781 4464668 + 628PF03704
PF13191
PF00486
PF00931
PF05729
BTAD
AAA_16
Trans_reg_C
NB-ARC
NACHT
Bacterial transcriptional activator domain
AAA ATPase domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
NACHT domain
1.60E-38
1.40E-09
3.20E-08
1.20E-06
7.40E-04
WP_031178282.1 4464674 4466897 + 740NO PFAM MATCH---
WP_248495705.1 4466886 4468839 + 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-81
WP_127453549.1 4468891 4470499 + 535PF00881NitroreductaseNitroreductase family2.10E-18
WP_248495707.1 4470495 4473261 + 921PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.60E-46
WP_003950320.1 4473257 4474325 + 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-96
WP_248495709.1 4474321 4475449 + 375PF02163Peptidase_M50Peptidase family M505.10E-04
WP_003950322.1 4475500 4476448 + 315PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_003950323.1 4476493 4477249 + 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.00E-29
1.40E-21
9.30E-06
WP_248495712.1 4477349 4479359 + 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.70E-77

Results for WP_026246031.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_008410237.1 [Streptomyces albidoflavus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_267767078.1 4419900 4422132 + 743NO PFAM MATCH---
WP_031178281.1 4422121 4424074 + 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-81
WP_010643007.1 4424126 4425732 + 535INFERRED GENE---
WP_252933053.1 4425758 4428494 + 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.90E-45
WP_008409260.1 4428490 4429558 + 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-96
WP_031178278.1 4429554 4430682 + 375PF02163Peptidase_M50Peptidase family M505.00E-04
WP_003950322.1 4430733 4431681 + 315PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_003950323.1 4431725 4432481 + 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.00E-29
1.40E-21
9.30E-06
WP_008410237.1 4432581 4434591 + 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-76
WP_026048345.1 4434851 4434674 - 58NO PFAM MATCH---
WP_018895323.1 4435051 4436335 + 428INFERRED GENE---
WP_008410241.1 4436331 4436592 + 86NO PFAM MATCH---
WP_008410243.1 4437195 4436580 - 204PF13977
PF00440
PF17940
PF00356
TetR_C_6
TetR_N
TetR_C_31
LacI
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, lacI family
1.30E-23
7.40E-10
4.20E-05
5.30E-04
WP_008410245.1 4437364 4438783 + 472PF01425AmidaseAmidase3.70E-95
WP_234364554.1 4439789 4438784 - 334PF00196GerEBacterial regulatory proteins, luxR family1.60E-05
WP_003950331.1 4440219 4443753 + 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
2.20E-31
4.00E-25
5.70E-23
4.80E-17
2.90E-16
WP_015507246.1 4444119 4443777 - 113NO PFAM MATCH---

Results for WP_017535510.1 [Nocardiopsis alba] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017535517.1 165742 165019 - 240PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
3.40E-41
3.40E-12
WP_234305806.1 166042 167380 + 445PF00202Aminotran_3Aminotransferase class-III4.10E-92
WP_017535515.1 167376 168555 + 392PF00465
PF13685
Fe-ADH
Fe-ADH_2
Iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase
1.50E-54
5.90E-10
WP_014913393.1 169971 168612 - 452PF00881NitroreductaseNitroreductase family8.40E-10
WP_017535514.1 171056 169967 - 362PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.00E-33
WP_017535513.1 171976 171052 - 307PF14028
PF17920
Lant_dehydr_C
TetR_C_16
Lantibiotic biosynthesis dehydratase C-term
Tetracyclin repressor-like, C-terminal domain
9.80E-53
7.00E-04
WP_017535512.1 174489 171972 - 838PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.50E-21
WP_017535511.1 176144 174485 - 552PF00881NitroreductaseNitroreductase family9.50E-20
WP_017535510.1 178012 176140 - 623PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-79
WP_017535509.1 179817 178008 - 602PF13241NAD_binding_7Putative NAD(P)-binding9.60E-06
WP_014909974.1 180102 179889 - 70NO PFAM MATCH---
WP_017535508.1 180576 180360 - 71NO PFAM MATCH---
WP_017535507.1 181017 180801 - 71NO PFAM MATCH---
WP_014908883.1 181558 181225 - 110PF10611DUF2469Protein of unknown function (DUF2469)5.70E-51
WP_017535506.1 182675 181805 - 289PF10502Peptidase_S26Signal peptidase, peptidase S262.10E-45
WP_014908393.1 183106 182746 - 119PF01245Ribosomal_L19Ribosomal protein L198.30E-50
WP_042282767.1 184135 183343 - 263PF01746tRNA_m1G_MTtRNA (Guanine-1)-methyltransferase1.90E-67

Results for WP_051422246.1 back to top

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Couldn't process WP_051422246.1 Genbank filestream. May be corrupt.

Results for WP_018560190.1 [Streptomyces sp. SID8377] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_202470789.1 434 1199 + 254PF00561
PF12697
PF12146
PF00756
PF02230
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Esterase
Abhydrolase_2
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
Putative esterase
Phospholipase/Carboxylesterase
9.10E-22
1.40E-17
1.50E-17
8.10E-07
1.40E-06
WP_076612357.1 1262 1373 + 37INFERRED GENE---
WP_018560184.1 2400 1554 - 281PF12679ABC2_membrane_2ABC-2 family transporter protein1.20E-04
WP_018560185.1 3347 2396 - 316PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
1.20E-24
7.60E-13
5.60E-06
WP_018560186.1 4575 3339 - 411PF11667DUF3267Putative zincin peptidase5.40E-04
WP_018560187.1 5636 4571 - 354PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.30E-80
WP_018560188.1 8254 5635 - 872PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus9.20E-51
WP_063741046.1 9922 8371 - 516PF00881NitroreductaseNitroreductase family3.80E-12
WP_018560190.1 11999 10067 - 643PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-77
WP_018560191.1 12349 12175 - 57NO PFAM MATCH---
WP_018560192.1 14362 12448 - 637PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-09
WP_158689767.1 15474 15207 - 88NO PFAM MATCH---
WP_237497769.1 16234 15460 - 257PF13359DDE_Tnp_4DDE superfamily endonuclease1.00E-06
WP_018560195.1 16621 16981 + 119PF07045DUF1330Domain of unknown function (DUF1330)1.40E-21
WP_018524362.1 17475 17601 + 42INFERRED GENE---
WP_237497771.1 18521 17699 - 273PF17765
PF13560
PF01381
MLTR_LBD
HTH_31
HTH_3
MmyB-like transcription regulator ligand binding domain
Helix-turn-helix domain
Helix-turn-helix
1.30E-51
3.70E-17
9.30E-06
WP_018560199.1 18684 19539 + 284PF13460
PF01370
PF01073
PF07993
PF04321
NAD_binding_10
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD(P)H-binding
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
Male sterility protein
RmlD substrate binding domain
1.30E-19
7.70E-18
3.40E-15
8.80E-11
9.60E-11

Results for WP_018560192.1 [Streptomyces sp. SID8377] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018560184.1 2400 1554 - 281PF12679ABC2_membrane_2ABC-2 family transporter protein1.20E-04
WP_018560185.1 3347 2396 - 316PF00005
PF13304
PF13732
ABC_tran
AAA_21
DUF4162
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
Domain of unknown function (DUF4162)
1.20E-24
7.60E-13
5.60E-06
WP_018560186.1 4575 3339 - 411PF11667DUF3267Putative zincin peptidase5.40E-04
WP_018560187.1 5636 4571 - 354PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.30E-80
WP_018560188.1 8254 5635 - 872PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus9.20E-51
WP_063741046.1 9922 8371 - 516PF00881NitroreductaseNitroreductase family3.80E-12
WP_018560190.1 11999 10067 - 643PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.30E-77
WP_018560191.1 12349 12175 - 57NO PFAM MATCH---
WP_018560192.1 14362 12448 - 637PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-09
WP_158689767.1 15474 15207 - 88NO PFAM MATCH---
WP_237497769.1 16234 15460 - 257PF13359DDE_Tnp_4DDE superfamily endonuclease1.00E-06
WP_018560195.1 16621 16981 + 119PF07045DUF1330Domain of unknown function (DUF1330)1.40E-21
WP_018524362.1 17475 17601 + 42INFERRED GENE---
WP_237497771.1 18521 17699 - 273PF17765
PF13560
PF01381
MLTR_LBD
HTH_31
HTH_3
MmyB-like transcription regulator ligand binding domain
Helix-turn-helix domain
Helix-turn-helix
1.30E-51
3.70E-17
9.30E-06
WP_018560199.1 18684 19539 + 284PF13460
PF01370
PF01073
PF07993
PF04321
NAD_binding_10
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD(P)H-binding
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
Male sterility protein
RmlD substrate binding domain
1.30E-19
7.70E-18
3.40E-15
8.80E-11
9.60E-11
WP_202470791.1 20389 20023 - 121NO PFAM MATCH---
WP_018560201.1 20630 20396 - 77PF05534HicBHicB family2.30E-04

Results for WP_037748934.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_028439967.1 [Streptomyces sp. SID4912] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028439960.1 480688 481318 + 209PF02469FasciclinFasciclin domain9.40E-32
WP_003954413.1 481440 482310 + 290INFERRED GENE---
WP_051422111.1 482634 483300 + 221NO PFAM MATCH---
WP_141709781.1 484065 483534 - 176NO PFAM MATCH---
WP_028439963.1 484475 484061 - 137NO PFAM MATCH---
WP_028439964.1 484837 485722 + 294PF19054
PF13560
PF12844
PF13443
DUF5753
HTH_31
HTH_19
HTH_26
Domain of unknown function (DUF5753)
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
1.70E-57
1.90E-14
2.50E-06
6.80E-04
WP_028439965.1 485728 485944 + 71PF04149DUF397Domain of unknown function (DUF397)3.90E-22
WP_028439966.1 487114 486292 - 273PF01636
PF01633
APH
Choline_kinase
Phosphotransferase enzyme family
Choline/ethanolamine kinase
8.60E-30
4.00E-04
WP_028439967.1 487669 489838 + 722PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-58
WP_028439968.1 489847 491131 + 427PF07690
PF12832
MFS_1
MFS_1_like
Major Facilitator Superfamily
MFS_1 like family
3.90E-35
1.20E-06
WP_028439969.1 491123 491657 + 177PF13673
PF13508
Acetyltransf_10
Acetyltransf_7
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
1.70E-05
5.60E-05
WP_028439970.1 493459 491764 - 564PF05960DUF885Bacterial protein of unknown function (DUF885)4.10E-146
WP_051730066.1 494336 493562 - 257PF12773
PF13240
DZR
zinc_ribbon_2
Double zinc ribbon
zinc-ribbon domain
4.10E-05
6.60E-05
WP_028439972.1 495333 494766 - 188PF09684Tail_P2_IPhage tail protein (Tail_P2_I)3.20E-15
WP_028439973.1 497291 495329 - 653PF04865Baseplate_JBaseplate J-like protein3.40E-16
WP_237521248.1 497674 497290 - 127PF04965GPW_gp25Baseplate wedge protein gp251.50E-25
WP_028439975.1 498030 497709 - 106PF05488PAAR_motifPAAR motif2.40E-17

Results for WP_028441277.1 [Streptomyces sp. DpondAA-D4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028441284.1 198788 201203 + 804PF02836
PF00703
PF02837
Glyco_hydro_2_C
Glyco_hydro_2
Glyco_hydro_2_N
Glycosyl hydrolases family 2, TIM barrel domain
Glycosyl hydrolases family 2
Glycosyl hydrolases family 2, sugar binding domain
6.70E-05
1.60E-04
3.90E-04
WP_014628049.1 201769 202920 + 383INFERRED GENE---
WP_028441283.1 202966 203539 + 190PF00575S1S1 RNA binding domain3.70E-30
WP_028441282.1 203657 203996 + 112PF03091CutA1CutA1 divalent ion tolerance protein1.20E-21
WP_028441281.1 205077 204219 - 285NO PFAM MATCH---
WP_028441280.1 205417 205063 - 117NO PFAM MATCH---
WP_028441279.1 206501 205487 - 337PF07479
PF01210
PF20618
PF02558
PF03807
NAD_Gly3P_dh_C
NAD_Gly3P_dh_N
GPD_NAD_C_bact
ApbA
F420_oxidored
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Bacterial GPD, NAD-dependent C-terminal
Ketopantoate reductase PanE/ApbA
NADP oxidoreductase coenzyme F420-dependent
3.90E-47
8.80E-46
5.00E-22
2.10E-07
1.60E-05
WP_028441278.1 207340 206497 - 280PF08241
PF13649
PF13847
PF08242
PF13489
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
1.80E-12
2.70E-12
6.70E-09
2.90E-07
1.30E-06
WP_028441277.1 208485 207336 - 382PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-54
WP_256083664.1 209597 208481 - 371PF07812TfuATfuA-like protein1.20E-39
WP_256083665.1 210409 211408 + 332NO PFAM MATCH---
WP_028441274.1 211811 212264 + 150NO PFAM MATCH---
WP_028441273.1 212263 214360 + 698NO PFAM MATCH---
WP_028441272.1 214356 214896 + 179NO PFAM MATCH---
WP_028441271.1 215093 215954 + 286PF12811
PF01027
BaxI_1
Bax1-I
Bax inhibitor 1 like
Inhibitor of apoptosis-promoting Bax1
6.70E-83
1.80E-20
WP_028441270.1 216180 216501 + 106NO PFAM MATCH---
WP_176712220.1 217384 216538 - 281NO PFAM MATCH---

Results for WP_028440958.1 [Streptomyces sp. SID4912] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028440951.1 116891 114893 - 665PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.70E-79
WP_028440952.1 117643 116887 - 251PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
1.80E-27
2.30E-19
WP_028440953.1 118635 117639 - 331PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.10E-28
1.40E-16
2.10E-07
4.90E-05
WP_028440954.1 119815 118678 - 378PF02163Peptidase_M50Peptidase family M503.20E-05
WP_237532961.1 121071 119976 - 364PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.50E-83
WP_028440955.1 124019 121244 - 924PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.20E-41
WP_028440956.1 125663 124034 - 542PF00881NitroreductaseNitroreductase family2.70E-18
WP_237521023.1 127654 125707 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.70E-79
WP_028440958.1 129947 127643 - 767PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-13
WP_237532954.1 132006 130107 - 632PF03704
PF00486
PF00931
BTAD
Trans_reg_C
NB-ARC
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
1.60E-34
1.40E-07
8.80E-06
WP_028440960.1 132309 132102 - 68NO PFAM MATCH---
WP_028440961.1 132593 133601 + 335PF00196
PF13384
PF13551
GerE
HTH_23
HTH_29
Bacterial regulatory proteins, luxR family
Homeodomain-like domain
Winged helix-turn helix
9.60E-08
1.80E-07
6.40E-04
WP_237532962.1 137158 133711 - 1148PF04389
PF01447
PF02868
PF07504
PF01546
Peptidase_M28
Peptidase_M4
Peptidase_M4_C
FTP
Peptidase_M20
Peptidase family M28
Thermolysin metallopeptidase, catalytic domain
Thermolysin metallopeptidase, alpha-helical domain
Fungalysin/Thermolysin Propeptide Motif
Peptidase family M20/M25/M40
5.90E-40
7.80E-24
9.20E-23
2.80E-05
2.20E-04
WP_028440963.1 138988 137494 - 497PF13560
PF12844
PF01381
HTH_31
HTH_19
HTH_3
Helix-turn-helix domain
Helix-turn-helix domain
Helix-turn-helix
2.30E-11
6.60E-07
1.10E-06
WP_202505067.1 139330 140866 + 511PF02397Bac_transfBacterial sugar transferase8.20E-66
WP_028440965.1 141899 140918 - 326PF01370
PF16363
PF04321
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
RmlD substrate binding domain
2.60E-73
2.00E-21
6.40E-10
WP_028440966.1 142013 143027 + 337PF16363
PF01370
PF04321
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
GDP-mannose 4,6 dehydratase
NAD dependent epimerase/dehydratase family
RmlD substrate binding domain
1.20E-133
3.30E-69
8.60E-07

Results for WP_005478952.1 [Streptomyces bottropensis ATCC 25435] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005478940.1 7141972 7140388 - 527PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
4.30E-95
1.30E-07
WP_028796953.1 7143027 7141968 - 352PF08541
PF08545
PF00108
ACP_syn_III_C
ACP_syn_III
Thiolase_N
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
Thiolase, N-terminal domain
2.30E-12
1.40E-07
2.70E-04
WP_020115382.1 7143247 7144804 + 518PF07690
PF00083
MFS_1
Sugar_tr
Major Facilitator Superfamily
Sugar (and other) transporter
7.40E-52
1.10E-05
WP_020115383.1 7144943 7145471 + 175PF10604
PF03364
Polyketide_cyc2
Polyketide_cyc
Polyketide cyclase / dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport
1.40E-14
4.90E-06
WP_005478945.1 7145467 7145848 + 126PF10823DUF2568Protein of unknown function (DUF2568)9.30E-19
WP_237547323.1 7146761 7145954 - 268PF00975
PF12697
PF12146
Thioesterase
Abhydrolase_6
Hydrolase_4
Thioesterase domain
Alpha/beta hydrolase family
Serine aminopeptidase, S33
1.70E-30
3.90E-11
5.60E-05
WP_005478947.1 7147743 7146906 - 278PF03704
PF00486
BTAD
Trans_reg_C
Bacterial transcriptional activator domain
Transcriptional regulatory protein, C terminal
7.20E-46
5.50E-12
WP_005478950.1 7148039 7148366 + 108NO PFAM MATCH---
WP_005478952.1 7148362 7150738 + 791PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.30E-99
WP_005478954.1 7150791 7152417 + 541PF00881NitroreductaseNitroreductase family4.60E-16
WP_005478955.1 7152496 7153750 + 417PF07730HisKA_3Histidine kinase1.30E-15
WP_005478956.1 7154488 7153882 - 201PF00196
PF00072
PF08281
GerE
Response_reg
Sigma70_r4_2
Bacterial regulatory proteins, luxR family
Response regulator receiver domain
Sigma-70, region 4
1.20E-17
2.20E-16
5.70E-04
WP_005478957.1 7155618 7154586 - 343PF03756AfsAA-factor biosynthesis hotdog domain1.00E-41
WP_005478958.1 7157316 7155669 - 548PF01494
PF13450
PF00070
PF07992
FAD_binding_3
NAD_binding_8
Pyr_redox
Pyr_redox_2
FAD binding domain
NAD(P)-binding Rossmann-like domain
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
5.90E-64
2.80E-05
3.80E-05
3.40E-04
WP_237547324.1 7158059 7157312 - 248PF13419
PF00702
PF13242
HAD_2
Hydrolase
Hydrolase_like
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
5.30E-14
1.70E-12
9.50E-06
WP_005478964.1 7160938 7158586 - 783PF03176MMPLMMPL family4.00E-80
WP_020115384.1 7162075 7161043 - 343PF08450SGLSMP-30/Gluconolactonase/LRE-like region1.60E-09

Results for WP_005486705.1 [Streptomyces sp. SID5476] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028797007.1 212271 211668 - 200PF01725Ham1p_likeHam1 family1.80E-61
WP_028797008.1 212704 212305 - 132PF04012
PF07889
PF06009
PF12795
PspA_IM30
DUF1664
Laminin_II
MscS_porin
PspA/IM30 family
Protein of unknown function (DUF1664)
Laminin Domain II
Mechanosensitive ion channel porin domain
2.20E-05
2.60E-04
3.50E-04
5.00E-04
WP_005486689.1 213597 212859 - 245PF01138
PF03725
RNase_PH
RNase_PH_C
3' exoribonuclease family, domain 1
3' exoribonuclease family, domain 2
1.70E-25
6.20E-10
WP_020115552.1 213915 213681 - 77PF00367PTS_EIIBphosphotransferase system, EIIB2.20E-13
WP_005486693.1 215322 214035 - 428PF07690
PF05977
PF00083
MFS_1
MFS_3
Sugar_tr
Major Facilitator Superfamily
Transmembrane secretion effector
Sugar (and other) transporter
2.50E-27
3.40E-14
4.60E-06
WP_202500550.1 216683 215855 - 275PF04072LCMLeucine carboxyl methyltransferase1.80E-20
WP_005486699.1 217122 219015 + 630PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.30E-07
1.50E-05
WP_005486703.1 219161 219296 + 44NO PFAM MATCH---
WP_005486705.1 219359 220592 + 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-08
WP_020115555.1 220479 221871 + 463PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-34
WP_202500551.1 221903 223880 + 658PF04055Radical_SAMRadical SAM superfamily1.10E-07
WP_202500552.1 223887 224736 + 282PF00561
PF12146
Abhydrolase_1
Hydrolase_4
alpha/beta hydrolase fold
Serine aminopeptidase, S33
3.20E-10
4.00E-06
WP_005486711.1 224732 226169 + 478PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
2.70E-07
2.60E-05
WP_020115557.1 226158 227391 + 410PF00067p450Cytochrome P4503.20E-13
WP_005486715.1 227398 229432 + 677PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.30E-08
2.40E-05
WP_028797010.1 229573 230128 + 184PF09860DUF2087Uncharacterized protein conserved in bacteria (DUF2087)6.30E-22
WP_005486722.1 230132 231647 + 504PF00883
PF02789
Peptidase_M17
Peptidase_M17_N
Cytosol aminopeptidase family, catalytic domain
Cytosol aminopeptidase family, N-terminal domain
9.30E-100
4.50E-14

Results for WP_020115555.1 [Streptomyces sp. SID5476] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028797008.1 212704 212305 - 132PF04012
PF07889
PF06009
PF12795
PspA_IM30
DUF1664
Laminin_II
MscS_porin
PspA/IM30 family
Protein of unknown function (DUF1664)
Laminin Domain II
Mechanosensitive ion channel porin domain
2.20E-05
2.60E-04
3.50E-04
5.00E-04
WP_005486689.1 213597 212859 - 245PF01138
PF03725
RNase_PH
RNase_PH_C
3' exoribonuclease family, domain 1
3' exoribonuclease family, domain 2
1.70E-25
6.20E-10
WP_020115552.1 213915 213681 - 77PF00367PTS_EIIBphosphotransferase system, EIIB2.20E-13
WP_005486693.1 215322 214035 - 428PF07690
PF05977
PF00083
MFS_1
MFS_3
Sugar_tr
Major Facilitator Superfamily
Transmembrane secretion effector
Sugar (and other) transporter
2.50E-27
3.40E-14
4.60E-06
WP_202500550.1 216683 215855 - 275PF04072LCMLeucine carboxyl methyltransferase1.80E-20
WP_005486699.1 217122 219015 + 630PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.30E-07
1.50E-05
WP_005486703.1 219161 219296 + 44NO PFAM MATCH---
WP_005486705.1 219359 220592 + 410PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.70E-08
WP_020115555.1 220479 221871 + 463PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.90E-34
WP_202500551.1 221903 223880 + 658PF04055Radical_SAMRadical SAM superfamily1.10E-07
WP_202500552.1 223887 224736 + 282PF00561
PF12146
Abhydrolase_1
Hydrolase_4
alpha/beta hydrolase fold
Serine aminopeptidase, S33
3.20E-10
4.00E-06
WP_005486711.1 224732 226169 + 478PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
2.70E-07
2.60E-05
WP_020115557.1 226158 227391 + 410PF00067p450Cytochrome P4503.20E-13
WP_005486715.1 227398 229432 + 677PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.30E-08
2.40E-05
WP_028797010.1 229573 230128 + 184PF09860DUF2087Uncharacterized protein conserved in bacteria (DUF2087)6.30E-22
WP_005486722.1 230132 231647 + 504PF00883
PF02789
Peptidase_M17
Peptidase_M17_N
Cytosol aminopeptidase family, catalytic domain
Cytosol aminopeptidase family, N-terminal domain
9.30E-100
4.50E-14
WP_028797011.1 231736 232990 + 417PF02378PTS_EIICPhosphotransferase system, EIIC3.20E-70

Results for WP_007451546.1 [Streptomyces sp. SID5477] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007451529.1 17071 16888 - 60NO PFAM MATCH---
WP_007451531.1 17302 17122 - 59NO PFAM MATCH---
WP_202482811.1 17490 17343 - 48NO PFAM MATCH---
WP_007451535.1 17735 17561 - 57NO PFAM MATCH---
WP_007451537.1 17955 17769 - 61NO PFAM MATCH---
WP_007451539.1 18766 17992 - 257PF00881NitroreductaseNitroreductase family1.60E-10
WP_161337089.1 20322 18762 - 519PF00881NitroreductaseNitroreductase family4.80E-04
WP_007451543.1 21056 20420 - 211NO PFAM MATCH---
WP_007451546.1 22420 21064 - 451PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.60E-63
WP_007451559.1 23349 24243 + 297PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.40E-18
2.80E-15
2.20E-06
WP_007451550.1 25455 24258 - 398PF01979
PF07969
Amidohydro_1
Amidohydro_3
Amidohydrolase family
Amidohydrolase family
1.20E-40
6.10E-19
WP_237557223.1 26555 25481 - 357PF20182DUF6545Family of unknown function (DUF6545)2.80E-23
WP_237557224.1 26938 26614 - 107NO PFAM MATCH---
WP_042826545.1 27906 28791 + 294PF02481
PF18306
DNA_processg_A
LDcluster4
DNA recombination-mediator protein A
SLOG cluster4 family
3.70E-58
5.70E-05
WP_237557225.1 28991 29555 + 187NO PFAM MATCH---
WP_007451506.1 30596 29769 - 274PF00775Dioxygenase_CDioxygenase6.30E-19

Results for WP_023417526.1 [Streptomyces sp. GBA 94-10 4N24] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_023421885.1 2566776 2567109 + 110NO PFAM MATCH---
WP_023421886.1 2570668 2567134 - 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
6.80E-32
1.00E-24
1.60E-23
8.50E-17
7.50E-16
WP_023421887.1 2571098 2572103 + 334PF00196GerEBacterial regulatory proteins, luxR family1.70E-05
WP_023421888.1 2573523 2572104 - 472PF01425AmidaseAmidase1.30E-94
WP_023417523.1 2573656 2574271 + 204PF13977
PF00440
PF17940
TetR_C_6
TetR_N
TetR_C_31
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
2.90E-22
7.00E-09
2.80E-04
WP_023417524.1 2574520 2574259 - 86NO PFAM MATCH---
WP_023421889.1 2575815 2574516 - 432PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
4.70E-17
9.50E-11
WP_026048345.1 2576015 2576192 + 58NO PFAM MATCH---
WP_023417526.1 2578285 2576275 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.60E-76
WP_023417527.1 2579141 2578385 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
8.60E-29
1.90E-21
3.10E-05
WP_023421891.1 2580132 2579190 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_023421892.1 2581301 2580182 - 372PF02163Peptidase_M50Peptidase family M506.70E-04
WP_023421893.1 2582365 2581297 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term9.80E-96
WP_234025347.1 2585097 2582361 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.80E-46
WP_023421895.1 2586731 2585123 - 535PF00881NitroreductaseNitroreductase family5.60E-18
WP_023421896.1 2588737 2586784 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.50E-81
WP_023421897.1 2590949 2588726 - 740NO PFAM MATCH---

Results for WP_024775237.1 [Aliarcobacter cibarius] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_024775239.1 127 967 + 279PF01035
PF00165
PF12833
DNA_binding_1
HTH_AraC
HTH_18
6-O-methylguanine DNA methyltransferase, DNA binding domain
Bacterial regulatory helix-turn-helix proteins, AraC family
Helix-turn-helix domain
4.00E-27
1.60E-18
1.80E-14
WP_024775238.1 950 1631 + 226PF00730
PF00633
HhH-GPD
HHH
HhH-GPD superfamily base excision DNA repair protein
Helix-hairpin-helix motif
7.90E-12
1.60E-05
WP_024775237.1 1688 3293 + 534PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
9.80E-57
2.40E-07
WP_024775236.1 5069 3314 - 584PF00005
PF12848
PF13304
PF02463
PF13175
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_15
ABC transporter
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
9.00E-49
2.50E-15
1.20E-12
2.00E-10
4.90E-07
WP_024775235.1 5184 5730 + 181NO PFAM MATCH---
WP_138154269.1 6444 5751 - 230PF14790
PF14789
THDPS_N
THDPS_M
Tetrahydrodipicolinate N-succinyltransferase N-terminal
Tetrahydrodipicolinate N-succinyltransferase middle
5.20E-50
3.60E-07
WP_024775234.1 8328 6480 - 615PF00270
PF18074
PF00271
PF04851
PF18319
DEAD
PriA_C
Helicase_C
ResIII
PriA_CRR
DEAD/DEAH box helicase
Primosomal protein N C-terminal domain
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
PriA DNA helicase Cys-rich region (CRR) domain
3.00E-14
5.40E-14
1.40E-13
5.00E-12
2.30E-11
WP_228130305.1 8753 8324 - 142NO PFAM MATCH---
WP_084031349.1 8964 8754 - 69NO PFAM MATCH---
WP_024775231.1 9157 8956 - 66PF06005ZapBCell division protein ZapB4.70E-05
WP_024775230.1 9594 9174 - 139NO PFAM MATCH---

Results for WP_015507254.1 [Streptomyces albus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015507250.1 2387998 2385988 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-77
WP_003950323.1 2388854 2388098 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.00E-29
1.40E-21
9.30E-06
WP_003950322.1 2389846 2388898 - 315PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_003950321.1 2391025 2389897 - 375PF02163Peptidase_M50Peptidase family M505.00E-04
WP_003950320.1 2392089 2391021 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-96
WP_015507251.1 2394821 2392085 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.70E-46
WP_015507252.1 2396455 2394847 - 535PF00881NitroreductaseNitroreductase family1.70E-18
WP_015507253.1 2398460 2396507 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.00E-81
WP_015507254.1 2400672 2398449 - 740PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-12
WP_015507255.1 2402565 2400678 - 628PF03704
PF13191
PF00486
PF00931
PF05729
BTAD
AAA_16
Trans_reg_C
NB-ARC
NACHT
Bacterial transcriptional activator domain
AAA ATPase domain
Transcriptional regulatory protein, C terminal
NB-ARC domain
NACHT domain
1.60E-38
2.90E-10
3.20E-08
1.20E-06
7.40E-04
WP_003950315.1 2402807 2402573 - 77NO PFAM MATCH---
WP_015507256.1 2403282 2404875 + 530PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
1.40E-49
2.70E-11
5.40E-11
WP_015507257.1 2405442 2404890 - 183PF13977
PF00440
PF16859
TetR_C_6
TetR_N
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
7.90E-22
9.70E-10
1.40E-04
WP_015507258.1 2405560 2406118 + 185PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
1.10E-18
2.30E-06
WP_003950311.1 2406795 2406195 - 199NO PFAM MATCH---
WP_008412119.1 2407381 2406820 - 186NO PFAM MATCH---
WP_015507260.1 2408473 2407705 - 255PF05630NPP1Necrosis inducing protein (NPP1)3.20E-63

Results for WP_015507250.1 [Streptomyces albus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003950333.1 2376052 2376487 + 144PF13581HATPase_c_2Histidine kinase-like ATPase domain7.10E-12
WP_003950331.1 2380383 2376849 - 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
2.20E-31
4.00E-25
5.70E-23
4.80E-17
2.90E-16
WP_015507247.1 2380813 2381818 + 334PF00196GerEBacterial regulatory proteins, luxR family1.60E-05
WP_018895321.1 2381819 2383239 + 473INFERRED GENE---
WP_003950328.1 2383381 2383996 + 204PF13977
PF00440
PF17940
PF00356
TetR_C_6
TetR_N
TetR_C_31
LacI
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, lacI family
1.40E-22
7.20E-10
6.70E-05
9.10E-04
WP_010642996.1 2384245 2383984 - 86NO PFAM MATCH---
WP_015507249.1 2385528 2384241 - 428PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
6.60E-18
1.50E-10
WP_026048345.1 2385728 2385905 + 58NO PFAM MATCH---
WP_015507250.1 2387998 2385988 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.50E-77
WP_003950323.1 2388854 2388098 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.00E-29
1.40E-21
9.30E-06
WP_003950322.1 2389846 2388898 - 315PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.30E-28
1.30E-14
1.70E-05
1.40E-04
WP_003950321.1 2391025 2389897 - 375PF02163Peptidase_M50Peptidase family M505.00E-04
WP_003950320.1 2392089 2391021 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term2.60E-96
WP_015507251.1 2394821 2392085 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus2.70E-46
WP_015507252.1 2396455 2394847 - 535PF00881NitroreductaseNitroreductase family1.70E-18
WP_015507253.1 2398460 2396507 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.00E-81
WP_015507254.1 2400672 2398449 - 740PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.80E-12

Results for WP_015507666.1 [Streptomyces albidoflavus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003948918.1 3825243 3825615 + 123NO PFAM MATCH---
WP_003948917.1 3825611 3826553 + 313PF00005
PF13304
PF13401
ABC_tran
AAA_21
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
1.70E-28
2.50E-14
1.10E-04
WP_003948916.1 3826549 3827347 + 265PF12698
PF12730
PF01061
ABC2_membrane_3
ABC2_membrane_4
ABC2_membrane
ABC-2 family transporter protein
ABC-2 family transporter protein
ABC-2 type transporter
5.50E-05
3.80E-04
4.70E-04
WP_008405005.1 3827686 3827410 - 91PF03621MbtHMbtH-like protein7.00E-30
WP_003948914.1 3828653 3827843 - 269PF12697
PF00561
PF12146
PF08386
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Abhydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
TAP-like protein
5.70E-20
8.30E-17
7.00E-10
1.30E-04
WP_003948913.1 3830117 3828689 - 475PF00171AldedhAldehyde dehydrogenase family3.10E-28
WP_010645181.1 3831013 3831961 + 315PF12840
PF01022
PF12802
PF13545
PF13412
HTH_20
HTH_5
MarR_2
HTH_Crp_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Crp-like helix-turn-helix domain
Winged helix-turn-helix DNA-binding
3.20E-08
1.80E-06
3.00E-05
2.90E-04
3.00E-04
WP_008404999.1 3832195 3832372 + 58NO PFAM MATCH---
WP_015507666.1 3832368 3834660 + 763PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.60E-98
WP_015507667.1 3834806 3836069 + 420PF07730HisKA_3Histidine kinase7.60E-15
WP_003948908.1 3836111 3836723 + 203PF00072
PF00196
PF13384
PF08281
PF04545
Response_reg
GerE
HTH_23
Sigma70_r4_2
Sigma70_r4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Homeodomain-like domain
Sigma-70, region 4
Sigma-70, region 4
1.90E-19
4.40E-18
3.40E-06
5.50E-06
3.00E-05
WP_015507668.1 3837413 3836732 - 226NO PFAM MATCH---
WP_003948906.1 3839106 3837678 - 475PF03703bPH_2Bacterial PH domain7.80E-43
WP_003948905.1 3839636 3839102 - 177PF03703bPH_2Bacterial PH domain1.20E-14
WP_003948904.1 3839667 3840810 + 380PF00346Complex1_49kDaRespiratory-chain NADH dehydrogenase, 49 Kd subunit1.50E-67
WP_003948903.1 3841982 3840932 - 349PF02636Methyltransf_28Putative S-adenosyl-L-methionine-dependent methyltransferase7.90E-15
WP_003948902.1 3842159 3843365 + 401PF07730
PF02518
HisKA_3
HATPase_c
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
5.10E-22
4.20E-05

Results for WP_047414124.1 back to top

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Couldn't process WP_047414124.1 Genbank filestream. May be corrupt.

Results for WP_047414124.1 back to top

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Couldn't process WP_047414124.1 Genbank filestream. May be corrupt.

Results for WP_047359384.1 [Citrobacter braakii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049042995.1 93152 91403 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
9.80E-61
6.00E-36
1.50E-10
1.50E-05
2.60E-05
WP_049042997.1 95453 93188 - 754PF03772
PF00753
PF12706
PF13567
Competence
Lactamase_B
Lactamase_B_2
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Domain of unknown function (DUF4131)
9.10E-51
1.10E-18
3.60E-04
3.60E-04
WP_003035780.1 95944 95659 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.80E-29
5.40E-07
4.30E-04
WP_003035776.1 97778 96104 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.10E-100
7.50E-12
9.00E-07
WP_016152447.1 98575 97891 - 227PF02224
PF13189
PF00005
Cytidylate_kin
Cytidylate_kin2
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
ABC transporter
1.80E-84
2.70E-06
6.50E-04
WP_075847041.1 100092 98808 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.00E-150
WP_075847039.1 101249 100160 - 362PF00266Aminotran_5Aminotransferase class-V1.70E-70
WP_016156114.1 102154 101461 - 230PF04239DUF421Protein of unknown function (DUF421)7.00E-16
WP_047359384.1 102290 104051 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-81
1.50E-67
WP_075552824.1 104413 105313 + 299PF01226Form_Nir_transFormate/nitrite transporter3.70E-74
WP_016152441.1 105372 107655 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.90E-208
4.70E-44
WP_003035751.1 107840 108581 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-32
1.30E-18
4.50E-06
WP_047359385.1 109487 108638 - 282PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
5.00E-15
2.10E-05
WP_016152439.1 109608 109884 + 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.30E-12
WP_016156112.1 109900 111166 + 421PF03611EIIC-GATPTS system sugar-specific permease component3.10E-120
WP_049043003.1 111178 111976 + 265PF00456
PF13292
PF00676
PF02775
PF17273
Transketolase_N
DXP_synthase_N
E1_dh
TPP_enzyme_C
DUF5338
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Family of unknown function (DUF5338)
3.40E-42
6.60E-15
2.10E-07
4.00E-04
8.90E-04
WP_075847035.1 111975 112887 + 303PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
9.80E-27
3.90E-14

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Results for WP_047359384.1 [Citrobacter braakii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049042995.1 93152 91403 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
9.80E-61
6.00E-36
1.50E-10
1.50E-05
2.60E-05
WP_049042997.1 95453 93188 - 754PF03772
PF00753
PF12706
PF13567
Competence
Lactamase_B
Lactamase_B_2
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Domain of unknown function (DUF4131)
9.10E-51
1.10E-18
3.60E-04
3.60E-04
WP_003035780.1 95944 95659 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.80E-29
5.40E-07
4.30E-04
WP_003035776.1 97778 96104 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.10E-100
7.50E-12
9.00E-07
WP_016152447.1 98575 97891 - 227PF02224
PF13189
PF00005
Cytidylate_kin
Cytidylate_kin2
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
ABC transporter
1.80E-84
2.70E-06
6.50E-04
WP_075847041.1 100092 98808 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.00E-150
WP_075847039.1 101249 100160 - 362PF00266Aminotran_5Aminotransferase class-V1.70E-70
WP_016156114.1 102154 101461 - 230PF04239DUF421Protein of unknown function (DUF421)7.00E-16
WP_047359384.1 102290 104051 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-81
1.50E-67
WP_075552824.1 104413 105313 + 299PF01226Form_Nir_transFormate/nitrite transporter3.70E-74
WP_016152441.1 105372 107655 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.90E-208
4.70E-44
WP_003035751.1 107840 108581 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-32
1.30E-18
4.50E-06
WP_047359385.1 109487 108638 - 282PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
5.00E-15
2.10E-05
WP_016152439.1 109608 109884 + 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.30E-12
WP_016156112.1 109900 111166 + 421PF03611EIIC-GATPTS system sugar-specific permease component3.10E-120
WP_049043003.1 111178 111976 + 265PF00456
PF13292
PF00676
PF02775
PF17273
Transketolase_N
DXP_synthase_N
E1_dh
TPP_enzyme_C
DUF5338
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Family of unknown function (DUF5338)
3.40E-42
6.60E-15
2.10E-07
4.00E-04
8.90E-04
WP_075847035.1 111975 112887 + 303PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
9.80E-27
3.90E-14

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Results for WP_012052024.1 [Pseudomonas sp. DCB_CB] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003256034.1 64389 62643 - 581PF02028BCCTBCCT, betaine/carnitine/choline family transporter1.20E-176
WP_003256033.1 64704 65022 + 105NO PFAM MATCH---
WP_003256032.1 65030 65231 + 66PF06945DUF1289Protein of unknown function (DUF1289)1.50E-15
WP_003256031.1 65280 65922 + 213PF01810LysELysE type translocator1.30E-31
WP_003256028.1 66129 66918 + 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
3.90E-29
7.80E-05
WP_060538061.1 68331 66987 - 447PF00034
PF13442
PF09698
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
8.00E-25
4.30E-21
4.30E-04
WP_004577479.1 70605 68349 - 751PF02738
PF20256
PF01315
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
4.90E-34
1.80E-30
2.60E-04
WP_003256023.1 71060 70604 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.20E-22
3.80E-08
1.20E-05
WP_012052024.1 71329 73516 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.20E-73
2.00E-72
7.60E-08
WP_256818977.1 74601 73725 - 291PF20455DUF6708Family of unknown function (DUF6708)2.00E-06
WP_012052026.1 74603 75916 + 437INFERRED GENE---

Results for WP_033874737.1 [Pseudomonas aeruginosa] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_235584248.1 51637 52075 + 145PF13676TIR_2TIR domain2.40E-07
WP_126868885.1 52305 53220 + 304PF13676
PF08357
TIR_2
SEFIR
TIR domain
SEFIR domain
9.70E-09
6.40E-05
WP_003114920.1 54290 53909 - 126PF14263DUF4354Domain of unknown function (DUF4354)1.20E-50
WP_153274576.1 54617 54455 - 53NO PFAM MATCH---
WP_023108095.1 56003 54707 - 431PF00015
PF13426
PF08448
PF08447
PF00989
MCPsignal
PAS_9
PAS_4
PAS_3
PAS
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS domain
PAS fold
PAS fold
PAS fold
1.10E-32
8.20E-28
7.20E-27
8.40E-25
1.10E-19
WP_023435586.1 56311 56608 + 98NO PFAM MATCH---
WP_003119171.1 56654 57224 + 189PF13302
PF00583
PF13523
PF13420
Acetyltransf_3
Acetyltransf_1
Acetyltransf_8
Acetyltransf_4
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.60E-18
1.50E-06
1.50E-05
8.10E-05
WP_003111124.1 59586 57285 - 766PF01717
PF08267
Meth_synt_2
Meth_synt_1
Cobalamin-independent synthase, Catalytic domain
Cobalamin-independent synthase, N-terminal domain
3.90E-159
7.10E-127
WP_033874737.1 61989 59718 - 756PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.40E-73
3.20E-73
5.40E-08
WP_023089065.1 62396 62069 - 108PF09919DUF2149Uncharacterized conserved protein (DUF2149)7.60E-26
WP_010794079.1 62872 62395 - 158PF01618MotA_ExbBMotA/TolQ/ExbB proton channel family1.00E-06
WP_058201462.1 66714 62868 - 1281PF02514CobN-Mg_chelCobN/Magnesium Chelatase3.90E-288
WP_023436425.1 68675 66713 - 653PF00593
PF07715
PF14905
TonB_dep_Rec
Plug
OMP_b-brl_3
TonB dependent receptor
TonB-dependent Receptor Plug Domain
Outer membrane protein beta-barrel family
9.60E-62
4.80E-27
3.10E-09
WP_003088221.1 68841 69651 + 269PF13649
PF04672
PF08242
PF08241
PF13847
Methyltransf_25
Methyltransf_19
Methyltransf_12
Methyltransf_11
Methyltransf_31
Methyltransferase domain
S-adenosyl methyltransferase
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
8.60E-10
7.80E-08
6.00E-06
2.80E-05
4.10E-05
WP_023436426.1 69808 71836 + 675PF13597
PF03477
NRDD
ATP-cone
Anaerobic ribonucleoside-triphosphate reductase
ATP cone domain
3.70E-169
1.20E-20
WP_003088212.1 71879 72026 + 48PF13597NRDDAnaerobic ribonucleoside-triphosphate reductase1.60E-09
WP_058201463.1 72022 72721 + 232PF04055
PF13353
Radical_SAM
Fer4_12
Radical SAM superfamily
4Fe-4S single cluster domain
1.30E-15
5.70E-08

Results for WP_000192984.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_121868128.1 607564 606967 - 198PF12870DUF4878Domain of unknown function (DUF4878)2.50E-04
WP_002168863.1 607722 608267 + 181INFERRED GENE---
WP_002126037.1 608348 608597 + 83INFERRED GENE---
WP_136363202.1 608976 608613 - 120NO PFAM MATCH---
WP_001178302.1 609291 609108 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_000197120.1 610118 612986 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.10E-55
1.20E-36
WP_000569900.1 613119 614379 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
4.00E-13
1.70E-04
WP_001061553.1 614503 616423 + 639NO PFAM MATCH---
WP_000192984.1 616419 618369 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-84
WP_001176760.1 618384 619926 + 513PF00881NitroreductaseNitroreductase family8.90E-12
WP_000996782.1 620367 619956 - 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_001110229.1 621862 620527 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.30E-64
3.70E-20
9.70E-17
1.80E-15
3.40E-10
WP_000332407.1 622059 622491 + 143NO PFAM MATCH---
WP_063220253.1 623772 622536 - 411PF13308
PF13240
PF13248
PF12773
YARHG
zinc_ribbon_2
zf-ribbon_3
DZR
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
Double zinc ribbon
3.00E-22
7.70E-07
3.00E-06
9.80E-04
WP_050279596.1 624577 623791 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
8.10E-06
7.70E-04
WP_048538162.1 624773 625607 + 277NO PFAM MATCH---
WP_100654929.1 626305 625621 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)4.40E-76

Results for WP_019622127.1 [Amphritea japonica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019622118.1 1259230 1257988 - 413PF04055
PF02310
Radical_SAM
B12-binding
Radical SAM superfamily
B12 binding domain
1.30E-11
3.60E-06
WP_019622119.1 1260154 1259260 - 297PF04116FA_hydroxylaseFatty acid hydroxylase4.40E-25
WP_019622120.1 1260782 1260164 - 205PF14526
PF06445
Cass2
GyrI-like
Integron-associated effector binding protein
GyrI-like small molecule binding domain
6.00E-08
3.90E-06
WP_019622121.1 1260963 1260792 - 56NO PFAM MATCH---
WP_019622122.1 1261581 1260966 - 204PF00440TetR_NBacterial regulatory proteins, tetR family1.90E-05
WP_019622123.1 1261690 1262545 + 284PF13748ABC_membrane_3ABC transporter transmembrane region9.60E-76
WP_156815211.1 1263079 1263865 + 261NO PFAM MATCH---
WP_156815212.1 1265087 1264169 - 305NO PFAM MATCH---
WP_019622127.1 1266185 1267916 + 576PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.20E-77
5.00E-49
WP_026340153.1 1268087 1269494 + 468PF18982DUF5716Family of unknown function (DUF5716)6.70E-92
WP_019622129.1 1269493 1270231 + 245PF13835DUF4194Domain of unknown function (DUF4194)8.20E-23
WP_019622130.1 1270230 1273680 + 1149PF13558
PF13555
PF13175
PF02463
PF13304
SbcC_Walker_B
AAA_29
AAA_15
SMC_N
AAA_21
SbcC/RAD50-like, Walker B motif
P-loop containing region of AAA domain
AAA ATPase domain
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
9.10E-21
3.10E-16
1.70E-08
9.20E-06
2.80E-05
WP_019622131.1 1274435 1273703 - 243NO PFAM MATCH---
WP_019622132.1 1274500 1274854 + 117NO PFAM MATCH---
WP_019622133.1 1274971 1276309 + 445PF11902DUF3422Protein of unknown function (DUF3422)5.30E-147
WP_019622134.1 1276328 1276646 + 105PF01722BolABolA-like protein1.20E-25
WP_019622135.1 1276760 1277000 + 79PF04325DUF465Protein of unknown function (DUF465)3.10E-10

Results for WP_019621742.1 [Amphritea japonica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019621734.1 1758944 1759277 + 110PF03334PhaG_MnhG_YufBNa+/H+ antiporter subunit2.30E-25
WP_019621735.1 1759276 1760254 + 325PF04039
PF13244
PF20501
MnhB
MbhD
MbhE
Domain related to MnhB subunit of Na+/H+ antiporter
MBH, subunit D
MBH, subunit E
3.10E-24
2.50E-16
8.10E-08
WP_019621736.1 1760250 1760607 + 118PF00420Oxidored_q2NADH-ubiquinone/plastoquinone oxidoreductase chain 4L1.10E-26
WP_019621737.1 1760606 1762172 + 521PF00361
PF10125
Proton_antipo_M
NADHdeh_related
Proton-conducting membrane transporter
NADH dehydrogenase I, subunit N related protein
6.70E-64
6.90E-08
WP_019621738.1 1762168 1763668 + 499PF00361
PF00662
Proton_antipo_M
Proton_antipo_N
Proton-conducting membrane transporter
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
6.20E-55
3.00E-06
WP_019621739.1 1763733 1763988 + 84NO PFAM MATCH---
WP_019621740.1 1763980 1765705 + 574PF00361Proton_antipo_MProton-conducting membrane transporter3.40E-44
WP_019621741.1 1766017 1766587 + 189PF03613EIID-AGAPTS system mannose/fructose/sorbose family IID component3.50E-04
WP_019621742.1 1766785 1768987 + 733PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.80E-71
5.30E-70
2.60E-09
WP_019621743.1 1769423 1769081 - 113PF08883DOPA_dioxygenDopa 4,5-dioxygenase family3.40E-29
WP_019621744.1 1769617 1770046 + 142PF03928HbpS-likeHaem degrading protein HbpS-like5.90E-29
WP_019621745.1 1771387 1770142 - 414PF13855
PF00069
PF07714
PF12799
PF14580
LRR_8
Pkinase
PK_Tyr_Ser-Thr
LRR_4
LRR_9
Leucine rich repeat
Protein kinase domain
Protein tyrosine and serine/threonine kinase
Leucine Rich repeats (2 copies)
Leucine-rich repeat
4.00E-17
1.90E-14
2.70E-14
1.20E-10
3.20E-07
WP_083935325.1 1771669 1772626 + 318PF00006
PF00004
PF00005
PF13245
PF03215
ATP-synt_ab
AAA
ABC_tran
AAA_19
Rad17
ATP synthase alpha/beta family, nucleotide-binding domain
ATPase family associated with various cellular activities (AAA)
ABC transporter
AAA domain
Rad17 P-loop domain
2.70E-15
1.50E-05
1.30E-04
3.50E-04
6.00E-04
WP_019621747.1 1772680 1772926 + 81PF09932DUF2164Uncharacterized conserved protein (DUF2164)6.30E-28
WP_019621748.1 1773000 1773531 + 176PF13527
PF13508
PF00583
PF13673
Acetyltransf_9
Acetyltransf_7
Acetyltransf_1
Acetyltransf_10
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
6.90E-10
1.10E-09
2.90E-09
6.20E-06
WP_019621749.1 1773688 1774897 + 402PF00270
PF00271
PF04851
PF13245
DEAD
Helicase_C
ResIII
AAA_19
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
Type III restriction enzyme, res subunit
AAA domain
6.30E-53
9.20E-34
1.10E-08
5.20E-06
WP_019621750.1 1774934 1775258 + 107NO PFAM MATCH---

Results for WP_064980750.1 back to top

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Couldn't process WP_064980750.1 Genbank filestream. May be corrupt.

Results for WP_030568650.1 [Streptomyces sp. IB2014 011-12] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076967373.1 115632 114852 - 259PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.30E-20
7.20E-15
WP_076967438.1 116168 115628 - 179PF07702UTRAUTRA domain2.00E-24
WP_076967372.1 116311 116704 + 130PF13581HATPase_c_2Histidine kinase-like ATPase domain3.20E-12
WP_076967371.1 120315 116781 - 1177PF02559
PF03461
PF17757
PF00270
PF00271
CarD_CdnL_TRCF
TRCF
UvrB_inter
DEAD
Helicase_C
CarD-like/TRCF domain
TRCF domain
UvrB interaction domain
DEAD/DEAH box helicase
Helicase conserved C-terminal domain
1.20E-31
1.70E-24
5.20E-21
4.90E-16
2.90E-15
WP_079251399.1 120825 121821 + 331PF00196GerEBacterial regulatory proteins, luxR family2.60E-05
WP_030568654.1 122133 121869 - 87NO PFAM MATCH---
WP_076967436.1 123389 122129 - 419PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
6.60E-23
1.90E-09
WP_018515646.1 123673 123850 + 58NO PFAM MATCH---
WP_030568650.1 125877 123930 - 648PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-81
WP_030568648.1 126629 125873 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
1.90E-29
2.00E-20
5.30E-04
WP_179115522.1 127642 126682 - 319PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
2.90E-28
6.70E-15
1.50E-05
6.20E-05
WP_076967370.1 128787 127683 - 367PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
5.30E-06
7.10E-04
WP_076967369.1 129857 128783 - 357PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term8.00E-94
WP_076967368.1 132565 129853 - 903PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus5.20E-48
WP_076967434.1 134164 132580 - 527PF00881NitroreductaseNitroreductase family3.20E-18
WP_076967367.1 136212 134250 - 653PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.60E-81
WP_076967366.1 138556 136201 - 784NO PFAM MATCH---

Results for WP_005070417.1 [Acinetobacter pittii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005802836.1 291858 292551 + 230PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
6.80E-11
1.00E-10
WP_005070427.1 293539 292594 - 314PF00111
PF00175
Fer2
NAD_binding_1
2Fe-2S iron-sulfur cluster binding domain
Oxidoreductase NAD-binding domain
9.30E-13
6.60E-06
WP_005070426.1 294628 293551 - 358PF19112
PF00355
PF19298
VanA_C
Rieske
KshA_C
Vanillate O-demethylase oxygenase C-terminal domain
Rieske [2Fe-2S] domain
3-Ketosteroid 9alpha-hydroxylase C-terminal domain
3.10E-54
8.80E-19
1.30E-05
WP_005070425.1 296049 294861 - 395PF03573OprDouter membrane porin, OprD family7.10E-35
WP_080631214.1 297015 296061 - 317PF03781FGE-sulfataseSulfatase-modifying factor enzyme 17.10E-67
WP_005070422.1 298726 297040 - 561PF00884
PF16347
PF01663
Sulfatase
DUF4976
Phosphodiest
Sulfatase
Domain of unknown function (DUF4976)
Type I phosphodiesterase / nucleotide pyrophosphatase
1.50E-76
1.40E-05
3.60E-05
WP_005070421.1 299097 300444 + 448PF07690
PF00083
PF06779
MFS_1
Sugar_tr
MFS_4
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
2.30E-47
3.50E-23
4.30E-09
WP_005070418.1 300475 301756 + 426PF03573OprDouter membrane porin, OprD family2.40E-105
WP_005070417.1 302007 304206 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.60E-75
1.50E-72
1.80E-08
WP_005070414.1 305940 304269 - 556PF05199
PF00732
PF13450
PF01266
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
GMC oxidoreductase
GMC oxidoreductase
NAD(P)-binding Rossmann-like domain
FAD dependent oxidoreductase
9.90E-18
1.00E-09
2.60E-05
4.30E-05
WP_005070412.1 306861 305967 - 297PF07859
PF10340
PF20434
PF00326
PF01738
Abhydrolase_3
Say1_Mug180
BD-FAE
Peptidase_S9
DLH
alpha/beta hydrolase fold
Steryl acetyl hydrolase
BD-FAE
Prolyl oligopeptidase family
Dienelactone hydrolase family
3.60E-56
1.80E-11
3.50E-10
1.40E-06
8.10E-04
WP_005070410.1 307788 306933 - 284PF00106
PF13561
PF08659
PF02737
adh_short
adh_short_C2
KR
3HCDH_N
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
4.20E-51
5.70E-37
3.10E-12
6.60E-04
WP_005070408.1 309320 307832 - 495PF00743
PF13738
PF07992
PF13450
PF13434
FMO-like
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.80E-21
2.20E-16
2.50E-12
2.80E-11
7.20E-09
WP_005070407.1 309455 310469 + 337PF12625
PF12833
PF00165
Arabinose_bd
HTH_18
HTH_AraC
Arabinose-binding domain of AraC transcription regulator, N-term
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
2.40E-37
1.20E-14
8.50E-05
WP_005070405.1 311356 310480 - 291PF04072LCMLeucine carboxyl methyltransferase7.20E-39
WP_005070402.1 312993 311469 - 507PF13738
PF00743
PF07992
PF13450
PF13434
Pyr_redox_3
FMO-like
Pyr_redox_2
NAD_binding_8
Lys_Orn_oxgnase
Pyridine nucleotide-disulphide oxidoreductase
Flavin-binding monooxygenase-like
Pyridine nucleotide-disulphide oxidoreductase
NAD(P)-binding Rossmann-like domain
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
2.90E-17
2.10E-15
8.50E-14
1.10E-10
2.10E-07
WP_017386375.1 313849 313015 - 277PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
2.50E-48
2.00E-41
3.00E-13

Results for WP_004918110.1 [Providencia thailandensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004918094.1 103780 105124 + 447PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.60E-64
8.30E-24
2.30E-16
7.10E-15
9.40E-07
WP_004918096.1 105274 106564 + 429PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.80E-36
6.90E-32
WP_004918098.1 107124 106644 - 159PF01037
PF13412
PF13404
AsnC_trans_reg
HTH_24
HTH_AsnC-type
Lrp/AsnC ligand binding domain
Winged helix-turn-helix DNA-binding
AsnC-type helix-turn-helix domain
6.80E-21
3.80E-20
5.30E-16
WP_036943597.1 107291 107714 + 140PF09391DUF2000Protein of unknown function (DUF2000)2.90E-36
WP_141173308.1 107750 108377 + 208PF01810LysELysE type translocator2.30E-23
WP_014657838.1 109212 108417 - 264PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
4.30E-31
1.20E-18
1.30E-05
WP_004918106.1 111638 109355 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.50E-207
1.60E-43
WP_004918108.1 112565 111707 - 285PF01226Form_Nir_transFormate/nitrite transporter5.40E-74
WP_004918110.1 114663 112908 - 584PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-84
7.00E-67
WP_014657840.1 114841 115885 + 347PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
6.90E-60
6.70E-25
WP_141173309.1 117358 115921 - 478PF07690MFS_1Major Facilitator Superfamily4.50E-31
WP_004918116.1 117831 119229 + 465PF03573OprDouter membrane porin, OprD family6.20E-22
WP_141173310.1 119297 121976 + 892PF00728
PF03173
PF03174
PF02838
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Glycosyl hydrolase family 20, catalytic domain
Putative carbohydrate binding domain
Chitobiase/beta-hexosaminidase C-terminal domain
Glycosyl hydrolase family 20, domain 2
3.80E-110
1.00E-61
3.50E-26
6.20E-13
WP_004918120.1 122729 122279 - 149PF01475FURFerric uptake regulator family8.90E-48
WP_014657842.1 123430 122902 - 175PF00258
PF12641
PF12724
Flavodoxin_1
Flavodoxin_3
Flavodoxin_5
Flavodoxin
Flavodoxin domain
Flavodoxin domain
1.00E-32
2.20E-10
2.30E-07
WP_004918124.1 123870 123576 - 97PF01402RHH_1Ribbon-helix-helix protein, copG family9.10E-08
WP_250170491.1 126148 124039 - 702PF00664
PF00005
PF03412
PF13401
PF02463
ABC_membrane
ABC_tran
Peptidase_C39
AAA_22
SMC_N
ABC transporter transmembrane region
ABC transporter
Peptidase C39 family
AAA domain
RecF/RecN/SMC N terminal domain
2.40E-44
4.30E-33
3.60E-07
4.60E-05
4.80E-05

Results for WP_016451477.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_006024524.1 [Burkholderia humptydooensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015601447.1 585396 585048 - 115PF02627CMDCarboxymuconolactone decarboxylase family3.90E-20
WP_006024517.1 586454 586112 - 113NO PFAM MATCH---
WP_006024518.1 586890 586512 - 125NO PFAM MATCH---
WP_006024519.1 587864 587510 - 117NO PFAM MATCH---
WP_015600851.1 588133 589132 + 332PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
8.50E-17
2.10E-08
WP_043282003.1 589142 593234 + 1363PF00069
PF07714
PF13191
PF13401
PF05729
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
NACHT
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
NACHT domain
2.90E-45
1.40E-26
1.00E-18
1.10E-05
1.10E-04
WP_015601332.1 593230 593593 + 120NO PFAM MATCH---
WP_006024523.1 593594 593957 + 120NO PFAM MATCH---
WP_006024524.1 594051 596328 + 758PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.30E-93
WP_045554872.1 596862 599193 + 776PF00563
PF00990
PF08448
EAL
GGDEF
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS fold
3.50E-58
5.60E-33
9.50E-04
WP_006024526.1 600487 599218 - 422PF01943
PF13440
PF14667
Polysacc_synt
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
3.20E-31
3.40E-07
6.20E-05
WP_006024527.1 601745 600548 - 398PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
1.20E-16
4.10E-14
3.00E-05
WP_006024528.1 603371 601778 - 530PF01050
PF00483
PF07883
PF12804
MannoseP_isomer
NTP_transferase
Cupin_2
NTP_transf_3
Mannose-6-phosphate isomerase
Nucleotidyl transferase
Cupin domain
MobA-like NTP transferase domain
1.70E-71
1.50E-52
1.80E-08
8.90E-06
WP_009911218.1 604000 603367 - 210PF13673Acetyltransf_10Acetyltransferase (GNAT) domain7.20E-05
WP_162486752.1 604359 603966 - 130NO PFAM MATCH---
WP_009911220.1 604377 605622 + 414PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
1.40E-24
2.40E-17
4.20E-09
WP_006024531.1 605649 606363 + 237PF01569PAP2PAP2 superfamily2.30E-10

Results for WP_000191875.1 [Bacillus toyonensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_200203773.1 1201317 1202103 + 261PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
1.40E-05
3.70E-05
WP_200203774.1 1202122 1203358 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
2.20E-21
2.70E-06
WP_000336278.1 1203827 1203404 - 140NO PFAM MATCH---
WP_087949160.1 1204026 1205361 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.60E-62
3.10E-19
6.20E-17
2.20E-15
6.90E-10
WP_002135035.1 1205438 1205925 + 162INFERRED GENE---
WP_000996794.1 1206175 1206586 + 136PF13048DUF3908Protein of unknown function (DUF3908)3.80E-49
WP_000025730.1 1207208 1206617 - 196PF13649
PF08241
PF13847
PF01209
PF13489
Methyltransf_25
Methyltransf_11
Methyltransf_31
Ubie_methyltran
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
2.20E-18
5.60E-18
3.00E-16
1.80E-12
1.80E-12
WP_098709999.1 1208841 1207299 - 513PF00881NitroreductaseNitroreductase family6.90E-13
WP_000191875.1 1210806 1208856 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.20E-85
WP_052943558.1 1212722 1210802 - 639NO PFAM MATCH---
WP_200203776.1 1214107 1212847 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
1.20E-80
3.40E-20
5.00E-13
1.60E-04
WP_087949155.1 1217105 1214237 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
7.00E-63
5.00E-55
1.30E-36
WP_000428507.1 1218072 1218288 + 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.30E-05
7.40E-05
WP_001000065.1 1218284 1218662 + 125NO PFAM MATCH---
WP_001178305.1 1218690 1218873 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001034135.1 1219008 1219371 + 120NO PFAM MATCH---
WP_001193096.1 1219388 1219658 + 89NO PFAM MATCH---

Results for WP_010748139.1 [Enterococcus casseliflavus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010748141.1 778 184 - 197PF00005
PF02463
PF13304
PF13476
ABC_tran
SMC_N
AAA_21
AAA_23
ABC transporter
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
1.90E-12
5.00E-11
2.30E-10
4.00E-04
WP_010748139.1 2518 1483 - 344PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.00E-12
WP_010748138.1 3489 2532 - 318PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-05
WP_034695557.1 4114 3490 - 207NO PFAM MATCH---
WP_010748136.1 4949 4106 - 280NO PFAM MATCH---
WP_010748135.1 5284 5038 - 81NO PFAM MATCH---
WP_010748134.1 6000 5631 - 122PF03965Penicillinase_RPenicillinase repressor7.30E-06

Results for WP_038397799.1 [Salmonella enterica subsp. arizonae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
NP_309009.1 4177905 4178428 + 174INFERRED GENE---
WP_058819420.1 4178732 4179881 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
4.60E-24
8.30E-08
5.30E-07
WP_000073214.1 4180098 4181520 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
1.20E-28
1.40E-13
WP_079829375.1 4183044 4182246 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.30E-31
1.90E-18
2.70E-06
NP_459946.1 4183162 4183255 + 31INFERRED GENE---
WP_024131946.1 4183616 4184567 + 316PF11047SopDSalmonella outer protein D1.30E-148
WP_140197838.1 4186927 4184644 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.30E-208
4.90E-44
WP_012210315.1 4187845 4186987 - 285PF01226Form_Nir_transFormate/nitrite transporter5.40E-75
WP_038397799.1 4190009 4188248 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.50E-81
7.90E-65
WP_000642865.1 4190145 4190838 + 230PF04239DUF421Protein of unknown function (DUF421)1.40E-15
WP_079829374.1 4191027 4192116 + 362PF00266Aminotran_5Aminotransferase class-V3.10E-68
WP_038396286.1 4192186 4193470 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.30E-150
NP_459954.1 4193518 4193792 + 91INFERRED GENE---
WP_140197839.1 4194024 4194708 + 227PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
9.60E-85
3.80E-07
3.30E-04
7.50E-04
WP_140197840.1 4194821 4196495 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
3.30E-100
1.60E-11
4.10E-07
WP_000167329.1 4196650 4196935 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.60E-29
6.20E-08
9.10E-05
WP_140197841.1 4197164 4199429 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
7.80E-54
1.40E-14
8.60E-07

Results for WP_041205902.1 [Aeromonas media] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_231557514.1 2792827 2793145 + 105PF01176
PF01650
eIF-1a
Peptidase_C13
Translation initiation factor 1A / IF-1
Peptidase C13 family
6.30E-26
7.00E-04
WP_005325408.1 2795467 2793214 - 750PF07724
PF17871
PF10431
PF00004
PF07728
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA domain (Cdc48 subfamily)
AAA lid domain
C-terminal, D2-small domain, of ClpB protein
ATPase family associated with various cellular activities (AAA)
AAA domain (dynein-related subfamily)
2.20E-53
9.60E-29
8.90E-25
1.10E-23
8.50E-21
WP_005325410.1 2795845 2795527 - 105PF02617ClpSATP-dependent Clp protease adaptor protein ClpS2.20E-34
WP_005300025.1 2796073 2796292 + 72PF00313
PF08206
CSD
OB_RNB
'Cold-shock' DNA-binding domain
Ribonuclease B OB domain
3.20E-28
8.60E-04
WP_005325413.1 2797530 2796417 - 370PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.80E-58
1.80E-22
WP_041204923.1 2797809 2798952 + 380PF01609DDE_Tnp_1Transposase DDE domain2.70E-13
WP_005326802.1 2799129 2799444 + 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein2.40E-29
WP_041205901.1 2800223 2799524 - 232PF03483B3_4B3/4 domain4.60E-19
WP_041205902.1 2800533 2802294 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.90E-78
1.30E-64
WP_005326809.1 2802675 2803524 + 282PF01226Form_Nir_transFormate/nitrite transporter1.30E-74
WP_005326811.1 2803559 2805848 + 762PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.50E-202
4.80E-43
WP_041205904.1 2806821 2806383 - 145PF03692CxxCxxCCPutative zinc- or iron-chelating domain4.10E-09
WP_139750789.1 2807181 2807394 + 70NO PFAM MATCH---
WP_041205828.1 2807646 2808984 + 445PF13006
PF01609
Nterm_IS4
DDE_Tnp_1
Insertion element 4 transposase N-terminal
Transposase DDE domain
8.90E-26
1.30E-21
WP_005326945.1 2809912 2809039 - 290PF02629
PF00549
PF13607
PF13380
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
CoA binding domain
CoA-ligase
Succinyl-CoA ligase like flavodoxin domain
CoA binding domain
3.30E-31
7.50E-21
9.10E-13
4.10E-04
WP_005326943.1 2811078 2809911 - 388PF08442
PF00549
PF13549
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
ATP-grasp domain
CoA-ligase
ATP-grasp domain
2.90E-81
3.90E-24
1.10E-14
WP_201035139.1 2812372 2811184 - 395PF00198
PF00364
PF02817
2-oxoacid_dh
Biotin_lipoyl
E3_binding
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
1.00E-82
1.50E-16
8.60E-15

Results for WP_032655568.1 back to top

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Couldn't process WP_032655568.1 Genbank filestream. May be corrupt.

Results for WP_044521954.1 [Klebsiella quasipneumoniae subsp. quasipneumoniae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004201371.1 16556 17849 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
1.80E-36
2.00E-33
WP_271097257.1 18047 20486 + 812PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
4.50E-108
2.70E-28
5.20E-18
WP_048334592.1 20496 21114 + 205PF13247
PF12797
PF13187
PF00037
PF12838
Fer4_11
Fer4_2
Fer4_9
Fer4
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
7.70E-28
3.70E-13
2.00E-12
4.60E-12
2.80E-11
WP_023289013.1 21115 21979 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.90E-112
WP_008805851.1 22253 23402 + 382PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
1.10E-25
2.50E-09
1.90E-07
WP_271097258.1 24296 23555 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.90E-31
3.20E-18
9.10E-06
WP_023289014.1 26770 24487 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-207
1.60E-43
WP_023289015.1 27679 26821 - 285PF01226Form_Nir_transFormate/nitrite transporter2.30E-74
WP_044521954.1 29825 28064 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
6.70E-84
2.10E-67
WP_023289017.1 29940 30633 + 230PF04239DUF421Protein of unknown function (DUF421)1.90E-15
WP_023289018.1 30821 31910 + 362PF00266Aminotran_5Aminotransferase class-V3.50E-70
WP_032455267.1 31983 33267 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.00E-150
WP_049014842.1 33414 34182 + 255PF01435Peptidase_M48Peptidase family M482.60E-27
WP_271097261.1 34353 35037 + 227PF02224
PF13189
Cytidylate_kin
Cytidylate_kin2
Cytidylate kinase
Cytidylate kinase-like family
2.90E-82
5.90E-08
WP_002898162.1 35170 36844 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.00E-98
5.10E-12
2.70E-06
WP_002898165.1 36995 37283 + 95PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
6.20E-08
9.40E-05
WP_271097263.1 37485 39750 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.50E-51
2.30E-17
6.90E-04

Results for WP_036900836.1 back to top

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Couldn't process WP_036900836.1 Genbank filestream. May be corrupt.

Results for WP_013401629.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_023221572.1 [Salmonella enterica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_061380291.1 21459 22323 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)1.10E-119
WP_000109274.1 22672 23821 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.40E-31
6.30E-09
3.30E-07
2.00E-04
WP_001134260.1 24038 25460 + 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
2.00E-28
7.50E-14
WP_267272916.1 26550 25752 - 265PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
9.90E-32
2.10E-18
3.00E-06
WP_077951497.1 26995 26668 - 108NO PFAM MATCH---
WP_267272917.1 27125 28079 + 317PF11047SopDSalmonella outer protein D1.30E-148
WP_001292799.1 30433 28150 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.80E-208
4.80E-44
WP_000642539.1 31350 30492 - 285PF01226Form_Nir_transFormate/nitrite transporter3.50E-75
WP_023221572.1 33515 31754 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.20E-82
3.60E-65
WP_000642868.1 33651 34344 + 230PF04239DUF421Protein of unknown function (DUF421)1.50E-15
WP_000079584.1 34529 35618 + 362PF00266Aminotran_5Aminotransferase class-V1.20E-69
WP_000445191.1 35688 36972 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.40E-150
WP_000792301.1 37114 37876 + 253PF01435Peptidase_M48Peptidase family M484.50E-26
WP_000125007.1 38048 38732 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.10E-85
1.80E-07
2.40E-04
8.60E-04
9.00E-04
WP_000140324.1 38845 40519 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.70E-100
9.30E-12
3.90E-07
WP_000167332.1 40674 40959 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.70E-29
1.20E-07
1.60E-04
WP_267272918.1 41188 43453 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
2.00E-53
1.10E-14
1.80E-06

Results for WP_013812291.1 [Serratia plymuthica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013812284.1 1801976 1803269 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.90E-35
6.80E-29
WP_013812285.1 1803940 1803328 - 203PF01810LysELysE type translocator2.10E-33
WP_013812286.1 1804830 1804038 - 263PF12833
PF02311
PF00165
HTH_18
AraC_binding
HTH_AraC
Helix-turn-helix domain
AraC-like ligand binding domain
Bacterial regulatory helix-turn-helix proteins, AraC family
7.50E-23
7.80E-21
1.60E-17
WP_013812287.1 1805238 1804869 - 122PF08818
PF18899
DUF1801
DUF5655
Domain of unknown function (DU1801)
Domain of unknown function (DUF5655)
1.40E-12
8.20E-05
WP_013812288.1 1805415 1806561 + 381PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
1.00E-30
4.80E-13
4.30E-08
7.90E-08
WP_013812289.1 1807350 1806609 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.50E-29
1.00E-18
1.10E-05
WP_013812290.1 1809937 1807654 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.60E-206
5.70E-43
WP_004942626.1 1810852 1809991 - 286PF01226Form_Nir_transFormate/nitrite transporter1.70E-74
WP_013812291.1 1813108 1811344 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
4.40E-83
4.90E-66
WP_013812292.1 1813256 1814303 + 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.40E-63
2.30E-26
WP_013812293.1 1814752 1815838 + 361PF00266Aminotran_5Aminotransferase class-V1.70E-64
WP_013812294.1 1815952 1817239 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.30E-150
WP_013812295.1 1817514 1818204 + 229PF02224
PF13189
PF13238
PF13207
PF13671
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
AAA_33
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
AAA domain
4.70E-82
5.40E-08
4.50E-06
2.40E-04
7.70E-04
WP_004942650.1 1818385 1820059 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.50E-98
1.20E-11
5.00E-07
WP_004942652.1 1820121 1820406 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
4.60E-28
2.40E-07
WP_254754967.1 1820659 1822981 + 773PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
2.50E-49
5.00E-18
6.90E-09
5.20E-04
WP_013812297.1 1823016 1824765 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
9.20E-57
1.30E-35
3.70E-09
1.90E-05
3.00E-05

Results for WP_003407188.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_015724312.1 [Desulfobulbus propionicus DSM 2032] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015724304.1 1850786 1853090 + 767PF17764
PF18074
PF04851
PF00271
PF00270
PriA_3primeBD
PriA_C
ResIII
Helicase_C
DEAD
3'DNA-binding domain (3'BD)
Primosomal protein N C-terminal domain
Type III restriction enzyme, res subunit
Helicase conserved C-terminal domain
DEAD/DEAH box helicase
5.80E-26
5.60E-24
4.30E-11
3.10E-10
8.40E-10
WP_015724305.1 1853649 1853211 - 145PF01442
PF13801
Apolipoprotein
Metal_resist
Apolipoprotein A1/A4/E domain
Heavy-metal resistance
4.30E-04
9.30E-04
WP_081457988.1 1853848 1855828 + 659PF02518
PF00512
PF08448
PF00989
HATPase_c
HisKA
PAS_4
PAS
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
His Kinase A (phospho-acceptor) domain
PAS fold
PAS fold
2.80E-24
2.10E-11
2.90E-08
2.50E-06
WP_245529496.1 1856222 1855850 - 123NO PFAM MATCH---
WP_015724308.1 1856233 1856785 + 183PF02622DUF179Uncharacterized ACR, COG16789.00E-43
WP_015724309.1 1856857 1857286 + 142PF03692CxxCxxCCPutative zinc- or iron-chelating domain3.00E-12
WP_015724310.1 1857282 1857750 + 155PF02590SPOUT_MTasePredicted SPOUT methyltransferase3.60E-44
WP_015724311.1 1857889 1858408 + 172PF02367
PF05729
TsaE
NACHT
Threonylcarbamoyl adenosine biosynthesis protein TsaE
NACHT domain
7.90E-36
2.70E-04
WP_015724312.1 1858494 1860261 + 588PF02624
PF07719
PF00515
PF13414
PF13424
YcaO
TPR_2
TPR_1
TPR_11
TPR_12
YcaO cyclodehydratase, ATP-ad Mg2+-binding
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Tetratricopeptide repeat
1.50E-71
3.70E-21
4.20E-20
5.00E-16
5.80E-15
WP_015724313.1 1860257 1861319 + 353PF01075
PF04230
Glyco_transf_9
PS_pyruv_trans
Glycosyltransferase family 9 (heptosyltransferase)
Polysaccharide pyruvyl transferase
1.30E-51
8.90E-04
WP_015724314.1 1861318 1861942 + 207PF13242
PF13344
PF13419
PF12710
Hydrolase_like
Hydrolase_6
HAD_2
HAD
HAD-hyrolase-like
Haloacid dehalogenase-like hydrolase
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
1.10E-14
8.20E-05
3.50E-04
7.80E-04
WP_015724315.1 1861999 1862596 + 198PF04011
PF13174
LemA
TPR_6
LemA family
Tetratricopeptide repeat
3.00E-60
1.20E-04
WP_015724316.1 1862612 1863503 + 296PF04536TPM_phosphataseTPM domain5.20E-38
WP_015724317.1 1863505 1864189 + 227PF04536TPM_phosphataseTPM domain1.30E-09
WP_015724318.1 1864192 1865050 + 285PF03009GDPDGlycerophosphoryl diester phosphodiesterase family3.90E-40
WP_015724319.1 1865737 1865080 - 218PF00929
PF16473
RNase_T
Rv2179c-like
Exonuclease
3'-5' exoribonuclease Rv2179c-like domain
1.90E-26
1.50E-07
WP_015724320.1 1866500 1865894 - 201PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)4.00E-54

Results for WP_011845789.1 [Shewanella baltica OS117] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_227257780.1 866554 867565 + 336PF01738
PF06500
PF02129
PF12146
PF05448
DLH
FrsA-like
Peptidase_S15
Hydrolase_4
AXE1
Dienelactone hydrolase family
Esterase FrsA-like
X-Pro dipeptidyl-peptidase (S15 family)
Serine aminopeptidase, S33
Acetyl xylan esterase (AXE1)
9.20E-07
1.70E-04
2.40E-04
2.90E-04
4.50E-04
WP_014620594.1 868771 867799 - 323PF00990GGDEFDiguanylate cyclase, GGDEF domain2.10E-37
WP_014620595.1 869727 869160 - 188PF10881DUF2726Protein of unknown function (DUF2726)2.70E-41
WP_006080205.1 870135 869889 - 81PF11730DUF3297Protein of unknown function (DUF3297)9.70E-35
WP_011845785.1 870466 870883 + 138PF12614RRF_GIRibosome recycling factor2.50E-59
WP_011845786.1 871094 870914 - 59PF20027DUF6435Family of unknown function (DUF6435)1.20E-28
WP_014620596.1 872973 871308 - 554PF00015
PF17200
PF08269
PF00672
PF17201
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
Methyl-accepting chemotaxis protein (MCP) signalling domain
Single Cache domain 2
Cache domain
HAMP domain
Cache 3/Cache 2 fusion domain
6.30E-42
2.70E-28
1.40E-27
3.00E-14
1.10E-11
WP_011845788.1 873282 873513 + 76NO PFAM MATCH---
WP_011845789.1 873772 875962 + 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.40E-72
3.80E-71
3.20E-09
WP_011845790.1 876373 877852 + 492PF12151MVLMannan-binding protein1.10E-05
WP_011845791.1 878986 878077 - 302PF00990GGDEFDiguanylate cyclase, GGDEF domain3.00E-42
WP_006084120.1 879369 879840 + 156PF06172Cupin_5Cupin superfamily (DUF985)1.30E-43
WP_006080213.1 880066 880846 + 259PF01790LGTProlipoprotein diacylglyceryl transferase3.30E-67
WP_011845792.1 881847 880929 - 305PF07859
PF20434
PF00135
PF10340
Abhydrolase_3
BD-FAE
COesterase
Say1_Mug180
alpha/beta hydrolase fold
BD-FAE
Carboxylesterase family
Steryl acetyl hydrolase
1.70E-65
3.30E-20
2.30E-12
3.90E-10
WP_011845793.1 882365 883727 + 453PF01554
PF14667
MatE
Polysacc_synt_C
MatE
Polysaccharide biosynthesis C-terminal domain
4.00E-46
6.30E-06
WP_011845794.1 884212 883786 - 141PF00571CBSCBS domain6.40E-22
WP_011845795.1 884467 886234 + 588PF09423
PF16655
PF16656
PhoD
PhoD_N
Pur_ac_phosph_N
PhoD-like phosphatase
PhoD-like phosphatase, N-terminal domain
Purple acid Phosphatase, N-terminal domain
2.90E-126
1.30E-32
1.80E-04

Results for WP_040111608.1 [Rhizobium sophoriradicis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014765039.1 311377 311852 + 158INFERRED GENE---
WP_077989561.1 313305 312027 - 425PF13378
PF07476
PF02746
MR_MLE_C
MAAL_C
MR_MLE_N
Enolase C-terminal domain-like
Methylaspartate ammonia-lyase C-terminus
Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
1.90E-60
7.90E-05
1.50E-04
WP_077989560.1 314205 313470 - 244PF13561
PF00106
PF01370
PF00107
PF08659
adh_short_C2
adh_short
Epimerase
ADH_zinc_N
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
NAD dependent epimerase/dehydratase family
Zinc-binding dehydrogenase
KR domain
3.10E-57
3.00E-44
2.30E-06
1.20E-04
2.00E-04
WP_009991484.1 314506 315292 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
2.60E-12
2.60E-11
4.80E-08
1.80E-06
5.20E-05
WP_077989559.1 315363 316200 + 278PF04909Amidohydro_2Amidohydrolase3.80E-41
WP_004668301.1 316471 316876 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.70E-07
3.30E-06
WP_040111606.1 317182 316915 - 88NO PFAM MATCH---
WP_077989558.1 317991 317247 - 247PF07812TfuATfuA-like protein1.40E-38
WP_040111608.1 319253 317987 - 421PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-64
WP_010041717.1 319410 319266 - 47NO PFAM MATCH---
WP_077989557.1 321467 319514 - 650PF03704
PF14559
PF00515
PF07719
PF13424
BTAD
TPR_19
TPR_1
TPR_2
TPR_12
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-14
1.30E-11
8.80E-09
4.60E-08
4.00E-07
WP_183738186.1 322693 321772 - 306PF01729
PF02749
PF13533
QRPTase_C
QRPTase_N
Biotin_lipoyl_2
Quinolinate phosphoribosyl transferase, C-terminal domain
Quinolinate phosphoribosyl transferase, N-terminal domain
Biotin-lipoyl like
6.90E-59
1.10E-27
3.50E-04
WP_077989555.1 324212 322670 - 513PF00890
PF07992
PF02910
PF01266
FAD_binding_2
Pyr_redox_2
Succ_DH_flav_C
DAO
FAD binding domain
Pyridine nucleotide-disulphide oxidoreductase
Fumarate reductase flavoprotein C-term
FAD dependent oxidoreductase
1.60E-78
1.30E-04
1.60E-04
2.10E-04
WP_077989554.1 325180 324208 - 323PF02445NadAQuinolinate synthetase A protein6.00E-113
WP_183738191.1 326176 325249 - 308PF19368AraR_CAraR C-terminal winged HTH domain1.10E-07
WP_077989552.1 327330 326517 - 270PF02548Pantoate_transfKetopantoate hydroxymethyltransferase3.80E-43
WP_077989551.1 328586 327359 - 408PF07992
PF14759
PF00070
PF01266
PF01262
Pyr_redox_2
Reductase_C
Pyr_redox
DAO
AlaDh_PNT_C
Pyridine nucleotide-disulphide oxidoreductase
Reductase C-terminal
Pyridine nucleotide-disulphide oxidoreductase
FAD dependent oxidoreductase
Alanine dehydrogenase/PNT, C-terminal domain
2.90E-65
7.90E-21
2.30E-19
6.50E-06
8.20E-05

Results for WP_061062052.1 [Pantoea vagans] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_061062046.1 1575191 1578758 + 1188PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.40E-72
1.10E-43
5.20E-28
5.40E-27
4.50E-05
WP_003849334.1 1578935 1579547 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
1.00E-56
1.10E-05
WP_061062047.1 1579554 1580898 + 447PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
8.60E-64
1.80E-23
5.20E-17
2.20E-14
2.10E-07
WP_061062048.1 1580990 1582283 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.80E-37
6.10E-34
WP_061062049.1 1582601 1583753 + 383PF07690
PF06779
PF00083
PF13347
MFS_1
MFS_4
Sugar_tr
MFS_2
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS/sugar transport protein
6.20E-32
3.50E-10
7.70E-07
1.00E-04
WP_010254935.1 1584546 1583805 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.60E-30
7.70E-17
6.60E-05
WP_061062050.1 1586991 1584708 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.40E-204
8.10E-44
WP_061062051.1 1587923 1587062 - 286PF01226Form_Nir_transFormate/nitrite transporter2.10E-72
WP_061062052.1 1590060 1588296 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-81
2.50E-66
WP_013357313.1 1590373 1591459 + 361PF00266Aminotran_5Aminotransferase class-V7.60E-64
WP_061062053.1 1591541 1592828 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.10E-145
WP_061062054.1 1593027 1593714 + 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.00E-82
2.50E-07
2.90E-05
5.20E-05
9.20E-04
WP_013357316.1 1593822 1595496 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-98
6.10E-13
3.20E-07
WP_003849360.1 1595578 1595863 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_061063692.1 1596067 1598323 + 751PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
5.90E-50
4.60E-20
1.90E-05
WP_013357318.1 1598357 1600106 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
7.50E-59
2.20E-35
8.90E-10
1.80E-06
2.40E-04
WP_061062055.1 1600102 1601089 + 328PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase4.20E-119

Results for WP_066062585.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_006024524.1 [Burkholderia humptydooensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_015601447.1 585396 585048 - 115PF02627CMDCarboxymuconolactone decarboxylase family3.90E-20
WP_006024517.1 586454 586112 - 113NO PFAM MATCH---
WP_006024518.1 586890 586512 - 125NO PFAM MATCH---
WP_006024519.1 587864 587510 - 117NO PFAM MATCH---
WP_015600851.1 588133 589132 + 332PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
8.50E-17
2.10E-08
WP_043282003.1 589142 593234 + 1363PF00069
PF07714
PF13191
PF13401
PF05729
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
NACHT
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
NACHT domain
2.90E-45
1.40E-26
1.00E-18
1.10E-05
1.10E-04
WP_015601332.1 593230 593593 + 120NO PFAM MATCH---
WP_006024523.1 593594 593957 + 120NO PFAM MATCH---
WP_006024524.1 594051 596328 + 758PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.30E-93
WP_045554872.1 596862 599193 + 776PF00563
PF00990
PF08448
EAL
GGDEF
PAS_4
EAL domain
Diguanylate cyclase, GGDEF domain
PAS fold
3.50E-58
5.60E-33
9.50E-04
WP_006024526.1 600487 599218 - 422PF01943
PF13440
PF14667
Polysacc_synt
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
3.20E-31
3.40E-07
6.20E-05
WP_006024527.1 601745 600548 - 398PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
1.20E-16
4.10E-14
3.00E-05
WP_006024528.1 603371 601778 - 530PF01050
PF00483
PF07883
PF12804
MannoseP_isomer
NTP_transferase
Cupin_2
NTP_transf_3
Mannose-6-phosphate isomerase
Nucleotidyl transferase
Cupin domain
MobA-like NTP transferase domain
1.70E-71
1.50E-52
1.80E-08
8.90E-06
WP_009911218.1 604000 603367 - 210PF13673Acetyltransf_10Acetyltransferase (GNAT) domain7.20E-05
WP_162486752.1 604359 603966 - 130NO PFAM MATCH---
WP_009911220.1 604377 605622 + 414PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
1.40E-24
2.40E-17
4.20E-09
WP_006024531.1 605649 606363 + 237PF01569PAP2PAP2 superfamily2.30E-10

Results for WP_010113941.1 [Burkholderia oklahomensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010113921.1 2240240 2236970 - 1089PF18276
PF13176
TcA_TcB_BD
TPR_7
Tc toxin complex TcA C-terminal TcB-binding domain
Tetratricopeptide repeat
3.50E-27
1.90E-04
WP_010101653.1 2241597 2241255 - 113NO PFAM MATCH---
WP_025989653.1 2242036 2241658 - 125NO PFAM MATCH---
WP_010101657.1 2243026 2242672 - 117NO PFAM MATCH---
WP_010101658.1 2243295 2244297 + 333PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
7.40E-17
9.30E-07
WP_045568068.1 2244307 2248339 + 1343PF00069
PF07714
PF13191
PF13401
PF05729
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
NACHT
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
NACHT domain
1.30E-45
3.80E-26
7.50E-20
1.20E-06
4.40E-05
WP_025989654.1 2248368 2248731 + 120PF02979NHase_alphaNitrile hydratase, alpha chain9.10E-04
WP_010101664.1 2248732 2249092 + 119PF14407Frankia_peptideRibosomally synthesized peptide prototyped by Frankia Franean1_4349.5.50E-04
WP_010113941.1 2249185 2251444 + 752PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding9.40E-93
WP_010113943.1 2251544 2252318 + 257PF00596Aldolase_IIClass II Aldolase and Adducin N-terminal domain3.90E-41
WP_010113945.1 2252748 2255169 + 806PF00563
PF00990
EAL
GGDEF
EAL domain
Diguanylate cyclase, GGDEF domain
6.20E-59
2.30E-34
WP_010101671.1 2256533 2255264 - 422PF01943
PF13440
PF14667
Polysacc_synt
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
1.50E-31
2.90E-08
8.10E-05
WP_010113948.1 2257806 2256609 - 398PF00534
PF13692
PF13439
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferase 4-like domain
3.80E-17
1.70E-14
7.70E-05
4.90E-04
WP_010113950.1 2259432 2257839 - 530PF01050
PF00483
PF07883
PF12804
MannoseP_isomer
NTP_transferase
Cupin_2
NTP_transf_3
Mannose-6-phosphate isomerase
Nucleotidyl transferase
Cupin domain
MobA-like NTP transferase domain
9.50E-73
1.20E-50
3.50E-09
4.10E-06
WP_010101678.1 2260061 2259428 - 210PF13673Acetyltransf_10Acetyltransferase (GNAT) domain5.80E-07
WP_004200297.1 2260027 2260473 + 148INFERRED GENE---
WP_010113954.1 2260434 2261703 + 422PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
3.90E-25
7.60E-18
1.30E-09

Results for WP_043299866.1 [Burkholderia pseudomallei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004189296.1 2464530 2463288 - 413PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
5.60E-26
1.70E-18
7.60E-10
WP_004189578.1 2464548 2464941 + 130NO PFAM MATCH---
WP_004189783.1 2464907 2465558 + 216PF13673Acetyltransf_10Acetyltransferase (GNAT) domain1.80E-04
WP_004522825.1 2465554 2467147 + 530PF01050
PF00483
PF07883
PF12804
MannoseP_isomer
NTP_transferase
Cupin_2
NTP_transf_3
Mannose-6-phosphate isomerase
Nucleotidyl transferase
Cupin domain
MobA-like NTP transferase domain
2.80E-72
9.90E-51
7.50E-09
8.40E-05
WP_004547147.1 2467181 2468378 + 398PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
4.40E-16
1.10E-13
5.50E-05
WP_004526102.1 2468454 2469723 + 422PF01943
PF13440
PF14667
Polysacc_synt
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
1.80E-31
2.80E-08
1.90E-04
WP_012730560.1 2472277 2469913 - 787PF00563
PF00990
EAL
GGDEF
EAL domain
Diguanylate cyclase, GGDEF domain
1.80E-58
6.60E-33
WP_043299865.1 2473536 2472759 - 258PF00596Aldolase_IIClass II Aldolase and Adducin N-terminal domain4.20E-41
WP_043299866.1 2475906 2473605 - 766PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-92
WP_004189426.1 2476360 2475997 - 120NO PFAM MATCH---
WP_004196290.1 2476724 2476361 - 120NO PFAM MATCH---
WP_038771825.1 2480800 2476720 - 1359PF00069
PF07714
PF13191
PF13401
PF05729
Pkinase
PK_Tyr_Ser-Thr
AAA_16
AAA_22
NACHT
Protein kinase domain
Protein tyrosine and serine/threonine kinase
AAA ATPase domain
AAA domain
NACHT domain
1.10E-45
1.60E-26
5.10E-19
5.10E-06
4.00E-05
WP_004190190.1 2481809 2480810 - 332PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
2.70E-17
1.10E-08
WP_004522832.1 2482077 2482431 + 117NO PFAM MATCH---
WP_004189347.1 2482427 2482673 + 81NO PFAM MATCH---
WP_004530923.1 2482914 2483292 + 125NO PFAM MATCH---
WP_004189157.1 2483578 2483956 + 125NO PFAM MATCH---

Results for WP_003327055.1 back to top

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Couldn't process WP_003327055.1 Genbank filestream. May be corrupt.

Results for WP_032677795.1 back to top

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Couldn't process WP_032677795.1 Genbank filestream. May be corrupt.

Results for WP_071727890.1 [Bacillus anthracis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_071727894.1 104381 104111 - 89NO PFAM MATCH---
WP_001036560.1 104759 104399 - 119NO PFAM MATCH---
WP_001178301.1 105076 104893 - 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_001109889.1 105482 105104 - 125NO PFAM MATCH---
WP_000428510.1 105694 105484 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_267580118.1 106520 109388 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.90E-63
5.00E-55
5.00E-37
WP_071727892.1 109521 110781 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
2.80E-81
3.40E-20
3.70E-13
1.60E-04
WP_071727891.1 110907 112827 + 639NO PFAM MATCH---
WP_071727890.1 112823 114773 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-82
WP_088313356.1 114789 116331 + 513PF00881NitroreductaseNitroreductase family5.60E-13
WP_016109564.1 116422 117013 + 197INFERRED GENE---
WP_078418809.1 117455 117044 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.10E-53
WP_136444310.1 118091 117599 - 163PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
5.00E-11
4.30E-07
2.00E-05
WP_088313352.1 119527 118192 - 444PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
7.10E-64
5.80E-20
7.10E-17
3.20E-15
2.90E-10
WP_071727885.1 119724 120156 + 143NO PFAM MATCH---
WP_016128956.1 120199 120426 + 75INFERRED GENE---
WP_071727884.1 121284 120510 - 257PF13240
PF12773
zinc_ribbon_2
DZR
zinc-ribbon domain
Double zinc ribbon
9.40E-05
1.10E-04

Results for WP_014452643.1 [Caldisericum exile AZM16c01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_014452635.1 89785 90157 + 123NO PFAM MATCH---
WP_014452637.1 90779 90947 + 55NO PFAM MATCH---
WP_014452638.1 91116 92478 + 453PF04055
PF13353
PF13394
PF05402
Radical_SAM
Fer4_12
Fer4_14
PqqD
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
Coenzyme PQQ synthesis protein D (PqqD)
2.30E-17
3.30E-06
1.60E-05
3.10E-04
WP_014452639.1 92474 93719 + 414PF07690
PF05977
PF00083
MFS_1
MFS_3
Sugar_tr
Major Facilitator Superfamily
Transmembrane secretion effector
Sugar (and other) transporter
6.30E-33
5.70E-21
3.60E-05
WP_014452632.1 94473 94641 + 55NO PFAM MATCH---
WP_014452640.1 94646 94835 + 62NO PFAM MATCH---
WP_014452641.1 94989 95874 + 294PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.60E-15
2.70E-08
8.80E-07
WP_014452642.1 95966 96941 + 324PF13683
PF00665
PF13276
PF13333
rve_3
rve
HTH_21
rve_2
Integrase core domain
Integrase core domain
HTH-like domain
Integrase core domain
8.00E-17
4.70E-16
8.30E-13
1.10E-07
WP_014452643.1 97330 98782 + 483PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.90E-42
WP_014452644.1 99107 100079 + 323NO PFAM MATCH---
WP_156785878.1 100092 100863 + 256NO PFAM MATCH---
WP_014452646.1 100852 101674 + 273PF00881
PF14512
Nitroreductase
TM1586_NiRdase
Nitroreductase family
Putative TM nitroreductase
1.80E-22
1.30E-05
WP_014452647.1 101684 102611 + 308PF00005
PF13304
PF02463
PF13175
PF13476
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_23
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain
1.30E-24
1.10E-18
7.20E-06
7.50E-06
6.00E-05
WP_014452648.1 102600 103353 + 250PF01061ABC2_membraneABC-2 type transporter1.10E-09
WP_014452649.1 103353 103791 + 145PF02163Peptidase_M50Peptidase family M505.20E-13
WP_014452651.1 104313 105021 + 235PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like3.80E-16
WP_014452652.1 105219 105621 + 133PF13683
PF13333
rve_3
rve_2
Integrase core domain
Integrase core domain
6.70E-18
5.80E-05

Results for WP_073350026.1 [Aeromonas sp. QDB41] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_073350013.1 625063 623968 - 364PF00005
PF13304
PF08402
PF09818
PF02463
ABC_tran
AAA_21
TOBE_2
ABC_ATPase
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
TOBE domain
ATPase of the ABC class
RecF/RecN/SMC N terminal domain
6.00E-33
5.20E-08
1.00E-07
7.00E-06
5.90E-05
WP_073350015.1 626351 625331 - 339PF13343
PF13416
PF01547
PF13531
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
Bacterial extracellular solute-binding protein
4.20E-29
7.70E-19
3.20E-15
6.40E-14
WP_026141379.1 627179 626471 - 235PF07702
PF00392
UTRA
GntR
UTRA domain
Bacterial regulatory proteins, gntR family
1.50E-34
1.60E-19
WP_073350019.1 627420 628563 + 380PF00266Aminotran_5Aminotransferase class-V3.40E-22
WP_073350021.1 628559 629984 + 474PF00202Aminotran_3Aminotransferase class-III1.40E-78
WP_073350023.1 629976 630816 + 279PF00702
PF12710
Hydrolase
HAD
haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
4.00E-05
9.10E-05
WP_016350517.1 633221 630938 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.60E-201
4.70E-43
WP_011705812.1 634115 633266 - 282PF01226Form_Nir_transFormate/nitrite transporter1.50E-73
WP_073350026.1 636256 634495 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-78
5.10E-65
WP_011705814.1 636698 636383 - 104PF00893Multi_Drug_ResSmall Multidrug Resistance protein1.50E-29
WP_073350028.1 637037 638153 + 371PF02774
PF01118
Semialdhyde_dhC
Semialdhyde_dh
Semialdehyde dehydrogenase, dimerisation domain
Semialdehyde dehydrogenase, NAD binding domain
1.40E-58
1.00E-22
WP_073350030.1 638770 641548 + 925PF05193
PF00675
Peptidase_M16_C
Peptidase_M16
Peptidase M16 inactive domain
Insulinase (Peptidase family M16)
8.80E-36
1.00E-23
WP_073350032.1 642806 641642 - 387PF01053
PF00155
PF03841
PF00266
Cys_Met_Meta_PP
Aminotran_1_2
SelA
Aminotran_5
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class I and II
L-seryl-tRNA selenium transferase
Aminotransferase class-V
3.90E-134
2.20E-06
1.00E-04
2.70E-04
WP_073350034.1 643985 642914 - 356PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
5.90E-33
6.70E-19
WP_073350037.1 645084 644445 - 212PF13460
PF05368
PF03435
PF01370
PF01073
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Epimerase
3Beta_HSD
NAD(P)H-binding
NmrA-like family
Saccharopine dehydrogenase NADP binding domain
NAD dependent epimerase/dehydratase family
3-beta hydroxysteroid dehydrogenase/isomerase family
1.00E-26
2.60E-09
3.20E-07
1.10E-06
4.80E-04
WP_011705820.1 645185 646091 + 301PF03466
PF00126
PF13556
LysR_substrate
HTH_1
HTH_30
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
PucR C-terminal helix-turn-helix domain
3.00E-40
3.50E-22
3.40E-04
WP_073350038.1 646957 646216 - 246PF13561
PF00106
PF08659
PF01370
PF13460
adh_short_C2
adh_short
KR
Epimerase
NAD_binding_10
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
NAD(P)H-binding
1.40E-56
8.30E-55
3.90E-18
1.10E-07
1.00E-04

Results for WP_019098919.1 [Pseudomonas monteilii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_019098910.1 248846 247931 - 304PF02653BPD_transp_2Branched-chain amino acid transport system / permease component4.60E-50
WP_025752459.1 250137 249000 - 378PF13458
PF01094
PF13433
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Periplasmic binding protein
Receptor family ligand binding region
Periplasmic binding protein domain
2.70E-67
3.40E-25
9.00E-19
WP_019098912.1 250586 251792 + 401PF04095
PF17767
NAPRTase
NAPRTase_N
Nicotinate phosphoribosyltransferase (NAPRTase) family
Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
3.60E-69
3.20E-31
WP_019098913.1 251795 252623 + 275PF02540NAD_synthaseNAD synthase1.20E-63
WP_025752457.1 253106 252656 - 149PF00127
PF13473
Copper-bind
Cupredoxin_1
Copper binding proteins, plastocyanin/azurin family
Cupredoxin-like domain
2.80E-27
1.80E-04
WP_019098915.1 253455 254043 + 195PF03641
PF18306
Lysine_decarbox
LDcluster4
Possible lysine decarboxylase
SLOG cluster4 family
2.40E-42
7.50E-18
WP_025752453.1 256387 254086 - 766PF08497
PF11842
PF04055
Radical_SAM_N
DUF3362
Radical_SAM
Radical SAM N-terminal
Domain of unknown function (DUF3362)
Radical SAM superfamily
9.40E-145
3.80E-51
2.60E-22
WP_025752451.1 256838 256634 - 67PF11275DUF3077Protein of unknown function (DUF3077)3.90E-06
WP_019098919.1 257485 258640 + 384PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.20E-21
WP_019098920.1 258641 260309 + 555PF00005
PF00664
PF02463
PF13191
PF13304
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_21
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA ATPase domain
AAA domain, putative AbiEii toxin, Type IV TA system
7.10E-19
2.80E-08
2.90E-05
2.30E-04
3.70E-04
WP_025752446.1 261822 260424 - 465PF03796
PF00772
PF13481
PF06745
PF13671
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
DnaB-like helicase C terminal domain
DnaB-like helicase N terminal domain
AAA domain
KaiC
AAA domain
1.60E-113
3.30E-36
1.80E-12
4.80E-08
1.20E-04
WP_003249568.1 262382 261935 - 148PF03948
PF01281
Ribosomal_L9_C
Ribosomal_L9_N
Ribosomal protein L9, C-terminal domain
Ribosomal protein L9, N-terminal domain
1.30E-27
5.60E-19
WP_019098921.1 263266 262402 - 287NO PFAM MATCH---
WP_003249563.1 263530 263299 - 76PF01084Ribosomal_S18Ribosomal protein S184.90E-24
WP_003249557.1 263984 263558 - 141PF01250Ribosomal_S6Ribosomal protein S62.20E-25
WP_016712311.1 265038 264291 - 248PF00588
PF08032
SpoU_methylase
SpoU_sub_bind
SpoU rRNA Methylase family
RNA 2'-O ribose methyltransferase substrate binding
1.90E-39
2.00E-21
WP_019098922.1 267620 265034 - 861PF00773
PF17876
PF08206
PF00575
PF08461
RNB
CSD2
OB_RNB
S1
HTH_12
RNB domain
Cold shock domain
Ribonuclease B OB domain
S1 RNA binding domain
Ribonuclease R winged-helix domain
1.80E-105
6.90E-24
6.80E-22
1.20E-13
2.60E-08

Results for WP_005159893.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005159893.1 1942 175 - 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-81
1.20E-64
WP_005159895.1 2090 3128 + 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.90E-61
2.20E-26
WP_005159898.1 3274 3967 + 230PF04239DUF421Protein of unknown function (DUF421)7.10E-16
WP_005159900.1 4173 5259 + 361PF00266Aminotran_5Aminotransferase class-V1.00E-66
WP_005159903.1 5385 6672 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.40E-148
WP_005159905.1 6910 7603 + 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.40E-81
8.30E-07
1.60E-04
2.80E-04
WP_004391091.1 7771 9445 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_005159907.1 9508 9793 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.10E-28
8.20E-07
WP_023160775.1 10129 12415 + 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.40E-52
4.00E-20
1.30E-08

Results for WP_005165676.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005177252.1 685 886 + 66NO PFAM MATCH---
WP_005165661.1 1198 1735 + 178PF13505
PF06316
OMP_b-brl
Ail_Lom
Outer membrane protein beta-barrel domain
Enterobacterial Ail/Lom protein
4.10E-31
6.40E-25
WP_011817033.1 1890 3106 + 405INFERRED GENE---
WP_005165667.1 3363 3171 - 63PF13980UPF0370Uncharacterised protein family (UPF0370)2.30E-35
WP_013650262.1 4102 3397 - 234PF02557VanYD-alanyl-D-alanine carboxypeptidase9.00E-37
WP_005165671.1 5232 4104 - 375PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
7.40E-43
2.00E-24
WP_005165673.1 5656 5233 - 140PF03960ArsCArsC family2.80E-15
WP_005165675.1 6292 5818 - 157PF13432
PF12688
PF07719
PF00515
PF13181
TPR_16
TPR_5
TPR_2
TPR_1
TPR_8
Tetratricopeptide repeat
Tetratrico peptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-15
6.50E-15
8.60E-11
2.20E-10
9.00E-10
WP_005165676.1 7966 6751 - 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-24

Results for WP_005159893.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005159893.1 1942 175 - 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-81
1.20E-64
WP_005159895.1 2090 3128 + 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.90E-61
2.20E-26
WP_005159898.1 3274 3967 + 230PF04239DUF421Protein of unknown function (DUF421)7.10E-16
WP_005159900.1 4173 5259 + 361PF00266Aminotran_5Aminotransferase class-V1.00E-66
WP_005159903.1 5385 6672 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.40E-148
WP_005159905.1 6910 7603 + 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.40E-81
8.30E-07
1.60E-04
2.80E-04
WP_004391091.1 7771 9445 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_005159907.1 9508 9793 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.10E-28
8.20E-07
WP_023160775.1 10129 12415 + 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.40E-52
4.00E-20
1.30E-08

Results for WP_005165676.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005177252.1 685 886 + 66NO PFAM MATCH---
WP_005165661.1 1198 1735 + 178PF13505
PF06316
OMP_b-brl
Ail_Lom
Outer membrane protein beta-barrel domain
Enterobacterial Ail/Lom protein
4.10E-31
6.40E-25
WP_011817033.1 1890 3106 + 405INFERRED GENE---
WP_005165667.1 3363 3171 - 63PF13980UPF0370Uncharacterised protein family (UPF0370)2.30E-35
WP_013650262.1 4102 3397 - 234PF02557VanYD-alanyl-D-alanine carboxypeptidase9.00E-37
WP_005165671.1 5232 4104 - 375PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
7.40E-43
2.00E-24
WP_005165673.1 5656 5233 - 140PF03960ArsCArsC family2.80E-15
WP_005165675.1 6292 5818 - 157PF13432
PF12688
PF07719
PF00515
PF13181
TPR_16
TPR_5
TPR_2
TPR_1
TPR_8
Tetratricopeptide repeat
Tetratrico peptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-15
6.50E-15
8.60E-11
2.20E-10
9.00E-10
WP_005165676.1 7966 6751 - 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-24

Results for WP_049527570.1 back to top

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Couldn't process WP_049527570.1 Genbank filestream. May be corrupt.

Results for WP_049527101.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_069009330.1 2863381 2861095 - 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
7.90E-52
4.00E-20
1.30E-08
WP_005159907.1 2864002 2863717 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.10E-28
8.20E-07
WP_004391091.1 2865739 2864065 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_005159905.1 2866600 2865907 - 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.40E-81
8.30E-07
1.60E-04
2.80E-04
WP_049527093.1 2868125 2866838 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)5.10E-149
WP_049527095.1 2869337 2868251 - 361PF00266Aminotran_5Aminotransferase class-V5.30E-67
WP_020283037.1 2870236 2869543 - 230PF04239DUF421Protein of unknown function (DUF421)7.40E-16
WP_005159895.1 2871420 2870382 - 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.90E-61
2.20E-26
WP_049527101.1 2871568 2873335 + 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.80E-80
1.20E-64
WP_002224869.1 2873507 2873576 + 23INFERRED GENE---
WP_005166519.1 2874059 2874917 + 285PF01226Form_Nir_transFormate/nitrite transporter4.20E-74
WP_005166521.1 2874969 2877252 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.40E-205
1.30E-43
WP_069009333.1 2877330 2878071 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.20E-31
1.50E-18
3.80E-06
WP_023160777.1 2879297 2878148 - 382PF07690
PF06779
PF12832
PF00083
MFS_1
MFS_4
MFS_1_like
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
3.00E-25
2.60E-07
2.50E-05
1.00E-04
WP_005054087.1 2879615 2880819 + 401INFERRED GENE---
WP_011816205.1 2880878 2881841 + 321INFERRED GENE---
WP_005162747.1 2883575 2882282 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.80E-35
4.90E-30

Results for WP_004150842.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_005159893.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005159893.1 1942 175 - 588PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.40E-81
1.20E-64
WP_005159895.1 2090 3128 + 345PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.90E-61
2.20E-26
WP_005159898.1 3274 3967 + 230PF04239DUF421Protein of unknown function (DUF421)7.10E-16
WP_005159900.1 4173 5259 + 361PF00266Aminotran_5Aminotransferase class-V1.00E-66
WP_005159903.1 5385 6672 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.40E-148
WP_005159905.1 6910 7603 + 230PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.40E-81
8.30E-07
1.60E-04
2.80E-04
WP_004391091.1 7771 9445 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-97
2.00E-11
7.70E-07
WP_005159907.1 9508 9793 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
3.10E-28
8.20E-07
WP_023160775.1 10129 12415 + 761PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
4.40E-52
4.00E-20
1.30E-08

Results for WP_005165676.1 [Yersinia enterocolitica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005177252.1 685 886 + 66NO PFAM MATCH---
WP_005165661.1 1198 1735 + 178PF13505
PF06316
OMP_b-brl
Ail_Lom
Outer membrane protein beta-barrel domain
Enterobacterial Ail/Lom protein
4.10E-31
6.40E-25
WP_011817033.1 1890 3106 + 405INFERRED GENE---
WP_005165667.1 3363 3171 - 63PF13980UPF0370Uncharacterised protein family (UPF0370)2.30E-35
WP_013650262.1 4102 3397 - 234PF02557VanYD-alanyl-D-alanine carboxypeptidase9.00E-37
WP_005165671.1 5232 4104 - 375PF01546
PF07687
Peptidase_M20
M20_dimer
Peptidase family M20/M25/M40
Peptidase dimerisation domain
7.40E-43
2.00E-24
WP_005165673.1 5656 5233 - 140PF03960ArsCArsC family2.80E-15
WP_005165675.1 6292 5818 - 157PF13432
PF12688
PF07719
PF00515
PF13181
TPR_16
TPR_5
TPR_2
TPR_1
TPR_8
Tetratricopeptide repeat
Tetratrico peptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
1.70E-15
6.50E-15
8.60E-11
2.20E-10
9.00E-10
WP_005165676.1 7966 6751 - 404PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.00E-24

Results for WP_004188975.1 back to top

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Couldn't process WP_004188975.1 Genbank filestream. May be corrupt.

Results for WP_003407188.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003407188.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003407188.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_010329917.1 back to top

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Couldn't process WP_010329917.1 Genbank filestream. May be corrupt.

Results for WP_000194829.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003224337.1 [Pseudomonas sp. MWU12-2020] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_146774721.1 103300 102448 - 283NO PFAM MATCH---
WP_103485913.1 103961 104948 + 328PF12833
PF00165
PF14525
HTH_18
HTH_AraC
AraC_binding_2
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
AraC-binding-like domain
1.90E-21
2.80E-08
9.10E-08
WP_247868535.1 105146 106670 + 507PF00563
PF12792
EAL
CSS-motif
EAL domain
CSS motif domain associated with EAL
4.70E-69
2.60E-19
WP_103485911.1 108722 106802 - 639PF13350
PF03797
Y_phosphatase3
Autotransporter
Tyrosine phosphatase family
Autotransporter beta-domain
2.20E-57
4.90E-33
WP_103485910.1 109533 109044 - 162PF13671
PF13238
PF01712
PF07931
AAA_33
AAA_18
dNK
CPT
AAA domain
AAA domain
Deoxynucleoside kinase
Chloramphenicol phosphotransferase-like protein
6.20E-27
1.00E-05
1.50E-05
8.90E-04
WP_177434777.1 109621 109903 + 93PF13827DUF4189Domain of unknown function (DUF4189)5.30E-04
WP_103485908.1 110008 110845 + 278PF13561
PF00106
PF08659
PF03435
adh_short_C2
adh_short
KR
Sacchrp_dh_NADP
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
Saccharopine dehydrogenase NADP binding domain
1.00E-32
9.60E-15
1.60E-07
3.30E-06
WP_103485907.1 111294 110853 - 146NO PFAM MATCH---
WP_003224337.1 113670 111465 - 734PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
8.90E-72
1.00E-71
8.20E-08
WP_003224336.1 113908 115411 + 500PF00083
PF07690
PF08946
Sugar_tr
MFS_1
Osmo_CC
Sugar (and other) transporter
Major Facilitator Superfamily
Osmosensory transporter coiled coil
3.70E-63
8.20E-39
3.10E-21
WP_103485923.1 115536 116772 + 411PF07690
PF12832
MFS_1
MFS_1_like
Major Facilitator Superfamily
MFS_1 like family
2.20E-38
1.50E-12
WP_103485922.1 116868 117804 + 311PF07859
PF20434
PF00135
PF12697
Abhydrolase_3
BD-FAE
COesterase
Abhydrolase_6
alpha/beta hydrolase fold
BD-FAE
Carboxylesterase family
Alpha/beta hydrolase family
2.30E-43
5.30E-13
7.50E-06
8.70E-05

Results for WP_016446375.1 back to top

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No results in nuccore db for value obtained from protein db

Results for WP_001516111.1 [Escherichia marmotae] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_258291640.1 76794 74529 - 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
2.70E-52
2.10E-19
4.30E-04
WP_000167336.1 77284 76999 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000140327.1 79117 77443 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
7.70E-101
6.10E-12
4.00E-07
WP_001516113.1 79911 79227 - 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
9.60E-85
2.20E-07
3.00E-04
9.70E-04
WP_001516112.1 80848 80083 - 254PF01435Peptidase_M48Peptidase family M482.10E-26
WP_000445220.1 82300 81016 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-152
WP_000057146.1 83460 82371 - 362PF00266Aminotran_5Aminotransferase class-V4.00E-76
WP_000642842.1 84350 83657 - 230PF04239DUF421Protein of unknown function (DUF421)1.00E-15
WP_001516111.1 84479 86240 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-84
7.90E-67
WP_000642551.1 86646 87504 + 285PF01226Form_Nir_transFormate/nitrite transporter1.10E-74
WP_001292821.1 87558 89841 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.90E-209
1.60E-43
WP_000468308.1 90379 90160 - 72PF04606Ogr_DeltaOgr/Delta-like zinc finger2.10E-21
WP_258291641.1 91624 90460 - 387PF05954Phage_GPDPhage tail baseplate hub (GPD)8.10E-50
WP_047661785.1 92103 91623 - 159PF06995Phage_P2_GpUPhage P2 GpU3.90E-44
WP_258291642.1 94565 92117 - 815PF10145PhageMin_TailPhage-related minor tail protein2.00E-37
WP_000785970.1 94677 94557 - 39PF06528Phage_P2_GpEPhage P2 GpE2.30E-23
WP_001031303.1 94985 94709 - 91PF10109Phage_TAC_7Phage tail assembly chaperone proteins, E, or 41 or 144.60E-10

Results for WP_001313708.1 [Escherichia coli TA206] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000850287.1 773117 775562 + 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
4.30E-114
1.70E-29
4.30E-18
WP_000213106.1 775572 776190 + 205PF13247
PF00037
PF12797
PF13187
PF12837
Fer4_11
Fer4
Fer4_2
Fer4_9
Fer4_6
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
1.80E-29
8.80E-13
1.30E-12
2.10E-12
2.80E-11
WP_000534663.1 776191 777055 + 287PF04976DmsCDMSO reductase anchor subunit (DmsC)3.10E-122
WP_000165876.1 777717 777090 - 208PF00857IsochorismataseIsochorismatase family6.30E-22
WP_000109282.1 778030 779179 + 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
2.60E-27
1.30E-09
3.10E-07
9.60E-04
WP_000111043.1 780016 779275 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
7.20E-32
1.60E-18
2.80E-06
NP_415423.1 780207 782491 + 761INFERRED GENE---
WP_000642546.1 783403 782545 - 285PF01226Form_Nir_transFormate/nitrite transporter9.00E-75
WP_001313708.1 785569 783808 - 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.20E-83
1.50E-66
NP_415426.1 785698 786390 + 230INFERRED GENE---
WP_000057158.1 786588 787677 + 362PF00266Aminotran_5Aminotransferase class-V1.70E-76
WP_000445241.1 787747 789031 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.90E-151
WP_001313710.1 789200 789965 + 254PF01435Peptidase_M48Peptidase family M483.60E-26
WP_000125016.1 790137 790821 + 227PF02224
PF13189
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
ABC transporter
4.30E-85
2.20E-07
2.80E-04
9.40E-04
WP_005123560.1 790930 792602 + 557INFERRED GENE---
WP_000167336.1 792761 793046 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.50E-30
7.40E-08
1.30E-04
WP_000705729.1 793251 795516 + 754PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
3.60E-51
1.10E-19
9.70E-06

Results for WP_001305927.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_003491688.1 [Clostridium sporogenes] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032883737.1 6573 5922 - 216PF00072
PF00196
PF08281
PF13412
Response_reg
GerE
Sigma70_r4_2
HTH_24
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
4.00E-24
1.80E-17
9.60E-05
8.50E-04
WP_003491673.1 7812 6720 - 363PF07730HisKA_3Histidine kinase2.60E-15
WP_003491675.1 8713 8062 - 216PF02163Peptidase_M50Peptidase family M503.80E-12
WP_003491678.1 10098 8955 - 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.40E-37
1.00E-25
2.30E-14
WP_003491680.1 11224 10099 - 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
2.80E-32
8.40E-24
2.00E-17
3.10E-05
WP_003491682.1 12168 11235 - 310PF00005
PF13304
PF13555
ABC_tran
AAA_21
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
1.10E-34
1.80E-10
8.70E-04
WP_003491684.1 13058 12329 - 242PF19393DUF5968Family of unknown function (DUF5968)2.30E-60
WP_003491686.1 13704 13065 - 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.10E-10
WP_003491688.1 15037 13678 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-49
WP_003491690.1 16135 15052 - 360NO PFAM MATCH---
WP_225722656.1 17082 16137 - 314PF00881NitroreductaseNitroreductase family9.00E-21
WP_003359769.1 17438 17264 - 57NO PFAM MATCH---
WP_003491693.1 18774 17757 - 338NO PFAM MATCH---
WP_003491694.1 19788 18783 - 334PF09992NAGPAPhosphodiester glycosidase3.30E-48

Results for WP_004150842.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_001307086.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_044549523.1 [Serratia liquefaciens FK01] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_044549510.1 948334 948952 + 205PF13247
PF00037
PF13187
PF12797
PF12838
Fer4_11
Fer4
Fer4_9
Fer4_2
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4.10E-28
3.40E-13
8.80E-13
1.10E-12
6.50E-12
WP_044549511.1 948953 949281 + 109PF04976DmsCDMSO reductase anchor subunit (DmsC)1.60E-43
WP_044549514.1 949300 949772 + 156PF04976DmsCDMSO reductase anchor subunit (DmsC)3.60E-42
WP_044549517.1 949824 950442 + 205PF02613Nitrate_red_delNitrate reductase delta subunit3.10E-27
WP_013812288.1 950614 951760 + 382INFERRED GENE---
WP_044549519.1 952553 951812 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
3.60E-30
1.30E-18
5.70E-06
WP_044549521.1 955140 952857 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.10E-207
2.30E-43
WP_020826123.1 956055 955194 - 286PF01226Form_Nir_transFormate/nitrite transporter2.20E-74
WP_044549523.1 958274 956510 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.30E-81
3.00E-66
WP_044549525.1 958422 959469 + 348PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
4.70E-64
2.00E-26
WP_044549527.1 959752 960838 + 361PF00266Aminotran_5Aminotransferase class-V2.50E-63
WP_044549529.1 960953 962240 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.70E-150
WP_044549532.1 962517 963207 + 229PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.10E-82
4.70E-08
3.60E-05
1.30E-04
WP_020826130.1 963388 965062 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
8.50E-98
8.80E-12
6.00E-07
WP_004942652.1 965125 965410 + 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
4.60E-28
2.40E-07
WP_197022784.1 965695 967960 + 754PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
2.40E-53
7.20E-19
6.20E-12
1.00E-05
WP_044549536.1 967995 969744 + 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
3.10E-56
6.50E-36
2.10E-10
2.10E-05
4.30E-05

Results for WP_021182600.1 [Pantoea sp. AS-PWVM4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_021182592.1 368658 372027 + 1122PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.60E-74
1.80E-43
4.20E-29
1.60E-27
2.90E-05
WP_021182593.1 372202 372814 + 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
2.80E-59
2.40E-05
WP_021182594.1 372821 374171 + 449PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
1.70E-63
4.30E-24
3.30E-17
1.70E-14
4.30E-07
WP_021182595.1 374264 375557 + 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
4.80E-37
2.50E-32
WP_036624587.1 375870 377022 + 383PF07690
PF06779
PF00083
PF13347
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_2
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS/sugar transport protein
MFS_1 like family
3.50E-29
6.00E-11
1.40E-06
2.30E-04
2.40E-04
WP_021182597.1 377833 377092 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.30E-31
1.80E-17
1.40E-05
WP_021182598.1 380273 377987 - 761PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.70E-203
2.80E-43
WP_021182599.1 381207 380346 - 286PF01226Form_Nir_transFormate/nitrite transporter1.30E-73
WP_021182600.1 383323 381559 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
8.20E-82
1.60E-67
WP_021182601.1 383637 384723 + 361PF00266Aminotran_5Aminotransferase class-V6.40E-65
WP_021182602.1 384806 386093 + 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)3.10E-149
WP_021182603.1 386292 386973 + 226PF02224
PF13189
PF13207
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
3.30E-82
2.70E-08
5.90E-04
6.00E-04
8.40E-04
WP_021182604.1 387096 388770 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
4.30E-98
1.50E-12
3.90E-07
WP_013508512.1 388856 389141 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.00E-29
1.30E-07
9.80E-04
WP_021182606.1 389336 391595 + 752PF03772
PF00753
PF13567
Competence
Lactamase_B
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
8.40E-53
5.20E-16
1.60E-06
WP_021182607.1 391629 393378 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
4.50E-58
1.30E-34
8.80E-11
6.70E-07
1.80E-04
WP_021182608.1 393374 394376 + 333PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase1.70E-117

Results for WP_001295344.1 back to top

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Any response failure from Entrez database (error on database side)

Results for WP_000192999.1 [Bacillus wiedmannii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_000650102.1 1229092 1229878 + 261PF13240
PF12773
PF13248
PF10571
zinc_ribbon_2
DZR
zf-ribbon_3
UPF0547
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
Uncharacterised protein family UPF0547
2.70E-06
9.20E-06
5.90E-04
8.90E-04
WP_064473092.1 1229897 1231133 + 411PF13308
PF13240
PF13248
YARHG
zinc_ribbon_2
zf-ribbon_3
YARHG domain
zinc-ribbon domain
zinc-ribbon domain
2.50E-23
1.90E-08
7.20E-05
WP_048567043.1 1231600 1231171 - 142NO PFAM MATCH---
WP_151035337.1 1231799 1233134 + 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
1.10E-64
1.90E-20
1.90E-17
1.90E-15
8.80E-11
WP_048567045.1 1233234 1233723 + 162PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.20E-10
2.40E-07
6.40E-05
WP_000996803.1 1233962 1234373 + 136PF13048DUF3908Protein of unknown function (DUF3908)3.30E-52
WP_002158829.1 1234404 1234995 + 197INFERRED GENE---
WP_001175527.1 1236629 1235087 - 513PF00881NitroreductaseNitroreductase family9.50E-13
WP_000192999.1 1238595 1236645 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.40E-84
WP_001061543.1 1240511 1238591 - 639NO PFAM MATCH---
WP_000569890.1 1241896 1240636 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.20E-81
3.20E-20
5.00E-13
1.80E-04
WP_000197131.1 1244896 1242028 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
1.90E-63
5.10E-55
1.90E-36
WP_000428505.1 1245720 1245936 + 71PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.70E-17
4.20E-10
1.20E-06
4.20E-05
7.40E-05
WP_001109891.1 1245932 1246310 + 125NO PFAM MATCH---
WP_001178300.1 1246338 1246521 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_151035338.1 1246655 1247015 + 119NO PFAM MATCH---
WP_001195374.1 1247033 1247303 + 89NO PFAM MATCH---

Results for WP_000192994.1 back to top

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Couldn't process WP_000192994.1 Genbank filestream. May be corrupt.

Results for WP_042389992.1 [Cronobacter sakazakii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004387352.1 86623 84874 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
2.50E-60
1.40E-35
1.60E-10
2.10E-05
2.10E-04
WP_263009033.1 88909 86659 - 749PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
1.70E-53
1.40E-17
9.80E-12
7.20E-04
WP_004387353.1 89407 89122 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
1.90E-29
7.30E-08
1.00E-04
WP_004387354.1 91195 89521 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.80E-99
3.40E-12
3.30E-07
WP_007866476.1 91993 91306 - 228PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
2.90E-85
9.80E-08
8.10E-05
2.10E-04
6.40E-04
WP_007898166.1 93456 92169 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.70E-150
WP_004387356.1 94610 93524 - 361PF00266Aminotran_5Aminotransferase class-V4.30E-71
WP_004387357.1 95465 94772 - 230PF04239DUF421Protein of unknown function (DUF421)3.50E-16
WP_042389992.1 95606 97370 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.90E-84
3.90E-67
WP_228514990.1 97731 98631 + 299PF01226Form_Nir_transFormate/nitrite transporter6.10E-75
WP_004387360.1 98682 100965 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
3.50E-209
5.30E-44
WP_007782507.1 101160 101901 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.00E-32
8.00E-19
2.80E-06
WP_007898175.1 103083 101934 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
9.90E-26
5.70E-10
4.60E-05
5.40E-04
WP_007866459.1 104670 103377 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.20E-37
1.60E-33
WP_202622880.1 106053 104766 - 428PF12002
PF16193
PF00004
PF05496
PF01078
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
Magnesium chelatase, subunit ChlI
1.80E-65
2.80E-23
9.00E-17
6.80E-14
9.00E-07
WP_007898179.1 106737 106122 - 204PF03548LolAOuter membrane lipoprotein carrier protein LolA1.40E-58
WP_029038925.1 111099 106926 - 1390PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
2.20E-74
4.10E-42
3.20E-28
5.90E-28
5.50E-05

Results for WP_069604603.1 [Bacillus sp. AS_5] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_001171895.1 463426 463267 - 52NO PFAM MATCH---
WP_001036583.1 463899 463536 - 120NO PFAM MATCH---
WP_001178291.1 464214 464031 - 60PF13121DUF3976Domain of unknown function (DUF3976)8.70E-27
WP_001109902.1 464620 464242 - 125NO PFAM MATCH---
WP_000428506.1 464832 464622 - 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_000197161.1 465655 468523 + 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.20E-55
1.20E-36
WP_000569922.1 468656 469916 + 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_001061566.1 470040 471960 + 639NO PFAM MATCH---
WP_069604603.1 471956 473906 + 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-84
WP_001175550.1 473921 475463 + 513PF00881NitroreductaseNitroreductase family1.90E-12
WP_000996781.1 475904 475493 - 136PF13048DUF3908Protein of unknown function (DUF3908)2.20E-52
WP_001110231.1 477399 476064 - 444PF07992
PF00070
PF13738
PF02852
PF03486
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
HI0933_like
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
HI0933-like protein
2.40E-64
2.30E-20
6.40E-17
1.70E-15
3.40E-10
WP_266001119.1 477598 478027 + 142NO PFAM MATCH---
WP_266001121.1 479301 478065 - 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
3.10E-22
8.70E-04
WP_266001123.1 480106 479320 - 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
8.10E-06
7.80E-04
WP_000424524.1 480302 481136 + 277NO PFAM MATCH---
WP_266001126.1 481834 481150 - 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)1.50E-74

Results for WP_024087295.1 [Pseudomonas sp. CES] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_013973005.1 1362 18 - 447PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
3.20E-24
1.10E-22
WP_013973004.1 3629 1379 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
2.80E-33
7.70E-31
WP_003259224.1 4084 3628 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.30E-22
3.80E-08
4.70E-05
WP_024087295.1 4473 6660 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.70E-73
5.30E-72
4.70E-08
WP_024087294.1 6875 7688 + 270PF08241
PF13649
PF01209
PF13847
PF13489
Methyltransf_11
Methyltransf_25
Ubie_methyltran
Methyltransf_31
Methyltransf_23
Methyltransferase domain
Methyltransferase domain
ubiE/COQ5 methyltransferase family
Methyltransferase domain
Methyltransferase domain
3.90E-23
2.90E-22
3.60E-16
1.80E-14
2.10E-09
WP_003260568.1 8005 7705 - 99PF13827DUF4189Domain of unknown function (DUF4189)6.90E-05
WP_024087293.1 10355 8225 - 709PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.20E-55
1.90E-23
WP_013973000.1 10583 11165 + 193NO PFAM MATCH---
WP_023661742.1 11574 12093 + 172PF04657DMT_YdcZPutative inner membrane exporter, YdcZ4.10E-39
WP_013972998.1 13002 12093 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
2.00E-26
9.20E-16
WP_013972997.1 13454 14429 + 324PF00107
PF13602
PF08240
ADH_zinc_N
ADH_zinc_N_2
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
4.70E-20
3.00E-18
8.40E-08
WP_024087292.1 14470 15370 + 299PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.80E-40
3.30E-07

Results for WP_050042797.1 [Burkholderia pseudomallei] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004189296.1 2813407 2812165 - 413PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
5.60E-26
1.70E-18
7.60E-10
WP_011851073.1 2813425 2813775 + 116INFERRED GENE---
WP_004526105.1 2813741 2814392 + 216PF13673Acetyltransf_10Acetyltransferase (GNAT) domain1.80E-04
WP_038748137.1 2814388 2815981 + 530PF01050
PF00483
PF07883
PF12804
MannoseP_isomer
NTP_transferase
Cupin_2
NTP_transf_3
Mannose-6-phosphate isomerase
Nucleotidyl transferase
Cupin domain
MobA-like NTP transferase domain
2.80E-72
2.30E-50
7.30E-09
1.30E-04
WP_038731908.1 2816015 2817212 + 398PF00534
PF13692
PF13439
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
4.00E-16
1.10E-13
5.50E-05
WP_004526102.1 2817288 2818557 + 422PF01943
PF13440
PF14667
Polysacc_synt
Polysacc_synt_3
Polysacc_synt_C
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis C-terminal domain
1.80E-31
2.80E-08
1.90E-04
WP_050042796.1 2821111 2818747 - 787PF00563
PF00990
EAL
GGDEF
EAL domain
Diguanylate cyclase, GGDEF domain
1.60E-58
6.60E-33
WP_004522828.1 2822370 2821593 - 258PF00596Aldolase_IIClass II Aldolase and Adducin N-terminal domain4.20E-41
WP_050042797.1 2824731 2822439 - 763PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.80E-93
WP_004189426.1 2825185 2824822 - 120NO PFAM MATCH---
WP_004196290.1 2825549 2825186 - 120NO PFAM MATCH---
DP49_RS16395 2825545 2829384 + 1279INFERRED GENE---
WP_004190190.1 2830519 2829520 - 332PF00498
PF16697
FHA
Yop-YscD_cpl
FHA domain
Inner membrane component of T3SS, cytoplasmic domain
2.70E-17
1.10E-08
WP_004522832.1 2830787 2831141 + 117NO PFAM MATCH---
WP_082263391.1 2831137 2831383 + 81NO PFAM MATCH---
WP_004530923.1 2831624 2832002 + 125NO PFAM MATCH---
WP_038761760.1 2832288 2832666 + 125NO PFAM MATCH---

Results for WP_039349113.1 [Pectobacterium fontis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005967571.1 361 76 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.80E-29
8.40E-07
9.80E-04
WP_039349096.1 2126 452 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.60E-96
5.80E-12
1.20E-06
WP_039349099.1 2919 2241 - 225PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
1.40E-81
6.20E-08
6.00E-06
7.50E-05
WP_039349106.1 4426 3136 - 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)9.50E-151
WP_039349109.1 5593 4507 - 361PF00266Aminotran_5Aminotransferase class-V1.70E-64
WP_039349113.1 5888 7652 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
5.80E-83
1.20E-68
WP_039349116.1 8091 8952 + 286PF01226Form_Nir_transFormate/nitrite transporter3.30E-74
WP_039349118.1 9009 11292 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.00E-206
1.50E-43
WP_039349119.1 11560 12301 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-30
8.50E-19
3.80E-06
WP_039349120.1 12489 12948 + 152PF01797Y1_TnpTransposase IS200 like3.10E-32
WP_039349121.1 14660 13091 - 522PF05378
PF01968
PF13941
PF06406
Hydant_A_N
Hydantoinase_A
MutL
StbA
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
1.90E-34
2.30E-31
8.30E-08
4.80E-05
WP_039349124.1 15780 14670 - 369PF06032DUF917Protein of unknown function (DUF917)2.30E-126
WP_039349127.1 17138 15806 - 443PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin1.10E-19
WP_039349129.1 17415 18351 + 311PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.90E-15
1.50E-14

Results for WP_039472679.1 [Pectobacterium carotovorum] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_010301091.1 78172 79327 + 384PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
2.40E-39
1.10E-06
1.90E-06
4.90E-05
WP_010301088.1 80254 79312 - 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-15
5.10E-14
WP_180780832.1 80527 81859 + 443PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin3.20E-18
WP_039505277.1 81885 82995 + 369PF06032DUF917Protein of unknown function (DUF917)2.20E-125
WP_180780833.1 83005 84574 + 522PF05378
PF01968
PF13941
PF06406
PF01869
Hydant_A_N
Hydantoinase_A
MutL
StbA
BcrAD_BadFG
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
BadF/BadG/BcrA/BcrD ATPase family
5.20E-34
1.20E-31
1.50E-07
3.00E-04
6.30E-04
WP_039544511.1 85405 84664 - 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-30
8.50E-19
3.80E-06
WP_039472674.1 87957 85674 - 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.80E-206
1.50E-43
WP_207189336.1 88833 88014 - 272PF01226Form_Nir_transFormate/nitrite transporter2.30E-73
WP_039472679.1 91078 89314 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.50E-83
1.40E-67
WP_039472681.1 91407 92493 + 361PF00266Aminotran_5Aminotransferase class-V1.20E-61
WP_039472682.1 92574 93864 + 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.10E-150
WP_010277170.1 94085 94763 + 225PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.10E-81
1.20E-07
6.70E-06
6.80E-05
WP_010277167.1 94879 96553 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-95
1.60E-12
3.10E-06
WP_005967571.1 96642 96927 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.80E-29
8.40E-07
9.80E-04
WP_043878173.1 97650 97086 - 187PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
4.10E-31
2.40E-15
WP_010301049.1 98489 97712 - 258PF00977
PF03060
PF01207
His_biosynth
NMO
Dus
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
8.70E-74
3.60E-05
1.50E-04
WP_010301046.1 99208 98470 - 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
1.70E-77
1.10E-07
4.00E-06
7.00E-06
1.50E-05

Results for WP_039495928.1 [Pectobacterium brasiliense] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_039276326.1 2883914 2884652 + 245PF00977
PF01207
PF03060
PF00290
PF02581
His_biosynth
Dus
NMO
Trp_syntA
TMP-TENI
Histidine biosynthesis protein
Dihydrouridine synthase (Dus)
Nitronate monooxygenase
Tryptophan synthase alpha chain
Thiamine monophosphate synthase
1.10E-77
1.40E-08
1.50E-06
1.00E-05
1.60E-05
WP_010277156.1 2884633 2885410 + 258PF00977
PF03060
PF01207
His_biosynth
NMO
Dus
Histidine biosynthesis protein
Nitronate monooxygenase
Dihydrouridine synthase (Dus)
1.20E-73
4.10E-05
1.80E-04
WP_240348758.1 2885472 2886036 + 187PF01502
PF01503
PRA-CH
PRA-PH
Phosphoribosyl-AMP cyclohydrolase
Phosphoribosyl-ATP pyrophosphohydrolase
4.10E-31
1.00E-15
WP_005967571.1 2886480 2886195 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
7.80E-29
8.40E-07
9.80E-04
WP_010277167.1 2888243 2886569 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
1.20E-95
1.60E-12
3.10E-06
WP_010277170.1 2889037 2888359 - 225PF02224
PF13189
PF13238
PF13207
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
2.10E-81
1.20E-07
6.70E-06
6.80E-05
WP_268197390.1 2890547 2889257 - 429PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.40E-150
WP_268197391.1 2891714 2890628 - 361PF00266Aminotran_5Aminotransferase class-V5.60E-62
WP_039495928.1 2892043 2893807 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.10E-83
9.00E-68
WP_014915080.1 2894245 2895103 + 285PF01226Form_Nir_transFormate/nitrite transporter1.40E-73
WP_039468965.1 2895160 2897443 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
9.20E-207
1.50E-43
WP_010277183.1 2897712 2898453 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
2.10E-30
8.50E-19
3.80E-06
WP_268197392.1 2900109 2898540 - 522PF05378
PF01968
PF13941
PF06406
PF14450
Hydant_A_N
Hydantoinase_A
MutL
StbA
FtsA
Hydantoinase/oxoprolinase N-terminal region
Hydantoinase/oxoprolinase
MutL protein
StbA protein
Cell division protein FtsA
2.80E-35
2.40E-31
2.20E-07
2.10E-04
4.00E-04
WP_268197393.1 2901229 2900119 - 369PF06032DUF917Protein of unknown function (DUF917)1.50E-126
WP_268197394.1 2902571 2901266 - 434PF02133Transp_cyt_purPermease for cytosine/purines, uracil, thiamine, allantoin3.10E-18
WP_268197395.1 2902846 2903788 + 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
3.40E-15
5.50E-14
WP_039286987.1 2904928 2903773 - 384PF07690
PF00083
PF06779
PF12832
MFS_1
Sugar_tr
MFS_4
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
1.30E-38
1.10E-06
1.90E-06
5.10E-05

Results for WP_033100938.1 [Thermoactinomyces sp. CICC 10522] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_033100941.1 211794 212439 + 214PF01470Peptidase_C15Pyroglutamyl peptidase3.60E-78
WP_052154170.1 212573 213809 + 411PF07690MFS_1Major Facilitator Superfamily3.40E-28
WP_033100940.1 214083 214701 + 205PF00440TetR_NBacterial regulatory proteins, tetR family6.60E-13
WP_232336279.1 214812 217482 + 889PF01326
PF00391
PPDK_N
PEP-utilizers
Pyruvate phosphate dikinase, AMP/ATP-binding domain
PEP-utilising enzyme, mobile domain
1.20E-96
4.70E-24
WP_198055241.1 217638 218139 + 166PF00583
PF13673
PF13420
PF13508
PF13302
Acetyltransf_1
Acetyltransf_10
Acetyltransf_4
Acetyltransf_7
Acetyltransf_3
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
6.30E-18
5.00E-15
1.10E-12
3.70E-12
2.20E-10
WP_198064401.1 218396 219200 + 267PF04962KduIKduI/IolB family5.70E-78
WP_198055243.1 219485 219707 + 73NO PFAM MATCH---
WP_198055244.1 219873 221808 + 644NO PFAM MATCH---
WP_033100938.1 221804 223748 + 647PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.10E-85
WP_198058887.1 223770 225351 + 526PF00881NitroreductaseNitroreductase family2.80E-16
WP_198055247.1 226289 225599 - 229PF01569
PF14378
PAP2
PAP2_3
PAP2 superfamily
PAP2 superfamily
1.00E-20
2.20E-06
WP_198055248.1 226533 227076 + 180PF01569
PF14378
PF14360
PAP2
PAP2_3
PAP2_C
PAP2 superfamily
PAP2 superfamily
PAP2 superfamily C-terminal
1.00E-21
1.70E-12
3.70E-04
I8U18_RS01190 227427 227961 + 178INFERRED GENE---
WP_255517811.1 227975 228491 + 171PF13490zf-HC2Putative zinc-finger3.10E-11
WP_033100933.1 228487 229336 + 282NO PFAM MATCH---
WP_198055252.1 229629 230367 + 245PF00753
PF19583
PF12706
Lactamase_B
ODP
Lactamase_B_2
Metallo-beta-lactamase superfamily
ODP family beta lactamase
Beta-lactamase superfamily domain
2.40E-21
8.10E-08
3.10E-04
WP_052154165.1 230543 231083 + 179PF00186DHFR_1Dihydrofolate reductase3.40E-55

Results for WP_015839984.1 back to top

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Couldn't process WP_015839984.1 Genbank filestream. May be corrupt.

Results for WP_054903954.1 [Pseudomonas juntendi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_054903949.1 2421409 2419660 - 582PF02028BCCTBCCT, betaine/carnitine/choline family transporter6.00E-177
WP_054903950.1 2421723 2422041 + 105NO PFAM MATCH---
WP_029887314.1 2422048 2422246 + 65PF06945DUF1289Protein of unknown function (DUF1289)2.60E-15
WP_054903951.1 2422487 2423276 + 262PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 31.50E-26
WP_235767773.1 2424317 2423297 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.30E-35
3.80E-23
WP_235767772.1 2425711 2424367 - 447PF00034
PF13442
PF09698
PF09699
Cytochrom_C
Cytochrome_CBB3
GSu_C4xC__C2xCH
Paired_CXXCH_1
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH)
Doubled CXXCH motif (Paired_CXXCH_1)
1.80E-23
1.00E-22
7.60E-04
8.70E-04
WP_054903953.1 2427978 2425728 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
8.90E-35
8.50E-32
WP_009686563.1 2428433 2427977 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
6.10E-22
3.80E-08
3.00E-05
WP_054903954.1 2428677 2430864 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.90E-73
9.60E-73
3.30E-08
WP_054904035.1 2432594 2430872 - 573PF00890
PF01266
PF12831
FAD_binding_2
DAO
FAD_oxidored
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
6.80E-95
6.70E-08
2.20E-05
WP_054904036.1 2432502 2433267 + 254PF01614
PF09339
IclR
HTH_IclR
Bacterial transcriptional regulator
IclR helix-turn-helix domain
6.10E-27
6.40E-10
WP_054903955.1 2435142 2433291 - 616PF00005
PF00664
PF02463
PF01926
PF03193
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
50S ribosome-binding GTPase
RsgA GTPase
1.60E-36
2.00E-20
1.40E-07
6.30E-05
8.60E-05
WP_260779423.1 2435534 2436401 + 288PF00701DHDPSDihydrodipicolinate synthetase family2.00E-54
WP_235767771.1 2436530 2437424 + 297PF03466
PF00126
PF18024
LysR_substrate
HTH_1
HTH_50
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
Helix-turn-helix domain
2.20E-36
1.40E-18
8.90E-04
WP_054904037.1 2438304 2437434 - 289PF00892EamAEamA-like transporter family6.80E-24
WP_235767770.1 2438426 2439809 + 460PF00155
PF00392
PF12897
Aminotran_1_2
GntR
Asp_aminotransf
Aminotransferase class I and II
Bacterial regulatory proteins, gntR family
Aspartate amino-transferase
5.00E-37
1.00E-16
3.70E-04
WP_054903959.1 2439968 2441180 + 403PF02417Chromate_transpChromate transporter3.10E-71

Results for WP_029887310.1 [Pseudomonas juntendi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_029887316.1 10349 8600 - 582PF02028BCCTBCCT, betaine/carnitine/choline family transporter3.70E-177
WP_029887315.1 10663 10981 + 105NO PFAM MATCH---
WP_029887314.1 10988 11186 + 65PF06945DUF1289Protein of unknown function (DUF1289)2.60E-15
WP_064314590.1 11427 12216 + 262PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 32.80E-26
WP_029887313.1 13257 12237 - 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
1.20E-35
3.70E-23
WP_029887312.1 14651 13307 - 447PF00034
PF13442
PF09699
Cytochrom_C
Cytochrome_CBB3
Paired_CXXCH_1
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
Doubled CXXCH motif (Paired_CXXCH_1)
1.10E-23
1.80E-22
9.30E-04
WP_029887311.1 16918 14668 - 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
9.00E-35
1.10E-31
WP_009686563.1 17373 16917 - 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
6.10E-22
3.80E-08
3.00E-05
WP_029887310.1 17616 19803 + 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
6.00E-73
7.60E-73
3.50E-08
WP_050492241.1 21539 19811 - 575PF00890
PF01266
PF12831
PF03486
PF07992
FAD_binding_2
DAO
FAD_oxidored
HI0933_like
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
4.10E-100
9.00E-12
1.40E-10
2.70E-07
7.00E-07
WP_029887308.1 21901 21580 - 106PF07978NIPSNAPNIPSNAP1.60E-37
WP_029887307.1 23619 21885 - 577PF00890
PF01266
PF12831
PF03486
PF07992
FAD_binding_2
DAO
FAD_oxidored
HI0933_like
Pyr_redox_2
FAD binding domain
FAD dependent oxidoreductase
FAD dependent oxidoreductase
HI0933-like protein
Pyridine nucleotide-disulphide oxidoreductase
1.20E-106
5.60E-12
7.40E-10
1.20E-04
2.80E-04
WP_029887306.1 24433 23623 - 269PF08501
PF00899
Shikimate_dh_N
ThiF
Shikimate dehydrogenase substrate binding domain
ThiF family
4.00E-17
1.20E-04
WP_250169835.1 24586 24981 + 131PF09339HTH_IclRIclR helix-turn-helix domain4.70E-13

Results for WP_047414124.1 back to top

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Couldn't process WP_047414124.1 Genbank filestream. May be corrupt.

Results for WP_040231802.1 [Citrobacter pasteurii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_040231809.1 3520818 3519840 - 325PF02606LpxKTetraacyldisaccharide-1-P 4'-kinase7.30E-112
WP_040231807.1 3522563 3520814 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
1.20E-60
3.20E-36
1.80E-10
4.30E-05
2.70E-04
WP_040231806.1 3524864 3522599 - 754PF03772
PF00753
PF12706
Competence
Lactamase_B
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
9.60E-49
8.80E-20
5.70E-05
WP_003035780.1 3525355 3525070 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.80E-29
5.40E-07
4.30E-04
WP_003035776.1 3527188 3525514 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.10E-100
7.50E-12
9.00E-07
WP_005123561.1 3527985 3527301 - 227PF02224
PF13189
PF00005
Cytidylate_kin
Cytidylate_kin2
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
ABC transporter
2.00E-84
2.10E-06
8.60E-04
WP_040231805.1 3529440 3528156 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.20E-150
WP_040231803.1 3530598 3529509 - 362PF00266Aminotran_5Aminotransferase class-V1.70E-69
WP_040231802.1 3531044 3532805 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-81
1.60E-67
WP_003831909.1 3533209 3534067 + 285PF01226Form_Nir_transFormate/nitrite transporter3.10E-74
WP_005123565.1 3534126 3536409 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
8.20E-208
4.70E-44
WP_003035751.1 3536594 3537335 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-32
1.30E-18
4.50E-06
WP_005123567.1 3538800 3537378 - 473PF13520
PF00324
AA_permease_2
AA_permease
Amino acid permease
Amino acid permease
3.90E-29
4.20E-13
WP_005123568.1 3540156 3539007 - 382PF07690
PF06779
PF00083
PF12832
MFS_1
MFS_4
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
MFS_1 like family
8.50E-30
2.10E-09
1.10E-07
3.80E-04
WP_005123569.1 3541351 3540487 - 287PF04976DmsCDMSO reductase anchor subunit (DmsC)2.10E-119
WP_005123570.1 3541970 3541352 - 205PF13247
PF12797
PF00037
PF13187
PF12838
Fer4_11
Fer4_2
Fer4
Fer4_9
Fer4_7
4Fe-4S dicluster domain
4Fe-4S binding domain
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
3.70E-28
5.20E-13
7.20E-13
2.90E-12
3.10E-11
WP_005123571.1 3544425 3541980 - 814PF00384
PF01568
PF04879
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Molybdopterin oxidoreductase Fe4S4 domain
2.70E-111
5.50E-29
4.40E-18

Results for WP_033145089.1 back to top

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Couldn't process WP_033145089.1 Genbank filestream. May be corrupt.

Results for WP_047359384.1 [Citrobacter braakii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_049042995.1 93152 91403 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
9.80E-61
6.00E-36
1.50E-10
1.50E-05
2.60E-05
WP_049042997.1 95453 93188 - 754PF03772
PF00753
PF12706
PF13567
Competence
Lactamase_B
Lactamase_B_2
DUF4131
Competence protein
Metallo-beta-lactamase superfamily
Beta-lactamase superfamily domain
Domain of unknown function (DUF4131)
9.10E-51
1.10E-18
3.60E-04
3.60E-04
WP_003035780.1 95944 95659 - 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
6.80E-29
5.40E-07
4.30E-04
WP_003035776.1 97778 96104 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
6.10E-100
7.50E-12
9.00E-07
WP_016152447.1 98575 97891 - 227PF02224
PF13189
PF00005
Cytidylate_kin
Cytidylate_kin2
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
ABC transporter
1.80E-84
2.70E-06
6.50E-04
WP_075847041.1 100092 98808 - 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)7.00E-150
WP_075847039.1 101249 100160 - 362PF00266Aminotran_5Aminotransferase class-V1.70E-70
WP_016156114.1 102154 101461 - 230PF04239DUF421Protein of unknown function (DUF421)7.00E-16
WP_047359384.1 102290 104051 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.10E-81
1.50E-67
WP_075552824.1 104413 105313 + 299PF01226Form_Nir_transFormate/nitrite transporter3.70E-74
WP_016152441.1 105372 107655 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
2.90E-208
4.70E-44
WP_003035751.1 107840 108581 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
6.40E-32
1.30E-18
4.50E-06
WP_047359385.1 109487 108638 - 282PF01418
PF01380
HTH_6
SIS
Helix-turn-helix domain, rpiR family
SIS domain
5.00E-15
2.10E-05
WP_016152439.1 109608 109884 + 91PF02302PTS_IIBPTS system, Lactose/Cellobiose specific IIB subunit1.30E-12
WP_016156112.1 109900 111166 + 421PF03611EIIC-GATPTS system sugar-specific permease component3.10E-120
WP_049043003.1 111178 111976 + 265PF00456
PF13292
PF00676
PF02775
PF17273
Transketolase_N
DXP_synthase_N
E1_dh
TPP_enzyme_C
DUF5338
Transketolase, thiamine diphosphate binding domain
1-deoxy-D-xylulose-5-phosphate synthase
Dehydrogenase E1 component
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Family of unknown function (DUF5338)
3.40E-42
6.60E-15
2.10E-07
4.00E-04
8.90E-04
WP_075847035.1 111975 112887 + 303PF02779
PF02780
Transket_pyr
Transketolase_C
Transketolase, pyrimidine binding domain
Transketolase, C-terminal domain
9.80E-27
3.90E-14

Results for WP_013057430.1 [Priestia megaterium] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_053487356.1 2720141 2719310 - 276NO PFAM MATCH---
WP_013057424.1 2720371 2721037 + 221PF00190
PF07883
Cupin_1
Cupin_2
Cupin
Cupin domain
1.00E-14
1.00E-05
WP_013057425.1 2721325 2721091 - 77NO PFAM MATCH---
WP_013057426.1 2721974 2721389 - 194NO PFAM MATCH---
WP_013083843.1 2722205 2722375 + 56INFERRED GENE---
WP_041816574.1 2722477 2723017 + 179PF09580Spore_YhcN_YlaJSporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)8.00E-29
WP_013057428.1 2723248 2723764 + 171PF01569
PF14378
PAP2
PAP2_3
PAP2 superfamily
PAP2 superfamily
1.10E-13
1.50E-05
WP_252298527.1 2725595 2724026 - 522PF00881NitroreductaseNitroreductase family4.40E-13
WP_013057430.1 2727559 2725618 - 646PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.40E-82
WP_013057431.1 2729508 2727555 - 650NO PFAM MATCH---
WP_080518340.1 2729964 2729688 - 91NO PFAM MATCH---
WP_252298528.1 2733691 2730595 - 1031PF00133
PF19302
PF08264
PF09334
PF01406
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA synthetases class I (I, L, M and V)
Domain of unknown function (DUF5915)
Anticodon-binding domain of tRNA ligase
tRNA synthetases class I (M)
tRNA synthetases class I (C) catalytic domain
7.50E-201
1.20E-41
1.70E-31
6.10E-21
1.10E-05
WP_252298529.1 2735062 2734075 - 328PF14267DUF4357Domain of unknown function (DUF4357)7.90E-14
WP_252298530.1 2736046 2735164 - 293PF13391HNH_2HNH endonuclease1.80E-09
WP_235565730.1 2737729 2736382 - 448PF13520AA_permease_2Amino acid permease1.10E-05
WP_013057437.1 2738237 2739194 + 318PF01734PatatinPatatin-like phospholipase3.00E-12
WP_252298531.1 2741086 2739373 - 570NO PFAM MATCH---

Results for WP_024595461.1 [Pseudoalteromonas sp. LC2018020214] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_007377323.1 3584783 3585158 + 124PF03965
PF01978
Penicillinase_R
TrmB
Penicillinase repressor
Sugar-specific transcriptional regulator TrmB
7.50E-35
4.00E-04
WP_197121530.1 3585167 3586376 + 402PF05569
PF03544
Peptidase_M56
TonB_C
BlaR1 peptidase M56
Gram-negative bacterial TonB protein C-terminal
6.30E-37
1.80E-17
WP_024605945.1 3586833 3586449 - 127PF01124MAPEGMAPEG family1.20E-20
WP_200219653.1 3587068 3587947 + 292PF00892EamAEamA-like transporter family1.60E-12
WP_002962354.1 3588331 3588013 - 105PF00893Multi_Drug_ResSmall Multidrug Resistance protein5.80E-21
WP_024595458.1 3589863 3588330 - 510PF00795
PF00583
CN_hydrolase
Acetyltransf_1
Carbon-nitrogen hydrolase
Acetyltransferase (GNAT) family
7.60E-32
5.20E-05
WP_193226766.1 3590800 3589951 - 282PF00753Lactamase_BMetallo-beta-lactamase superfamily6.50E-09
WP_200219654.1 3593144 3590858 - 761PF01804Penicil_amidasePenicillin amidase2.20E-123
WP_024595461.1 3593300 3595061 + 586PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
3.20E-78
3.10E-58
WP_138489822.1 3595176 3598539 + 1120PF02518
PF00072
PF00512
PF03924
PF13492
HATPase_c
Response_reg
HisKA
CHASE
GAF_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response regulator receiver domain
His Kinase A (phospho-acceptor) domain
CHASE domain
GAF domain
1.20E-28
4.40E-23
7.20E-19
9.60E-17
2.70E-06
WP_002962344.1 3598582 3599212 + 209PF04337DUF480Protein of unknown function, DUF4806.60E-60
WP_024589633.1 3599280 3600111 + 276PF02540NAD_synthaseNAD synthase1.10E-63
WP_039486916.1 3600334 3601054 + 239PF13561
PF00106
PF08659
PF01370
adh_short_C2
adh_short
KR
Epimerase
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
2.00E-26
3.80E-24
1.30E-07
5.70E-04
WP_002962341.1 3601076 3601631 + 184PF01227GTP_cyclohydroIGTP cyclohydrolase I3.40E-77
WP_002962340.1 3601635 3601992 + 118PF02152FolBDihydroneopterin aldolase3.60E-27
WP_033021866.1 3602443 3602008 - 144PF09335SNARE_assocSNARE associated Golgi protein7.80E-14
WP_002962338.1 3603037 3602671 - 121PF09685DUF4870Domain of unknown function (DUF4870)1.70E-40

Results for WP_028941266.1 [Pseudomonas umsongensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_028941259.1 1303423 1303756 + 110PF10976DUF2790Protein of unknown function (DUF2790)1.40E-24
WP_028941260.1 1304125 1304506 + 126PF19619DUF6124Family of unknown function (DUF6124)6.50E-09
WP_028941261.1 1305988 1304662 - 441PF03573OprDouter membrane porin, OprD family2.80E-152
WP_007940887.1 1306479 1306164 - 104PF15731
PF12844
PF01381
MqsA_antitoxin
HTH_19
HTH_3
Antitoxin component of bacterial toxin-antitoxin system, MqsA
Helix-turn-helix domain
Helix-turn-helix
5.70E-05
6.80E-05
8.60E-04
WP_028941262.1 1306819 1306468 - 116PF06296RelERelE toxin of RelE / RelB toxin-antitoxin system2.70E-04
WP_028941263.1 1307193 1307658 + 154PF13673
PF00583
PF13508
PF08445
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
FR47
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
FR47-like protein
1.10E-10
3.80E-09
7.30E-08
7.50E-04
WP_028941264.1 1308628 1307749 - 292PF00561
PF12146
PF12697
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
3.40E-19
3.40E-09
1.70E-08
WP_028941265.1 1309587 1308624 - 320PF13649
PF13847
PF08241
PF13489
PF08242
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
3.00E-13
8.20E-09
7.80E-08
2.30E-06
7.00E-05
WP_028941266.1 1310819 1309583 - 411PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-30
WP_256677813.1 1310991 1310862 - 42NO PFAM MATCH---
WP_018925505.1 1312900 1311436 - 487PF00361Proton_antipo_MProton-conducting membrane transporter2.40E-79
WP_028941267.1 1314440 1312907 - 510PF00361Proton_antipo_MProton-conducting membrane transporter1.40E-70
WP_018925507.1 1316334 1314480 - 617PF00361
PF00662
Proton_antipo_M
Proton_antipo_N
Proton-conducting membrane transporter
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
4.80E-89
7.00E-18
WP_007940879.1 1316639 1316330 - 102PF00420Oxidored_q2NADH-ubiquinone/plastoquinone oxidoreductase chain 4L1.80E-21
WP_019580075.1 1317145 1316641 - 167PF00499Oxidored_q3NADH-ubiquinone/plastoquinone oxidoreductase chain 66.20E-32
WP_007940875.1 1317700 1317154 - 181PF00037
PF12838
PF14697
PF13484
PF13237
Fer4
Fer4_7
Fer4_21
Fer4_16
Fer4_10
4Fe-4S binding domain
4Fe-4S dicluster domain
4Fe-4S dicluster domain
4Fe-4S double cluster binding domain
4Fe-4S dicluster domain
2.30E-14
8.00E-12
3.90E-10
5.00E-10
5.60E-09
WP_019648467.1 1318720 1317712 - 335PF00146NADHdhNADH dehydrogenase1.50E-118

Results for WP_028938801.1 [Pseudomonas umsongensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003176404.1 26921 27542 + 206PF00163
PF01479
Ribosomal_S4
S4
Ribosomal protein S4/S9 N-terminal domain
S4 domain
3.70E-31
6.80E-18
WP_003186012.1 27564 28566 + 333PF01000
PF03118
PF01193
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA polymerase Rpb3/RpoA insert domain
Bacterial RNA polymerase, alpha chain C terminal domain
RNA polymerase Rpb3/Rpb11 dimerisation domain
2.60E-26
4.50E-24
1.90E-22
WP_007924175.1 28608 28995 + 128PF01196Ribosomal_L17Ribosomal protein L177.70E-34
WP_018925656.1 29233 30688 + 484PF00199
PF06628
Catalase
Catalase-rel
Catalase
Catalase-related immune-responsive
1.10E-194
4.50E-22
WP_019581411.1 30838 31303 + 154PF00210FerritinFerritin-like domain2.10E-34
WP_007933691.1 34210 31375 - 944PF17760
PF17755
PF00005
PF02463
PF13191
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
UvrA interaction domain
UvrA DNA-binding domain
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
3.20E-39
3.90E-35
9.30E-21
1.50E-10
1.40E-07
WP_019650831.1 34401 35799 + 465PF07690
PF00083
PF12832
MFS_1
Sugar_tr
MFS_1_like
Major Facilitator Superfamily
Sugar (and other) transporter
MFS_1 like family
9.10E-50
2.60E-08
2.60E-05
WP_007933689.1 35808 36330 + 173PF00436SSBSingle-strand binding protein family6.80E-38
WP_028938801.1 38702 36503 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.70E-74
2.80E-72
4.20E-08
WP_028938802.1 39980 38822 - 385PF03738GSP_synthGlutathionylspermidine synthase preATP-grasp1.90E-138
WP_019581406.1 40721 39992 - 242PF06693DUF1190Protein of unknown function (DUF1190)3.70E-29
WP_018925663.1 41169 40740 - 142PF03994DUF350Domain of Unknown Function (DUF350)2.90E-21
WP_019581405.1 41858 41183 - 224PF10679DUF2491Protein of unknown function (DUF2491)1.80E-41
WP_028938803.1 42879 41844 - 344PF07885
PF02254
Ion_trans_2
TrkA_N
Ion channel
TrkA-N domain
2.50E-10
9.50E-04
WP_028938804.1 43514 42950 - 187PF01694RhomboidRhomboid family1.90E-20
WP_007933675.1 44386 43687 - 232PF04012PspA_IM30PspA/IM30 family4.50E-43
WP_018925667.1 44992 44410 - 193PF09938DUF2170Uncharacterized protein conserved in bacteria (DUF2170)4.40E-45

Results for WP_052448876.1 [Halomonas fontilapidosi] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_183313498.1 140475 139968 - 168PF00583
PF13673
PF13302
PF13420
PF13508
Acetyltransf_1
Acetyltransf_10
Acetyltransf_3
Acetyltransf_4
Acetyltransf_7
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
4.90E-12
2.40E-07
6.50E-07
8.60E-07
1.30E-06
WP_183313499.1 142382 140513 - 622PF00005
PF00664
PF02463
PF00004
ABC_tran
ABC_membrane
SMC_N
AAA
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
ATPase family associated with various cellular activities (AAA)
5.80E-34
2.80E-12
6.70E-06
2.70E-04
WP_183313500.1 143320 142447 - 290PF00892EamAEamA-like transporter family5.50E-29
WP_183313501.1 143859 143376 - 160PF00583
PF13508
PF13673
PF13527
PF14542
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransf_9
Acetyltransf_CG
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
GCN5-related N-acetyl-transferase
1.60E-10
3.00E-09
4.70E-09
6.80E-07
1.10E-04
WP_221199227.1 147036 144015 - 1006PF00873ACR_tranAcrB/AcrD/AcrF family1.40E-152
WP_183313503.1 148121 147056 - 354PF13437
PF13533
PF16576
HlyD_3
Biotin_lipoyl_2
HlyD_D23
HlyD family secretion protein
Biotin-lipoyl like
Barrel-sandwich domain of CusB or HlyD membrane-fusion
8.60E-11
2.30E-09
2.20E-06
WP_040187297.1 148639 148270 - 122PF01152Bac_globinBacterial-like globin1.90E-12
WP_183313504.1 148744 150790 + 681NO PFAM MATCH---
WP_052448876.1 153077 150836 - 746PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.70E-75
3.50E-72
1.50E-08
WP_052448877.1 153798 153219 - 192PF09411PagLLipid A 3-O-deacylase (PagL)5.80E-22
WP_246378394.1 154057 154402 + 114PF04134DCC1-likeDCC1-like thiol-disulfide oxidoreductase3.90E-06
WP_040187307.1 155125 154417 - 235PF00005
PF13304
PF13481
PF02463
PF13401
ABC_tran
AAA_21
AAA_25
SMC_N
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
RecF/RecN/SMC N terminal domain
AAA domain
1.30E-28
1.30E-10
3.10E-05
4.90E-05
2.20E-04
WP_221199208.1 156341 155117 - 407PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
1.50E-21
5.40E-16
WP_246378396.1 157444 156337 - 368PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
1.10E-22
1.10E-16
1.20E-11
WP_183313506.1 158785 157819 - 321PF00582UspUniversal stress protein family9.40E-31
WP_183313734.1 160416 158817 - 532PF00999
PF02254
PF03446
Na_H_Exchanger
TrkA_N
NAD_binding_2
Sodium/hydrogen exchanger family
TrkA-N domain
NAD binding domain of 6-phosphogluconate dehydrogenase
9.20E-57
1.10E-18
4.10E-04
WP_183313507.1 161642 160607 - 344PF00881
PF14512
Nitroreductase
TM1586_NiRdase
Nitroreductase family
Putative TM nitroreductase
1.90E-10
3.30E-06

Results for WP_047611935.1 [Rhizobium sp. BK591] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_097542612.1 781841 782627 + 261PF01614
PF09339
PF13412
PF12802
PF01978
IclR
HTH_IclR
HTH_24
MarR_2
TrmB
Bacterial transcriptional regulator
IclR helix-turn-helix domain
Winged helix-turn-helix DNA-binding
MarR family
Sugar-specific transcriptional regulator TrmB
2.80E-13
7.20E-11
5.50E-07
2.40E-06
7.70E-05
WP_097630172.1 782697 783012 + 104PF12840
PF01022
PF12802
HTH_20
HTH_5
MarR_2
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
7.70E-16
8.50E-09
1.30E-05
WP_097630173.1 783008 783368 + 119PF08327
PF10604
AHSA1
Polyketide_cyc2
Activator of Hsp90 ATPase homolog 1-like protein
Polyketide cyclase / dehydrase and lipid transport
1.00E-06
9.60E-04
WP_097630174.1 783410 784022 + 203PF00574CLP_proteaseClp protease5.10E-80
WP_206114704.1 784152 784971 + 272PF04909Amidohydro_2Amidohydrolase1.20E-38
WP_028759063.1 785323 785728 + 134PF01381
PF13560
PF12844
HTH_3
HTH_31
HTH_19
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.50E-11
6.60E-07
3.30E-06
WP_004668299.1 786032 785765 - 88NO PFAM MATCH---
WP_097542607.1 786844 786100 - 247PF07812TfuATfuA-like protein6.90E-39
WP_047611935.1 788103 786840 - 420PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.20E-66
WP_164735880.1 788260 788116 - 47NO PFAM MATCH---
WP_047611942.1 790319 788366 - 650PF03704
PF07719
PF13424
PF14559
PF13428
BTAD
TPR_2
TPR_12
TPR_19
TPR_14
Bacterial transcriptional activator domain
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
2.10E-14
3.10E-11
6.90E-10
1.00E-09
2.20E-09
WP_063475718.1 791997 790644 - 450PF07969
PF01979
Amidohydro_3
Amidohydro_1
Amidohydrolase family
Amidohydrolase family
2.30E-43
2.90E-07
WP_097630175.1 793001 792029 - 323PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.60E-36
8.60E-17
WP_063475720.1 793999 793003 - 331PF14226
PF03171
DIOX_N
2OG-FeII_Oxy
non-haem dioxygenase in morphine synthesis N-terminal
2OG-Fe(II) oxygenase superfamily
2.10E-21
4.80E-19
WP_063475721.1 794881 794086 - 264PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component4.40E-22
WP_063475722.1 795659 794885 - 257PF00005
PF13304
PF13191
PF13555
ABC_tran
AAA_21
AAA_16
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA ATPase domain
P-loop containing region of AAA domain
1.70E-33
7.60E-09
3.30E-04
7.90E-04
WP_184389290.1 796654 795664 - 329PF09084
PF13379
PF12974
PF00497
NMT1
NMT1_2
Phosphonate-bd
SBP_bac_3
NMT1/THI5 like
NMT1-like family
ABC transporter, phosphonate, periplasmic substrate-binding protein
Bacterial extracellular solute-binding proteins, family 3
7.20E-40
2.80E-07
1.20E-06
2.80E-04

Results for WP_018326110.1 [Rhizobium giardinii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_162709218.1 123928 123505 - 140NO PFAM MATCH---
WP_234913200.1 123929 125999 + 689NO PFAM MATCH---
WP_018326116.1 127372 126166 - 401PF00108
PF02803
PF00109
Thiolase_N
Thiolase_C
ketoacyl-synt
Thiolase, N-terminal domain
Thiolase, C-terminal domain
Beta-ketoacyl synthase, N-terminal domain
3.40E-79
2.50E-43
3.00E-04
WP_018326115.1 128075 127385 - 229PF01144CoA_transCoenzyme A transferase1.40E-31
WP_018326114.1 128779 128071 - 235PF01144CoA_transCoenzyme A transferase1.30E-64
WP_040668687.1 128919 129684 + 254PF01614
PF09339
IclR
HTH_IclR
Bacterial transcriptional regulator
IclR helix-turn-helix domain
1.70E-27
5.40E-12
WP_026203394.1 130442 129737 - 234PF14518Haem_oxygenas_2Iron-containing redox enzyme2.30E-08
WP_018326111.1 130666 130870 + 67NO PFAM MATCH---
WP_018326110.1 130934 132089 + 384PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding6.10E-60
WP_018326109.1 132088 133279 + 396PF07812TfuATfuA-like protein8.20E-33
GGD55_RS27595 133308 135909 + 867INFERRED GENE---
WP_018326107.1 136633 136084 - 182PF00440TetR_NBacterial regulatory proteins, tetR family1.30E-16
WP_026203393.1 136743 137532 + 262PF00106
PF13561
PF08659
adh_short
adh_short_C2
KR
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
KR domain
8.20E-44
1.50E-29
2.40E-10
WP_018326105.1 137588 138668 + 359PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family1.30E-84
WP_234913201.1 139273 139072 - 66NO PFAM MATCH---
WP_018326103.1 139685 139535 - 49NO PFAM MATCH---
WP_012489796.1 140987 141343 + 118INFERRED GENE---
WP_004677292.1 141339 141514 + 58INFERRED GENE---

Results for WP_018329855.1 [Rhizobium giardinii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_018329863.1 69814 69082 - 243PF00005
PF13304
PF02463
PF13401
PF13555
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA domain
P-loop containing region of AAA domain
3.20E-35
4.10E-11
1.30E-08
3.50E-05
2.10E-04
WP_018329862.1 70454 69806 - 215PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.30E-15
WP_018329861.1 71155 70450 - 234PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component3.80E-12
WP_018329860.1 72026 71222 - 267PF00497
PF12974
PF09084
PF00496
SBP_bac_3
Phosphonate-bd
NMT1
SBP_bac_5
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
NMT1/THI5 like
Bacterial extracellular solute-binding proteins, family 5 Middle
2.60E-53
4.70E-05
6.60E-05
5.40E-04
WP_018329859.1 72300 73323 + 340PF13377
PF00356
PF00532
PF13407
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
Periplasmic binding protein-like domain
Bacterial regulatory proteins, lacI family
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
4.40E-27
2.10E-17
7.30E-14
4.60E-06
WP_018329858.1 73811 74246 + 144PF01381
PF12844
PF13560
HTH_3
HTH_19
HTH_31
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
1.20E-11
4.30E-10
7.50E-10
WP_026204063.1 74251 76060 + 602PF07719
PF13414
TPR_2
TPR_11
Tetratricopeptide repeat
TPR repeat
1.90E-05
4.90E-05
WP_018329856.1 76084 76300 + 71NO PFAM MATCH---
WP_018329855.1 76299 77484 + 394PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.60E-61
WP_018329854.1 77480 78221 + 246PF07812TfuATfuA-like protein2.00E-43
WP_018329853.1 78301 78550 + 82NO PFAM MATCH---
WP_026204062.1 81127 79132 - 664PF00535
PF13641
PF13632
PF03552
PF13506
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Cellulose_synt
Glyco_transf_21
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyl transferase family group 2
Cellulose synthase
Glycosyl transferase family 21
7.00E-31
3.70E-26
1.90E-16
2.10E-12
1.20E-10
WP_040669575.1 82344 81108 - 411PF13437
PF16576
HlyD_3
HlyD_D23
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
2.60E-15
1.50E-13
WP_018329850.1 83011 84910 + 632PF00990
PF08448
PF12860
PF07694
PF13426
GGDEF
PAS_4
PAS_7
5TM-5TMR_LYT
PAS_9
Diguanylate cyclase, GGDEF domain
PAS fold
PAS fold
5TMR of 5TMR-LYT
PAS domain
2.00E-45
9.80E-23
1.30E-17
1.50E-12
1.80E-08
WP_018329849.1 85100 86450 + 449PF05598
PF13751
PF01609
DUF772
DDE_Tnp_1_6
DDE_Tnp_1
Transposase domain (DUF772)
Transposase DDE domain
Transposase DDE domain
4.30E-26
2.70E-18
2.90E-16
WP_268841586.1 86682 87870 + 395PF13458
PF01094
PF13433
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Periplasmic binding protein
Receptor family ligand binding region
Periplasmic binding protein domain
9.10E-55
1.20E-24
8.00E-19
WP_014331703.1 87957 89652 + 565INFERRED GENE---

Results for WP_001990996.1 [Bacillus thuringiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017672808.1 73 303 + 76INFERRED GENE---
WP_000332408.1 779 347 - 143NO PFAM MATCH---
WP_153577171.1 1013 2312 + 432PF07992
PF00070
PF13738
PF02852
PF01266
Pyr_redox_2
Pyr_redox
Pyr_redox_3
Pyr_redox_dim
DAO
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
FAD dependent oxidoreductase
4.30E-58
2.20E-20
5.20E-16
3.40E-15
2.40E-08
WP_001991001.1 2413 2905 + 163PF00583
PF13508
PF13673
PF17013
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransf_15
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Putative acetyl-transferase
6.30E-10
1.20E-06
8.10E-05
9.00E-04
WP_001990998.1 3049 3460 + 136PF13048DUF3908Protein of unknown function (DUF3908)2.30E-54
WP_153577151.1 5032 3490 - 513PF00881NitroreductaseNitroreductase family7.80E-13
WP_001990996.1 6998 5048 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.00E-83
WP_153577152.1 8914 6994 - 639NO PFAM MATCH---
WP_153577153.1 10298 9038 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
9.90E-82
3.40E-20
4.00E-13
1.60E-04
WP_000197168.1 13299 10431 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
6.80E-63
5.00E-55
6.30E-37
WP_000428510.1 14124 14334 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.80E-05
7.00E-05
WP_153577154.1 14336 14714 + 125NO PFAM MATCH---
WP_001178301.1 14742 14925 + 60PF13121DUF3976Domain of unknown function (DUF3976)1.10E-29
WP_153577155.1 15059 15419 + 119NO PFAM MATCH---
WP_001990989.1 15437 15707 + 89NO PFAM MATCH---

Results for WP_002195052.1 [Bacillus cereus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_002195059.1 189351 188616 - 244PF04397
PF00072
LytTR
Response_reg
LytTr DNA-binding domain
Response regulator receiver domain
1.40E-19
1.10E-16
WP_002195058.1 190663 189364 - 432PF14501
PF02518
HATPase_c_5
HATPase_c
GHKL domain
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
4.80E-17
6.50E-04
WP_242226647.1 190955 190790 - 54NO PFAM MATCH---
WP_002195056.1 191571 190932 - 212PF04647AgrBAccessory gene regulator B1.10E-30
WP_249711622.1 192998 192116 - 293NO PFAM MATCH---
WP_002195054.1 193741 193009 - 243PF00881NitroreductaseNitroreductase family4.50E-10
WP_242226649.1 194588 193721 - 288PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term1.80E-32
WP_249711624.1 195888 194634 - 417NO PFAM MATCH---
WP_002195052.1 197627 195902 - 574PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.10E-50
WP_002195051.1 199114 197623 - 496NO PFAM MATCH---
WP_001974676.1 199866 199119 - 248PF01061
PF12698
ABC2_membrane
ABC2_membrane_3
ABC-2 type transporter
ABC-2 family transporter protein
3.70E-11
5.50E-10
WP_249711626.1 200603 199880 - 240PF00005
PF13304
PF02463
PF13175
PF09818
ABC_tran
AAA_21
SMC_N
AAA_15
ABC_ATPase
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
ATPase of the ABC class
2.40E-30
2.50E-13
8.20E-07
3.70E-06
1.30E-04
WP_249711627.1 203114 200609 - 834PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus1.80E-14
WP_242298737.1 204192 203103 - 362NO PFAM MATCH---
WP_233457739.1 204265 204160 - 34PF19409Thiopep_preThiopeptide-type bacteriocin precursor9.70E-10
WP_249711629.1 205440 204702 - 245PF12698
PF01061
ABC2_membrane_3
ABC2_membrane
ABC-2 family transporter protein
ABC-2 type transporter
9.00E-14
7.10E-07
WP_002195046.1 206598 205686 - 303PF00005
PF13304
ABC_tran
AAA_21
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
1.30E-27
2.40E-05

Results for WP_048368761.1 [Pseudomonas sp. FSL R10-0399] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_153329965.1 96612 97068 + 151PF13673
PF13508
PF00583
PF08445
PF13527
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Acetyltransf_9
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
FR47-like protein
Acetyltransferase (GNAT) domain
1.00E-16
1.30E-12
5.10E-09
3.80E-05
1.40E-04
WP_048368767.1 97510 97222 - 95PF05016
PF15781
ParE_toxin
ParE-like_toxin
ParE toxin of type II toxin-antitoxin system, parDE
ParE-like toxin of type II bacterial toxin-antitoxin system
1.20E-12
4.50E-07
WP_153390601.1 97739 97499 - 79PF04221
PF01402
RelB
RHH_1
RelB antitoxin
Ribbon-helix-helix protein, copG family
3.00E-16
3.10E-04
WP_153335588.1 98292 98016 - 91PF05016ParE_toxinParE toxin of type II toxin-antitoxin system, parDE6.10E-13
WP_048368765.1 98533 98269 - 87PF01402RHH_1Ribbon-helix-helix protein, copG family5.80E-06
WP_153432904.1 98997 99348 + 116PF11275DUF3077Protein of unknown function (DUF3077)1.60E-04
WP_048368763.1 99578 99806 + 75PF02604PhdYeFM_antitoxAntitoxin Phd_YefM, type II toxin-antitoxin system6.40E-13
WP_048368762.1 99802 100177 + 124PF01850PINPIN domain3.90E-12
WP_048368761.1 100367 102578 + 736PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.60E-73
7.60E-72
4.40E-09
WP_153432905.1 102811 102658 - 50NO PFAM MATCH---
WP_048368760.1 102936 103449 + 170PF08714FaeFormaldehyde-activating enzyme (Fae)9.00E-48
WP_048368759.1 103459 104494 + 344PF00248Aldo_ket_redAldo/keto reductase family4.70E-63
WP_153432906.1 104490 105924 + 477PF00171AldedhAldehyde dehydrogenase family8.10E-172
WP_048368757.1 106067 107432 + 454PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
6.90E-57
2.20E-37
WP_153335584.1 108401 107525 - 291PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.20E-27
3.80E-22
WP_048368755.1 108617 109157 + 179PF13628
PF03713
DUF4142
DUF305
Domain of unknown function (DUF4142)
Domain of unknown function (DUF305)
5.80E-31
8.40E-04
WP_048368754.1 109503 109206 - 98PF19925DUF6388Family of unknown function (DUF6388)3.90E-33

Results for WP_000615606.1 back to top

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Couldn't process WP_000615606.1 Genbank filestream. May be corrupt.

Results for WP_063535906.1 [Bacillus thuringiensis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_063535900.1 44098 44782 + 227PF10042DUF2278Uncharacterized conserved protein (DUF2278)9.10E-75
WP_063535901.1 45630 44796 - 277PF11667DUF3267Putative zincin peptidase8.80E-04
WP_063535902.1 45825 46611 + 261PF13240
PF12773
PF13248
zinc_ribbon_2
DZR
zf-ribbon_3
zinc-ribbon domain
Double zinc ribbon
zinc-ribbon domain
1.40E-06
9.10E-06
7.70E-04
WP_063535903.1 46630 47866 + 411PF13308
PF13240
YARHG
zinc_ribbon_2
YARHG domain
zinc-ribbon domain
2.20E-21
6.90E-06
WP_000332407.1 48344 47912 - 143NO PFAM MATCH---
WP_001110220.1 48541 49876 + 445INFERRED GENE---
WP_000996782.1 50036 50447 + 136PF13048DUF3908Protein of unknown function (DUF3908)6.20E-53
WP_063535905.1 52019 50477 - 513PF00881NitroreductaseNitroreductase family2.20E-12
WP_063535906.1 53984 52034 - 649PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.30E-83
WP_063535907.1 55900 53980 - 639NO PFAM MATCH---
WP_000569896.1 57285 56025 - 419PF00198
PF00364
PF02817
PF13533
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin-requiring enzyme
e3 binding domain
Biotin-lipoyl like
3.00E-81
3.40E-20
3.70E-13
1.60E-04
WP_000197160.1 60286 57418 - 955PF00676
PF02779
PF16870
E1_dh
Transket_pyr
OxoGdeHyase_C
Dehydrogenase E1 component
Transketolase, pyrimidine binding domain
2-oxoglutarate dehydrogenase C-terminal
2.90E-63
5.20E-55
1.20E-36
WP_000428506.1 61108 61318 + 69PF01381
PF12844
PF13560
PF04545
PF08279
HTH_3
HTH_19
HTH_31
Sigma70_r4
HTH_11
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Sigma-70, region 4
HTH domain
1.60E-17
3.90E-10
1.10E-06
3.90E-05
7.00E-05
WP_001109913.1 61320 61698 + 125NO PFAM MATCH---
WP_001178294.1 61726 61909 + 60PF13121DUF3976Domain of unknown function (DUF3976)9.00E-28
WP_063535908.1 62040 62403 + 120NO PFAM MATCH---
WP_187293506.1 62513 62672 + 52NO PFAM MATCH---

Results for WP_011204839.1 back to top

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Couldn't process WP_011204839.1 Genbank filestream. May be corrupt.

Results for WP_013085672.1 [Lactobacillus crispatus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_089145624.1 33434 34685 + 416PF00188CAPCysteine-rich secretory protein family7.80E-09
WP_202401255.1 35449 34720 - 242PF00005
PF13304
PF02463
PF13175
PF13555
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
P-loop containing region of AAA domain
2.70E-36
5.20E-11
1.80E-07
2.70E-05
1.50E-04
WP_005718334.1 36935 35450 - 494PF00497
PF00528
PF10613
SBP_bac_3
BPD_transp_1
Lig_chan-Glu_bd
Bacterial extracellular solute-binding proteins, family 3
Binding-protein-dependent transport system inner membrane component
Ligated ion channel L-glutamate- and glycine-binding site
3.90E-47
2.20E-21
7.20E-06
WP_005718333.1 37886 37061 - 274NO PFAM MATCH---
WP_160811206.1 38582 37898 - 227PF00440TetR_NBacterial regulatory proteins, tetR family1.30E-07
WP_005724034.1 39733 38746 - 328PF13793
PF14572
PF00156
Pribosyltran_N
Pribosyl_synth
Pribosyltran
N-terminal domain of ribose phosphate pyrophosphokinase
Phosphoribosyl synthetase-associated domain
Phosphoribosyl transferase domain
7.50E-42
5.60E-18
2.60E-09
WP_151495703.1 40570 39823 - 248NO PFAM MATCH---
WP_013085673.1 41783 40547 - 411PF07690
PF05977
MFS_1
MFS_3
Major Facilitator Superfamily
Transmembrane secretion effector
1.40E-16
2.40E-06
WP_013085672.1 42858 41805 - 350PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding4.00E-16
WP_013085671.1 43616 42860 - 251NO PFAM MATCH---
WP_150397808.1 44337 43923 - 137NO PFAM MATCH---
WP_100733201.1 45064 44350 - 237NO PFAM MATCH---
WP_160811207.1 46062 45237 - 274PF01381HTH_3Helix-turn-helix3.10E-04
WP_054833001.1 46781 46124 - 218PF00561
PF12146
PF12697
PF00326
PF03959
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
Peptidase_S9
FSH1
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
Prolyl oligopeptidase family
Serine hydrolase (FSH1)
4.30E-15
2.40E-13
3.20E-10
4.20E-04
4.70E-04
WP_160811208.1 47602 46789 - 270PF00535
PF13641
PF10111
Glycos_transf_2
Glyco_tranf_2_3
Glyco_tranf_2_2
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
7.50E-28
2.80E-11
4.10E-08
WP_005718327.1 47762 48716 + 317PF06207DUF1002Protein of unknown function (DUF1002)3.60E-57
WP_005721709.1 49514 48743 - 256PF00075
PF01693
PF13456
RNase_H
Cauli_VI
RVT_3
RNase H
Caulimovirus viroplasmin
Reverse transcriptase-like
2.60E-20
4.70E-19
1.60E-04

Results for WP_010669756.1 back to top

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Couldn't process WP_010669756.1 Genbank filestream. May be corrupt.

Results for WP_003491688.1 [Clostridium sporogenes] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_032883737.1 6573 5922 - 216PF00072
PF00196
PF08281
PF13412
Response_reg
GerE
Sigma70_r4_2
HTH_24
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Winged helix-turn-helix DNA-binding
4.00E-24
1.80E-17
9.60E-05
8.50E-04
WP_003491673.1 7812 6720 - 363PF07730HisKA_3Histidine kinase2.60E-15
WP_003491675.1 8713 8062 - 216PF02163Peptidase_M50Peptidase family M503.80E-12
WP_003491678.1 10098 8955 - 380PF12698
PF01061
PF12679
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
1.40E-37
1.00E-25
2.30E-14
WP_003491680.1 11224 10099 - 374PF12698
PF01061
PF12679
PF12730
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_2
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
2.80E-32
8.40E-24
2.00E-17
3.10E-05
WP_003491682.1 12168 11235 - 310PF00005
PF13304
PF13555
ABC_tran
AAA_21
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
P-loop containing region of AAA domain
1.10E-34
1.80E-10
8.70E-04
WP_003491684.1 13058 12329 - 242PF19393DUF5968Family of unknown function (DUF5968)2.30E-60
WP_003491686.1 13704 13065 - 212PF02517Rce1-likeType II CAAX prenyl endopeptidase Rce1-like1.10E-10
WP_003491688.1 15037 13678 - 452PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding8.50E-49
WP_003491690.1 16135 15052 - 360NO PFAM MATCH---
WP_225722656.1 17082 16137 - 314PF00881NitroreductaseNitroreductase family9.00E-21
WP_003359769.1 17438 17264 - 57NO PFAM MATCH---
WP_003491693.1 18774 17757 - 338NO PFAM MATCH---
WP_003491694.1 19788 18783 - 334PF09992NAGPAPhosphodiester glycosidase3.30E-48

Results for WP_064826186.1 [Rhizobium phaseoli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_064826299.1 192718 193660 + 313PF00528
PF12676
BPD_transp_1
DUF3796
Binding-protein-dependent transport system inner membrane component
Protein of unknown function (DUF3796)
1.40E-14
2.00E-04
WP_016736597.1 193656 194472 + 271PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane component1.10E-11
WP_010023496.1 194533 194881 + 115PF12840HTH_20Helix-turn-helix domain3.10E-12
WP_064826190.1 194873 195377 + 167PF08327
PF10604
AHSA1
Polyketide_cyc2
Activator of Hsp90 ATPase homolog 1-like protein
Polyketide cyclase / dehydrase and lipid transport
2.70E-24
3.50E-05
WP_064826189.1 195473 197246 + 590PF07719
PF00515
PF14559
PF13414
PF00211
TPR_2
TPR_1
TPR_19
TPR_11
Guanylate_cyc
Tetratricopeptide repeat
Tetratricopeptide repeat
Tetratricopeptide repeat
TPR repeat
Adenylate and Guanylate cyclase catalytic domain
1.70E-22
1.10E-17
9.00E-14
1.00E-13
3.50E-13
WP_010020982.1 197306 197816 + 169PF13238
PF13521
PF13671
PF07475
AAA_18
AAA_28
AAA_33
Hpr_kinase_C
AAA domain
AAA domain
AAA domain
HPr Serine kinase C-terminal domain
1.30E-05
1.70E-04
5.40E-04
7.40E-04
WP_064826188.1 197892 200502 + 869PF00501AMP-bindingAMP-binding enzyme1.50E-51
WP_064826187.1 200610 203610 + 999PF00211
PF13191
Guanylate_cyc
AAA_16
Adenylate and Guanylate cyclase catalytic domain
AAA ATPase domain
1.40E-20
9.20E-20
WP_064826186.1 203615 204779 + 387PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.40E-45
WP_064826185.1 204768 205536 + 255PF07812TfuATfuA-like protein5.10E-38
WP_064826184.1 205578 206799 + 406NO PFAM MATCH---
WP_064826183.1 206818 207295 + 158NO PFAM MATCH---
WP_064826182.1 207324 207678 + 117NO PFAM MATCH---
WP_064826181.1 208603 207706 - 298PF00990GGDEFDiguanylate cyclase, GGDEF domain6.90E-39
WP_141489223.1 209486 208841 - 214NO PFAM MATCH---
WP_081277771.1 209920 209737 - 60PF08681DUF1778Protein of unknown function (DUF1778)1.50E-06
WP_064826178.1 212151 210033 - 705PF17804
PF03572
PF11818
PF00595
PF17820
TSP_NTD
Peptidase_S41
DUF3340
PDZ
PDZ_6
Tail specific protease N-terminal domain
Peptidase family S41
C-terminal domain of tail specific protease (DUF3340)
PDZ domain
PDZ domain
2.00E-59
2.30E-48
4.10E-35
2.50E-12
2.20E-05

Results for WP_061083533.1 [Nocardiopsis alborubida NBRC 13392] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_231972663.1 9 5601 + 1863PF00668
PF00501
PF00550
PF13193
Condensation
AMP-binding
PP-binding
AMP-binding_C
Condensation domain
AMP-binding enzyme
Phosphopantetheine attachment site
AMP-binding enzyme C-terminal domain
8.50E-133
7.90E-131
4.10E-28
8.80E-27
WP_061083533.1 7020 5643 - 458PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.10E-33
WP_061083534.1 7304 8237 + 310PF13649
PF08242
PF08241
PF13847
PF05175
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_31
MTS
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase small domain
1.30E-10
2.30E-08
6.70E-07
1.10E-06
3.40E-05
WP_061083535.1 9532 8311 - 406PF08240
PF00107
PF01262
PF00291
ADH_N
ADH_zinc_N
AlaDh_PNT_C
PALP
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
Alanine dehydrogenase/PNT, C-terminal domain
Pyridoxal-phosphate dependent enzyme
3.00E-26
9.80E-10
4.20E-07
8.20E-04
WP_061083536.1 10784 10313 - 156PF12802
PF01047
MarR_2
MarR
MarR family
MarR family
4.40E-08
7.30E-06
WP_061083537.1 10906 11785 + 292PF02900LigBCatalytic LigB subunit of aromatic ring-opening dioxygenase1.90E-35
WP_061083538.1 11864 12800 + 311PF13602
PF08240
PF00107
ADH_zinc_N_2
ADH_N
ADH_zinc_N
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
Zinc-binding dehydrogenase
6.00E-11
2.00E-10
9.20E-09
WP_061083539.1 14310 13728 - 193NO PFAM MATCH---

Results for WP_041683745.1 [Rhizobium phaseoli] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_004676330.1 605769 604617 - 383PF00534
PF13692
PF13439
PF13524
PF13579
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_1_2
Glyco_trans_4_4
Glycosyl transferases group 1
Glycosyl transferases group 1
Glycosyltransferase Family 4
Glycosyl transferases group 1
Glycosyl transferase 4-like domain
8.10E-29
1.20E-24
1.80E-12
2.70E-08
5.40E-06
WP_064825532.1 606874 605800 - 357PF00331Glyco_hydro_10Glycosyl hydrolase family 101.30E-68
WP_064825531.1 607324 607141 - 60NO PFAM MATCH---
WP_064825530.1 608217 607368 - 282PF19495DUF6030Family of unknown function (DUF6030)1.20E-62
WP_012484885.1 608633 609266 + 210PF13489
PF08241
PF13649
PF08242
PF13847
Methyltransf_23
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
Methyltransferase domain
4.70E-22
3.70E-16
9.30E-14
6.30E-12
5.30E-10
WP_010025368.1 609475 609901 + 141PF01381
PF12844
PF13560
PF13443
HTH_3
HTH_19
HTH_31
HTH_26
Helix-turn-helix
Helix-turn-helix domain
Helix-turn-helix domain
Cro/C1-type HTH DNA-binding domain
2.20E-12
1.50E-07
2.90E-07
3.60E-04
WP_010025369.1 609910 611755 + 614PF14559
PF13414
PF12895
TPR_19
TPR_11
ANAPC3
Tetratricopeptide repeat
TPR repeat
Anaphase-promoting complex, cyclosome, subunit 3
3.90E-04
4.70E-04
9.20E-04
WP_009999342.1 611775 611988 + 70NO PFAM MATCH---
WP_041683745.1 612030 613206 + 391PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding7.70E-65
WP_064825529.1 613202 613910 + 235PF07812TfuATfuA-like protein9.20E-42
WP_037116551.1 614012 614261 + 82NO PFAM MATCH---
WP_041683744.1 614427 614916 + 162NO PFAM MATCH---
WP_004676311.1 615657 615450 - 68NO PFAM MATCH---
WP_012484879.1 617955 616845 - 369PF00535
PF10111
PF13641
PF13704
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 2
8.90E-35
2.10E-23
1.70E-21
4.00E-06
WP_012484878.1 619712 617960 - 583PF00005
PF00664
PF02463
PF13555
PF13191
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_16
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
P-loop containing region of AAA domain
AAA ATPase domain
8.40E-32
7.40E-14
1.80E-06
8.80E-05
2.60E-04
WP_184328497.1 620775 619704 - 356PF00535
PF10111
PF13641
PF13704
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Glycosyl transferase family 2
Glycosyltransferase like family 2
Glycosyltransferase like family 2
Glycosyl transferase family 2
1.80E-33
3.70E-18
1.40E-16
8.00E-05
WP_064825527.1 623780 620780 - 999PF00535
PF05401
PF01522
PF13641
PF13649
Glycos_transf_2
NodS
Polysacc_deac_1
Glyco_tranf_2_3
Methyltransf_25
Glycosyl transferase family 2
Nodulation protein S (NodS)
Polysaccharide deacetylase
Glycosyltransferase like family 2
Methyltransferase domain
3.80E-27
9.60E-23
8.60E-20
8.90E-15
4.90E-14

Results for WP_034127584.1 [Pseudomonas sp. WS 5503] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_034127576.1 243541 242146 - 464PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
1.00E-28
3.70E-25
WP_034127577.1 244691 243638 - 350PF01408
PF02894
PF01113
GFO_IDH_MocA
GFO_IDH_MocA_C
DapB_N
Oxidoreductase family, NAD-binding Rossmann fold
Oxidoreductase family, C-terminal alpha/beta domain
Dihydrodipicolinate reductase, N-terminus
4.40E-22
4.10E-19
9.10E-05
WP_034127578.1 244800 245742 + 313PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.10E-30
4.60E-17
WP_034127579.1 246717 245823 - 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
9.30E-40
2.80E-16
WP_034127580.1 246811 247996 + 394PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
1.20E-33
1.50E-10
4.80E-08
WP_034127581.1 248054 248537 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase6.00E-46
WP_034127583.1 249028 250405 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
5.00E-64
5.00E-15
WP_019817159.1 250401 251568 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme1.70E-149
WP_034127584.1 253890 251691 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
9.20E-75
9.00E-71
3.70E-08
WP_034127585.1 254054 254633 + 192PF00857IsochorismataseIsochorismatase family1.50E-36
WP_034127586.1 255192 254742 - 149PF00293NUDIXNUDIX domain2.00E-15
WP_020302289.1 255184 255982 + 266INFERRED GENE---
WP_034127588.1 256458 255978 - 159PF13671
PF13238
PF01712
AAA_33
AAA_18
dNK
AAA domain
AAA domain
Deoxynucleoside kinase
9.80E-28
5.40E-06
1.00E-04
WP_034127589.1 256681 257005 + 107NO PFAM MATCH---
WP_034127590.1 257093 257519 + 141PF09990DUF2231Predicted membrane protein (DUF2231)9.50E-09
WP_014718638.1 257515 258808 + 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.30E-11
2.50E-05
WP_034127591.1 259747 258838 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.20E-24
5.70E-20

Results for WP_057004615.1 [Pseudomonas veronii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017846411.1 44744 44339 - 134PF01042Ribonuc_L-PSPEndoribonuclease L-PSP9.80E-26
WP_057004609.1 44887 45814 + 308PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
4.70E-36
1.40E-18
WP_017846413.1 46026 46509 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.80E-45
WP_057004610.1 46872 47724 + 283PF00701DHDPSDihydrodipicolinate synthetase family4.50E-52
WP_057004611.1 48433 47698 - 244PF07729
PF00392
PF01325
PF13412
FCD
GntR
Fe_dep_repress
HTH_24
FCD domain
Bacterial regulatory proteins, gntR family
Iron dependent repressor, N-terminal DNA binding domain
Winged helix-turn-helix DNA-binding
1.40E-21
2.90E-17
3.20E-06
4.20E-04
WP_082643838.1 50232 48435 - 598PF01425AmidaseAmidase1.80E-89
WP_057004613.1 50488 51865 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
8.50E-63
1.20E-15
WP_057004614.1 51861 53028 + 388PF01053
PF00266
PF00155
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
Cys/Met metabolism PLP-dependent enzyme
Aminotransferase class-V
Aminotransferase class I and II
5.40E-149
4.10E-04
4.30E-04
WP_057004615.1 55267 53068 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.30E-74
4.60E-73
2.10E-08
WP_057004616.1 55480 57046 + 521PF00015
PF08447
PF00989
PF13426
MCPsignal
PAS_3
PAS
PAS_9
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS fold
PAS domain
6.50E-47
5.00E-12
3.70E-10
9.20E-10
WP_057004617.1 57483 57120 - 120PF13806Rieske_2Rieske-like [2Fe-2S] domain5.60E-35
WP_017846423.1 60044 57482 - 853PF07992
PF01077
PF00070
PF04324
PF03460
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Pyridine nucleotide-disulphide oxidoreductase
Nitrite and sulphite reductase 4Fe-4S domain
Pyridine nucleotide-disulphide oxidoreductase
BFD-like [2Fe-2S] binding domain
Nitrite/Sulfite reductase ferredoxin-like half domain
3.70E-45
4.70E-19
3.50E-13
1.80E-11
3.30E-11
WP_169850574.1 60561 64617 + 1351PF00384
PF01568
PF00258
PF00667
PF04879
Molybdopterin
Molydop_binding
Flavodoxin_1
FAD_binding_1
Molybdop_Fe4S4
Molybdopterin oxidoreductase
Molydopterin dinucleotide binding domain
Flavodoxin
FAD binding domain
Molybdopterin oxidoreductase Fe4S4 domain
1.20E-69
6.30E-34
7.40E-29
1.50E-28
6.10E-18
WP_046383619.1 65178 64698 - 159PF13671
PF13238
PF01712
PF06414
AAA_33
AAA_18
dNK
Zeta_toxin
AAA domain
AAA domain
Deoxynucleoside kinase
Zeta toxin
1.80E-25
2.90E-06
7.00E-04
9.60E-04
WP_057004619.1 66181 65272 - 302PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
6.90E-26
3.30E-19
WP_057004620.1 66358 67195 + 278PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
1.10E-21
1.60E-21
3.10E-09
WP_057004621.1 67265 68186 + 306PF00583
PF13508
PF13673
PF01047
PF12802
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
MarR
MarR_2
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
MarR family
MarR family
5.60E-17
6.20E-14
2.30E-13
5.10E-11
1.10E-09

Results for WP_029297804.1 [Pseudomonas proteolytica] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003103101.1 30616 31072 + 152INFERRED GENE---
WP_029297815.1 32748 31875 - 290PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases2.30E-27
WP_092238218.1 32967 34779 + 603PF04348
PF13458
LppC
Peripla_BP_6
LppC putative lipoprotein
Periplasmic binding protein
1.10E-171
4.60E-08
WP_029297812.1 34778 35150 + 123PF02021UPF0102Uncharacterised protein family UPF01021.30E-26
WP_003171862.1 35254 35848 + 197PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
1.20E-33
9.40E-07
WP_029297811.1 35844 36426 + 193PF04972BONBON domain4.60E-28
WP_236310495.1 37256 36494 - 253PF00691
PF13488
OmpA
Gly-zipper_Omp
OmpA family
Glycine zipper
6.50E-22
8.80E-04
WP_029297806.1 38067 37422 - 214PF00753
PF14597
Lactamase_B
Lactamase_B_5
Metallo-beta-lactamase superfamily
Metallo-beta-lactamase superfamily
7.60E-30
8.80E-04
WP_029297804.1 40269 38079 - 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.00E-74
4.60E-72
3.10E-08
WP_092238222.1 43077 40341 - 911PF00196
PF17874
PF13191
GerE
TPR_MalT
AAA_16
Bacterial regulatory proteins, luxR family
MalT-like TPR region
AAA ATPase domain
6.60E-18
4.80E-12
9.20E-07
WP_029297800.1 44699 43334 - 454PF07044
PF17131
DUF1329
LolA_like
Protein of unknown function (DUF1329)
Outer membrane lipoprotein-sorting protein
5.00E-157
3.20E-07
WP_092238225.1 46602 44727 - 624PF06980DUF1302Protein of unknown function (DUF1302)1.60E-171
WP_092238228.1 48620 46937 - 560PF00501
PF13193
AMP-binding
AMP-binding_C
AMP-binding enzyme
AMP-binding enzyme C-terminal domain
3.10E-84
6.20E-17
WP_029297794.1 49397 48767 - 209PF01810LysELysE type translocator1.90E-34
WP_092238231.1 49481 50447 + 321PF02826
PF00389
2-Hacid_dh_C
2-Hacid_dh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
6.60E-50
3.30E-24
WP_029297791.1 50478 51477 + 332PF05175
PF08468
PF13649
PF08242
PF00891
MTS
MTS_N
Methyltransf_25
Methyltransf_12
Methyltransf_2
Methyltransferase small domain
Methyltransferase small domain N-terminal
Methyltransferase domain
Methyltransferase domain
O-methyltransferase domain
1.80E-55
2.90E-42
3.60E-08
4.50E-06
9.10E-06
WP_029297789.1 51737 52322 + 194PF01169UPF0016Uncharacterized protein family UPF00163.70E-41

Results for WP_057711791.1 [Pseudomonas lactis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_044270781.1 159980 161084 + 367PF00724Oxidored_FMNNADH:flavin oxidoreductase / NADH oxidase family2.40E-86
WP_057711794.1 161228 161612 + 127PF12893Lumazine_bd_2Putative lumazine-binding2.30E-21
WP_057711793.1 162773 161879 - 297PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.50E-39
3.90E-17
WP_034135712.1 162867 164052 + 394PF07690
PF06779
PF00083
MFS_1
MFS_4
Sugar_tr
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
Sugar (and other) transporter
4.60E-35
1.10E-10
5.40E-09
WP_003191630.1 164116 164836 + 239PF00106
PF13561
adh_short
adh_short_C2
short chain dehydrogenase
Enoyl-(Acyl carrier protein) reductase
1.10E-22
1.00E-09
WP_003191632.1 164901 165384 + 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.00E-46
WP_034134969.1 166055 167432 + 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
4.90E-64
1.00E-14
WP_057711792.1 167428 168595 + 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme2.30E-149
WP_057711791.1 170916 168717 - 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.00E-75
1.70E-71
3.70E-08
WP_003191639.1 171061 171622 + 186PF00857IsochorismataseIsochorismatase family2.40E-36
WP_003191640.1 172134 171684 - 149PF00293NUDIXNUDIX domain9.70E-16
WP_020302289.1 172126 172924 + 266INFERRED GENE---
WP_057711789.1 173400 172920 - 159PF13671
PF13238
PF01712
AAA_33
AAA_18
dNK
AAA domain
AAA domain
Deoxynucleoside kinase
8.60E-27
7.80E-06
3.50E-05
WP_057711788.1 173588 174014 + 141PF09990DUF2231Predicted membrane protein (DUF2231)3.80E-09
WP_003191644.1 174010 175303 + 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.30E-11
1.80E-05
WP_003191645.1 177022 175567 - 484PF02321OEPOuter membrane efflux protein1.60E-33
WP_034134962.1 180195 177018 - 1058PF00873
PF03176
PF02355
ACR_tran
MMPL
SecD_SecF
AcrB/AcrD/AcrF family
MMPL family
Protein export membrane protein
0.00E+00
1.40E-15
3.60E-05

Results for WP_027608452.1 [Pseudomonas marginalis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_169899410.1 310437 311844 + 468NO PFAM MATCH---
WP_169899412.1 311974 313102 + 375PF03435Sacchrp_dh_NADPSaccharopine dehydrogenase NADP binding domain1.30E-06
WP_169899414.1 313105 313603 + 165PF10027DUF2269Predicted integral membrane protein (DUF2269)1.50E-48
WP_092356996.1 315065 313727 - 445PF00083
PF07690
Sugar_tr
MFS_1
Sugar (and other) transporter
Major Facilitator Superfamily
1.90E-33
4.80E-33
WP_256221430.1 316075 315214 - 286PF00892
PF10639
EamA
TMEM234
EamA-like transporter family
Putative transmembrane family 234
5.00E-18
1.60E-04
WP_027608455.1 316905 316284 - 206PF01810LysELysE type translocator4.70E-32
WP_027608454.1 318778 317212 - 521PF00015
PF08447
PF13426
PF00989
PF08448
MCPsignal
PAS_3
PAS_9
PAS
PAS_4
Methyl-accepting chemotaxis protein (MCP) signalling domain
PAS fold
PAS domain
PAS fold
PAS fold
6.10E-49
8.80E-13
4.00E-10
2.00E-09
1.50E-04
WP_043293903.1 320039 318884 - 384PF00990GGDEFDiguanylate cyclase, GGDEF domain1.70E-40
WP_027608452.1 320248 322447 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
1.50E-74
1.20E-71
5.60E-08
WP_146476165.1 323678 322511 - 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme2.50E-150
WP_169899415.1 325051 323674 - 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
8.00E-64
6.60E-16
WP_169899417.1 325297 327094 + 598PF01425AmidaseAmidase1.20E-88
WP_043293882.1 327096 327789 + 230PF07729
PF00392
FCD
GntR
FCD domain
Bacterial regulatory proteins, gntR family
5.90E-20
4.60E-17
WP_169899420.1 329190 328326 - 287PF00701DHDPSDihydrodipicolinate synthetase family3.90E-52
WP_146476170.1 329992 329512 - 159PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase1.00E-46
WP_146476172.1 330418 330025 - 130PF07366
PF12680
SnoaL
SnoaL_2
SnoaL-like polyketide cyclase
SnoaL-like domain
5.80E-39
1.00E-14
WP_098479372.1 331048 330427 - 206PF01810LysELysE type translocator2.10E-25

Results for WP_076963514.1 [Pseudomonas gessardii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_076963514.1 78 2268 + 729PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.70E-74
6.70E-72
1.60E-07
WP_169900019.1 2280 2925 + 214PF00753
PF14597
Lactamase_B
Lactamase_B_5
Metallo-beta-lactamase superfamily
Metallo-beta-lactamase superfamily
1.10E-27
6.10E-04
WP_076963512.1 3091 3853 + 253PF00691
PF13488
OmpA
Gly-zipper_Omp
OmpA family
Glycine zipper
6.40E-22
1.80E-05
WP_099167623.1 4504 3922 - 193PF04972BONBON domain4.60E-28
WP_003171862.1 5094 4500 - 197PF13580
PF01380
SIS_2
SIS
SIS domain
SIS domain
1.20E-33
9.40E-07
WP_076963510.1 5570 5198 - 123PF02021UPF0102Uncharacterised protein family UPF01021.60E-26
WP_076963509.1 7381 5569 - 603PF04348
PF13458
LppC
Peripla_BP_6
LppC putative lipoprotein
Periplasmic binding protein
2.60E-171
4.40E-08
WP_076963508.1 7600 8473 + 290PF00590TP_methylaseTetrapyrrole (Corrin/Porphyrin) Methylases4.00E-28

Results for WP_012271944.1 [Pseudomonas sp. MB04B] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_012271952.1 300807 301572 + 254PF13646HEAT_2HEAT repeats2.60E-04
WP_012271951.1 302158 301576 - 193NO PFAM MATCH---
WP_012271950.1 302383 304516 + 710PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
4.90E-55
1.20E-22
WP_012271949.1 305876 304583 - 430PF07995
PF01436
GSDH
NHL
Glucose / Sorbosone dehydrogenase
NHL repeat
2.50E-13
9.10E-05
WP_012271948.1 306301 305872 - 142PF09990DUF2231Predicted membrane protein (DUF2231)2.60E-11
WP_012271947.1 306465 306756 + 96PF13827DUF4189Domain of unknown function (DUF4189)3.40E-04
WP_012271946.1 307058 310049 + 996PF20249VasX_NVasX toxin N-terminal region2.00E-23
WP_012271945.1 310051 310942 + 296PF20455DUF6708Family of unknown function (DUF6708)5.90E-06
WP_012271944.1 313152 310965 - 728PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
8.80E-74
2.00E-72
3.40E-08
WP_012271943.1 313410 313866 + 151PF01799
PF00111
PF13085
Fer2_2
Fer2
Fer2_3
[2Fe-2S] binding domain
2Fe-2S iron-sulfur cluster binding domain
2Fe-2S iron-sulfur cluster binding domain
1.20E-22
2.60E-07
4.70E-05
WP_012271942.1 313865 316115 + 749PF02738
PF20256
MoCoBD_1
MoCoBD_2
Molybdopterin cofactor-binding domain
Molybdopterin cofactor-binding domain
5.70E-34
1.10E-30
WP_012271941.1 316133 317495 + 453PF00034
PF13442
Cytochrom_C
Cytochrome_CBB3
Cytochrome c
Cytochrome C oxidase, cbb3-type, subunit III
1.40E-24
6.10E-21
WP_012271940.1 317534 318554 + 339PF13478
PF02625
XdhC_C
XdhC_CoxI
XdhC Rossmann domain
XdhC and CoxI family
2.50E-35
6.20E-24
WP_012271939.1 319360 318571 - 262PF00497
PF12974
SBP_bac_3
Phosphonate-bd
Bacterial extracellular solute-binding proteins, family 3
ABC transporter, phosphonate, periplasmic substrate-binding protein
1.10E-26
3.90E-04
WP_012271938.1 320209 319567 - 213PF01810LysELysE type translocator4.00E-31
WP_012271937.1 320459 320258 - 66PF06945DUF1289Protein of unknown function (DUF1289)1.50E-15
WP_012271936.1 320785 320467 - 105NO PFAM MATCH---

Results for WP_043008414.1 [Vibrio coralliilyticus] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038510893.1 59267 58271 - 331PF03480DctPBacterial extracellular solute-binding protein, family 73.20E-86
WP_038510895.1 60479 59519 - 319PF13377
PF00532
PF13407
PF00356
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Periplasmic binding protein-like domain
Periplasmic binding proteins and sugar binding domain of LacI family
Periplasmic binding protein domain
Bacterial regulatory proteins, lacI family
2.10E-29
4.60E-20
2.80E-12
2.80E-09
WP_043008425.1 61378 60628 - 249PF03328HpcH_HpaIHpcH/HpaI aldolase/citrate lyase family5.50E-31
WP_043008423.1 61667 62960 + 430PF00815Histidinol_dhHistidinol dehydrogenase1.90E-143
WP_043008422.1 62961 63696 + 244PF13561
PF00106
PF08659
PF01370
PF16363
adh_short_C2
adh_short
KR
Epimerase
GDP_Man_Dehyd
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
NAD dependent epimerase/dehydratase family
GDP-mannose 4,6 dehydratase
2.70E-51
1.60E-46
1.40E-10
7.80E-09
1.00E-04
WP_043008420.1 63782 64778 + 331PF07883
PF00190
PF11699
Cupin_2
Cupin_1
CENP-C_C
Cupin domain
Cupin
Mif2/CENP-C like
2.00E-10
2.60E-08
5.00E-05
WP_043008419.1 64788 65511 + 240PF00561
PF12146
PF12697
PF00975
PF12695
Abhydrolase_1
Hydrolase_4
Abhydrolase_6
Thioesterase
Abhydrolase_5
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Alpha/beta hydrolase family
Thioesterase domain
Alpha/beta hydrolase family
2.40E-14
4.10E-13
5.10E-13
1.60E-08
1.20E-05
WP_043008417.1 66375 65643 - 243PF00881NitroreductaseNitroreductase family1.70E-18
WP_043008414.1 67580 66389 - 396PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding2.70E-31
WP_043008412.1 68407 67585 - 273NO PFAM MATCH---

Results for WP_008332306.1 [Herbaspirillum sp. C7C8] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_017454451.1 0 204 + 68INFERRED GENE---
WP_008332306.1 2608 400 - 735PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.90E-74
1.30E-72
1.20E-08
WP_008332418.1 3498 3009 - 162PF04386SspBStringent starvation protein B5.00E-39
WP_017453790.1 4230 3618 - 203PF13417
PF02798
PF13409
PF00043
PF13410
GST_N_3
GST_N
GST_N_2
GST_C
GST_C_2
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, N-terminal domain
Glutathione S-transferase, C-terminal domain
Glutathione S-transferase, C-terminal domain
2.10E-17
1.00E-16
2.40E-15
2.00E-08
1.40E-06
WP_008332420.1 5092 4327 - 254PF02167
PF13442
Cytochrom_C1
Cytochrome_CBB3
Cytochrome C1 family
Cytochrome C oxidase, cbb3-type, subunit III
2.50E-24
8.30E-04
WP_241821177.1 6522 5115 - 468PF00033
PF13631
PF00032
Cytochrome_B
Cytochrom_B_N_2
Cytochrom_B_C
Cytochrome b/b6/petB
Cytochrome b(N-terminal)/b6/petB
Cytochrome b(C-terminal)/b6/petD
9.70E-65
5.70E-43
6.60E-37
WP_034351097.1 7133 6524 - 202PF00355RieskeRieske [2Fe-2S] domain3.60E-12
WP_175344824.1 7431 7863 + 143PF01741MscLLarge-conductance mechanosensitive channel, MscL1.90E-41
WP_034351099.1 8705 7940 - 254PF01784NIF3NIF3 (NGG1p interacting factor 3)4.50E-52
WP_034351100.1 8749 9931 + 393PF13365
PF00089
PF13180
PF17820
PF02163
Trypsin_2
Trypsin
PDZ_2
PDZ_6
Peptidase_M50
Trypsin-like peptidase domain
Trypsin
PDZ domain
PDZ domain
Peptidase family M50
7.30E-33
5.50E-17
2.90E-16
6.30E-12
9.30E-11

Results for WP_047468149.1 [Streptomyces odorifer] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_175458267.1 147814 145804 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.60E-77
WP_030699442.1 148697 147941 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.90E-29
1.80E-21
3.30E-05
WP_030699443.1 149689 148747 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
4.30E-28
1.80E-14
2.00E-05
1.40E-04
WP_217685787.1 150808 149740 - 355PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
4.00E-04
5.70E-04
WP_030699445.1 151923 150855 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.70E-95
WP_217685785.1 154655 151919 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.70E-46
WP_217685786.1 156256 154681 - 524PF00881NitroreductaseNitroreductase family3.80E-20
WP_030699448.1 158293 156340 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-80
WP_047468149.1 160505 158282 - 740NO PFAM MATCH---
WP_151168336.1 162398 160511 - 628PF03704
PF13191
PF00931
PF00486
PF00004
BTAD
AAA_16
NB-ARC
Trans_reg_C
AAA
Bacterial transcriptional activator domain
AAA ATPase domain
NB-ARC domain
Transcriptional regulatory protein, C terminal
ATPase family associated with various cellular activities (AAA)
1.00E-38
7.50E-11
1.90E-08
3.10E-08
5.20E-04
WP_175458266.1 162640 162406 - 77NO PFAM MATCH---
WP_217686255.1 163131 164691 + 519PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
1.90E-50
2.60E-11
6.10E-11
WP_217686219.1 165316 164710 - 201PF13977
PF00440
PF16859
TetR_C_6
TetR_N
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
4.50E-21
6.00E-10
7.90E-04
WP_217686256.1 165415 165946 + 176PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
5.20E-18
2.00E-06
WP_175510483.1 166773 166005 - 255PF05630NPP1Necrosis inducing protein (NPP1)2.40E-63
WP_217686224.1 166950 167574 + 207PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.60E-36
WP_175510482.1 168539 167570 - 322NO PFAM MATCH---

Results for WP_030699448.1 [Streptomyces sp. BI87] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026048345.1 2487666 2487843 + 58NO PFAM MATCH---
WP_264491182.1 2489939 2487929 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-77
WP_030699442.1 2490822 2490066 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.90E-29
1.80E-21
3.30E-05
WP_264491183.1 2491813 2490871 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
7.00E-28
1.90E-14
1.90E-05
1.40E-04
WP_030699444.1 2492983 2491864 - 372PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
4.70E-04
8.20E-04
WP_030699445.1 2494047 2492979 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.70E-95
WP_264491184.1 2496779 2494043 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.80E-46
WP_030699447.1 2498413 2496805 - 535PF00881NitroreductaseNitroreductase family4.10E-20
WP_030699448.1 2500417 2498464 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-80
WP_264491185.1 2502629 2500406 - 740NO PFAM MATCH---
WP_264491186.1 2504522 2502635 - 628PF03704
PF13191
PF00931
PF00486
PF00004
BTAD
AAA_16
NB-ARC
Trans_reg_C
AAA
Bacterial transcriptional activator domain
AAA ATPase domain
NB-ARC domain
Transcriptional regulatory protein, C terminal
ATPase family associated with various cellular activities (AAA)
6.80E-39
8.20E-11
1.90E-08
3.00E-08
5.20E-04
WP_030699451.1 2504764 2504530 - 77NO PFAM MATCH---
WP_030699452.1 2505222 2506815 + 530PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
2.00E-50
2.70E-11
6.40E-11
WP_030699453.1 2507386 2506834 - 183PF13977
PF00440
PF16859
TetR_C_6
TetR_N
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
2.80E-21
9.80E-10
6.40E-04
WP_030699454.1 2507506 2508070 + 187PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
9.30E-19
2.30E-06
WP_226964305.1 2508897 2508129 - 255PF05630NPP1Necrosis inducing protein (NPP1)2.40E-63
WP_030699456.1 2509066 2509699 + 210PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)6.50E-37

Results for WP_030698891.1 [Streptomyces sp. WAC00276] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_030698896.1 3946724 3947096 + 123NO PFAM MATCH---
WP_030698895.1 3947092 3948034 + 313PF00005
PF13304
PF13401
ABC_tran
AAA_21
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
1.70E-28
2.50E-14
1.10E-04
WP_030698894.1 3948030 3948828 + 265PF12698
PF12730
ABC2_membrane_3
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 family transporter protein
2.90E-05
1.00E-04
WP_008405005.1 3949167 3948891 - 91PF03621MbtHMbtH-like protein7.00E-30
WP_030698893.1 3950133 3949323 - 269PF12697
PF00561
PF12146
PF08386
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Abhydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
TAP-like protein
1.00E-19
7.80E-17
1.30E-09
7.00E-05
WP_047471013.1 3951594 3950169 - 474PF00171AldedhAldehyde dehydrogenase family1.10E-26
WP_023418725.1 3952488 3953436 + 315PF12840
PF01022
PF12802
PF13545
PF13412
HTH_20
HTH_5
MarR_2
HTH_Crp_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Crp-like helix-turn-helix domain
Winged helix-turn-helix DNA-binding
3.00E-08
1.70E-06
3.20E-05
2.80E-04
3.00E-04
WP_175457485.1 3953671 3953848 + 58NO PFAM MATCH---
WP_030698891.1 3953844 3956136 + 763PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-98
WP_047471011.1 3956281 3957544 + 420PF07730HisKA_3Histidine kinase3.00E-15
WP_023418729.1 3957586 3958198 + 203PF00072
PF00196
PF08281
PF13384
PF04545
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
Sigma-70, region 4
1.80E-19
8.70E-18
6.60E-06
1.40E-05
1.50E-04
WP_030698889.1 3958891 3958207 - 227NO PFAM MATCH---
WP_247860761.1 3960602 3959063 - 512PF03703bPH_2Bacterial PH domain3.00E-43
WP_175457487.1 3961132 3960598 - 177PF03703bPH_2Bacterial PH domain1.20E-14
WP_030698886.1 3961163 3962306 + 380PF00346Complex1_49kDaRespiratory-chain NADH dehydrogenase, 49 Kd subunit2.40E-67
WP_018895486.1 3962443 3963489 + 348INFERRED GENE---
WP_030698884.1 3963678 3964884 + 401PF07730
PF02518
HisKA_3
HATPase_c
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
4.90E-22
3.70E-05

Results for WP_071330084.1 [Streptomyces sp. CAI-21] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_129805184.1 12803 13388 + 194PF12840
PF13412
PF01022
PF12802
HTH_20
HTH_24
HTH_5
MarR_2
Helix-turn-helix domain
Winged helix-turn-helix DNA-binding
Bacterial regulatory protein, arsR family
MarR family
3.50E-09
8.80E-07
1.90E-05
1.50E-04
WP_003946610.1 13524 14634 + 369PF01594AI-2E_transportAI-2E family transporter7.10E-52
WP_010639430.1 15276 14715 - 186PF12464
PF00132
PF14602
Mac
Hexapep
Hexapep_2
Maltose acetyltransferase
Bacterial transferase hexapeptide (six repeats)
Hexapeptide repeat of succinyl-transferase
2.20E-13
5.20E-13
7.70E-09
WP_003946612.1 15901 15427 - 157PF00583
PF13508
PF13673
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
3.30E-13
3.40E-09
4.40E-06
WP_003946613.1 16126 16642 + 171PF01625PMSRPeptide methionine sulfoxide reductase2.60E-56
WP_175509444.1 18526 16741 - 594PF00005
PF00664
PF13191
PF02463
PF06414
ABC_tran
ABC_membrane
AAA_16
SMC_N
Zeta_toxin
ABC transporter
ABC transporter transmembrane region
AAA ATPase domain
RecF/RecN/SMC N terminal domain
Zeta toxin
1.70E-26
7.50E-10
7.80E-05
8.00E-05
8.20E-04
WP_175509445.1 20268 18522 - 581PF00005
PF00664
PF02463
PF13304
PF13401
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_22
ABC transporter
ABC transporter transmembrane region
RecF/RecN/SMC N terminal domain
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
5.20E-32
8.40E-12
9.20E-06
1.70E-04
2.60E-04
WP_071330083.1 21634 20326 - 435NO PFAM MATCH---
WP_071330084.1 23016 21648 - 455PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-35
WP_175509446.1 24539 23012 - 508PF02129
PF08530
PF00326
Peptidase_S15
PepX_C
Peptidase_S9
X-Pro dipeptidyl-peptidase (S15 family)
X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Prolyl oligopeptidase family
8.10E-40
1.20E-18
1.50E-04
WP_018470988.1 24535 25381 + 282INFERRED GENE---
WP_008409986.1 25657 25522 - 44NO PFAM MATCH---
WP_018894131.1 26562 25725 - 278PF00005
PF13304
PF02463
ABC_tran
AAA_21
SMC_N
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
1.70E-29
7.90E-07
1.60E-04
WP_217692536.1 27668 26684 - 327PF01032FecCDFecCD transport family8.30E-67
WP_217692535.1 28741 27736 - 334PF01032FecCDFecCD transport family6.70E-66
WP_031177395.1 29757 28767 - 329PF01497Peripla_BP_2Periplasmic binding protein1.10E-16
WP_254873933.1 29981 31178 + 398NO PFAM MATCH---

Results for WP_030698891.1 [Streptomyces sp. WAC00276] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_030698896.1 3946724 3947096 + 123NO PFAM MATCH---
WP_030698895.1 3947092 3948034 + 313PF00005
PF13304
PF13401
ABC_tran
AAA_21
AAA_22
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
1.70E-28
2.50E-14
1.10E-04
WP_030698894.1 3948030 3948828 + 265PF12698
PF12730
ABC2_membrane_3
ABC2_membrane_4
ABC-2 family transporter protein
ABC-2 family transporter protein
2.90E-05
1.00E-04
WP_008405005.1 3949167 3948891 - 91PF03621MbtHMbtH-like protein7.00E-30
WP_030698893.1 3950133 3949323 - 269PF12697
PF00561
PF12146
PF08386
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Abhydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
TAP-like protein
1.00E-19
7.80E-17
1.30E-09
7.00E-05
WP_047471013.1 3951594 3950169 - 474PF00171AldedhAldehyde dehydrogenase family1.10E-26
WP_023418725.1 3952488 3953436 + 315PF12840
PF01022
PF12802
PF13545
PF13412
HTH_20
HTH_5
MarR_2
HTH_Crp_2
HTH_24
Helix-turn-helix domain
Bacterial regulatory protein, arsR family
MarR family
Crp-like helix-turn-helix domain
Winged helix-turn-helix DNA-binding
3.00E-08
1.70E-06
3.20E-05
2.80E-04
3.00E-04
WP_175457485.1 3953671 3953848 + 58NO PFAM MATCH---
WP_030698891.1 3953844 3956136 + 763PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding5.90E-98
WP_047471011.1 3956281 3957544 + 420PF07730HisKA_3Histidine kinase3.00E-15
WP_023418729.1 3957586 3958198 + 203PF00072
PF00196
PF08281
PF13384
PF04545
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
Response regulator receiver domain
Bacterial regulatory proteins, luxR family
Sigma-70, region 4
Homeodomain-like domain
Sigma-70, region 4
1.80E-19
8.70E-18
6.60E-06
1.40E-05
1.50E-04
WP_030698889.1 3958891 3958207 - 227NO PFAM MATCH---
WP_247860761.1 3960602 3959063 - 512PF03703bPH_2Bacterial PH domain3.00E-43
WP_175457487.1 3961132 3960598 - 177PF03703bPH_2Bacterial PH domain1.20E-14
WP_030698886.1 3961163 3962306 + 380PF00346Complex1_49kDaRespiratory-chain NADH dehydrogenase, 49 Kd subunit2.40E-67
WP_018895486.1 3962443 3963489 + 348INFERRED GENE---
WP_030698884.1 3963678 3964884 + 401PF07730
PF02518
HisKA_3
HATPase_c
Histidine kinase
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
4.90E-22
3.70E-05

Results for WP_047468149.1 [Streptomyces odorifer] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_175458267.1 147814 145804 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.60E-77
WP_030699442.1 148697 147941 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.90E-29
1.80E-21
3.30E-05
WP_030699443.1 149689 148747 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
4.30E-28
1.80E-14
2.00E-05
1.40E-04
WP_217685787.1 150808 149740 - 355PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
4.00E-04
5.70E-04
WP_030699445.1 151923 150855 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.70E-95
WP_217685785.1 154655 151919 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.70E-46
WP_217685786.1 156256 154681 - 524PF00881NitroreductaseNitroreductase family3.80E-20
WP_030699448.1 158293 156340 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-80
WP_047468149.1 160505 158282 - 740NO PFAM MATCH---
WP_151168336.1 162398 160511 - 628PF03704
PF13191
PF00931
PF00486
PF00004
BTAD
AAA_16
NB-ARC
Trans_reg_C
AAA
Bacterial transcriptional activator domain
AAA ATPase domain
NB-ARC domain
Transcriptional regulatory protein, C terminal
ATPase family associated with various cellular activities (AAA)
1.00E-38
7.50E-11
1.90E-08
3.10E-08
5.20E-04
WP_175458266.1 162640 162406 - 77NO PFAM MATCH---
WP_217686255.1 163131 164691 + 519PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
1.90E-50
2.60E-11
6.10E-11
WP_217686219.1 165316 164710 - 201PF13977
PF00440
PF16859
TetR_C_6
TetR_N
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
4.50E-21
6.00E-10
7.90E-04
WP_217686256.1 165415 165946 + 176PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
5.20E-18
2.00E-06
WP_175510483.1 166773 166005 - 255PF05630NPP1Necrosis inducing protein (NPP1)2.40E-63
WP_217686224.1 166950 167574 + 207PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)1.60E-36
WP_175510482.1 168539 167570 - 322NO PFAM MATCH---

Results for WP_030699448.1 [Streptomyces sp. BI87] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_026048345.1 2487666 2487843 + 58NO PFAM MATCH---
WP_264491182.1 2489939 2487929 - 669PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.70E-77
WP_030699442.1 2490822 2490066 - 251PF01061
PF12698
PF12679
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_2
ABC-2 type transporter
ABC-2 family transporter protein
ABC-2 family transporter protein
4.90E-29
1.80E-21
3.30E-05
WP_264491183.1 2491813 2490871 - 313PF00005
PF13304
PF02463
PF13175
ABC_tran
AAA_21
SMC_N
AAA_15
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
RecF/RecN/SMC N terminal domain
AAA ATPase domain
7.00E-28
1.90E-14
1.90E-05
1.40E-04
WP_030699444.1 2492983 2491864 - 372PF02163
PF11667
Peptidase_M50
DUF3267
Peptidase family M50
Putative zincin peptidase
4.70E-04
8.20E-04
WP_030699445.1 2494047 2492979 - 355PF14028Lant_dehydr_CLantibiotic biosynthesis dehydratase C-term5.70E-95
WP_264491184.1 2496779 2494043 - 911PF04738Lant_dehydr_NLantibiotic dehydratase, N terminus3.80E-46
WP_030699447.1 2498413 2496805 - 535PF00881NitroreductaseNitroreductase family4.10E-20
WP_030699448.1 2500417 2498464 - 650PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding3.20E-80
WP_264491185.1 2502629 2500406 - 740NO PFAM MATCH---
WP_264491186.1 2504522 2502635 - 628PF03704
PF13191
PF00931
PF00486
PF00004
BTAD
AAA_16
NB-ARC
Trans_reg_C
AAA
Bacterial transcriptional activator domain
AAA ATPase domain
NB-ARC domain
Transcriptional regulatory protein, C terminal
ATPase family associated with various cellular activities (AAA)
6.80E-39
8.20E-11
1.90E-08
3.00E-08
5.20E-04
WP_030699451.1 2504764 2504530 - 77NO PFAM MATCH---
WP_030699452.1 2505222 2506815 + 530PF07690
PF00083
PF06609
MFS_1
Sugar_tr
TRI12
Major Facilitator Superfamily
Sugar (and other) transporter
Fungal trichothecene efflux pump (TRI12)
2.00E-50
2.70E-11
6.40E-11
WP_030699453.1 2507386 2506834 - 183PF13977
PF00440
PF16859
TetR_C_6
TetR_N
TetR_C_11
BetI-type transcriptional repressor, C-terminal
Bacterial regulatory proteins, tetR family
Tetracyclin repressor-like, C-terminal domain
2.80E-21
9.80E-10
6.40E-04
WP_030699454.1 2507506 2508070 + 187PF13302
PF00583
Acetyltransf_3
Acetyltransf_1
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) family
9.30E-19
2.30E-06
WP_226964305.1 2508897 2508129 - 255PF05630NPP1Necrosis inducing protein (NPP1)2.40E-63
WP_030699456.1 2509066 2509699 + 210PF00300His_Phos_1Histidine phosphatase superfamily (branch 1)6.50E-37

Results for WP_069728101.1 [Pantoea brenneri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_069728104.1 58756 57760 - 331PF02606
PF13439
PF03205
LpxK
Glyco_transf_4
MobB
Tetraacyldisaccharide-1-P 4'-kinase
Glycosyltransferase Family 4
Molybdopterin guanine dinucleotide synthesis protein B
1.40E-119
7.80E-04
8.80E-04
WP_046288418.1 60501 58752 - 582PF00664
PF00005
PF02463
PF00270
PF13191
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_16
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
AAA ATPase domain
2.50E-59
9.00E-35
2.90E-10
2.10E-06
3.70E-04
WP_069728186.1 62791 60535 - 751PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
2.00E-51
1.90E-19
7.20E-10
5.00E-05
WP_003849360.1 63291 63006 - 94PF00216
PF18291
Bac_DNA_binding
HU-HIG
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
1.10E-28
1.50E-07
WP_031376639.1 65047 63373 - 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.00E-98
7.30E-13
5.50E-07
WP_069728103.1 65843 65156 - 228PF02224
PF13189
PF13207
PF13238
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_17
AAA_18
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
9.70E-83
1.20E-07
2.80E-04
3.20E-04
8.50E-04
WP_069728102.1 67326 66039 - 428PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)1.00E-147
WP_031376642.1 68494 67408 - 361PF00266Aminotran_5Aminotransferase class-V1.30E-62
WP_069728101.1 68807 70571 + 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
2.60E-84
4.10E-67
WP_002211331.1 70940 71801 + 287INFERRED GENE---
WP_069728100.1 71872 74155 + 760PF02901
PF01228
PFL-like
Gly_radical
Pyruvate formate lyase-like
Glycine radical
1.20E-204
6.60E-44
WP_031376646.1 74321 75062 + 246PF04055
PF13353
PF13394
Radical_SAM
Fer4_12
Fer4_14
Radical SAM superfamily
4Fe-4S single cluster domain
4Fe-4S single cluster domain
1.70E-30
6.20E-17
6.00E-05
WP_069728099.1 76269 75117 - 383PF07690
PF06779
PF12832
PF00083
PF13347
MFS_1
MFS_4
MFS_1_like
Sugar_tr
MFS_2
Major Facilitator Superfamily
Uncharacterised MFS-type transporter YbfB
MFS_1 like family
Sugar (and other) transporter
MFS/sugar transport protein
5.80E-32
2.50E-10
6.50E-05
8.60E-05
1.20E-04
WP_069728098.1 77880 76587 - 430PF00587
PF02403
tRNA-synt_2b
Seryl_tRNA_N
tRNA synthetase class II core domain (G, H, P, S and T)
Seryl-tRNA synthetase N-terminal domain
2.00E-37
2.30E-33
WP_180217137.1 79260 77973 - 428PF12002
PF16193
PF00004
PF05496
PF07728
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
MgsA AAA+ ATPase C terminal
AAA C-terminal domain
ATPase family associated with various cellular activities (AAA)
Holliday junction DNA helicase RuvB P-loop domain
AAA domain (dynein-related subfamily)
7.90E-63
5.60E-24
9.80E-17
4.00E-15
3.30E-07
WP_031376650.1 79936 79324 - 203PF03548
PF09865
LolA
DUF2092
Outer membrane lipoprotein carrier protein LolA
Predicted periplasmic protein (DUF2092)
4.10E-57
1.80E-05
WP_069728096.1 83711 80117 - 1197PF01580
PF13491
PF17854
PF09397
PF12846
FtsK_SpoIIIE
FtsK_4TM
FtsK_alpha
FtsK_gamma
AAA_10
FtsK/SpoIIIE family
4TM region of DNA translocase FtsK/SpoIIIE
FtsK alpha domain
Ftsk gamma domain
AAA-like domain
4.90E-73
1.40E-43
5.30E-28
4.90E-27
3.60E-05

Results for WP_039859382.1 [Halomonas sp. IOP_14] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_083868797.1 206534 207176 + 213NO PFAM MATCH---
WP_009287351.1 207176 208109 + 310PF03956Lys_exportLysine exporter LysO3.30E-51
WP_027958055.1 208190 209420 + 409PF07670GateNucleoside recognition6.70E-11
WP_009287352.1 209583 210450 + 288PF00892EamAEamA-like transporter family8.90E-33
WP_039859381.1 211469 210455 - 337PF00710
PF17763
Asparaginase
Asparaginase_C
Asparaginase, N-terminal
Glutaminase/Asparaginase C-terminal domain
1.20E-57
2.70E-21
WP_009287354.1 212975 211511 - 487PF01235Na_Ala_sympSodium:alanine symporter family1.30E-150
WP_022522320.1 213376 213160 - 71PF11391DUF2798Protein of unknown function (DUF2798)2.80E-20
WP_009287355.1 213476 214379 + 300PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.70E-28
4.80E-17
WP_039859382.1 216642 214458 - 727PF02624
PF18381
PF02566
YcaO
YcaO_C
OsmC
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
OsmC-like protein
1.20E-74
1.20E-74
6.20E-09
WP_027958059.1 217456 216814 - 213PF00440TetR_NBacterial regulatory proteins, tetR family2.80E-13
WP_041158842.1 217537 218809 + 423PF00109
PF02801
PF00108
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Beta-ketoacyl synthase, N-terminal domain
Beta-ketoacyl synthase, C-terminal domain
Thiolase, N-terminal domain
2.10E-58
3.30E-31
1.70E-04
WP_039859383.1 219755 218870 - 294PF00561
PF12697
Abhydrolase_1
Abhydrolase_6
alpha/beta hydrolase fold
Alpha/beta hydrolase family
5.20E-19
2.30E-10
WP_009287358.1 220757 219872 - 294PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.20E-39
5.40E-17
WP_022522314.1 220879 221890 + 336PF13602
PF00107
PF08240
ADH_zinc_N_2
ADH_zinc_N
ADH_N
Zinc-binding dehydrogenase
Zinc-binding dehydrogenase
Alcohol dehydrogenase GroES-like domain
3.20E-22
4.30E-13
1.90E-08
WP_022522313.1 221998 222802 + 267PF13443
PF13560
HTH_26
HTH_31
Cro/C1-type HTH DNA-binding domain
Helix-turn-helix domain
1.20E-05
1.70E-05
WP_022522312.1 223419 222828 - 196PF16925
PF00440
TetR_C_13
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
8.20E-37
8.50E-15
WP_230803726.1 223829 225044 + 404PF13437
PF16576
HlyD_3
HlyD_D23
HlyD family secretion protein
Barrel-sandwich domain of CusB or HlyD membrane-fusion
1.20E-13
3.20E-11

Results for WP_003215159.1 [Pseudomonas fluorescens BBc6R8] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_003215174.1 2452880 2451842 - 345PF12697
PF00561
PF03403
PF01738
PF12146
Abhydrolase_6
Abhydrolase_1
PAF-AH_p_II
DLH
Hydrolase_4
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Platelet-activating factor acetylhydrolase, isoform II
Dienelactone hydrolase family
Serine aminopeptidase, S33
2.40E-08
2.70E-07
8.50E-07
1.30E-06
3.20E-05
WP_003215172.1 2453033 2454665 + 543PF00990
PF02743
PF00672
PF17853
GGDEF
dCache_1
HAMP
GGDEF_2
Diguanylate cyclase, GGDEF domain
Cache domain
HAMP domain
GGDEF-like domain
1.90E-46
4.80E-13
1.10E-04
4.00E-04
WP_003215170.1 2454787 2454964 + 58NO PFAM MATCH---
WP_003215168.1 2454980 2455601 + 206PF01810LysELysE type translocator8.60E-31
WP_003215166.1 2456308 2455603 - 234PF00440
PF09209
TetR_N
CecR_C
Bacterial regulatory proteins, tetR family
HTH-type transcriptional dual regulator CecR, C-terminal domain
9.10E-17
1.90E-10
WP_003215164.1 2456407 2457520 + 370PF16576
PF13437
PF13533
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD family secretion protein
Biotin-lipoyl like
2.20E-19
1.80E-16
5.70E-13
WP_003215162.1 2457512 2459093 + 526PF07690
PF06609
MFS_1
TRI12
Major Facilitator Superfamily
Fungal trichothecene efflux pump (TRI12)
1.20E-41
2.80E-07
WP_003215160.1 2459089 2460511 + 473PF02321OEPOuter membrane efflux protein2.00E-48
WP_003215159.1 2462853 2460657 - 731PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.40E-74
1.50E-72
2.60E-08
WP_003215156.1 2463761 2462954 - 268PF12697
PF00561
PF12146
PF07224
PF06028
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Chlorophyllase
DUF915
Alpha/beta hydrolase family
alpha/beta hydrolase fold
Serine aminopeptidase, S33
Chlorophyllase
Alpha/beta hydrolase of unknown function (DUF915)
5.30E-19
9.40E-18
2.60E-09
2.00E-06
2.10E-06
WP_003215155.1 2463946 2464582 + 211PF13419
PF00702
PF13242
PF13344
HAD_2
Hydrolase
Hydrolase_like
Hydrolase_6
Haloacid dehalogenase-like hydrolase
haloacid dehalogenase-like hydrolase
HAD-hyrolase-like
Haloacid dehalogenase-like hydrolase
1.00E-09
4.30E-09
6.20E-06
9.90E-04
WP_003215152.1 2465528 2464643 - 294PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
1.60E-34
8.20E-18
WP_003215150.1 2465640 2466573 + 310PF01118Semialdhyde_dhSemialdehyde dehydrogenase, NAD binding domain2.80E-12
WP_003215148.1 2467687 2466556 - 376PF06441
PF00561
EHN
Abhydrolase_1
Epoxide hydrolase N terminus
alpha/beta hydrolase fold
1.50E-27
2.30E-12
WP_003215146.1 2467809 2468691 + 293PF03466
PF00126
PF13936
PF13542
LysR_substrate
HTH_1
HTH_38
HTH_Tnp_ISL3
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
Helix-turn-helix domain
Helix-turn-helix domain of transposase family ISL3
3.10E-40
4.50E-17
3.50E-04
6.40E-04
WP_003215144.1 2469076 2468707 - 122NO PFAM MATCH---
WP_003215142.1 2469197 2469734 + 178PF13238
PF13671
PF01712
PF01202
PF13521
AAA_18
AAA_33
dNK
SKI
AAA_28
AAA domain
AAA domain
Deoxynucleoside kinase
Shikimate kinase
AAA domain
5.30E-06
1.00E-05
1.40E-05
8.10E-05
3.60E-04

Results for WP_017127194.1 [Pseudomonas gingeri] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_103032875.1 1134004 1134754 + 249PF12706
PF00753
Lactamase_B_2
Lactamase_B
Beta-lactamase superfamily domain
Metallo-beta-lactamase superfamily
1.40E-18
3.40E-06
WP_017127187.1 1135641 1134696 - 314PF03466
PF00126
LysR_substrate
HTH_1
LysR substrate binding domain
Bacterial regulatory helix-turn-helix protein, lysR family
5.40E-40
1.90E-22
WP_103032874.1 1135808 1136819 + 336PF00248Aldo_ket_redAldo/keto reductase family3.90E-49
WP_017127189.1 1137072 1137870 + 265PF13561
PF00106
PF08659
adh_short_C2
adh_short
KR
Enoyl-(Acyl carrier protein) reductase
short chain dehydrogenase
KR domain
2.90E-39
2.20E-35
3.00E-05
WP_042935754.1 1137890 1138307 + 138PF10604
PF03364
Polyketide_cyc2
Polyketide_cyc
Polyketide cyclase / dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport
2.40E-25
6.20E-04
WP_017127191.1 1138407 1139076 + 222PF00005
PF13304
PF13401
PF13191
PF13555
ABC_tran
AAA_21
AAA_22
AAA_16
AAA_29
ABC transporter
AAA domain, putative AbiEii toxin, Type IV TA system
AAA domain
AAA ATPase domain
P-loop containing region of AAA domain
4.00E-32
1.30E-04
1.50E-04
1.70E-04
3.80E-04
WP_017127192.1 1139072 1141562 + 829PF02687
PF12704
FtsX
MacB_PCD
FtsX-like permease family
MacB-like periplasmic core domain
3.90E-20
5.60E-08
WP_042935755.1 1141551 1142631 + 359PF07143
PF17186
CrtC
Lipocalin_9
CrtC N-terminal lipocalin domain
Lipocalin-like domain
5.40E-54
6.50E-41
WP_017127194.1 1142753 1144958 + 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
5.10E-74
7.10E-71
3.50E-08
WP_246356615.1 1145248 1145599 + 116NO PFAM MATCH---
WP_083875383.1 1146516 1147152 + 211PF08210APOBEC_NAPOBEC-like N-terminal domain4.80E-08
WP_017127197.1 1148823 1147521 - 433PF07690
PF03137
PF06779
MFS_1
OATP
MFS_4
Major Facilitator Superfamily
Organic Anion Transporter Polypeptide (OATP) family
Uncharacterised MFS-type transporter YbfB
6.80E-64
5.80E-07
8.80E-04
WP_017127198.1 1150048 1149085 - 320PF00392
PF07729
PF07848
PF13545
GntR
FCD
PaaX
HTH_Crp_2
Bacterial regulatory proteins, gntR family
FCD domain
PaaX-like protein
Crp-like helix-turn-helix domain
3.20E-18
2.00E-16
4.60E-05
4.60E-04
WP_020289342.1 1150090 1151407 + 439INFERRED GENE---
WP_042935766.1 1151757 1154364 + 868PF00330
PF00694
Aconitase
Aconitase_C
Aconitase family (aconitate hydratase)
Aconitase C-terminal domain
7.50E-146
6.10E-35
WP_017127203.1 1154395 1155544 + 382PF04303PrpFPrpF protein2.30E-155
WP_245223033.1 1155622 1156849 + 408PF10282
PF08450
Lactonase
SGL
Lactonase, 7-bladed beta-propeller
SMP-30/Gluconolactonase/LRE-like region
1.60E-106
1.20E-06

Results for WP_038482815.1 [Cedecea sp. P7760] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_038482815.1 2156 392 - 587PF02624
PF18381
YcaO
YcaO_C
YcaO cyclodehydratase, ATP-ad Mg2+-binding
YcaO cyclodehydratase C-terminal domain
1.00E-81
4.10E-68
WP_038474040.1 2463 3549 + 361PF00266Aminotran_5Aminotransferase class-V7.10E-68
WP_176981376.1 3626 4910 + 427PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)2.00E-148
WP_038474038.1 5102 5786 + 227PF02224
PF13189
PF13238
PF13207
PF00005
Cytidylate_kin
Cytidylate_kin2
AAA_18
AAA_17
ABC_tran
Cytidylate kinase
Cytidylate kinase-like family
AAA domain
AAA domain
ABC transporter
7.10E-85
2.90E-07
2.80E-04
8.20E-04
9.60E-04
WP_038474035.1 5909 7583 + 557PF00575
PF17092
PF13509
S1
PCB_OB
S1_2
S1 RNA binding domain
Penicillin-binding protein OB-like domain
S1 domain
2.30E-97
8.20E-12
1.90E-07
WP_008461182.1 7698 7983 + 94PF00216
PF18291
PF18175
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Bacterial DNA-binding protein
HU domain fused to wHTH, Ig, or Glycine-rich motif
CCDC81-like prokaryotic HU domain 2
4.40E-29
8.10E-08
2.30E-04
WP_218167012.1 8151 10452 + 766PF03772
PF00753
PF13567
PF12706
Competence
Lactamase_B
DUF4131
Lactamase_B_2
Competence protein
Metallo-beta-lactamase superfamily
Domain of unknown function (DUF4131)
Beta-lactamase superfamily domain
8.20E-50
7.70E-20
1.40E-04
2.80E-04
WP_176981332.1 10489 12238 + 582PF00664
PF00005
PF02463
PF00270
PF06414
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
DEAD/DEAH box helicase
Zeta toxin
2.10E-57
1.10E-34
4.20E-10
8.10E-07
9.50E-06
WP_176981333.1 12234 13218 + 327PF02606
PF13439
LpxK
Glyco_transf_4
Tetraacyldisaccharide-1-P 4'-kinase
Glycosyltransferase Family 4
1.00E-114
6.80E-04

Results for WP_016970166.1 [Pseudomonas tolaasii] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_016970174.1 180231 179271 - 319PF00561
PF12697
PF12146
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
alpha/beta hydrolase fold
Alpha/beta hydrolase family
Serine aminopeptidase, S33
1.70E-29
3.10E-17
9.40E-10
WP_016970173.1 180913 180358 - 184PF00857IsochorismataseIsochorismatase family2.00E-34
WP_016970172.1 182249 180947 - 433PF01266
PF12831
PF00890
PF01946
PF07992
DAO
FAD_oxidored
FAD_binding_2
Thi4
Pyr_redox_2
FAD dependent oxidoreductase
FAD dependent oxidoreductase
FAD binding domain
Thi4 family
Pyridine nucleotide-disulphide oxidoreductase
2.50E-52
4.80E-08
4.60E-06
9.20E-06
1.40E-05
WP_016970171.1 182453 182297 - 51NO PFAM MATCH---
WP_016970170.1 183164 182522 - 213PF17923
PF00440
TetR_C_18
TetR_N
Tetracyclin repressor-like, C-terminal domain
Bacterial regulatory proteins, tetR family
2.00E-32
2.00E-14
WP_016970169.1 183276 183933 + 218PF13578
PF01596
Methyltransf_24
Methyltransf_3
Methyltransferase domain
O-methyltransferase
4.30E-14
8.40E-13
WP_080520197.1 183956 185138 + 393PF07690MFS_1Major Facilitator Superfamily2.90E-26
WP_016970167.1 185745 185124 - 206PF01810LysELysE type translocator1.80E-29
WP_016970166.1 185880 188079 + 732PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
2.10E-73
2.00E-69
1.20E-07
WP_016970165.1 189363 188196 - 388PF01053Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzyme5.60E-149
WP_016970164.1 190736 189359 - 458PF00291
PF00571
PALP
CBS
Pyridoxal-phosphate dependent enzyme
CBS domain
9.90E-65
6.20E-15
WP_016970163.1 191735 190871 - 287PF00701DHDPSDihydrodipicolinate synthetase family5.90E-51
WP_080520560.1 192993 192018 - 324PF07859
PF00326
PF20434
PF10340
PF12146
Abhydrolase_3
Peptidase_S9
BD-FAE
Say1_Mug180
Hydrolase_4
alpha/beta hydrolase fold
Prolyl oligopeptidase family
BD-FAE
Steryl acetyl hydrolase
Serine aminopeptidase, S33
8.20E-48
5.60E-09
1.10E-07
2.20E-07
6.80E-05
WP_016970161.1 193782 193299 - 160PF069833-dmu-9_3-mt3-demethylubiquinone-9 3-methyltransferase2.00E-46
WP_016970160.1 194324 193862 - 153PF14477
PF14504
Mso1_C
CAP_assoc_N
Membrane-polarising domain of Mso1
CAP-associated N-terminal
2.10E-04
6.80E-04
WP_256346065.1 194896 194434 - 153PF12833
PF00165
HTH_18
HTH_AraC
Helix-turn-helix domain
Bacterial regulatory helix-turn-helix proteins, AraC family
4.40E-17
7.80E-11
J1G31_RS29750 194890 195364 + 158INFERRED GENE---

Results for WP_005160139.1 [Acinetobacter sp. SwsAc4] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_005160153.1 86016 86715 + 232PF08856DUF1826Protein of unknown function (DUF1826)5.50E-07
WP_005160150.1 87562 86719 - 280PF14088DUF4268Domain of unknown function (DUF4268)1.00E-21
WP_005160149.1 87696 88497 + 267INFERRED GENE---
WP_005160147.1 89040 88548 - 163PF01613Flavin_ReductFlavin reductase like domain2.60E-35
WP_005160145.1 90198 89169 - 342PF01717Meth_synt_2Cobalamin-independent synthase, Catalytic domain2.10E-37
WP_178882664.1 91221 90228 - 330PF08908MesXPutative oxygenase MesX9.20E-171
WP_218647840.1 93696 91608 - 695PF00593
PF07715
TonB_dep_Rec
Plug
TonB dependent receptor
TonB-dependent Receptor Plug Domain
1.50E-35
1.60E-09
WP_005046850.1 93906 93978 + 24INFERRED GENE---
WP_005160139.1 96253 94048 - 734PF18381
PF02624
PF02566
YcaO_C
YcaO
OsmC
YcaO cyclodehydratase C-terminal domain
YcaO cyclodehydratase, ATP-ad Mg2+-binding
OsmC-like protein
3.60E-76
3.70E-72
1.30E-08
WP_005160135.1 97251 96555 - 231PF00392
PF07729
GntR
FCD
Bacterial regulatory proteins, gntR family
FCD domain
2.90E-16
2.80E-15
WP_005160132.1 100868 97262 - 1201PF02626
PF02786
PF02682
PF00289
PF02785
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_N
Biotin_carb_C
Carboxyltransferase domain, subdomain A and B
Carbamoyl-phosphate synthase L chain, ATP binding domain
Carboxyltransferase domain, subdomain C and D
Biotin carboxylase, N-terminal domain
Biotin carboxylase C-terminal domain
1.30E-89
2.30E-63
8.00E-44
2.10E-39
4.30E-36
WP_005160128.1 102710 100883 - 608PF01425AmidaseAmidase1.90E-93
WP_076612260.1 102946 103191 + 81INFERRED GENE---
WP_004647755.1 103248 103551 + 101INFERRED GENE---
WP_005160127.1 104158 103573 - 194NO PFAM MATCH---
WP_005160126.1 105672 104802 - 289PF00753Lactamase_BMetallo-beta-lactamase superfamily4.50E-16
WP_005160125.1 106094 105683 - 136PF20398
PF04143
DUF6691
Sulf_transp
Family of unknown function (DUF6691)
Sulphur transport
1.20E-41
1.50E-04

Results for WP_025811782.1 [Bacillus paralicheniformis] back to top

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Architecture

1000 nucleotides

Link to nucleotide sequence

Accession start end direction length (aa) Pfam/HMM name description E-value
WP_025811792.1 1078701 1078206 - 164PF00583
PF13673
PF13508
PF13527
PF08445
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Acetyltransf_9
FR47
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
Acetyltransferase (GNAT) domain
FR47-like protein
1.10E-15
3.00E-13
1.40E-11
4.50E-08
1.30E-06
WP_023856532.1 1079748 1078836 - 303PF01522
PF10096
Polysacc_deac_1
DUF2334
Polysaccharide deacetylase
Uncharacterized protein conserved in bacteria (DUF2334)
8.60E-29
6.40E-04
WP_025811790.1 1080041 1080893 + 283PF01063Aminotran_4Amino-transferase class IV4.80E-54
WP_025811788.1 1082292 1080933 - 452PF03553Na_H_antiporterNa+/H+ antiporter family2.30E-65
WP_023856535.1 1082529 1083510 + 326PF01263
PF14486
Aldose_epim
DUF4432
Aldose 1-epimerase
Domain of unknown function (DUF4432)
4.60E-43
8.50E-05
WP_075213189.1 1083591 1083525 - 21PF16302DUF4944Domain of unknown function (DUF4944)1.90E-04
WP_025811786.1 1083797 1084508 + 236NO PFAM MATCH---
WP_023856536.1 1085524 1085047 - 158PF16302DUF4944Domain of unknown function (DUF4944)6.00E-54
WP_025811782.1 1087536 1085601 - 644PF02624YcaOYcaO cyclodehydratase, ATP-ad Mg2+-binding1.50E-86
WP_025811781.1 1089392 1087535 - 618NO PFAM MATCH---
WP_039072577.1 1090997 1090496 - 166PF00582UspUniversal stress protein family7.00E-33
WP_103749068.1 1091518 1093273 + 584PF00664
PF00005
PF02463
PF13191
PF00006
ABC_membrane
ABC_tran
SMC_N
AAA_16
ATP-synt_ab
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
ATP synthase alpha/beta family, nucleotide-binding domain
2.50E-46
1.20E-30
1.40E-05
7.70E-04
9.20E-04
WP_023856543.1 1093269 1095288 + 672PF00664
PF00005
PF02463
PF13191
PF03193
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
ABC transporter transmembrane region
ABC transporter
RecF/RecN/SMC N terminal domain
AAA ATPase domain
RsgA GTPase
2.50E-40
9.30E-33
7.90E-08
1.50E-05
5.50E-04
WP_229105357.1 1095934 1095307 - 208PF13460
PF05368
PF01118
PF01370
PF03435
NAD_binding_10
NmrA
Semialdhyde_dh
Epimerase
Sacchrp_dh_NADP
NAD(P)H-binding
NmrA-like family
Semialdehyde dehydrogenase, NAD binding domain
NAD dependent epimerase/dehydratase family
Saccharopine dehydrogenase NADP binding domain
1.30E-32
1.10E-07
3.00E-05
1.30E-04
1.50E-04
WP_020450769.1 1096098 1095954 - 47NO PFAM MATCH---
WP_020450770.1 1096472 1096268 - 67PF00269SASPSmall, acid-soluble spore proteins, alpha/beta type5.40E-21
WP_020450771.1 1096705 1096930 + 74NO PFAM MATCH---